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Jeffrey Bennetzen

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Rajiv K Parvathaneni; Ana C Pontaroli; Xiaomei Wu; Jeffrey L Bennetzen; Sebastien Faure; Vinod Jakkula; Nethra Nagarajappa; Francis K Padi; Katrien M Devos
Fine-mapping and identification of a candidate gene underlying the d2 dwarfing phenotype in pearl millet, Cenchrus americanus (L.) Morrone.
M C Estep; J D DeBarry; Jeffrey L Bennetzen
The dynamics of LTR retrotransposon accumulation across 25 million years of panicoid grass evolution.
Hao Wang; Jeffrey L Bennetzen
Centromere retention and loss during the descent of maize from a tetraploid ancestor.

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2013: Rajiv K Parvathaneni; Ana C Pontaroli; Xiaomei Wu; Jeffrey L Bennetzen; Sebastien Faure; Vinod Jakkula; Nethra Nagarajappa; Francis K Padi; Katrien M Devos
Fine-mapping and identification of a candidate gene underlying the d2 dwarfing phenotype in pearl millet, Cenchrus americanus (L.) Morrone.
G3 (Bethesda, Md.) 2013;3(3):563-72.
2013: M C Estep; J D DeBarry; Jeffrey L Bennetzen
The dynamics of LTR retrotransposon accumulation across 25 million years of panicoid grass evolution.
Heredity 2013;110(2):194-204.
2012: Hao Wang; Jeffrey L Bennetzen
Centromere retention and loss during the descent of maize from a tetraploid ancestor.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(51):21004-9.
2012: Qihui Zhu; Mulu Ayele; Srinivasa R Chaluvadi; Ansuya Jogi; Shavannor M Smith; Lixing Yang; Jeffrey L Bennetzen
High-throughput discovery of mutations in tef semi-dwarfing genes by next-generation sequencing analysis.
Genetics 2012;192(3):819-29.
2012: Daisuke Urano; Hao Wang; Jeffrey L Bennetzen; William Bradford; Janice C Jones; Melissa Matthews; Alan M Jones
G protein activation without a GEF in the plant kingdom.
PLoS genetics 2012;8(6):e1002756.
2012: Jeffrey L Bennetzen; Thomas P Brutnell; Shweta Deshpande; Kerrie Barry; Andrew N Doust; Matt Estep; Liang Feng; Jane Grimwood; Jennifer Hawkins; Uffe Hellsten; Jerry Jenkins; Elizabeth A Kellogg; Pinghua Li; Erika Lindquist; Margarita Mauro-Herrera; Therese Mitros; Olivier Panaud; Ryan Percifield; Ana C Pontaroli; Daniel Rokhsar; Pamela C Ronald; Jeremy Schmutz; Manoj Sharma; Rita Sharma; Jimmy Triplett; Gerald A Tuskan; Justin N Vaughn; Hao Wang; Lin Wang; Xuewen Wang; Xiaomei Wu; Xiaohan Yang; Chu-Yu Ye; Katrien M Devos
Reference genome sequence of the model plant Setaria.
Nature biotechnology 2012;30(6):555-61.
2012: Shavannor M Smith; Yinan Yuan; Andrew N Doust; Jeffrey L Bennetzen
Haplotype Analysis and Linkage Disequilibrium at Five Loci in Eragrostis tef.
G3 (Bethesda, Md.) 2012;2(3):407-19.
2012: Jian-Hong Xu; Jeffrey L Bennetzen; Joachim Messing
Dynamic gene copy number variation in collinear regions of grass genomes.
Molecular biology and evolution 2012;29(2):861-71.
2011: Eman K Al-Dous; Moneera Y Al-Jaber; Maryam E Al-Mahmoud; Vincent Arondel; Jeffrey L Bennetzen; Srinivasa Chaluvadi; Jeremy DeBarry; Binu George; Robert R Kruegger; John Ohlrogge; Ana C Pontaroli; Imad J Saie; Yasmeen M Salameh; Khaled M Suliman-Elmeer; Hao Wang; Eman K Al-Azwani; Joel A Malek
De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera).
Nature biotechnology 2011;29(6):521-7.
2011: Jo Ann Banks; Tomoaki Nishiyama; Mitsuyasu Hasebe; John L Bowman; Michael Gribskov; Claude dePamphilis; Victor A Albert; Naoki Aono; Tsuyoshi Aoyama; Barbara A Ambrose; Neil W Ashton; Michael J Axtell; Elizabeth Barker; Michael S Barker; Jeffrey L Bennetzen; Nicholas D Bonawitz; Clint Chapple; Chaoyang Cheng; Luiz Gustavo Guedes Correa; Michael Dacre; Jeremy DeBarry; Ingo Dreyer; Marek Elias; Eric M Engstrom; Mark Estelle; Liang Feng; Cédric Finet; Sandra K Floyd; Wolf B Frommer; Tomomichi Fujita; Lydia Gramzow; Michael Gutensohn; Jesper Harholt; Mitsuru Hattori; Alexander Heyl; Tadayoshi Hirai; Yuji Hiwatashi; Masaki Ishikawa; Mineko Iwata; Kenneth G Karol; Barbara Koehler; Uener Kolukisaoglu; Minoru Kubo; Tetsuya Kurata; Sylvie Lalonde; Kejie Li; Ying Li; Amy Litt; Eric Lyons; Gerard Manning; Takeshi Maruyama; Todd P Michael; Koji Mikami; Saori Miyazaki; Shin-ichi Morinaga; Takashi Murata; Bernd Mueller-Roeber; David R Nelson; Mari Obara; Yasuko Oguri; Richard G Olmstead; Naoko Onodera; Bent Larsen Petersen; Birgit Pils; Michael Prigge; Stefan A Rensing; Diego Mauricio Riaño-Pachón; Alison W Roberts; Yoshikatsu Sato; Henrik Vibe Scheller; Burkhard Schulz; Christian Schulz; Eugene V Shakirov; Nakako Shibagaki; Naoki Shinohara; Dorothy E Shippen; Iben Sørensen; Ryo Sotooka; Nagisa Sugimoto; Mamoru Sugita; Naomi Sumikawa; Milos Tanurdzic; Günter Theissen; Peter Ulvskov; Sachiko Wakazuki; Jing-Ke Weng; William W G T Willats; Daniel Wipf; Paul G Wolf; Lixing Yang; Andreas D Zimmer; Qihui Zhu; Therese Mitros; Uffe Hellsten; Dominique Loqué; Robert Otillar; Asaf Salamov; Jeremy Schmutz; Harris Shapiro; Erika Lindquist; Susan Lucas; Daniel Rokhsar; Igor V Grigoriev
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Science (New York, N.Y.) 2011;332(6032):960-3.
2011: Jeffrey L Bennetzen; Jian-Kang Zhu
Epigenetics of the epigenome.
Current opinion in plant biology 2011;14(2):113-5.
2011: damon lisch; Jeffrey L Bennetzen
Transposable element origins of epigenetic gene regulation.
Current opinion in plant biology 2011;14(2):156-61.
2011: Vladimir Shulaev; Daniel J Sargent; Ross N Crowhurst; Todd C Mockler; Otto Folkerts; Arthur L Delcher; Pankaj Jaiswal; Keithanne Mockaitis; Aaron Liston; Shrinivasrao P Mane; Paul Burns; Thomas M Davis; Janet P Slovin; Nahla Bassil; Roger Hellens; Clive Evans; Tim Harkins; Chinnappa Kodira; Brian Desany; Oswald R Crasta; Roderick V Jensen; Andrew C Allan; Todd P Michael; Joao Setubal; Jean-Marc Celton; D Jasper G Rees; Kelly P Williams; Sarah H Holt; Juan Jairo Ruiz Rojas; Mithu Chatterjee; Bo Liu; Herman Silva; Lee Meisel; Avital Adato; Sergei A Filichkin; Michela Troggio; Roberto Viola; Tia-Lynn Ashman; Hao Wang; Palitha Dharmawardhana; Justin Elser; Rajani Raja; Henry D Priest; Douglas W Bryant; Samuel E Fox; Scott A Givan; Larry J Wilhelm; Sushma Naithani; Alan Christoffels; David Y Salama; Jade Carter; Elena Lopez Girona; Anna Zdepski; Wenqin Wang; Randall A Kerstetter; Wilfried Schwab; Schuyler S Korban; Jahn Davik; Amparo Monfort; Beatrice Denoyes-Rothan; Pere Arus; Ron Mittler; Barry Flinn; Asaph Aharoni; Jeffrey L Bennetzen; Steven L Salzberg; Allan W Dickerman; Riccardo Velasco; Mark Borodovsky; Richard E Veilleux; Kevin M Folta
The genome of woodland strawberry (Fragaria vesca).
Nature genetics 2011;43(2):109-16.
2011: David G J Mann; Mitra Mazarei; Wayne A Parrott; Ryan J Percifield; Barbara J Artelt; Jeffrey L Bennetzen; Jason N Burris; Jennifer S Hawkins; Blake L Joyce; Zachary R King; Peter R LaFayette; Wusheng Liu; C Neal Stewart
Switchgrass (Panicum virgatum L.) polyubiquitin gene (PvUbi1 and PvUbi2) promoters for use in plant transformation.
BMC biotechnology 2011;11():74.
2010: P H Gleick; R M Adams; R M Amasino; E Anders; D J Anderson; W W Anderson; L E Anselin; M K Arroyo; B Asfaw; F J Ayala; A Bax; A J Bebbington; G Bell; M V L Bennett; Jeffrey L Bennetzen; M R Berenbaum; O B Berlin; P J Bjorkman; E Blackburn; J E Blamont; M R Botchan; J S Boyer; E A Boyle; D Branton; S P Briggs; W R Briggs; W J Brill; R J Britten; W S Broecker; J H Brown; P O Brown; A T Brunger; J Cairns; D E Canfield; S R Carpenter; J C Carrington; A R Cashmore; J C Castilla; A Cazenave; F S Chapin; A J Ciechanover; D E Clapham; W C Clark; R N Clayton; M D Coe; E M Conwell; E B Cowling; R M Cowling; C S Cox; R B Croteau; D M Crothers; P J Crutzen; G C Daily; G B Dalrymple; J L Dangl; S A Darst; D R Davies; M B Davis; Pietro De Camilli; C Dean; R S DeFries; J Deisenhofer; D P Delmer; E F DeLong; D J DeRosier; T O Diener; R Dirzo; J E Dixon; M J Donoghue; R F Doolittle; T Dunne; P R Ehrlich; S N Eisenstadt; T Eisner; K A Emanuel; S W Englander; W G Ernst; P G Falkowski; G Feher; J A Ferejohn; A Fersht; E H Fischer; R Fischer; K V Flannery; J Frank; P A Frey; I Fridovich; C Frieden; D J Futuyma; W R Gardner; C J R Garrett; W Gilbert; R B Goldberg; W H Goodenough; C S Goodman; M Goodman; Paul Greengard; S Hake; G Hammel; S Hanson; S C Harrison; S R Hart; D L Hartl; R Haselkorn; K Hawkes; J M Hayes; B Hille; T Hökfelt; J S House; M Hout; D M Hunten; I A Izquierdo; A T Jagendorf; D H Janzen; R Jeanloz; C S Jencks; W A Jury; H R Kaback; T Kailath; P Kay; S A Kay; D Kennedy; A Kerr; R C Kessler; G S Khush; S W Kieffer; P V Kirch; K Kirk; M G Kivelson; J P Klinman; A Klug; L Knopoff; H Kornberg; J E Kutzbach; J C Lagarias; K Lambeck; A Landy; C H Langmuir; B A Larkins; X T Le Pichon; R E Lenski; E B Leopold; S A Levin; M Levitt; G E Likens; J Lippincott-Schwartz; L Lorand; C O Lovejoy; M Lynch; A L Mabogunje; T F Malone; S Manabe; J Marcus; D S Massey; J C McWilliams; E Medina; H J Melosh; D J Meltzer; C D Michener; E L Miles; H A Mooney; P B Moore; F M M Morel; E S Mosley-Thompson; B Moss; W H Munk; N Myers; G B Nair; Jeremy Nathans; E W Nester; R A Nicoll; R P Novick; J F O'Connell; P E Olsen; N D Opdyke; G F Oster; E Ostrom; N R Pace; R T Paine; R D Palmiter; J Pedlosky; G A Petsko; G H Pettengill; S G Philander; D R Piperno; T D Pollard; P B Price; P A Reichard; B F Reskin; R E Ricklefs; R L Rivest; J D Roberts; A K Romney; M G Rossmann; D W Russell; W J Rutter; J A Sabloff; R Z Sagdeev; M D Sahlins; A Salmond; Joshua R Sanes; R Schekman; J Schellnhuber; D W Schindler; J Schmitt; S H Schneider; Vern L Schramm; R R Sederoff; C J Shatz; F Sherman; R L Sidman; K Sieh; E L Simons; B H Singer; M F Singer; B Skyrms; N H Sleep; B D Smith; S H Snyder; R R Sokal; C S Spencer; T A Steitz; K B Strier; T C Südhof; S S Taylor; J Terborgh; D H Thomas; L G Thompson; R T Tjian; M G Turner; S Uyeda; J W Valentine; J S Valentine; J L Van Etten; K E van Holde; M Vaughan; S Verba; P H von Hippel; D B Wake; A Walker; J E Walker; E B Watson; P J Watson; D Weigel; S R Wessler; M J West-Eberhard; T D White; W J Wilson; R V Wolfenden; J A Wood; G M Woodwell; H E Wright; C Wu; C Wunsch; M L Zoback
Climate change and the integrity of science.
Science (New York, N.Y.) 2010;328(5979):689-90.
2010: Thomas M Davis; Melanie E Shields; Qian Zhang; Denise Tombolato-Terzić; Jeffrey L Bennetzen; Ana C Pontaroli; Hao Wang; Qin Yao; Phillip SanMiguel; Kevin M Folta
An examination of targeted gene neighborhoods in strawberry.
BMC plant biology 2010;10():81.
2009: Zhixi Tian; Carene Rizzon; Jianchang Du; Liucun Zhu; Jeffrey L Bennetzen; Scott A Jackson; Brandon S Gaut; Jianxin Ma
Do genetic recombination and gene density shape the pattern of DNA elimination in rice long terminal repeat retrotransposons?
Genome research 2009;19(12):2221-30.
2009: Lixing Yang; Jeffrey L Bennetzen
Distribution, diversity, evolution, and survival of Helitrons in the maize genome.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(47):19922-7.
2009: Patrick S Schnable; Doreen Ware; Robert S Fulton; Joshua C Stein; Fusheng Wei; Shiran Pasternak; Chengzhi Liang; Jianwei Zhang; Lucinda Fulton; Tina A Graves; Patrick Minx; Amy Denise Reily; Laura Courtney; Scott S Kruchowski; Chad Tomlinson; Cindy Strong; Kim Delehaunty; Catrina Fronick; Bill Courtney; Susan M Rock; Eddie Belter; Feiyu Du; Kyung Kim; Rachel M Abbott; Marc Cotton; Andy Levy; Pamela Marchetto; Kerri Ochoa; Stephanie M Jackson; Barbara Gillam; Weizu Chen; Le Yan; Jamey Higginbotham; Marco Cardenas; Jason Waligorski; Elizabeth Applebaum; Lindsey Phelps; Jason Falcone; Krishna Kanchi; Thynn Thane; Adam Scimone; Nay Thane; Jessica Henke; Tom Wang; Jessica Ruppert; Neha Shah; Kelsi Rotter; Jennifer Hodges; Elizabeth Ingenthron; Matt Cordes; Sara Kohlberg; Jennifer Sgro; Brandon Delgado; Kelly Mead; Asif Chinwalla; Shawn Leonard; Kevin Crouse; Kristi Collura; Dave Kudrna; Jennifer Currie; Ruifeng He; Angelina Angelova; Shanmugam Rajasekar; Teri Mueller; Rene Lomeli; Gabriel Scara; Ara Ko; Krista Delaney; Marina Wissotski; Georgina Lopez; David Campos; Michele Braidotti; Elizabeth Ashley; Wolfgang Golser; HyeRan Kim; Seunghee Lee; Jinke Lin; Zeljko Dujmic; Woojin Kim; Jayson Talag; Andrea Zuccolo; Chuanzhu Fan; Aswathy Sebastian; Melissa Kramer; Lori Spiegel; Lidia Nascimento; Theresa Zutavern; Beth Miller; Claude Ambroise; Stephanie Muller; Will Spooner; Apurva Narechania; Liya Ren; Sharon Wei; Sunita Kumari; Ben Faga; Michael J Levy; Linda McMahan; Peter Van Buren; Matthew W Vaughn; Kai Ying; Cheng-Ting Yeh; Scott J Emrich; Yi Jia; Ananth Kalyanaraman; An-Ping Hsia; W Brad Barbazuk; Regina S Baucom; Thomas P Brutnell; Nicholas C Carpita; Cristian Chaparro; Jer-Ming Chia; Jean-Marc Deragon; James C Estill; Yan Fu; Jeffrey A Jeddeloh; Yujun Han; Hyeran Lee; Pinghua Li; Damon R Lisch; Sanzhen Liu; Zhijie Liu; Dawn Holligan Nagel; McCann Maureen; Phillip SanMiguel; Alan Myers; Dan Nettleton; John Nguyen; Bryan W Penning; Lalit Ponnala; Kevin L Schneider; David C Schwartz; Anupma Sharma; Carol Soderlund; Nathan M Springer; Qi Sun; Hao Wang; Michael Waterman; Richard Westerman; Thomas K Wolfgruber; Lixing Yang; Yeisoo Yu; Lifang Zhang; Shiguo Zhou; Qihui Zhu; Jeffrey L Bennetzen; R Kelly Dawe; Jiming Jiang; Ning Jiang; Gernot G Presting; Susan R Wessler; Srinivas Aluru; Robert A Martienssen; Sandra W Clifton; W Richard McCombie; Rod A Wing; Richard K Wilson
The B73 maize genome: complexity, diversity, and dynamics.
Science (New York, N.Y.) 2009;326(5956):1112-5.
2009: Regina S Baucom; James C Estill; Cristian Chaparro; Naadira Upshaw; Ansuya Jogi; Jean-Marc Deragon; Richard P Westerman; Phillip SanMiguel; Jeffrey L Bennetzen
Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome.
PLoS genetics 2009;5(11):e1000732.
2009: Fusheng Wei; Joshua C Stein; Chengzhi Liang; Jianwei Zhang; Robert S Fulton; Regina S Baucom; Emanuele De Paoli; Shiguo Zhou; Lixing Yang; Yujun Han; Shiran Pasternak; Apurva Narechania; Lifang Zhang; Cheng-Ting Yeh; Kai Ying; Dawn H Nagel; Kristi Collura; David Kudrna; Jennifer Currie; Jinke Lin; Hyeran Kim; Angelina Angelova; Gabriel Scara; Marina Wissotski; Wolfgang Golser; Laura Courtney; Scott Kruchowski; Tina A Graves; Susan M Rock; Stephanie Adams; Lucinda A Fulton; Catrina Fronick; William Courtney; Melissa Kramer; Lori Spiegel; Lydia Nascimento; Ananth Kalyanaraman; Cristian Chaparro; Jean-Marc Deragon; Phillip San Miguel; Ning Jiang; Susan R Wessler; Pamela J Green; Yeisoo Yu; David C Schwartz; Blake C Meyers; Jeffrey L Bennetzen; Robert A Martienssen; W Richard McCombie; Srinivas Aluru; Sandra W Clifton; Patrick S Schnable; Doreen Ware; Richard K Wilson; Rod A Wing
Detailed analysis of a contiguous 22-Mb region of the maize genome.
PLoS genetics 2009;5(11):e1000728.
2009: Lixing Yang; Jeffrey L Bennetzen
Structure-based discovery and description of plant and animal Helitrons.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(31):12832-7.
2009: Fei Lu; Jetty S S Ammiraju; Abhijit Sanyal; Shengli Zhang; Rentao Song; Jinfeng Chen; Guisheng Li; Yi Sui; Xiang Song; Zhukuan Cheng; Antonio Costa de Oliveira; Jeffrey L Bennetzen; Scott A Jackson; Rod A Wing; Mingsheng Chen
Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(6):2071-6.
2009: Jeffrey L Bennetzen
Biology and the beasts: individual investigator-driven research in the megaprojects era.
Trends in genetics : TIG 2009;25(2):57-9.
2009: Regina S Baucom; James C Estill; Jim Leebens-Mack; Jeffrey L Bennetzen
Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome.
Genome research 2009;19(2):243-54.
2009: James C Estill; Jeffrey L Bennetzen
The DAWGPAWS pipeline for the annotation of genes and transposable elements in plant genomes.
Plant methods 2009;5():8.
2009: Andrew N Doust; Elizabeth A Kellogg; Katrien M Devos; Jeffrey L Bennetzen
Foxtail millet: a sequence-driven grass model system.
Plant physiology 2009;149(1):137-41.
2008: Jetty S S Ammiraju; Fei Lu; Abhijit Sanyal; Yeisoo Yu; Xiang Song; Ning Jiang; Ana Clara Pontaroli; Teri Rambo; Jennifer Currie; Kristi Collura; Jayson Talag; Chuanzhu Fan; José L Goicoechea; Andrea Zuccolo; Jinfeng Chen; Jeffrey L Bennetzen; Mingsheng Chen; Scott Jackson; Rod A Wing
Dynamic evolution of oryza genomes is revealed by comparative genomic analysis of a genus-wide vertical data set.
The Plant cell 2008;20(12):3191-209.
2008: Ervin D Nagy; Jeffrey L Bennetzen
Pathogen corruption and site-directed recombination at a plant disease resistance gene cluster.
Genome research 2008;18(12):1918-23.
2008: Renyi Liu; Jeffrey L Bennetzen
Enchilada redux: how complete is your genome sequence?
The New phytologist 2008;179(2):249-50.
2008: Joann A Conner; Shailendra Goel; Gunawati Gunawan; Marie-Michele Cordonnier-Pratt; Virgil Ed Johnson; Chun Liang; Haiming Wang; Lee H Pratt; John E Mullet; Jeremy DeBarry; Lixing Yang; Jeffrey L Bennetzen; Patricia E Klein; Peggy Ozias-Akins
Sequence analysis of bacterial artificial chromosome clones from the apospory-specific genomic region of Pennisetum and Cenchrus.
Plant physiology 2008;147(3):1396-411.
2008: Stefan A Rensing; Daniel Lang; Andreas D Zimmer; Astrid Terry; Asaf Salamov; Harris Shapiro; Tomoaki Nishiyama; Pierre-François Perroud; Erika A Lindquist; Yasuko Kamisugi; Takako Tanahashi; Keiko Sakakibara; Tomomichi Fujita; Kazuko Oishi; Tadasu Shin-I; Yoko Kuroki; Atsushi Toyoda; Yutaka Suzuki; Shin-Ichi Hashimoto; Kazuo Yamaguchi; Sumio Sugano; Yuji Kohara; Asao Fujiyama; Aldwin Anterola; Setsuyuki Aoki; Neil Ashton; W Brad Barbazuk; Elizabeth Barker; Jeffrey L Bennetzen; Robert Blankenship; Sung Hyun Cho; Susan Dutcher; Mark Estelle; Jeffrey A Fawcett; Heidrun Gundlach; Kousuke Hanada; Alexander Heyl; Karen A Hicks; Jon Hughes; Martin Lohr; Klaus Mayer; Alexander Melkozernov; Takashi Murata; David Nelson; Birgit Pils; Michael Prigge; Bernd Reiss; Tanya Renner; Stephane Marcel Rombauts; Paul J Rushton; Anton Sanderfoot; Gabriele Schween; Shin-Han Shiu; Kurt Stueber; Frederica L Theodoulou; Hank Tu; Yves Van de Peer; Paul J Verrier; Elizabeth Waters; Andrew Wood; Lixing Yang; David Cove; Andrew C Cuming; Mitsuyasu Hasebe; Susan Lucas; Brent D Mishler; Ralf Reski; Igor V Grigoriev; Ralph S Quatrano; Jeffrey L Boore
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.
Science (New York, N.Y.) 2008;319(5859):64-9.
2008: William Nelson; Meizhong Luo; Jianxin Ma; Matt Estep; James Estill; Ruifeng He; Jayson Talag; Nicholas B Sisneros; Dave Kudrna; Hyeran Kim; Jetty S S Ammiraju; Kristi Collura; Arvind K Bharti; Joachim Messing; Rod A Wing; Phillip SanMiguel; Jeffrey L Bennetzen; Carol Soderlund
Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains.
BMC genomics 2008;9():621.
2008: Joachim Messing; Jeffrey L Bennetzen
Grass genome structure and evolution.
Genome dynamics 2008;4():41-56.
2008: Jeremy D DeBarry; Renyi Liu; Jeffrey L Bennetzen
Discovery and assembly of repeat family pseudomolecules from sparse genomic sequence data using the Assisted Automated Assembler of Repeat Families (AAARF) algorithm.
BMC bioinformatics 2008;9():235.
2007: Thomas Wicker; François Sabot; Aurélie Hua-Van; Jeffrey L Bennetzen; Pierre Capy; Boulos Chalhoub; Andrew Flavell; Philippe Leroy; Michele Morgante; Olivier Panaud; Etienne Paux; Phillip SanMiguel; Alan Schulman
A unified classification system for eukaryotic transposable elements.
Nature reviews. Genetics 2007;8(12):973-82.
2007: Jianxin Ma; Rod A Wing; Jeffrey L Bennetzen; Scott A Jackson
Evolutionary history and positional shift of a rice centromere.
Genetics 2007;177(2):1217-20.
2007: Renyi Liu; Clémentine Vitte; Jianxin Ma; A Assibi Mahama; Thanda Dhliwayo; Michael Lee; Jeffrey L Bennetzen
A GeneTrek analysis of the maize genome.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(28):11844-9.
2007: Vanessa Corby-Harris; Ana Clara Pontaroli; Lawrence J Shimkets; Jeffrey L Bennetzen; Kristin E Habel; Daniel E L Promislow
Geographical distribution and diversity of bacteria associated with natural populations of Drosophila melanogaster.
Applied and environmental microbiology 2007;73(11):3470-9.
2007: Ervin D Nagy; Tso-Ching Lee; Wusirika Ramakrishna; Zijun Xu; Patricia E Klein; Phillip SanMiguel; Chiu-Ping Cheng; Jingling Li; Katrien M Devos; Keith F Schertz; Larry Dunkle; Jeffrey L Bennetzen
Fine mapping of the Pc locus of Sorghum bicolor, a gene controlling the reaction to a fungal pathogen and its host-selective toxin.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2007;114(6):961-70.
2007: Jeffrey L Bennetzen
Patterns in grass genome evolution.
Current opinion in plant biology 2007;10(2):176-81.
2007: Jianxin Ma; Rod A Wing; Jeffrey L Bennetzen; Scott A Jackson
Plant centromere organization: a dynamic structure with conserved functions.
Trends in genetics : TIG 2007;23(3):134-9.
2007: markandeya gorantla; P Ravindra Babu; V B Reddy Lachagari; A M M Reddy; Ramakrishna Wusirika; Jeffrey L Bennetzen; Arjula R Reddy
Identification of stress-responsive genes in an indica rice (Oryza sativa L.) using ESTs generated from drought-stressed seedlings.
Journal of experimental botany 2007;58(2):253-65.
2007: Mathews M Dida; Sujatha Ramakrishnan; Jeffrey L Bennetzen; Mike D Gale; Katrien M Devos
The genetic map of finger millet, Eleusine coracana.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2007;114(2):321-32.
2006: Clémentine Vitte; Jeffrey L Bennetzen
Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(47):17638-43.
2006: Rémy Bruggmann; Arvind K Bharti; Heidrun Gundlach; Jinsheng Lai; Sarah Young; Ana C Pontaroli; Fusheng Wei; Georg Haberer; Galina Fuks; Chunguang Du; Christina Raymond; Matt C Estep; Renyi Liu; Jeffrey L Bennetzen; Agnes P Chan; Pablo D Rabinowicz; John Quackenbush; W Brad Barbazuk; Rod A Wing; Bruce Birren; Chad Nusbaum; Steve Rounsley; Klaus F X Mayer; Joachim Messing
Uneven chromosome contraction and expansion in the maize genome.
Genome research 2006;16(10):1241-51.
2006: Zhaohui Chu; Meng Yuan; Jialing Yao; Xiaojia Ge; Bin Yuan; Caiguo Xu; Xianghua Li; Binying Fu; Zhikang Li; Jeffrey L Bennetzen; Qifa Zhang; Shiping Wang
Promoter mutations of an essential gene for pollen development result in disease resistance in rice.
Genes & development 2006;20(10):1250-5.
2006: Pablo D Rabinowicz; Jeffrey L Bennetzen
The maize genome as a model for efficient sequence analysis of large plant genomes.
Current opinion in plant biology 2006;9(2):149-56.
2006: Zhaohui Chu; Binying Fu; Hong Yang; Caiguo Xu; Zhikang Li; A Sanchez; Y J Park; Jeffrey L Bennetzen; Qifa Zhang; Shiping Wang
Targeting xa13, a recessive gene for bacterial blight resistance in rice.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2006;112(3):455-61.
2006: Jianxin Ma; Jeffrey L Bennetzen
Recombination, rearrangement, reshuffling, and divergence in a centromeric region of rice.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(2):383-8.
2006: Agnes P Chan; Geo Pertea; Foo Cheung; Dan Lee; Li Zheng; Catherine A Whitelaw; Ana C Pontaroli; Phillip SanMiguel; Yinan Yuan; Jeffrey L Bennetzen; W Brad Barbazuk; John Quackenbush; Pablo D Rabinowicz
The TIGR Maize Database.
Nucleic acids research 2006;34(Database issue):D771-6.
2005: Katrien M Devos; Jianxin Ma; Ana C Pontaroli; Lee H Pratt; Jeffrey L Bennetzen
Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(52):19243-8.
2005: Jeffrey L Bennetzen
Transposable elements, gene creation and genome rearrangement in flowering plants.
Current opinion in genetics & development 2005;15(6):621-7.
2005: John Emberton; Jianxin Ma; Yinan Yuan; Phillip SanMiguel; Jeffrey L Bennetzen
Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries.
Genome research 2005;15(10):1441-6.
2005: Jianxin Ma; Phillip SanMiguel; Jinsheng Lai; Joachim Messing; Jeffrey L Bennetzen
DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes.
Genetics 2005;170(3):1209-20.
2005: Zuzana Swigonová; Jeffrey L Bennetzen; Joachim Messing
Structure and evolution of the r/b chromosomal regions in rice, maize and sorghum.
Genetics 2005;169(2):891-906.
2005: Jeffrey L Bennetzen; Jianxin Ma; Katrien M Devos
Mechanisms of recent genome size variation in flowering plants.
Annals of botany 2005;95(1):127-32.
2004: Jeffrey L Bennetzen; Craig Coleman; Renyi Liu; Jianxin Ma; Wusirika Ramakrishna
Consistent over-estimation of gene number in complex plant genomes.
Current opinion in plant biology 2004;7(6):732-6.
2004: Elizabeth A Kellogg; Jeffrey L Bennetzen
The evolution of nuclear genome structure in seed plants.
American journal of botany 2004;91(10):1709-25.
2004: Bikram S Gill; Rudi Appels; Anna-Maria Botha-Oberholster; C Robin Buell; Jeffrey L Bennetzen; Boulos Chalhoub; Forrest Chumley; Jan Dvorák; Masaru Iwanaga; Beat Keller; Wanlong Li; W Richard McCombie; Yasunari Ogihara; Francis Quetier; Takuji Sasaki
A workshop report on wheat genome sequencing: International Genome Research on Wheat Consortium.
Genetics 2004;168(2):1087-96.
2004: Jinsheng Lai; Jianxin Ma; Zuzana Swigonová; Wusirika Ramakrishna; Eric Linton; Victor Llaca; Bahattin Tanyolac; Yong-Jin Park; O-Young Jeong; Jeffrey L Bennetzen; Joachim Messing
Gene loss and movement in the maize genome.
Genome research 2004;14(10A):1924-31.
2004: Zuzana Swigonová; Jinsheng Lai; Jianxin Ma; Wusirika Ramakrishna; Victor Llaca; Jeffrey L Bennetzen; Joachim Messing
Close split of sorghum and maize genome progenitors.
Genome research 2004;14(10A):1916-23.
2004: Jianxin Ma; Jeffrey L Bennetzen
Rapid recent growth and divergence of rice nuclear genomes.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(34):12404-10.
2004: Yong-Jin Park; Anupam Dixit; Jae-Woong Yoo; Jeffrey L Bennetzen
Further evidence of microcolinearity between barley and rice genomes at two orthologous regions.
Molecules and cells 2004;17(3):492-502.
2004: Jianxin Ma; Katrien M Devos; Jeffrey L Bennetzen
Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice.
Genome research 2004;14(5):860-9.
2004: Balasubramanaim Muthukumar; Jeffrey L Bennetzen
Isolation and characterization of genomic and transcribed retrotransposon sequences from sorghum.
Molecular genetics and genomics : MGG 2004;271(3):308-16.
2004: Liuling Yan; Artem Loukoianov; Ann Blechl; Gabriela Tranquilli; Wusirika Ramakrishna; Phillip SanMiguel; Jeffrey L Bennetzen; Viviana Echenique; Jorge Dubcovsky
The wheat VRN2 gene is a flowering repressor down-regulated by vernalization.
Science (New York, N.Y.) 2004;303(5664):1640-4.
2004: Zuzana Swigonova; Jinsheng Lai; Jianxin Ma; Wusirika Ramakrishna; Victor Llaca; Jeffrey L Bennetzen; Joachim Messing
On the tetraploid origin of the maize genome.
Comparative and functional genomics 2004;5(3):281-4.
2003: Catherine A Whitelaw; W Brad Barbazuk; Geo Pertea; Agnes P Chan; Foo Cheung; Yuandan Lee; Li Zheng; S van Heeringen; Svetlana Karamycheva; Jeffrey L Bennetzen; Phillip SanMiguel; Nathan Lakey; Joseph A Bedell; Y Yuan; Muhammad A Budiman; A Resnick; S Van Aken; Teresa Utterback; S Riedmuller; M Williams; Tamara Feldblyum; K Schubert; R Beachy; Claire M Fraser-Liggett; John Quackenbush
Enrichment of gene-coding sequences in maize by genome filtration.
Science (New York, N.Y.) 2003;302(5653):2118-20.
2003: Katica Ilic; Phillip SanMiguel; Jeffrey L Bennetzen
A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(21):12265-70.
2003: Soledad Sanz-Alferez; Phillip SanMiguel; Young-Kwan Jin; Patricia S Springer; Jeffrey L Bennetzen
Structure and evolution of the Cinful retrotransposon family of maize.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 2003;46(5):745-52.
2003: Yinan Yuan; Phillip SanMiguel; Jeffrey L Bennetzen
High-Cot sequence analysis of the maize genome.
The Plant journal : for cell and molecular biology 2003;34(2):249-55.
2003: Jeffrey L Bennetzen; Jianxin Ma
The genetic colinearity of rice and other cereals on the basis of genomic sequence analysis.
Current opinion in plant biology 2003;6(2):128-33.
2003: Wusirika Ramakrishna; Jeffrey L Bennetzen
Genomic colinearity as a tool for plant gene isolation.
Methods in molecular biology (Clifton, N.J.) 2003;236():109-22.
2002: Wusirika Ramakrishna; John Emberton; Phillip SanMiguel; Matthew Ogden; Victor Llaca; Joachim Messing; Jeffrey L Bennetzen
Comparative sequence analysis of the sorghum Rph region and the maize Rp1 resistance gene complex.
Plant physiology 2002;130(4):1728-38.
2002: Liuling Yan; Viviana Echenique; Carlos S Busso; Phillip SanMiguel; Wusirika Ramakrishna; Jeffrey L Bennetzen; S Harrington; Jorge Dubcovsky
Cereal genes similar to Snf2 define a new subfamily that includes human and mouse genes.
Molecular genetics and genomics : MGG 2002;268(4):488-99.
2002: Wusirika Ramakrishna; John Emberton; Matthew Ogden; Phillip SanMiguel; Jeffrey L Bennetzen
Structural analysis of the maize rp1 complex reveals numerous sites and unexpected mechanisms of local rearrangement.
The Plant cell 2002;14(12):3213-23.
2002: Roger Beachy; Jeffrey L Bennetzen; Bruce Chassy; Maarten Chrispeels; joanne chory; Joseph R Ecker; Joseph P Noel; Steve A Kay; Caroline Dean; Chris Lamb; Jonathan Jones; Charles R Santerre; Julian I Schroeder; Jim Umen; Martin Yanofsky; Susan Wessler; Yunde Zhao; Wayne Parrott
Divergent perspectives on GM food.
Nature biotechnology 2002;20(12):1195-6; author reply 1197.
2002: Wusirika Ramakrishna; Jorge Dubcovsky; Yong-Jin Park; Carlos S Busso; John Emberton; Phillip SanMiguel; Jeffrey L Bennetzen
Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes.
Genetics 2002;162(3):1389-400.
2002: Maike Stam; Christiane Belele; Wusirika Ramakrishna; Jane E Dorweiler; Jeffrey L Bennetzen; Vicki L Chandler
The regulatory regions required for B' paramutation and expression are located far upstream of the maize b1 transcribed sequences.
Genetics 2002;162(2):917-30.
2002: Yinan Yuan; Phillip SanMiguel; Jeffrey L Bennetzen
Methylation-spanning linker libraries link gene-rich regions and identify epigenetic boundaries in Zea mays.
Genome research 2002;12(9):1345-9.
2002: Jeffrey L Bennetzen; Wusirika Ramakrishna
Exceptional haplotype variation in maize.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(14):9093-5.
2002: Katrien M Devos; James K M Brown; Jeffrey L Bennetzen
Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis.
Genome research 2002;12(7):1075-9.
2002: Jeffrey L Bennetzen
Mechanisms and rates of genome expansion and contraction in flowering plants.
Genetica 2002;115(1):29-36.
2002: Phillip SanMiguel; Wusirika Ramakrishna; Jeffrey L Bennetzen; Carlos S Busso; Jorge Dubcovsky
Transposable elements, genes and recombination in a 215-kb contig from wheat chromosome 5A(m).
Functional & integrative genomics 2002;2(1-2):70-80.
2002: Nils Rostoks; Yong-Jin Park; Wusirika Ramakrishna; Jianxin Ma; Arnis Druka; bryan shiloff; Phillip SanMiguel; Zeyu Jiang; Robert Brueggeman; Devinder Sandhu; Kulvinder Gill; Jeffrey L Bennetzen; Andris Kleinhofs
Genomic sequencing reveals gene content, genomic organization, and recombination relationships in barley.
Functional & integrative genomics 2002;2(1-2):51-9.
2002: Jeffrey L Bennetzen
The rice genome. Opening the door to comparative plant biology.
Science (New York, N.Y.) 2002;296(5565):60-3.
2002: Jeffrey L Bennetzen; Wusirika Ramakrishna
Numerous small rearrangements of gene content, order and orientation differentiate grass genomes.
Plant molecular biology 2002;48(5-6):821-7.
2002: Arjula R Reddy; Wusirika Ramakrishna; A Chandra Sekhar; Nagabhushana Ithal; P Ravindra Babu; M F Bonaldo; M B Soares; Jeffrey L Bennetzen
Novel genes are enriched in normalized cDNA libraries from drought-stressed seedlings of rice (Oryza sativa L. subsp. indica cv. Nagina 22).
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 2002;45(1):204-11.
2002: Wusirika Ramakrishna; Jianxin Ma; Phillip SanMiguel; John Emberton; Jorge Dubcovsky; bryan shiloff; Zeyu Jiang; Nils Rostoks; Carlos S Busso; Matthew Ogden; Eric Linton; Andris Kleinhofs; Katrien M Devos; Joachim Messing; Jeffrey L Bennetzen
Frequent genic rearrangements in two regions of grass genomes identified by comparative sequence analysis.
Comparative and functional genomics 2002;3(2):165-6.
2001: Jeffrey L Bennetzen; Vicki L Chandler; P Schnable
National Science Foundation-sponsored workshop report. Maize genome sequencing project.
Plant physiology 2001;127(4):1572-8.
2001: Jorge Dubcovsky; Wusirika Ramakrishna; Phillip SanMiguel; Carlos S Busso; Liuling Yan; bryan shiloff; Jeffrey L Bennetzen
Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes.
Plant physiology 2001;125(3):1342-53.
2001: J C Xu; Y M Weerasuriya; Jeffrey L Bennetzen
[Construction of genetic map in sorghum and fine mapping of the germination stimulant production gene response to Striga asiatica].
Yi chuan xue bao = Acta genetica Sinica 2001;28(9):870-6.
2001: Alexander Tikhonov; Laurence Lavie; Christophe Tatout; Jeffrey L Bennetzen; Zoya Avramova; Jean-Marc Deragon
Target sites for SINE integration in Brassica genomes display nuclear matrix binding activity.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2001;9(4):325-37.
2001: Jeffrey L Bennetzen
Arabidopsis arrives.
Nature genetics 2001;27(1):3-5.
2000: Amar Kumar; Jeffrey L Bennetzen
Retrotransposons: central players in the structure, evolution and function of plant genomes.
Trends in plant science 2000;5(12):509-10.
2000: Jeffrey L Bennetzen
Comparative sequence analysis of plant nuclear genomes:m microcolinearity and its many exceptions.
The Plant cell 2000;12(7):1021-9.
2000: Alexander Tikhonov; Jeffrey L Bennetzen; Zoya Avramova
Structural domains and matrix attachment regions along colinear chromosomal segments of maize and sorghum.
The Plant cell 2000;12(2):249-64.
2000: Jeffrey L Bennetzen
The many hues of plant heterochromatin.
Genome biology 2000;1(1):REVIEWS107.
2000: Jeffrey L Bennetzen
Transposable element contributions to plant gene and genome evolution.
Plant molecular biology 2000;42(1):251-69.
1999: Alexander Tikhonov; Phillip SanMiguel; Y Nakajima; N M Gorenstein; Jeffrey L Bennetzen; Zoya Avramova
Colinearity and its exceptions in orthologous adh regions of maize and sorghum.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(13):7409-14.
1999: Jeffrey L Bennetzen
Plant genomics takes root, branches out.
Trends in genetics : TIG 1999;15(3):85-7.
1999: Amar Kumar; Jeffrey L Bennetzen
Plant retrotransposons.
Annual review of genetics 1999;33():479-532.
1998: Phillip SanMiguel; B S Gaut; Alexander Tikhonov; Y Nakajima; Jeffrey L Bennetzen
The paleontology of intergene retrotransposons of maize.
Nature genetics 1998;20(1):43-5.
1998: Michael Bevan; Jeffrey L Bennetzen; Robert A Martienssen
Genome studies and molecular evolution. Commonalities, contrasts, continuity and change in plant genomes.
Current opinion in plant biology 1998;1(2):101-2.
1998: Jeffrey L Bennetzen
The structure and evolution of angiosperm nuclear genomes.
Current opinion in plant biology 1998;1(2):103-8.
1998: Jeffrey L Bennetzen; Phillip SanMiguel; M Chen; Alexander Tikhonov; Michael G Francki; Zoya Avramova
Grass genomes.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(5):1975-8.
1998: Zoya Avramova; Alexander Tikhonov; M Chen; Jeffrey L Bennetzen
Matrix attachment regions and structural colinearity in the genomes of two grass species.
Nucleic acids research 1998;26(3):761-7.
1998: Jeffrey L Bennetzen
The evolution of grass genome organisation and function.
Symposia of the Society for Experimental Biology 1998;51():123-6.
1998: M Chen; Phillip SanMiguel; Jeffrey L Bennetzen
Sequence organization and conservation in sh2/a1-homologous regions of sorghum and rice.
Genetics 1998;148(1):435-43.
1997: Jeffrey L Bennetzen; M Freeling
The unified grass genome: synergy in synteny.
Genome research 1997;7(4):301-6.
1997: R D Frederick; J Chiu; Jeffrey L Bennetzen; A K Handa
Identification of a pathogenicity locus, rpfA, in Erwinia carotovora subsp. carotovora subsp. carotovora that encodes a two-component sensor-regulator protein.
Molecular plant-microbe interactions : MPMI 1997;10(3):407-15.
1997: M Chen; Phillip SanMiguel; A C de Oliveira; S S Woo; Huamin Zhang; Rod A Wing; Jeffrey L Bennetzen
Microcolinearity in sh2-homologous regions of the maize, rice, and sorghum genomes.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(7):3431-5.
1996: Zoya Avramova; Alexander Tikhonov; Phillip SanMiguel; Y K Jin; C Liu; S S Woo; Rod A Wing; Jeffrey L Bennetzen
Gene identification in a complex chromosomal continuum by local genomic cross-referencing.
The Plant journal : for cell and molecular biology 1996;10(6):1163-8.
1996: M Chen; Jeffrey L Bennetzen
Sequence composition and organization in the Sh2/A1-homologous region of rice.
Plant molecular biology 1996;32(6):999-1001.
1996: Phillip SanMiguel; Alexander Tikhonov; Y K Jin; N Motchoulskaia; D Zakharov; A Melake-Berhan; P S Springer; K J Edwards; M Lee; Zoya Avramova; Jeffrey L Bennetzen
Nested retrotransposons in the intergenic regions of the maize genome.
Science (New York, N.Y.) 1996;274(5288):765-8.
1996: Jeffrey L Bennetzen
The contributions of retroelements to plant genome organization, function and evolution.
Trends in microbiology 1996;4(9):347-53.
1996: K J Edwards; J Veuskens; H Rawles; A Daly; Jeffrey L Bennetzen
Characterization of four dispersed repetitive DNA sequences from Zea mays and their use in constructing contiguous DNA fragments using YAC clones.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 1996;39(4):811-7.
1996: A C de Oliveira; T Richter; Jeffrey L Bennetzen
Regional and racial specificities in sorghum germplasm assessed with DNA markers.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 1996;39(3):579-87.
1996: B Buckner; P S Miguel; D Janick-Buckner; Jeffrey L Bennetzen
The y1 gene of maize codes for phytoene synthase.
Genetics 1996;143(1):479-88.
1996: Jeffrey L Bennetzen; Phillip SanMiguel; C N Liu; M Chen; Alexander Tikhonov; Antonio Costa de Oliveira; Y K Jin; Zoya Avramova; S S Woo; H Zhang; Rod A Wing
The Hybaid Lecture. Microcollinearity and segmental duplication in the evolution of grass nuclear genomes.
Symposia of the Society for Experimental Biology 1996;50():1-3.
1996: Jeffrey L Bennetzen
The Mutator transposable element system of maize.
Current topics in microbiology and immunology 1996;204():195-229.
1995: Zoya Avramova; Phillip SanMiguel; E Georgieva; Jeffrey L Bennetzen
Matrix attachment regions and transcribed sequences within a long chromosomal continuum containing maize Adh1.
The Plant cell 1995;7(10):1667-80.
1995: T E Richter; T J Pryor; Jeffrey L Bennetzen; S H Hulbert
New rust resistance specificities associated with recombination in the Rp1 complex in maize.
Genetics 1995;141(1):373-81.
1995: S S Salimath; A C de Oliveira; Ian Godwin; Jeffrey L Bennetzen
Assessment of genome origins and genetic diversity in the genus Eleusine with DNA markers.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 1995;38(4):757-63.
1995: A D Cresse; S H Hulbert; W E Brown; J R Lucas; Jeffrey L Bennetzen
Mu1-related transposable elements of maize preferentially insert into low copy number DNA.
Genetics 1995;140(1):315-24.
1994: Jeffrey L Bennetzen; K Schrick; P S Springer; W E Brown; Phillip SanMiguel
Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 1994;37(4):565-76.
1994: Y K Jin; Jeffrey L Bennetzen
Integration and nonrandom mutation of a plasma membrane proton ATPase gene fragment within the Bs1 retroelement of maize.
The Plant cell 1994;6(8):1177-86.
1994: Colwyn M Thomas; D A Jones; J J English; B J Carroll; Jeffrey L Bennetzen; K Harrison; A Burbidge; G J Bishop; Jonathan D G Jones
Analysis of the chromosomal distribution of transposon-carrying T-DNAs in tomato using the inverse polymerase chain reaction.
Molecular & general genetics : MGG 1994;242(5):573-85.
1994: P S Springer; K J Edwards; Jeffrey L Bennetzen
DNA class organization on maize Adh1 yeast artificial chromosomes.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(3):863-7.
1993: Zoya Avramova; Jeffrey L Bennetzen
Isolation of matrices from maize leaf nuclei: identification of a matrix-binding site adjacent to the Adh1 gene.
Plant molecular biology 1993;22(6):1135-43.
1993: Jeffrey L Bennetzen; M Freeling
Grasses as a single genetic system: genome composition, collinearity and compatibility.
Trends in genetics : TIG 1993;9(8):259-61.
1993: K S Hong; T E Richter; Jeffrey L Bennetzen; S H Hulbert
Complex duplications in maize lines.
Molecular & general genetics : MGG 1993;239(1-2):115-21.
1993: M A Sudupak; Jeffrey L Bennetzen; S H Hulbert
Unequal exchange and meiotic instability of disease-resistance genes in the Rp1 region of maize.
Genetics 1993;133(1):119-25.
1992: Jeffrey L Bennetzen; S H Hulbert
Organization, instability and evolution of plant disease resistance genes.
Plant molecular biology 1992;20(4):575-8.
1991: L A Lyznik; J D McGee; P Y Tung; Jeffrey L Bennetzen; TK Hodges
Homologous recombination between plasmid DNA molecules in maize protoplasts.
Molecular & general genetics : MGG 1991;230(1-2):209-18.
1991: S H Hulbert; Jeffrey L Bennetzen
Recombination at the Rp1 locus of maize.
Molecular & general genetics : MGG 1991;226(3):377-82.
1990: S H Hulbert; T E Richter; J D Axtell; Jeffrey L Bennetzen
Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(11):4251-5.
1989: Y K Jin; Jeffrey L Bennetzen
Structure and coding properties of Bs1, a maize retrovirus-like transposon.
Proceedings of the National Academy of Sciences of the United States of America 1989;86(16):6235-9.
1989: W E Brown; D S Robertson; Jeffrey L Bennetzen
Molecular analysis of multiple mutator-derived alleles of the bronze locus of maize.
Genetics 1989;122(2):439-45.
1988: Jeffrey L Bennetzen; W E Blevins; A H Ellingboe
Cell-autonomous recognition of the rust pathogen determines rp1-specified resistance in maize.
Science (New York, N.Y.) 1988;241(4862):208-10.
1987: L Lee; C Fenoll; Jeffrey L Bennetzen
Construction and Homologous Expression of a Maize Adh1 Based NcoI Cassette Vector.
Plant physiology 1987;85(2):327-30.
1984: R F Barker; D V Thompson; D R Talbot; J Swanson; Jeffrey L Bennetzen
Nucleotide sequence of the maize transposable element Mul.
Nucleic acids research 1984;12(15):5955-67.
1984: Jeffrey L Bennetzen; J Swanson; W C Taylor; M Freeling
DNA insertion in the first intron of maize Adh1 affects message levels: cloning of progenitor and mutant Adh1 alleles.
Proceedings of the National Academy of Sciences of the United States of America 1984;81(13):4125-8.
1984: Elizabeth S Dennis; W L Gerlach; A J Pryor; Jeffrey L Bennetzen; A Inglis; Danny J Llewellyn; M M Sachs; R J Ferl; W James Peacock
Molecular analysis of the alcohol dehydrogenase (Adh1) gene of maize.
Nucleic acids research 1984;12(9):3983-4000.
1984: Jeffrey L Bennetzen
Transposable element Mu1 is found in multiple copies only in Robertson's Mutator maize lines.
Journal of molecular and applied genetics 1984;2(6):519-24.
1982: Jeffrey L Bennetzen; B D Hall
Codon selection in yeast.
The Journal of biological chemistry 1982;257(6):3026-31.
1982: Jeffrey L Bennetzen; B D Hall
The primary structure of the Saccharomyces cerevisiae gene for alcohol dehydrogenase.
The Journal of biological chemistry 1982;257(6):3018-25.
1981: Y Nagamine; Jeffrey L Bennetzen; A Sentenac; P Fromageot
Single-stranded DNA transcription by yeast RNA polymerase B.
Biochimica et biophysica acta 1981;656(2):220-7.
1981: B Lescure; Jeffrey L Bennetzen; A Sentenac
In vitro transcription of the yeast alcohol dehydrogenase I gene by homologous RNA polymerase B (II). Selective initiation and discontinuous elongation on a supercoiled template.
The Journal of biological chemistry 1981;256(21):11018-24.
1980: V M Williamson; Jeffrey L Bennetzen; E T Young; K Nasmyth; B D Hall
Isolation of the structural gene for alcohol dehydrogenase by genetic complementation in yeast.
Nature 1980;283(5743):214-6.