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Cindy Nakatsu

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Eri Nasuno; Masaki J Fujita; Yoichi Kamagata; Nobutada Kimura; Cindy H Nakatsu; Satoshi Hanada
Phylogenetically novel LuxI/LuxR-type quorum sensing systems isolated using a metagenomic approach.
Kate E Stephen; Cindy H Nakatsu; Glen DePalma; Darren Homrighausen; Joseph Irudayaraj
Surface enhanced Raman spectroscopy (SERS) for the discrimination of Arthrobacter strains based on variations in cell surface composition.
Weidong Kong; Cindy H Nakatsu
Optimization of RNA extraction for PCR quantification of aromatic compound degradation genes.

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All Publications

2012: Eri Nasuno; Masaki J Fujita; Yoichi Kamagata; Nobutada Kimura; Cindy H Nakatsu; Satoshi Hanada
Phylogenetically novel LuxI/LuxR-type quorum sensing systems isolated using a metagenomic approach.
Applied and environmental microbiology 2012;78(22):8067-74.
2012: Kate E Stephen; Cindy H Nakatsu; Glen DePalma; Darren Homrighausen; Joseph Irudayaraj
Surface enhanced Raman spectroscopy (SERS) for the discrimination of Arthrobacter strains based on variations in cell surface composition.
The Analyst 2012;137(18):4280-6.
2010: Weidong Kong; Cindy H Nakatsu
Optimization of RNA extraction for PCR quantification of aromatic compound degradation genes.
Applied and environmental microbiology 2010;76(4):1282-4.
2010: Merlin W Ariefdjohan; Dennis A Savaiano; Cindy H Nakatsu
Comparison of DNA extraction kits for PCR-DGGE analysis of human intestinal microbial communities from fecal specimens.
Nutrition journal 2010;9():23.
2009: Peter S Kourtev; Cindy H Nakatsu; Allan Konopka
Inhibition of nitrate reduction by chromium (VI) in anaerobic soil microcosms.
Applied and environmental microbiology 2009;75(19):6249-57.
2009: Kristene L Henne; Joshua Turse; Carrie D Nicora; Mary S Lipton; Sandra L Tollaksen; Carl Lindberg; Gyorgy Babnigg; Carol S Giometti; Cindy H Nakatsu; Dorothea K Thompson; Allan Konopka
Global proteomic analysis of the chromate response in Arthrobacter sp. strain FB24.
Journal of proteome research 2009;8(4):1704-16.
2009: Jennifer Nebe; Brett R Baldwin; Raymond L Kassab; Loring Nies; Cindy H Nakatsu
Quantification of aromatic oxygenase genes to evaluate enhanced bioremediation by oxygen releasing materials at a gasoline-contaminated site.
Environmental science & technology 2009;43(6):2029-34.
2009: Kristene L Henne; Cindy H Nakatsu; Dorothea K Thompson; Allan Konopka
High-level chromate resistance in Arthrobacter sp. strain FB24 requires previously uncharacterized accessory genes.
BMC microbiology 2009;9():199.
2008: Kurt Jerke; Cindy H Nakatsu; Fred Beasley; Allan Konopka
Comparative analysis of eight Arthrobacter plasmids.
Plasmid 2008;59(2):73-85.
2008: Brett R Baldwin; Cindy H Nakatsu; Loring Nies
Enumeration of aromatic oxygenase genes to evaluate monitored natural attenuation at gasoline-contaminated sites.
Water research 2008;42(3):723-31.
2007: Jinxia Liu; Linda S Lee; Loring F Nies; Cindy H Nakatsu; Ronald F Turcot
Biotransformation of 8:2 fluorotelomer alcohol in soil and by soil bacteria isolates.
Environmental science & technology 2007;41(23):8024-30.
2007: Allan Konopka; Militza Carrero-Colon; Cindy H Nakatsu
Community dynamics and heterogeneities in mixed bacterial communities subjected to nutrient periodicities.
Environmental microbiology 2007;9(6):1584-90.
2006: Márta Vargha; Zoltán Takáts; Allan Konopka; Cindy H Nakatsu
Optimization of MALDI-TOF MS for strain level differentiation of Arthrobacter isolates.
Journal of microbiological methods 2006;66(3):399-409.
2006: Militza Carrero-Colón; Cindy H Nakatsu; Allan Konopka
Microbial community dynamics in nutrient-pulsed chemostats.
FEMS microbiology ecology 2006;57(1):1-8.
2006: Militza Carrero-Colón; Cindy H Nakatsu; Allan Konopka
Effect of nutrient periodicity on microbial community dynamics.
Applied and environmental microbiology 2006;72(5):3175-83.
2006: Cindy H Nakatsu; Krassimira R Hristova; Satoshi Hanada; Xian-Ying Meng; Jessica R Hanson; Kate M Scow; Yoichi Kamagata
Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria.
International journal of systematic and evolutionary microbiology 2006;56(Pt 5):983-9.
2006: Joanna M Becker; Tim Parkin; Cindy H Nakatsu; Jayson D Wilbur; Allan Konopka
Bacterial activity, community structure, and centimeter-scale spatial heterogeneity in contaminated soil.
Microbial ecology 2006;51(2):220-31.
2006: Janet Joynt; Marianne Bischoff; Ronald F Turco; Allan Konopka; Cindy H Nakatsu
Microbial community analysis of soils contaminated with lead, chromium and petroleum hydrocarbons.
Microbial ecology 2006;51(2):209-19.
2006: Peter S Kourtev; Cindy H Nakatsu; Allan Konopka
Responses of the anaerobic bacterial community to addition of organic C in chromium(VI)- and iron(III)-amended microcosms.
Applied and environmental microbiology 2006;72(1):628-37.
2005: Cindy H Nakatsu; Nadia Carmosini; Brett R Baldwin; Federico Beasley; Peter Kourtev; Allan Konopka
Soil microbial community responses to additions of organic carbon substrates and heavy metals (Pb and Cr).
Applied and environmental microbiology 2005;71(12):7679-89.
2005: Yadilka Maldonado; Jennifer C Fiser; Cindy H Nakatsu; Arun K Bhunia
Cytotoxicity potential and genotypic characterization of Escherichia coli isolates from environmental and food sources.
Applied and environmental microbiology 2005;71(4):1890-8.
2005: T H Lee; S Kurata; Cindy H Nakatsu; Yoichi Kamagata
Molecular analysis of bacterial community based on 16S rDNA and functional genes in activated sludge enriched with 2,4-dichlorophenoxyacetic acid (2,4-D) under different cultural conditions.
Microbial ecology 2005;49(1):151-62.
2004: Matthew B Mesarch; Cindy H Nakatsu; Loring Nies
Bench-scale and field-scale evaluation of catechol 2,3-dioxygenase specific primers for monitoring BTX bioremediation.
Water research 2004;38(5):1281-8.
2003: Kerry J Ritter; Ethan Carruthers; C Andrew Carson; Rudolph D Ellender; Valerie J Harwood; Kyle Kingsley; Cindy H Nakatsu; Michael Sadowsky; Brian Shear; Brian West; John E Whitlock; Bruce A Wiggins; Jayson D Wilbur
Assessment of statistical methods used in library-based approaches to microbial source tracking.
Journal of water and health 2003;1(4):209-23.
2003: Samuel P Myoda; C Andrew Carson; Jeffry J Fuhrmann; Byoung-Kwon Hahm; Peter G Hartel; Helen Yampara-Lquise; LeeAnn Johnson; Robin L Kuntz; Cindy H Nakatsu; Michael J Sadowsky; Mansour Samadpour
Comparison of genotypic-based microbial source tracking methods requiring a host origin database.
Journal of water and health 2003;1(4):167-80.
2003: Brett R Baldwin; Cindy H Nakatsu; Loring Nies
Detection and enumeration of aromatic oxygenase genes by multiplex and real-time PCR.
Applied and environmental microbiology 2003;69(6):3350-8.
2003: Byoung-Kwon Hahm; Yadilka Maldonado; Edgar Schreiber; Arun K Bhunia; Cindy H Nakatsu
Subtyping of foodborne and environmental isolates of Escherichia coli by multiplex-PCR, rep-PCR, PFGE, ribotyping and AFLP.
Journal of microbiological methods 2003;53(3):387-99.
2003: K C Davis; Cindy H Nakatsu; Ronald F Turco; S D Weagant; Arun K Bhunia
Analysis of environmental Escherichia coli isolates for virulence genes using the TaqMan PCR system.
Journal of applied microbiology 2003;95(3):612-20.
2002: Allan Konopka; Taissiia Zakharova; Cindy H Nakatsu
Effect of starvation length upon microbial activity in a biomass recycle reactor.
Journal of industrial microbiology & biotechnology 2002;29(5):286-91.
2002: Timothy M LaPara; Taissiia Zakharova; Cindy H Nakatsu; Allan Konopka
Functional and structural adaptations of bacterial communities growing on particulate substrates under stringent nutrient limitation.
Microbial ecology 2002;44(4):317-26.
2002: Patrick Curtis; Cindy H Nakatsu; Allan Konopka
Aciduric Proteobacteria isolated from pH 2.9 soil.
Archives of microbiology 2002;178(1):65-70.
2002: J D Wilbur; J K Ghosh; Cindy H Nakatsu; S M Brouder; Rebecca W Doerge
Variable selection in high-dimensional multivariate binary data with application to the analysis of microbial community DNA fingerprints.
Biometrics 2002;58(2):378-86.
2002: Christine A Morgan; Andre Hudson; Allan Konopka; Cindy H Nakatsu
Analyses of microbial activity in biomass-recycle reactors using denaturing gradient gel electrophoresis of 16S rDNA and 16S rRNA PCR products.
Canadian journal of microbiology 2002;48(4):333-41.
2002: Timothy M LaPara; Cindy H Nakatsu; Lisa M Pantea; James E Alleman
Stability of the bacterial communities supported by a seven-stage biological process treating pharmaceutical wastewater as revealed by PCR-DGGE.
Water research 2002;36(3):638-46.
2001: Timothy M LaPara; Cindy H Nakatsu; Lisa M Pantea; James E Alleman
Aerobic biological treatment of a pharmaceutical wastewater: effect of temperature on cod removal and bacterial community development.
Water research 2001;35(18):4417-25.
2001: W V Sigler; Cindy H Nakatsu; Z J Reicher; Ronald F Turco
Fate of the biological control agent Pseudomonas aureofaciens TX-1 after application to turfgrass.
Applied and environmental microbiology 2001;67(8):3542-8.
2001: Timothy M LaPara; Allan Konopka; Cindy H Nakatsu; James E Alleman
Thermophilic aerobic treatment of a synthetic wastewater in a membrane-coupled bioreactor.
Journal of industrial microbiology & biotechnology 2001;26(4):203-9.
2000: Timothy M LaPara; Cindy H Nakatsu; Lisa M Pantea; James E Alleman
Phylogenetic analysis of bacterial communities in mesophilic and thermophilic bioreactors treating pharmaceutical wastewater.
Applied and environmental microbiology 2000;66(9):3951-9.
2000: R Ramakrishnan; Daniel R Suiter; Cindy H Nakatsu; Gary W Bennett
Feeding inhibition and mortality in Reticulitermes flavipes (Isoptera: Rhinotermitidae) after exposure to imidacloprid-treated soils.
Journal of economic entomology 2000;93(2):422-8.
2000: Matthew B Mesarch; Cindy H Nakatsu; Loring Nies
Development of catechol 2,3-dioxygenase-specific primers for monitoring bioremediation by competitive quantitative PCR.
Applied and environmental microbiology 2000;66(2):678-83.