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Krishna Niyogi

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Publications

TOP 3
Deqiang Duanmu; Sean Gallaher; Arthur R Grossman; Shelley S Martin; Sabeeha S Merchant; Krishna K Niyogi; Matteo Pellegrini; Nathan C Rockwell; Wenqiang Yang; David Casero; Rachel M Dent; J Clark Lagarias
Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival.
Guillaume Allorent; Cécile Breyton; Pierre Cardol; Fabrice Franck; Jacqueline Girard-Bascou; Anja Krieger-Liszkay; Marcel Kuntz; Jun Minagawa; Krishna K Niyogi; Graham Peers; Dimitris Petroutsos; Thomas Roach; Daphné Seigneurin-Berny; Ryutaro Tokutsu; Francis-André Wollman; Giovanni Finazzi
A dual strategy to cope with high light in Chlamydomonas reinhardtii.
Rosanna Caliandro; Bernd Kastenholz; Zhirong Li; Kerstin A Nagel; Krishna K Niyogi; Barry J Pogson; Ulrich Schurr; Roberto Bassi; Shizue Matsubara
Effects of altered α- and β-branch carotenoid biosynthesis on photoprotection and whole-plant acclimation of Arabidopsis to photo-oxidative stress.

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All Publications

2013: Deqiang Duanmu; Sean Gallaher; Arthur R Grossman; Shelley S Martin; Sabeeha S Merchant; Krishna K Niyogi; Matteo Pellegrini; Nathan C Rockwell; Wenqiang Yang; David Casero; Rachel M Dent; J Clark Lagarias
Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(9):3621-6.
2013: Guillaume Allorent; Cécile Breyton; Pierre Cardol; Fabrice Franck; Jacqueline Girard-Bascou; Anja Krieger-Liszkay; Marcel Kuntz; Jun Minagawa; Krishna K Niyogi; Graham Peers; Dimitris Petroutsos; Thomas Roach; Daphné Seigneurin-Berny; Ryutaro Tokutsu; Francis-André Wollman; Giovanni Finazzi
A dual strategy to cope with high light in Chlamydomonas reinhardtii.
The Plant cell 2013;25(2):545-57.
2013: Rosanna Caliandro; Bernd Kastenholz; Zhirong Li; Kerstin A Nagel; Krishna K Niyogi; Barry J Pogson; Ulrich Schurr; Roberto Bassi; Shizue Matsubara
Effects of altered α- and β-branch carotenoid biosynthesis on photoprotection and whole-plant acclimation of Arabidopsis to photo-oxidative stress.
Plant, cell & environment 2013;36(2):438-53.
2012: Julia Zaks; Kapil Amarnath; David M Kramer; Krishna K Niyogi; Graham R Fleming
A kinetic model of rapidly reversible nonphotochemical quenching.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(39):15757-62.
2012: Kapil Amarnath; Krishna K Niyogi; Samuel D Park; Julia Zaks; Graham R Fleming
Fluorescence lifetime snapshots reveal two rapidly reversible mechanisms of photoprotection in live cells of Chlamydomonas reinhardtii.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(22):8405-10.
2012: Beat B Fischer; ShihYau Grace Huang; Andreas Koller; Heidi K Ledford; Sabeeha S Merchant; David Casero; Rik I L Eggen; Matteo Pellegrini; Setsuko Wakao; Krishna K Niyogi
SINGLET OXYGEN RESISTANT 1 links reactive electrophile signaling to singlet oxygen acclimation in Chlamydomonas reinhardtii.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(20):E1302-11.
2012: Phoi T Tran; Rachel M Dent; Subhajit Poddar; Marina N Sharifi; Krishna K Niyogi
Intragenic enhancers and suppressors of phytoene desaturase mutations in Chlamydomonas reinhardtii.
PloS one 2012;7(8):e42196.
2011: Matthew D Brooks; Krishna K Niyogi
Use of a pulse-amplitude modulated chlorophyll fluorometer to study the efficiency of photosynthesis in Arabidopsis plants.
Methods in molecular biology (Clifton, N.J.) 2011;775():299-310.
2010: Hou-Sung Jung; Krishna K Niyogi
Mutations in Arabidopsis YCF20-like genes affect thermal dissipation of excess absorbed light energy.
Planta 2010;231(4):923-37.
2010: Beat B Fischer; Rik I L Eggen; Krishna K Niyogi
Characterization of singlet oxygen-accumulating mutants isolated in a screen for altered oxidative stress response in Chlamydomonas reinhardtii.
BMC plant biology 2010;10():279.
2010: Hou-Sung Jung; Yuki Okegawa; Patrick M Shih; Elizabeth Kellogg; Salah E Abdel-Ghany; Marinus Pilon; Kimmen Sjölander; Toshiharu Shikanai; Krishna K Niyogi
Arabidopsis thaliana PGR7 encodes a conserved chloroplast protein that is necessary for efficient photosynthetic electron transport.
PloS one 2010;5(7):e11688.
2009: Christopher M Cohu; Salah E Abdel-Ghany; Kathryn A Gogolin Reynolds; Alexander M Onofrio; Jared R Bodecker; Jeffrey A Kimbrel; Krishna K Niyogi; Marinus Pilon
Copper delivery by the copper chaperone for chloroplast and cytosolic copper/zinc-superoxide dismutases: regulation and unexpected phenotypes in an Arabidopsis mutant.
Molecular plant 2009;2(6):1336-50.
2009: Anchalee Sirikhachornkit; Jai W Shin; Irene Baroli; Krishna K Niyogi
Replacement of alpha-tocopherol by beta-tocopherol enhances resistance to photooxidative stress in a xanthophyll-deficient strain of Chlamydomonas reinhardtii.
Eukaryotic cell 2009;8(11):1648-57.
2009: Benjamin L Gutman; Krishna K Niyogi
Evidence for base excision repair of oxidative DNA damage in chloroplasts of Arabidopsis thaliana.
The Journal of biological chemistry 2009;284(25):17006-12.
2009: Zhirong Li; Tae Kyu Ahn; Thomas J Avenson; Matteo Ballottari; Jeffrey A Cruz; David M Kramer; Roberto Bassi; Graham R Fleming; Jay D Keasling; Krishna K Niyogi
Lutein accumulation in the absence of zeaxanthin restores nonphotochemical quenching in the Arabidopsis thaliana npq1 mutant.
The Plant cell 2009;21(6):1798-812.
2009: Hou-Sung Jung; Krishna K Niyogi
Quantitative genetic analysis of thermal dissipation in Arabidopsis.
Plant physiology 2009;150(2):977-86.
2009: Thomas J Avenson; Tae Kyu Ahn; Krishna K Niyogi; Matteo Ballottari; Roberto Bassi; Graham R Fleming
Lutein can act as a switchable charge transfer quencher in the CP26 light-harvesting complex.
The Journal of biological chemistry 2009;284(5):2830-5.
2009: Zhirong Li; Setsuko Wakao; Beat B Fischer; Krishna K Niyogi
Sensing and responding to excess light.
Annual review of plant biology 2009;60():239-60.
2008: Yuan-Chung Cheng; Tae Kyu Ahn; Thomas J Avenson; Donatas Zigmantas; Krishna K Niyogi; Matteo Ballottari; Roberto Bassi; Graham R Fleming
Kinetic modeling of charge-transfer quenching in the CP29 minor complex.
The journal of physical chemistry. B 2008;112(42):13418-23.
2008: Tae Kyu Ahn; Thomas J Avenson; Matteo Ballottari; Yuan-Chung Cheng; Krishna K Niyogi; Roberto Bassi; Graham R Fleming
Architecture of a charge-transfer state regulating light harvesting in a plant antenna protein.
Science (New York, N.Y.) 2008;320(5877):794-7.
2008: Graham Peers; Krishna K Niyogi
Pond scum genomics: the genomes of Chlamydomonas and Ostreococcus.
The Plant cell 2008;20(3):502-7.
2008: Thomas J Avenson; Tae Kyu Ahn; Donatas Zigmantas; Krishna K Niyogi; Zhirong Li; Matteo Ballottari; Roberto Bassi; Graham R Fleming
Zeaxanthin radical cation formation in minor light-harvesting complexes of higher plant antenna.
The Journal of biological chemistry 2008;283(6):3550-8.
2007: Heidi K Ledford; Brian L Chin; Krishna K Niyogi
Acclimation to singlet oxygen stress in Chlamydomonas reinhardtii.
Eukaryotic cell 2007;6(6):919-30.
2006: Talila Golan; Patricia Müller-Moulé; Krishna K Niyogi
Photoprotection mutants of Arabidopsis thaliana acclimate to high light by increasing photosynthesis and specific antioxidants.
Plant, cell & environment 2006;29(5):879-87.
2005: Salah E Abdel-Ghany; Patricia Müller-Moulé; Krishna K Niyogi; Marinus Pilon; Toshiharu Shikanai
Two P-type ATPases are required for copper delivery in Arabidopsis thaliana chloroplasts.
The Plant cell 2005;17(4):1233-51.
2005: Rachel M Dent; Cat M Haglund; Brian L Chin; Marilyn C Kobayashi; Krishna K Niyogi
Functional genomics of eukaryotic photosynthesis using insertional mutagenesis of Chlamydomonas reinhardtii.
Plant physiology 2005;137(2):545-56.
2005: Nancy E Holt; Donatas Zigmantas; Leonas Valkunas; Xiao-Ping Li; Krishna K Niyogi; Graham R Fleming
Carotenoid cation formation and the regulation of photosynthetic light harvesting.
Science (New York, N.Y.) 2005;307(5708):433-6.
2005: Krishna K Niyogi; Xiao-Ping Li; Vanessa Rosenberg; Hou-Sung Jung
Is PsbS the site of non-photochemical quenching in photosynthesis?
Journal of experimental botany 2005;56(411):375-82.
2004: Sarah S McCarthy; Marilyn C Kobayashi; Krishna K Niyogi
White mutants of Chlamydomonas reinhardtii are defective in phytoene synthase.
Genetics 2004;168(3):1249-57.
2004: Heidi K Ledford; Irene Baroli; Jai W Shin; B B Fischer; Rik I L Eggen; Krishna K Niyogi
Comparative profiling of lipid-soluble antioxidants and transcripts reveals two phases of photo-oxidative stress in a xanthophyll-deficient mutant of Chlamydomonas reinhardtii.
Molecular genetics and genomics : MGG 2004;272(4):470-9.
2004: Nancy E Holt; Graham R Fleming; Krishna K Niyogi
Toward an understanding of the mechanism of nonphotochemical quenching in green plants.
Biochemistry 2004;43(26):8281-9.
2004: Benjamin L Gutman; Krishna K Niyogi
Chlamydomonas and Arabidopsis. A dynamic duo.
Plant physiology 2004;135(2):607-10.
2004: Xiao-Ping Li; Adam M Gilmore; Stefano Caffarri; Roberto Bassi; Talila Golan; David Kramer; Krishna K Niyogi
Regulation of photosynthetic light harvesting involves intrathylakoid lumen pH sensing by the PsbS protein.
The Journal of biological chemistry 2004;279(22):22866-74.
2004: Patricia Müller-Moulé; Talila Golan; Krishna K Niyogi
Ascorbate-deficient mutants of Arabidopsis grow in high light despite chronic photooxidative stress.
Plant physiology 2004;134(3):1163-72.
2004: Irene Baroli; Benjamin L Gutman; Heidi K Ledford; Jai W Shin; Brian L Chin; Michel Havaux; Krishna K Niyogi
Photo-oxidative stress in a xanthophyll-deficient mutant of Chlamydomonas.
The Journal of biological chemistry 2004;279(8):6337-44.
2003: Patricia Müller-Moulé; Michel Havaux; Krishna K Niyogi
Zeaxanthin deficiency enhances the high light sensitivity of an ascorbate-deficient mutant of Arabidopsis.
Plant physiology 2003;133(2):748-60.
2003: Toshiharu Shikanai; Patricia Müller-Moulé; Yuri Munekage; Krishna K Niyogi; Marinus Pilon
PAA1, a P-type ATPase of Arabidopsis, functions in copper transport in chloroplasts.
The Plant cell 2003;15(6):1333-46.
2003: Ying-Zhong Ma; Nancy E Holt; Xiao-Ping Li; Krishna K Niyogi; Graham R Fleming
Evidence for direct carotenoid involvement in the regulation of photosynthetic light harvesting.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(8):4377-82.
2003: Irene Baroli; An D Do; Tomoko Yamane; Krishna K Niyogi
Zeaxanthin accumulation in the absence of a functional xanthophyll cycle protects Chlamydomonas reinhardtii from photooxidative stress.
The Plant cell 2003;15(4):992-1008.
2002: Xiao-Ping Li; Patricia Muller-Moule; Adam M Gilmore; Krishna K Niyogi
PsbS-dependent enhancement of feedback de-excitation protects photosystem II from photoinhibition.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(23):15222-7.
2002: Xiao-Ping Li; Adam M Gilmore; Krishna K Niyogi
Molecular and global time-resolved analysis of a psbS gene dosage effect on pH- and xanthophyll cycle-dependent nonphotochemical quenching in photosystem II.
The Journal of biological chemistry 2002;277(37):33590-7.
2002: Dafna Elrad; Krishna K Niyogi; Arthur R Grossman
A major light-harvesting polypeptide of photosystem II functions in thermal dissipation.
The Plant cell 2002;14(8):1801-16.
2002: Eric Soupene; Natalie King; Eithne Feild; Phillip Liu; Krishna K Niyogi; Cheng-Han Huang; Sydney Kustu
Rhesus expression in a green alga is regulated by CO(2).
Proceedings of the National Academy of Sciences of the United States of America 2002;99(11):7769-73.
2002: Patricia Müller-Moulé; Patricia L Conklin; Krishna K Niyogi
Ascorbate deficiency can limit violaxanthin de-epoxidase activity in vivo.
Plant physiology 2002;128(3):970-7.
2001: Rachel M Dent; M Han; Krishna K Niyogi
Functional genomics of plant photosynthesis in the fast lane using Chlamydomonas reinhardtii.
Trends in plant science 2001;6(8):364-71.
2001: Juergen E W Polle; Krishna K Niyogi; Anastasios Melis
Absence of lutein, violaxanthin and neoxanthin affects the functional chlorophyll antenna size of photosystem-II but not that of photosystem-I in the green alga Chlamydomonas reinhardtii.
Plant & cell physiology 2001;42(5):482-91.
2001: P Müller; X P Li; Krishna K Niyogi
Non-photochemical quenching. A response to excess light energy.
Plant physiology 2001;125(4):1558-66.
2000: Krishna K Niyogi
Safety valves for photosynthesis.
Current opinion in plant biology 2000;3(6):455-60.
2000: Irene Baroli; Krishna K Niyogi
Molecular genetics of xanthophyll-dependent photoprotection in green algae and plants.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2000;355(1402):1385-94.
2000: Michel Havaux; J P Bonfils; Cornelius Lütz; Krishna K Niyogi
Photodamage of the photosynthetic apparatus and its dependence on the leaf developmental stage in the npq1 Arabidopsis mutant deficient in the xanthophyll cycle enzyme violaxanthin de-epoxidase.
Plant physiology 2000;124(1):273-84.
2000: Xiao-Ping Li; O Björkman; C Shih; Arthur R Grossman; M Rosenquist; S Jansson; Krishna K Niyogi
A pigment-binding protein essential for regulation of photosynthetic light harvesting.
Nature 2000;403(6768):391-5.
1999: Michel Havaux; Krishna K Niyogi
The violaxanthin cycle protects plants from photooxidative damage by more than one mechanism.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(15):8762-7.
1998: Barry J Pogson; Krishna K Niyogi; O Björkman; Dean DellaPenna
Altered xanthophyll compositions adversely affect chlorophyll accumulation and nonphotochemical quenching in Arabidopsis mutants.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(22):13324-9.
1998: Krishna K Niyogi; Arthur R Grossman; O Björkman
Arabidopsis mutants define a central role for the xanthophyll cycle in the regulation of photosynthetic energy conversion.
The Plant cell 1998;10(7):1121-34.
1997: Krishna K Niyogi; O Björkman; Arthur R Grossman
The roles of specific xanthophylls in photoprotection.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(25):14162-7.