Username

Password

Forgot Password?

Preview

Sign-in free and Explore the Exciting World of BiomedExperts:

Over 1.500.000 Profiles
More than 1.800 Organizations worldwide
State of the Art Network Visualizations

Manage your own Profile
Locate Experts in your Country/Region
Locate Experts in your 1. and 2. Level Network
Connect to Experts Worldwide

NetworkView

Tairo Oshima

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Chemicals & Drugs

Living Beings

Concepts & Ideas

Genes & Molecular Sequences

Phenomena

Hot Temperature

Procedures

Molecular Cloning

Physiology

Site-Directed Mutagenesis

Sign-in to see full Profile

Network (preview)

Co-Publications
Name
51
Yamagishi, Akihiko
23
Tanaka, Nobuo
17
Moriyama, H
12
Yokobori, Shin-ichi
10
Suzuki, Toshiharu
8
Tamakoshi, Masatada
8
Akanuma, Satoshi
7
Iwasaki, Toshio
6
Denda, Kimitoshi
5
Kawashima, Etsuko
5
Terui, Yusuke
5
Yamagishi, Akihiko
5
Nemoto, Naoki
4
Shida, Yasuo
4
Shimada, Haruo

Sign-in to see all Coauthors

Publications

TOP 3
Imai Misaki; Chikatsu Daisuke; Inomata Emire; Oshima Tairo; Kawai Gota
Docking simulation of polyamines on a kissing-loop RNA dimer.
Yokobori Shin-ichi; Itoh Takashi; Yoshinari Shigeo; Nomura Norimichi; Sako Yoshihiko; Yamagishi Akihiko; Oshima Tairo; Kita Kiyoshi; Watanabe Yoh-ichi
Gain and loss of an intron in a protein-coding gene in Archaea: the case of an archaeal RNA pseudouridine synthase gene.
Kounosu Asako; Iwasaki Toshio; Baba Seiki; Hayashi-Iwasaki Yoko; Oshima Tairo; Kumasaka Takashi
Crystallization and preliminary X-ray diffraction studies of the prototypal homologue of mitoNEET (Tth-NEET0026) from the extreme thermophile Thermus thermophilus HB8.

Sign-in to see all Publications

Sign in free and see...

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the visualized research activity
of experts around the globe

Sign-in to see more

Geonetwork of Tairo Oshima (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

Sign-in to see more

All Publications

2009: Imai Misaki; Chikatsu Daisuke; Inomata Emire; Oshima Tairo; Kawai Gota
Docking simulation of polyamines on a kissing-loop RNA dimer.
Nucleic acids symposium series (2004) 2009;(53):273-4.
2009: Yokobori Shin-ichi; Itoh Takashi; Yoshinari Shigeo; Nomura Norimichi; Sako Yoshihiko; Yamagishi Akihiko; Oshima Tairo; Kita Kiyoshi; Watanabe Yoh-ichi
Gain and loss of an intron in a protein-coding gene in Archaea: the case of an archaeal RNA pseudouridine synthase gene.
BMC evolutionary biology 2009;9():198.
2008: Kounosu Asako; Iwasaki Toshio; Baba Seiki; Hayashi-Iwasaki Yoko; Oshima Tairo; Kumasaka Takashi
Crystallization and preliminary X-ray diffraction studies of the prototypal homologue of mitoNEET (Tth-NEET0026) from the extreme thermophile Thermus thermophilus HB8.
Acta crystallographica. Section F, Structural biology and crystallization communications 2008;64(Pt 12):1146-8.
2008: Shimizu Mikio; Yamagishi Akihiko; Kinoshita Kenji; Shida Yasuo; Oshima Tairo
Prebiotic origin of glycolytic metabolism: histidine and cysteine can produce acetyl CoA from glucose via reactions homologous to non-phosphorylated Entner-Doudoroff pathway.
Journal of biochemistry 2008;144(3):383-8.
2008: Shimada Haruo; Nemoto Naoki; Shida Yasuo; Oshima Tairo; Yamagishi Akihiko
Effects of pH and temperature on the composition of polar lipids in Thermoplasma acidophilum HO-62.
Journal of bacteriology 2008;190(15):5404-11.
2008: Yokobori Shin-ichi; Iseto Tohru; Asakawa Shuichi; Sasaki Takashi; Shimizu Nobuyoshi; Yamagishi Akihiko; Oshima Tairo; Hirose Euichi
Complete nucleotide sequences of mitochondrial genomes of two solitary entoprocts, Loxocorone allax and Loxosomella aloxiata: implications for lophotrochozoan phylogeny.
Molecular phylogenetics and evolution 2008;47(2):612-28.
2008: Oshima Tairo; Moriya Toshiyuki
A preliminary analysis of microbial and biochemical properties of high-temperature compost.
Annals of the New York Academy of Sciences 2008;1125():338-44.
2007: Yokobori Shin-ichi; Lindsay Dhugal J; Yoshida Mari; Tsuchiya Kotaro; Yamagishi Akihiko; Maruyama Tadashi; Oshima Tairo
Mitochondrial genome structure and evolution in the living fossil vampire squid, Vampyroteuthis infernalis, and extant cephalopods.
Molecular phylogenetics and evolution 2007;44(2):898-910.
2006: Takeda Hiroshi; Toyooka Takashi; Ikeuchi Yoshiho; Yokobori Shin-ichi; Okadome Kan; Takano Fuyumi; Oshima Tairo; Suzuki Tsutomu; Endo Yaeta; Hori Hiroyuki
The substrate specificity of tRNA (m1G37) methyltransferase (TrmD) from Aquifex aeolicus.
Genes to cells : devoted to molecular & cellular mechanisms 2006;11(12):1353-65.
2006: Yoshinari Shigeo; Itoh Takashi; Hallam Steven J; DeLong Edward F; Yokobori Shin-ichi; Yamagishi Akihiko; Oshima Tairo; Kita Kiyoshi; Watanabe Yoh-ichi
Archaeal pre-mRNA splicing: a connection to hetero-oligomeric splicing endonuclease.
Biochemical and biophysical research communications 2006;346(3):1024-32.
2006: Yamashiro Kan; Yokobori Shin-Ichi; Oshima Tairo; Yamagishi Akihiko
Structural analysis of the plasmid pTA1 isolated from the thermoacidophilic archaeon Thermoplasma acidophilum.
Extremophiles : life under extreme conditions 2006;10(4):327-35.
2005: Ohnuma Mio; Terui Yusuke; Tamakoshi Masatada; Mitome Hidemichi; Niitsu Masaru; Samejima Keijiro; Kawashima Etsuko; Oshima Tairo
N1-aminopropylagmatine, a new polyamine produced as a key intermediate in polyamine biosynthesis of an extreme thermophile, Thermus thermophilus.
The Journal of biological chemistry 2005;280(34):30073-82.
2005: Oshima Tairo; Nakamura Haruki
[Overview: Progress on and trends in the world Protein 3000 Project]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2005;50(7):831-5.
2005: Terui Yusuke; Ohnuma Mio; Hiraga Kaori; Kawashima Etsuko; Oshima Tairo
Stabilization of nucleic acids by unusual polyamines produced by an extreme thermophile, Thermus thermophilus.
The Biochemical journal 2005;388(Pt 2):427-33.
2005: Yamashita Masamichi; Ishikawa Yoji; Oshima Tairo;
[Engineering issues of microbial ecology in space agriculture]
Uchu Seibutsu Kagaku 2005;19(1):25-36.
2005: Yokobori Shin-ichi; Oshima Tairo; Wada Hiroshi
Complete nucleotide sequence of the mitochondrial genome of Doliolum nationalis with implications for evolution of urochordates.
Molecular phylogenetics and evolution 2005;34(2):273-83.
2004: Yokobori Shin-ichi; Fukuda Naoya; Nakamura Mitsue; Aoyama Tomoko; Oshima Tairo
Long-term conservation of six duplicated structural genes in cephalopod mitochondrial genomes.
Molecular biology and evolution 2004;21(11):2034-46.
2004: Hiraga Kaori; Yamagishi Akihiko; Oshima Tairo
Mapping of unit boundaries of a protein: exhaustive search for permissive sites for duplication by complementation analysis of random fragment libraries of tryptophan synthase alpha subunit.
Journal of molecular biology 2004;335(4):1093-104.
2004: Ohba Yusuke; Terui Yusuke; Kamaike Kazuo; Oshima Tairo; Kawashima Etsuko
Design, synthesis and analysis of a pyrrolepolyamide-nucleoside hybrid.
Nucleic acids symposium series (2004) 2004;(48):55-6.
2003: Aoshima Miho; Ishii Masaharu; Yamagishi Akihiko; Oshima Tairo; Igarashi Yasuo
Metabolic characteristics of an isocitrate dehydrogenase defective derivative of escherichia coli BL21(DE3).
Biotechnology and bioengineering 2003;84(6):732-7.
2003: Yokobori Shin-ichi; Watanabe Yukari; Oshima Tairo
Mitochondrial genome of Ciona savignyi (Urochordata, Ascidiacea, Enterogona): comparison of gene arrangement and tRNA genes with Halocynthia roretzi mitochondrial genome.
Journal of molecular evolution 2003;57(5):574-87.
2003: Nemoto Naoki; Shida Yasuo; Shimada Haruo; Oshima Tairo; Yamagishi Akihiko
Characterization of the precursor of tetraether lipid biosynthesis in the thermoacidophilic archaeon Thermoplasma acidophilum.
Extremophiles : life under extreme conditions 2003;7(3):235-43.
2003: Kawashima Etsuko; Itoh Daisuke; Kamaike Kazuo; Terui Yusuke; Oshima Tairo
Synthesis and analysis of nucleosides bearing pyrrolepolyamide binding to DNA.
Nucleosides, nucleotides & nucleic acids 2003;22(5-8):1309-11.
2003: Nemoto Naoki; Oshima Tairo; Yamagishi Akihiko
Purification and characterization of geranylgeranylglyceryl phosphate synthase from a thermoacidophilic archaeon, Thermoplasma acidophilum.
Journal of biochemistry 2003;133(5):651-7.
2003: Nimura Noriyuki; Fujiwara Takako; Watanabe Aya; Sekine Masae; Furuchi Takemitsu; Yohda Masafumi; Yamagishi Akihiko; Oshima Tairo; Homma Hiroshi
A novel chiral thiol reagent for automated precolumn derivatization and high-performance liquid chromatographic enantioseparation of amino acids and its application to the aspartate racemase assay.
Analytical biochemistry 2003;315(2):262-9.
2003: Uzawa Taketoshi; Yamagishi Akihiko; Oshima Tairo
Continuous cell-free protein synthesis directed by messenger DNA and catalyzed by extract of Thermus thermophilus HB27.
Bioscience, biotechnology, and biochemistry 2003;67(3):639-42.
2003: Ohba Yusuke; Kamaike Kazuo; Terui Yusuke; Oshima Tairo; Kawashima Etsuko
Design, synthesis and analysis of antiviral nucleosides bearing pyrrolepolyamide binding to nucleic acid (II): N2-pyrrolepolyamidopropylguanosine.
Nucleic acids research. Supplement (2001) 2003;(3):29-30.
2002: Kobayashi Kensei; Takano Yoshinori; Masuda Hitomi; Tonishi Hisako; Kaneko Takeo; Nakagawa Kazumichi; Hashimoto Hirofumi; Sugita Seiji; Oshima Tairo; Yamashita Masamichi
[Formation and decomposition of organic compounds by ultraviolet light in simulated interstellar environments]
Uchu Seibutsu Kagaku 2002;16(3):141-2.
2002: Ishida Masami; Oshima Tairo; Yutani Katsuhide
Overexpression in Escherichia coli of the AT-rich trpA and trpB genes from the hyperthermophilic archaeon Pyrococcus furiosus.
FEMS microbiology letters 2002;216(2):179-83.
2002: Shigi Naoki; Suzuki Tsutomu; Tamakoshi Masatada; Oshima Tairo; Watanabe Kimitsuna
Conserved bases in the TPsi C loop of tRNA are determinants for thermophile-specific 2-thiouridylation at position 54.
The Journal of biological chemistry 2002;277(42):39128-35.
2002: Ishida Masami; Oshima Tairo
Effective structure of a leader open reading frame for enhancing the expression of GC-rich genes.
Journal of biochemistry 2002;132(1):63-70.
2002: Nureki Osamu; Shirouzu Mikako; Hashimoto Kyoko; Ishitani Ryuichiro; Terada Takaho; Tamakoshi Masatada; Oshima Tairo; Chijimatsu Masao; Takio Koji; Vassylyev Dmitry G; Shibata Takehiko; Inoue Yorinao; Kuramitsu Seiki; Yokoyama Shigeyuki
An enzyme with a deep trefoil knot for the active-site architecture.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 7):1129-37.
2002: Suzuki Toshiharu; Yasugi Masako; Arisaka Fumio; Oshima Tairo; Yamagishi Akihiko
Cold-adaptation mechanism of mutant enzymes of 3-isopropylmalate dehydrogenase from Thermus thermophilus.
Protein engineering 2002;15(6):471-6.
2002: Uzawa Taketoshi; Yamagishi Akihiko; Oshima Tairo
Polypeptide synthesis directed by DNA as a messenger in cell-free polypeptide synthesis by extreme thermophiles, Thermus thermophilus HB27 and Sulfolobus tokodaii strain 7.
Journal of biochemistry 2002;131(6):849-53.
2002: Yokobori Shin-ichi; Oshima Tairo
[Evolution of genome structure and genetic code of metazoan mitochondria]
Nippon rinsho. Japanese journal of clinical medicine 2002;60 Suppl 4():17-23.
2002: Tomita Kozo; Yokobori Shin-ichi; Oshima Tairo; Ueda Takuya; Watanabe Kimitsuna
The cephalopod Loligo bleekeri mitochondrial genome: multiplied noncoding regions and transposition of tRNA genes.
Journal of molecular evolution 2002;54(4):486-500.
2002: Hori Hiroyuki; Suzuki Tsutomu; Sugawara Kazumasa; Inoue Yorinao; Shibata Takehiko; Kuramitsu Seiki; Yokoyama Shigeyuki; Oshima Tairo; Watanabe Kimitsuna
Identification and characterization of tRNA (Gm18) methyltransferase from Thermus thermophilus HB8: domain structure and conserved amino acid sequence motifs.
Genes to cells : devoted to molecular & cellular mechanisms 2002;7(3):259-72.
2002: Kon Takahide; Nemoto Naoki; Oshima Tairo; Yamagishi Akihiko
Effects of a squalene epoxidase inhibitor, terbinafine, on ether lipid biosyntheses in a thermoacidophilic archaeon, Thermoplasma acidophilum.
Journal of bacteriology 2002;184(5):1395-401.
2002: Suzuki Toshiharu; Iwasaki Toshio; Uzawa Taketoshi; Hara Kurt; Nemoto Naoki; Kon Takahide; Ueki Toshiaki; Yamagishi Akihiko; Oshima Tairo
Sulfolobus tokodaii sp. nov. (f. Sulfolobus sp. strain 7), a new member of the genus Sulfolobus isolated from Beppu Hot Springs, Japan.
Extremophiles : life under extreme conditions 2002;6(1):39-44.
2002: Watanabe Yoh-ichi; Yokobori Shin-ichi; Inaba Toshiro; Yamagishi Akihiko; Oshima Tairo; Kawarabayasi Yutaka; Kikuchi Hisasi; Kita Kiyoshi
Introns in protein-coding genes in Archaea.
FEBS letters 2002;510(1-2):27-30.
2002: Shimada Haruo; Nemoto Naoki; Shida Yasuo; Oshima Tairo; Yamagishi Akihiko
Complete polar lipid composition of Thermoplasma acidophilum HO-62 determined by high-performance liquid chromatography with evaporative light-scattering detection.
Journal of bacteriology 2002;184(2):556-63.
2001: Motono C; Oshima T; Yamagishi A
High thermal stability of 3-isopropylmalate dehydrogenase from Thermus thermophilus resulting from low DeltaC(p) of unfolding.
Protein engineering 2001;14(12):961-6.
2001: Yasugi M; Suzuki T; Yamagishi A; Oshima T
Analysis of the effect of accumulation of amino acid replacements on activity of 3-isopropylmalate dehydrogenase from Thermus thermophilus.
Protein engineering 2001;14(8):601-7.
2001: Miyazaki J; Nakaya S; Suzuki T; Tamakoshi M; Oshima T; Yamagishi A
Ancestral residues stabilizing 3-isopropylmalate dehydrogenase of an extreme thermophile: experimental evidence supporting the thermophilic common ancestor hypothesis.
Journal of biochemistry 2001;129(5):777-82.
2001: Yasugi M; Amino M; Suzuki T; Oshima T; Yamagishi A
Cold adaptation of the thermophilic enzyme 3-isopropylmalate dehydrogenase.
Journal of biochemistry 2001;129(3):477-84.
2001: Numata K; Hayashi-Iwasaki Y; Kawaguchi J; Sakurai M; Moriyama H; Tanaka N; Oshima T
Thermostabilization of a chimeric enzyme by residue substitutions: four amino acid residues in loop regions are responsible for the thermostability of Thermus thermophilus isopropylmalate dehydrogenase.
Biochimica et biophysica acta 2001;1545(1-2):174-83.
2001: Tamakoshi M; Nakano Y; Kakizawa S; Yamagishi A; Oshima T
Selection of stabilized 3-isopropylmalate dehydrogenase of Saccharomyces cerevisiae using the host-vector system of an extreme thermophile, Thermus thermophilus.
Extremophiles : life under extreme conditions 2001;5(1):17-22.
2001: Suzuki T; Yasugi M; Arisaka F; Yamagishi A; Oshima T
Adaptation of a thermophilic enzyme, 3-isopropylmalate dehydrogenase, to low temperatures.
Protein engineering 2001;14(2):85-91.
2001: Hirose R; Suzuki T; Moriyama H; Sato T; Yamagishi A; Oshima T; Tanaka N
Crystal structures of mutants of Thermus thermophilus IPMDH adapted to low temperatures.
Protein engineering 2001;14(2):81-4.
2001: Long Z; Lee J A; Okamoto T; Sekine M; Nimura N; Imai K; Yohda M; Maruyama T; Sumi M; Kamo N; Yamagishi A; Oshima T; Homma H
Occurrence of D-Amino Acids and a pyridoxal 5'-phosphate-dependent aspartate racemase in the acidothermophilic archaeon, Thermoplasma acidophilum.
Biochemical and biophysical research communications 2001;281(2):317-21.
2001: Qu C; Akanuma S; Tanaka N; Moriyama H; Oshima T
Design, X-ray crystallography, molecular modelling and thermal stability studies of mutant enzymes at site 172 of 3-isopropylmalate dehydrogenase from Thermus thermophilus.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 2):225-32.
2001: Shimada H; Shida Y; Nemoto N; Oshima T; Yamagishi A
Quinone profiles of Thermoplasma acidophilum HO-62.
Journal of bacteriology 2001;183(4):1462-5.
2001: Iwasaki T; Oshima T
Ferredoxin and related enzymes from Sulfolobus.
Methods in enzymology 2001;334():3-22.
2000: Hori T; Moriyama H; Kawaguchi J; Hayashi-Iwasaki Y; Oshima T; Tanaka N
The initial step of the thermal unfolding of 3-isopropylmalate dehydrogenase detected by the temperature-jump Laue method.
Protein engineering 2000;13(8):527-33.
2000: Tamakoshi M; Oshima T
[Evolutionary molecular engineering for enzymes]
Seikagaku. The Journal of Japanese Biochemical Society 2000;72(5):376-9.
2000: Nurachman Z; Akanuma S; Sato T; Oshima T; Tanaka N
Crystal structures of 3-isopropylmalate dehydrogenases with mutations at the C-terminus: crystallographic analyses of structure-stability relationships.
Protein engineering 2000;13(4):253-8.
2000: Hayashi-Iwasaki Y; Oshima T
Purification and characterization of recombinant 3-isopropylmalate dehydrogenases from Thermus thermophilus and other microorganisms.
Methods in enzymology 2000;324():301-22.
1999: Numata K; Hayashiiwasaki Y; Yutani K; Oshima T
Studies on interdomain interaction of 3-isopropylmalate dehydrogenase from an extreme thermophile, Thermus thermophilus, by constructing chimeric enzymes.
Extremophiles : life under extreme conditions 1999;3(4):259-62.
1999: Tamakoshi M; Yaoi T; Oshima T; Yamagishi A
An efficient gene replacement and deletion system for an extreme thermophile, Thermus thermophilus.
FEMS microbiology letters 1999;173(2):431-7.
1999: Akanuma S; Yamagishi A; Tanaka N; Oshima T
Further improvement of the thermal stability of a partially stabilized Bacillus subtilis 3-isopropylmalate dehydrogenase variant by random and site-directed mutagenesis.
European journal of biochemistry / FEBS 1999;260(2):499-504.
1999: Shinzato N; Matsumoto T; Yamaoka I; Oshima T; Yamagishi A
Phylogenetic diversity of symbiotic methanogens living in the hindgut of the lower termite Reticulitermes speratus analyzed by PCR and in situ hybridization.
Applied and environmental microbiology 1999;65(2):837-40.
1999: Motono C; Yamagishi A; Oshima T
Urea-induced unfolding and conformational stability of 3-isopropylmalate dehydrogenase from the Thermophile thermus thermophilus and its mesophilic counterpart from Escherichia coli.
Biochemistry 1999;38(4):1332-7.
1998: Wakagi T; Oshima T; Imamura H; Matsuzawa H
Cloning of the gene for inorganic pyrophosphatase from a thermoacidophilic archaeon, Sulfolobus sp. strain 7, and overproduction of the enzyme by coexpression of tRNA for arginine rare codon.
Bioscience, biotechnology, and biochemistry 1998;62(12):2408-14.
1998: Tamakoshi M; Yamagishi A; Oshima T
The organization of the leuC, leuD and leuB genes of the extreme thermophile Thermus thermophilus.
Gene 1998;222(1):125-32.
1998: Suzuki T; Moriyama H; Hirose R; Sakurai M; Tanaka N; Oshima T
Crystallization and preliminary X-ray studies on the hyperstable 3-isopropylmalate dehydrogenase from the thermoacidophilic archaeon Sulfolobus sp. strain 7.
Acta crystallographica. Section D, Biological crystallography 1998;54(Pt 3):444-5.
1998: Akanuma S; Yamagishi A; Tanaka N; Oshima T
Serial increase in the thermal stability of 3-isopropylmalate dehydrogenase from Bacillus subtilis by experimental evolution.
Protein science : a publication of the Protein Society 1998;7(3):698-705.
1997: Iwasaki T; Oshima T
A stable intermediate product of the archaeal zinc-containing 7Fe ferredoxin from Sulfolobus sp. strain 7 by artificial oxidative conversion.
FEBS letters 1997;417(2):223-6.
1997: Ishida M; Yoshida M; Oshima T
Highly efficient production of enzymes of an extreme thermophile, Thermus thermophilus: A practical method to overexpress GC-rich genes in Escherichia coli.
Extremophiles : life under extreme conditions 1997;1(3):157-62.
1997: Tamakoshi M; Uchida M; Tanabe K; Fukuyama S; Yamagishi A; Oshima T
A new Thermus-Escherichia coli shuttle integration vector system.
Journal of bacteriology 1997;179(15):4811-4.
1997: Aoshima M; Oshima T
Purification and characterization of isocitrate dehydrogenase from a hyperthermophilic archaebacterium, Caldococcus noboribetus.
Biochimica et biophysica acta 1997;1340(2):227-34.
1997: Suzuki T; Tanaka Y; Ishida M; Ishizuka M; Yamagishi A; Oshima T
Screening of a mutant plasmid with high expression efficiency of GC-rich leuB gene of an extreme thermophile, Thermus thermophilus, in Escherichia coli.
Journal of biochemistry 1997;121(6):1031-4.
1997: Akanuma S; Qu C; Yamagishi A; Tanaka N; Oshima T
Effect of polar side chains at position 172 on thermal stability of 3-isopropylmalate dehydrogenase from Thermus thermophilus.
FEBS letters 1997;410(2-3):141-4.
1997: Aoshima M; Oshima T
Stabilization of Escherichia coli isopropylmalate dehydrogenase by single amino acid substitution.
Protein engineering 1997;10(3):249-54.
1997: Yamagishi A; Oshima T
[What we can learn from the whole genome sequence of an archaeon Methanococcus jannaschii]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1997;42(2):174-7.
1997: Suzuki T; Inoki Y; Yamagishi A; Iwasaki T; Wakagi T; Oshima T
Molecular and phylogenetic characterization of isopropylmalate dehydrogenase of a thermoacidophilic archaeon, Sulfolobus sp. strain 7.
Journal of bacteriology 1997;179(4):1174-9.
1997: Iwasaki T; Suzuki T; Kon T; Imai T; Urushiyama A; Ohmori D; Oshima T
Novel zinc-containing ferredoxin family in thermoacidophilic archaea.
The Journal of biological chemistry 1997;272(6):3453-8.
1997: Yaoi T; Miyazaki K; Oshima T
Substrate recognition of isocitrate dehydrogenase and 3-isopropylmalate dehydrogenase from Thermus thermophilus HB8.
Journal of biochemistry 1997;121(1):77-81.
1997: Qu C; Akanuma S; Moriyama H; Tanaka N; Oshima T
A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase.
Protein engineering 1997;10(1):45-52.
1996: Yaoi T; Hayashi-Iwasaki Y; Oshima T
Electrostatic interaction between two domains of isocitrate dehydrogenase from Thermus thermophilus is important for the catalytic function and protein stability.
FEBS letters 1996;398(2-3):228-30.
1996: Aoshima M; Yamagishi A; Oshima T
Eubacteria-type isocitrate dehydrogenase from an archaeon: cloning, sequencing, and expression of a gene encoding isocitrate dehydrogenase from a hyperthermophilic archaebacterium, Caldococcus noboribetus.
Archives of biochemistry and biophysics 1996;336(1):77-85.
1996: Aoshima M; Nishibe Y; Hasegawa M; Yamagishi A; Oshima T
Cloning and sequencing of a gene encoding 16S ribosomal RNA from a novel hyperthermophilic archaebacterium NC12.
Gene 1996;180(1-2):183-7.
1996: Iwasaki T; Imai T; Urushiyama A; Oshima T
Redox-linked ionization of sulredoxin, an archaeal Rieske-type [2Fe-2S] protein from Sulfolobus sp. strain 7.
The Journal of biological chemistry 1996;271(44):27659-63.
1996: Iwasaki T; Oshima T
Role of cytochrome b562 in the archaeal aerobic respiratory chain of Sulfolobus sp. strain 7.
FEMS microbiology letters 1996;144(2-3):259-66.
1996: Akanuma S; Yamagishi A; Tanaka N; Oshima T
Spontaneous tandem sequence duplications reverse the thermal stability of carboxyl-terminal modified 3-isopropylmalate dehydrogenase.
Journal of bacteriology 1996;178(21):6300-4.
1996: Zhang Q; Iwasaki T; Wakagi T; Oshima T
2-oxoacid:ferredoxin oxidoreductase from the thermoacidophilic archaeon, Sulfolobus sp. strain 7.
Journal of biochemistry 1996;120(3):587-99.
1996: Wakagi T; Fujii T; Oshima T
Molecular cloning, sequencing, and heterologous expression of a novel zinc-containing ferredoxin gene from a thermoacidophilic Archaeon Sulfolobus sp. strain 7.
Biochemical and biophysical research communications 1996;225(2):489-93.
1996: Nagata C; Moriyama H; Tanaka N; Nakasako M; Yamamoto M; Ueki T; Oshima T
Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.
Acta crystallographica. Section D, Biological crystallography 1996;52(Pt 4):623-30.
1996: Yamagishi A; Tanimoto T; Suzuki T; Oshima T
Pyrimidine biosynthesis genes (pyrE and pyrF) of an extreme thermophile, Thermus thermophilus.
Applied and environmental microbiology 1996;62(6):2191-4.
1996: Yaoi T; Miyazaki K; Oshima T; Komukai Y; Go M
Conversion of the coenzyme specificity of isocitrate dehydrogenase by module replacement.
Journal of biochemistry 1996;119(5):1014-8.
1996: Hayashi-Iwasaki Y; Numata K; Yamagishi A; Yutani K; Sakurai M; Tanaka N; Oshima T
A stable intermediate in the thermal unfolding process of a chimeric 3-isopropylmalate dehydrogenase between a thermophilic and a mesophilic enzymes.
Protein science : a publication of the Protein Society 1996;5(3):511-6.
1996: Kotsuka T; Akanuma S; Tomuro M; Yamagishi A; Oshima T
Further stabilization of 3-isopropylmalate dehydrogenase of an extreme thermophile, Thermus thermophilus, by a suppressor mutation method.
Journal of bacteriology 1996;178(3):723-7.
1996: Sakurai M; Ohzeki M; Miyazaki K; Moriyama H; Sato M; Tanaka N; Oshima T
Structure of a loop-deleted variant of 3-isopropylmalate dehydrogenase from Thermus thermophilus: an internal reprieve tolerance mechanism.
Acta crystallographica. Section D, Biological crystallography 1996;52(Pt 1):124-8.
1995: Iwasaki T; Wakagi T; Oshima T
Resolution of the aerobic respiratory system of the thermoacidophilic archaeon, Sulfolobus sp. strain 7. III. The archaeal novel respiratory complex II (succinate:caldariellaquinone oxidoreductase complex) inherently lacks heme group.
The Journal of biological chemistry 1995;270(52):30902-8.
1995: Iwasaki T; Wakagi T; Isogai Y; Iizuka T; Oshima T
Resolution of the aerobic respiratory system of the thermoacidophilic archaeon, Sulfolobus sp. strain 7. II. Characterization of the archaeal terminal oxidase subcomplexes and implication for the intramolecular electron transfer.
The Journal of biological chemistry 1995;270(52):30893-901.
1995: Iwasaki T; Matsuura K; Oshima T
Resolution of the aerobic respiratory system of the thermoacidophilic archaeon, Sulfolobus sp. strain 7. I. The archaeal terminal oxidase supercomplex is a functional fusion of respiratory complexes III and IV with no c-type cytochromes.
The Journal of biological chemistry 1995;270(52):30881-92.
1995: Kadono S; Sakurai M; Moriyama H; Sato M; Hayashi Y; Oshima T; Tanaka N
Ligand-induced changes in the conformation of 3-isopropylmalate dehydrogenase from Thermus thermophilus.
Journal of biochemistry 1995;118(4):745-52.
1995: Ohzeki M; Yaoi T; Moriyama H; Oshima T; Tanaka N
Crystallization and preliminary X-ray studies of isocitrate dehydrogenase from Thermus thermophilus HB8.
Journal of biochemistry 1995;118(4):679-80.
1995: Yasuda M; Oyaizu H; Yamagishi A; Oshima T
Morphological variation of new Thermoplasma acidophilum isolates from Japanese hot springs.
Applied and environmental microbiology 1995;61(9):3482-5.
1995: Yoda E; Anraku Y; Kirino H; Wakagi T; Oshima T
Purification and characterization of 3-isopropylmalate dehydrogenase from a thermoacidophilic archaebacterium Sulfolobus sp. strain 7.
FEMS microbiology letters 1995;131(3):243-7.
1995: Sakurai M; Moriyama H; Onodera K; Kadono S; Numata K; Hayashi Y; Kawaguchi J; Yamagishi A; Oshima T; Tanaka N
The crystal structure of thermostable mutants of chimeric 3-isopropylmalate dehydrogenase, 2T2M6T.
Protein engineering 1995;8(8):763-7.
1995: Iwasaki T; Wakagi T; Oshima T
Ferredoxin-dependent redox system of a thermoacidophilic archaeon, Sulfolobus sp. strain 7. Purification and characterization of a novel reduced ferredoxin-reoxidizing iron-sulfur flavoprotein.
The Journal of biological chemistry 1995;270(30):17878-83.
1995: Tamakoshi M; Yamagishi A; Oshima T
Screening of stable proteins in an extreme thermophile, Thermus thermophilus.
Molecular microbiology 1995;16(5):1031-6.
1995: Yaoi T; Miyazaki K; Oshima T
His273 of 3-isopropylmalate dehydrogenase from Thermus thermophilus HB8 is involved in the coenzyme binding.
Biochemical and biophysical research communications 1995;210(3):733-7.
1995: Iwasaki T; Isogai Y; Iizuka T; Oshima T
Sulredoxin: a novel iron-sulfur protein of the thermoacidophilic archaeon Sulfolobus sp. strain 7 with a Rieske-type [2Fe-2S] center.
Journal of bacteriology 1995;177(9):2576-82.
1995: Moriyama H; Onodera K; Sakurai M; Tanaka N; Kirino-Kagawa H; Oshima T; Katsube Y
The crystal structures of mutated 3-isopropylmalate dehydrogenase from Thermus thermophilus HB8 and their relationship to the thermostability of the enzyme.
Journal of biochemistry 1995;117(2):408-13.
1995: Kim Y W; Yasuda M; Yamagishi A; Oshima T; Ohta S
Characterization of the endosymbiont of a deep-sea bivalve, Calyptogena soyoae.
Applied and environmental microbiology 1995;61(2):823-7.
1995: Iwasaki T; Fujii T; Wakagi T; Oshima T
Alternative form of the dicluster ferredoxin from the thermoacidophilic archaeon, Sulfolobus sp. strain 7.
Biochemical and biophysical research communications 1995;206(2):563-9.
1995: Numata K; Muro M; Akutsu N; Nosoh Y; Yamagishi A; Oshima T
Thermal stability of chimeric isopropylmalate dehydrogenase genes constructed from a thermophile and a mesophile.
Protein engineering 1995;8(1):39-43.
1994: Yaoi T; Miyazaki K; Oshima T
Roles of Arg231 and Tyr284 of Thermus thermophilus isocitrate dehydrogenase in the coenzyme specificity.
FEBS letters 1994;355(2):171-2.
1994: Iwasaki T; Wakagi T; Isogai Y; Tanaka K; Iizuka T; Oshima T
Functional and evolutionary implications of a [3Fe-4S] cluster of the dicluster-type ferredoxin from the thermoacidophilic archaeon, Sulfolobus sp. strain 7.
The Journal of biological chemistry 1994;269(47):29444-50.
1994: Oshima T
[Hyperthermophiles and early evolution of life]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1994;39(15):2406-7.
1994: Miyazaki K; Yaoi T; Oshima T
Expression, purification, and substrate specificity of isocitrate dehydrogenase from Thermus thermophilus HB8.
European journal of biochemistry / FEBS 1994;221(3):899-903.
1994: Ishida M; Oshima T
Overexpression of genes of an extreme thermophile Thermus thermophilus, in Escherichia coli cells.
Journal of bacteriology 1994;176(9):2767-70.
1994: Yamagishi A; Miyazaki K; Oshima T
[Getting mutated proteins]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1994;39(7):1358-65.
1994: Oshima T
[Structure and function of proteins]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1994;39(7):1091-3.
1994: Uzawa T; Yamagishi A; Nishikawa K; Oshima T
Effects of unusual polyamines on phenylalanyl-tRNA formation.
Journal of biochemistry 1994;115(5):830-2.
1994: Onodera K; Sakurai M; Moriyama H; Tanaka N; Numata K; Oshima T; Sato M; Katsube Y
Three-dimensional structures of chimeric enzymes between Bacillus subtilis and Thermus thermophilus 3-isopropylmalate dehydrogenases.
Protein engineering 1994;7(4):453-9.
1994: Miyazaki K; Oshima T
Co-enzyme specificity of 3-isopropylmalate dehydrogenase from Thermus thermophilus HB8.
Protein engineering 1994;7(3):401-3.
1994: Kirino H; Aoki M; Aoshima M; Hayashi Y; Ohba M; Yamagishi A; Wakagi T; Oshima T
Hydrophobic interaction at the subunit interface contributes to the thermostability of 3-isopropylmalate dehydrogenase from an extreme thermophile, Thermus thermophilus.
European journal of biochemistry / FEBS 1994;220(1):275-81.
1994: Miyazaki K; Kadono S; Sakurai M; Moriyama H; Tanaka N; Oshima T
Chemical modification and site-directed mutagenesis of Tyr36 of 3-isopropylmalate dehydrogenase from Thermus thermophilus HB8.
Protein engineering 1994;7(1):99-102.
1993: Uzawa T; Yamagishi A; Ueda T; Chikazumi N; Watanabe K; Oshima T
Effects of polyamines on a continuous cell-free protein synthesis system of an extreme thermophile, Thermus thermophilus.
Journal of biochemistry 1993;114(5):732-4.
1993: Miyazaki K; Oshima T
Tyr-139 in Thermus thermophilus 3-isopropylmalate dehydrogenase is involved in catalytic function.
FEBS letters 1993;332(1-2):37-8.
1993: Miyazaki K; Kakinuma K; Terasawa H; Oshima T
Kinetic analysis on the substrate specificity of 3-isopropylmalate dehydrogenase.
FEBS letters 1993;332(1-2):35-6.
1993: Uzawa T; Hamasaki N; Oshima T
Effects of novel polyamines on cell-free polypeptide synthesis catalyzed by Thermus thermophilus HB8 extract.
Journal of biochemistry 1993;114(4):478-86.
1993: Amano T; Wakagi T; Oshima T
An ecto-enzyme from Sulfolobus acidocaldarius strain 7 which catalyzes hydrolysis of inorganic pyrophosphate, ATP, and ADP: purification and characterization.
Journal of biochemistry 1993;114(3):329-33.
1993: Kondo S; Yamagishi A; Oshima T
A physical map of the sulfur-dependent archaebacterium Sulfolobus acidocaldarius 7 chromosome.
Journal of bacteriology 1993;175(5):1532-6.
1992: Sakurai M; Onodera K; Moriyama H; Matsumoto O; Tanaka N; Numata K; Imada K; Sato M; Katsube Y; Oshima T
Crystallization and preliminary X-ray studies of a Bacillus subtilis and Thermus thermophilus HB8 chimeric 3-isopropylmalate dehydrogenase and thermostable mutants of it.
Journal of biochemistry 1992;112(2):173-4.
1992: Wakagi T; Lee C H; Oshima T
An extremely stable inorganic pyrophosphatase purified from the cytosol of a thermoacidophilic archaebacterium, Sulfolobus acidocaldarius strain 7.
Biochimica et biophysica acta 1992;1120(3):289-96.
1992: Kirino H; Yamagishi A; Oshima T
[Thermal stabilization of enzyme proteins]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1992;37(3 Suppl):335-45.
1992: Miyazaki K; Eguchi H; Yamagishi A; Wakagi T; Oshima T
Molecular cloning of the isocitrate dehydrogenase gene of an extreme thermophile, Thermus thermophilus HB8.
Applied and environmental microbiology 1992;58(1):93-8.
1991: Kondo S; Yamagishi A; Oshima T
Positive selection for uracil auxotrophs of the sulfur-dependent thermophilic archaebacterium Sulfolobus acidocaldarius by use of 5-fluoroorotic acid.
Journal of bacteriology 1991;173(23):7698-700.
1991: Tsutsumi S; Denda K; Yokoyama K; Oshima T; Date T; Yoshida M
Molecular cloning of genes encoding major two subunits of a eubacterial V-type ATPase from Thermus thermophilus.
Biochimica et biophysica acta 1991;1098(1):13-20.
1991: Fujii T; Moriyama H; Takenaka A; Tanaka N; Wakagi T; Oshima T
Crystallization and preliminary X-ray studies on Sulfolobus acidocaldarius ferredoxin.
Journal of biochemistry 1991;110(4):472-3.
1991: Kirino H; Oshima T
Molecular cloning and nucleotide sequence of 3-isopropylmalate dehydrogenase gene (leuB) from an extreme thermophile, Thermus aquaticus YT-1.
Journal of biochemistry 1991;109(6):852-7.
1991: Xu X M; Koyama N; Cui M; Yamagishi A; Nosoh Y; Oshima T
Nucleotide sequence of the gene encoding NADH dehydrogenase from an alkalophile, Bacillus sp. strain YN-1.
Journal of biochemistry 1991;109(5):678-83.
1991: Xu J; Oshima T; Yoshida M
Phosphoenolpyruvate-insensitive phosphofructokinase isozyme from Thermus thermophilus HB8.
Journal of biochemistry 1991;109(2):199-203.
1991: Onodera K; Moriyama H; Takenaka A; Tanaka N; Akutsu N; Muro M; Oshima T; Imada K; Sato M; Katsube Y
Crystallization and preliminary X-ray studies of a Bacillus subtilis and Thermus thermophilus HB8 chimeric 3-isopropylmalate dehydrogenase.
Journal of biochemistry 1991;109(1):1-2.
1990: Yokoyama K; Oshima T; Yoshida M
Thermus thermophilus membrane-associated ATPase. Indication of a eubacterial V-type ATPase.
The Journal of biological chemistry 1990;265(35):21946-50.
1990: Denda K; Konishi J; Hajiro K; Oshima T; Date T; Yoshida M
Structure of an ATPase operon of an acidothermophilic archaebacterium, Sulfolobus acidocaldarius.
The Journal of biological chemistry 1990;265(35):21509-13.
1990: Xu J; Oshima T; Yoshida M
Tetramer-dimer conversion of phosphofructokinase from Thermus thermophilus induced by its allosteric effectors.
Journal of molecular biology 1990;215(4):597-606.
1990: Konishi J; Denda K; Oshima T; Wakagi T; Uchida E; Ohsumi Y; Anraku Y; Matsumoto T; Wakabayashi T; Mukohata Y
Archaebacterial ATPases: relationship to other ion-translocating ATPase families examined in terms of immunological cross-reactivity.
Journal of biochemistry 1990;108(4):554-9.
1990: Yamada T; Akutsu N; Miyazaki K; Kakinuma K; Yoshida M; Oshima T
Purification, catalytic properties, and thermal stability of threo-Ds-3-isopropylmalate dehydrogenase coded by leuB gene from an extreme thermophile, Thermus thermophilus strain HB8.
Journal of biochemistry 1990;108(3):449-56.
1990: Kirino H; Kuwahara R; Hamasaki N; Oshima T
Effect of unusual polyamines on cleavage of DNA by restriction enzymes.
Journal of biochemistry 1990;107(5):661-5.
1990: Yamagishi A; Oshima T
Circular chromosomal DNA in the sulfur-dependent archaebacterium Sulfolobus acidocaldarius.
Nucleic acids research 1990;18(5):1133-6.
1989: Wakagi T; Yamauchi T; Oshima T; Müller M; Azzi A; Sone N
A novel a-type terminal oxidase from Sulfolobus acidocaldarius with cytochrome c oxidase activity.
Biochemical and biophysical research communications 1989;165(3):1110-4.
1989: Denda K; Konishi J; Oshima T; Date T; Yoshida M
A gene encoding the proteolipid subunit of Sulfolobus acidocaldarius ATPase complex.
The Journal of biological chemistry 1989;264(13):7119-21.
1989: Eguchi H; Wakagi T; Oshima T
A highly stable NADP-dependent isocitrate dehydrogenase from Thermus thermophilus HB8: purification and general properties.
Biochimica et biophysica acta 1989;990(2):133-7.
1988: Denda K; Konishi J; Oshima T; Date T; Yoshida M
Molecular cloning of the beta-subunit of a possible non-F0F1 type ATP synthase from the acidothermophilic archaebacterium, Sulfolobus acidocaldarius.
The Journal of biological chemistry 1988;263(33):17251-4.
1988: Denda K; Konishi J; Oshima T; Date T; Yoshida M
The membrane-associated ATPase from Sulfolobus acidocaldarius is distantly related to F1-ATPase as assessed from the primary structure of its alpha-subunit.
The Journal of biological chemistry 1988;263(13):6012-5.
1988: Oshima T; Hamasaki N; Uzawa T
Biochemical properties of unusual polyamines found in an extreme thermophile, Thermus thermophilus.
Advances in experimental medicine and biology 1988;250():633-42.
1987: Konishi J; Wakagi T; Oshima T; Yoshida M
Purification and properties of the ATPase solubilized from membranes of an acidothermophilic archaebacterium, Sulfolobus acidocaldarius.
Journal of biochemistry 1987;102(6):1379-87.
1987: Wakao H; Wakagi T; Oshima T
Purification and properties of NADH dehydrogenase from a thermoacidophilic archaebacterium, Sulfolobus acidocaldarius.
Journal of biochemistry 1987;102(2):255-62.

Sign-in to see more