Preview
Sign-in for full Details 
Sign-in free and Explore the Exciting World of BiomedExperts:
- Over 1.500.000 Profiles
- More than 1.800 Organizations worldwide
- State of the Art Network Visualizations
- Manage your own Profile
- Locate Experts in your Country/Region
- Locate Experts in your 1. and 2. Level Network
- Connect to Experts Worldwide
NetworkView
Julian Parkhill
This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers
together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles
free of charge to researchers worldwide.
Research Profile (preview)
Genes & Molecular Sequences
Concepts & Ideas
Procedures
Phenomena
Occupations
Chemicals & Drugs
Living Beings
Physiology
Sign-in to see full Profile
Network (preview)
28
Quail, Michael
27
Sebaihia, Mohammed
24
Barrell, Bart
24
Cerdeño-Tárraga, Ana
22
Bentley, Stephen
19
Crossman, Lisa
19
Thomson, Nicholas
18
Thomson, Nicholas
16
Dougan, Gordon
14
Holden, Matthew
14
Holden, Matthew
13
Churcher, Carol
12
Mungall, Karen
10
Wain, John
8
Maskell, Duncan
Sign-in to see all Coauthors
Publications
Sign-in to see all Publications
Sign in free and see...
Visualized networks:
See your personal network in
sophisticated graphical views
GeoTargeted Searches:
Locate experts around the world
and connect with global collaborators
Research Profiles:
See the visualized research activity
of experts around the globe
Sign-in to see more
Geonetwork of Julian Parkhill (preview)
Cities where this author has publications
Cities where co-authors of this author have publications
Sign-in to see more
All Publications
-
2009: Lawley Trevor D; Croucher Nicholas J; Yu Lu; Clare Simon; Sebaihia Mohammed; Goulding David; Pickard Derek J; Parkhill Julian; Choudhary Jyoti; Dougan Gordon
Proteomic and genomic characterization of highly infectious Clostridium difficile 630 spores.
Journal of bacteriology 2009;191(17):5377-86.
-
2009: Holt Kathryn E; Teo Yik Y; Li Heng; Nair Satheesh; Dougan Gordon; Wain John; Parkhill Julian
Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA.
Bioinformatics (Oxford, England) 2009;25(16):2074-5.
-
2009: Perkins Timothy T; Kingsley Robert A; Fookes Maria C; Gardner Paul P; James Keith D; Yu Lu; Assefa Samuel A; He Miao; Croucher Nicholas J; Pickard Derek J; Maskell Duncan J; Parkhill Julian; Choudhary Jyoti; Thomson Nicholas R; Dougan Gordon
A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi.
PLoS genetics 2009;5(7):e1000569.
-
2009: Holden Matthew T G; Heather Zoe; Paillot Romain; Steward Karen F; Webb Katy; Ainslie Fern; Jourdan Thibaud; Bason Nathalie C; Holroyd Nancy E; Mungall Karen; Quail Michael A; Sanders Mandy; Simmonds Mark; Willey David; Brooks Karen; Aanensen David M; Spratt Brian G; Jolley Keith A; Maiden Martin C J; Kehoe Michael; Chanter Neil; Bentley Stephen D; Robinson Carl; Maskell Duncan J; Parkhill Julian; Waller Andrew S
Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens.
PLoS pathogens 2009;5(3):e1000346.
-
2009: Croucher Nicholas J; Walker Danielle; Romero Patricia; Lennard Nicola; Paterson Gavin K; Bason Nathalie C; Mitchell Andrea M; Quail Michael A; Andrew Peter W; Parkhill Julian; Bentley Stephen D; Mitchell Tim J
Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81.
Journal of bacteriology 2009;191(5):1480-9.
-
2009: Stabler Richard A; He Miao; Dawson Lisa; Martin Melissa; Valiente Esmeralda; Corton Craig; Lawley Trevor D; Sebaihia Mohammed; Quail Michael A; Rose Graham; Gerding Dale N; Gibert Maryse; Popoff Michel R; Parkhill Julian; Dougan Gordon; Wren Brendan W
Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium.
Genome biology 2009;10(9):R102.
-
2009: Ward Philip N; Holden Matthew T G; Leigh James A; Lennard Nicola; Bignell Alexandra; Barron Andy; Clark Louise; Quail Michael A; Woodward John; Barrell Bart G; Egan Sharon A; Field Terence R; Maskell Duncan; Kehoe Michael; Dowson Christopher G; Chanter Neil; Whatmore Adrian M; Bentley Stephen D; Parkhill Julian
Evidence for niche adaptation in the genome of the bovine pathogen Streptococcus uberis.
BMC genomics 2009;10():54.
-
2009: Holt Kathryn E; Thomson Nicholas R; Wain John; Langridge Gemma C; Hasan Rumina; Bhutta Zulfiqar A; Quail Michael A; Norbertczak Halina; Walker Danielle; Simmonds Mark; White Brian; Bason Nathalie; Mungall Karen; Dougan Gordon; Parkhill Julian
Pseudogene accumulation in the evolutionary histories of Salmonella enterica serovars Paratyphi A and Typhi.
BMC genomics 2009;10():36.
-
2008: Heather Zoe; Holden Matthew T G; Steward Karen F; Parkhill Julian; Song Lijiang; Challis Gregory L; Robinson Carl; Davis-Poynter Nicholas; Waller Andrew S
A novel streptococcal integrative conjugative element involved in iron acquisition.
Molecular microbiology 2008;70(5):1274-92.
-
2008: Carver Tim; Berriman Matthew; Tivey Adrian; Patel Chinmay; Böhme Ulrike; Barrell Barclay G; Parkhill Julian; Rajandream Marie-Adèle
Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database.
Bioinformatics (Oxford, England) 2008;24(23):2672-6.
-
2008: Parkhill Julian
Time to remove the model organism blinkers.
Trends in microbiology 2008;16(11):510-1.
-
2008: Waterfield Nicholas R; Sanchez-Contreras Maria; Eleftherianos Ioannis; Dowling Andrea; Yang Guowei; Wilkinson Paul; Parkhill Julian; Thomson Nicholas; Reynolds Stuart E; Bode Helge B; Dorus Steven; Ffrench-Constant Richard H
Rapid Virulence Annotation (RVA): identification of virulence factors using a bacterial genome library and multiple invertebrate hosts.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(41):15967-72.
-
2008: Brinkman Fiona Sl; Parkhill Julian
Population genomics: modeling the new and a renaissance of the old.
Current opinion in microbiology 2008;11(5):439-41.
-
2008: Letek Michal; Ocampo-Sosa Alain A; Sanders Mandy; Fogarty Ursula; Buckley Tom; Leadon Desmond P; González Patricia; Scortti Mariela; Meijer Wim G; Parkhill Julian; Bentley Stephen; Vázquez-Boland José A
Evolution of the Rhodococcus equi vap pathogenicity island seen through comparison of host-associated vapA and vapB virulence plasmids.
Journal of bacteriology 2008;190(17):5797-805.
-
2008: Klasson Lisa; Walker Thomas; Sebaihia Mohammed; Sanders Mandy J; Quail Michael A; Lord Angela; Sanders Susanne; Earl Julie; O'Neill Scott L; Thomson Nicholas; Sinkins Steven P; Parkhill Julian
Genome evolution of Wolbachia strain wPip from the Culex pipiens group.
Molecular biology and evolution 2008;25(9):1877-87.
-
2008: Holt Kathryn E; Parkhill Julian; Mazzoni Camila J; Roumagnac Philippe; Weill François-Xavier; Goodhead Ian; Rance Richard; Baker Stephen; Maskell Duncan J; Wain John; Dolecek Christiane; Achtman Mark; Dougan Gordon
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi.
Nature genetics 2008;40(8):987-93.
-
2008: Buboltz Anne M; Nicholson Tracy L; Parette Mylisa R; Hester Sara E; Parkhill Julian; Harvill Eric T
Replacement of adenylate cyclase toxin in a lineage of Bordetella bronchiseptica.
Journal of bacteriology 2008;190(15):5502-11.
-
2008: Medini Duccio; Serruto Davide; Parkhill Julian; Relman David A; Donati Claudio; Moxon Richard; Falkow Stanley; Rappuoli Rino
Microbiology in the post-genomic era.
Nature reviews. Microbiology 2008;6(6):419-30.
-
2008: Pearson Melanie M; Sebaihia Mohammed; Churcher Carol; Quail Michael A; Seshasayee Aswin S; Luscombe Nicholas M; Abdellah Zahra; Arrosmith Claire; Atkin Becky; Chillingworth Tracey; Hauser Heidi; Jagels Kay; Moule Sharon; Mungall Karen; Norbertczak Halina; Rabbinowitsch Ester; Walker Danielle; Whithead Sally; Thomson Nicholas R; Rather Philip N; Parkhill Julian; Mobley Harry L T
Complete genome sequence of uropathogenic Proteus mirabilis, a master of both adherence and motility.
Journal of bacteriology 2008;190(11):4027-37.
-
2008: Walker Alan; Parkhill Julian
Single-cell genomics.
Nature reviews. Microbiology 2008;6(3):176-7.
-
2008: Bentley Stephen D; Corton Craig; Brown Susan E; Barron Andrew; Clark Louise; Doggett Jon; Harris Barbara; Ormond Doug; Quail Michael A; May Georgiana; Francis David; Knudson Dennis; Parkhill Julian; Ishimaru Carol A
Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation.
Journal of bacteriology 2008;190(6):2150-60.
-
2008: Vernikos Georgios S; Parkhill Julian
Resolving the structural features of genomic islands: a machine learning approach.
Genome research 2008;18(2):331-42.
-
2008: Thomson Nicholas R; Holden Matthew T G; Carder Caroline; Lennard Nicola; Lockey Sarah J; Marsh Pete; Skipp Paul; O'Connor C David; Goodhead Ian; Norbertzcak Halina; Harris Barbara; Ormond Doug; Rance Richard; Quail Michael A; Parkhill Julian; Stephens Richard S; Clarke Ian N
Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates.
Genome research 2008;18(1):161-71.
-
2008: Hjerde Erik; Lorentzen Marit Sjo; Holden Matthew Tg; Seeger Kathy; Paulsen Steinar; Bason Nathalie; Churcher Carol; Harris David; Norbertczak Halina; Quail Michael A; Sanders Suzanne; Thurston Scott; Parkhill Julian; Willassen Nils Peder; Thomson Nicholas R
The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay.
BMC genomics 2008;9():616.
-
2008: Crossman Lisa C; Castillo-Ramírez Santiago; McAnnula Craig; Lozano Luis; Vernikos Georgios S; Acosta José L; Ghazoui Zara F; Hernández-González Ismael; Meakin Georgina; Walker Alan W; Hynes Michael F; Young J Peter W; Downie J Allan; Romero David; Johnston Andrew W B; Dávila Guillermo; Parkhill Julian; González Víctor
A common genomic framework for a diverse assembly of plasmids in the symbiotic nitrogen fixing bacteria.
PloS one 2008;3(7):e2567.
-
2007: Hiller N Luisa; Janto Benjamin; Hogg Justin S; Boissy Robert; Yu Susan; Powell Evan; Keefe Randy; Ehrlich Nathan E; Shen Kai; Hayes Jay; Barbadora Karen; Klimke William; Dernovoy Dmitry; Tatusova Tatiana; Parkhill Julian; Bentley Stephen D; Post J Christopher; Ehrlich Garth D; Hu Fen Z
Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome.
Journal of bacteriology 2007;189(22):8186-95.
-
2007: Stecher Bärbel; Robbiani Riccardo; Walker Alan W; Westendorf Astrid M; Barthel Manja; Kremer Marcus; Chaffron Samuel; Macpherson Andrew J; Buer Jan; Parkhill Julian; Dougan Gordon; von Mering Christian; Hardt Wolf-Dietrich
Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota.
PLoS biology 2007;5(10):2177-89.
-
2007: Tett Adrian; Spiers Andrew J; Crossman Lisa C; Ager Duane; Ciric Lena; Dow J Maxwell; Fry John C; Harris David; Lilley Andrew; Oliver Anna; Parkhill Julian; Quail Michael A; Rainey Paul B; Saunders Nigel J; Seeger Kathy; Snyder Lori A S; Squares Rob; Thomas Christopher M; Turner Sarah L; Zhang Xue-Xian; Field Dawn; Bailey Mark J
Sequence-based analysis of pQBR103; a representative of a unique, transfer-proficient mega plasmid resident in the microbial community of sugar beet.
The ISME journal 2007;1(4):331-40.
-
2007: Holt Kathryn E; Thomson Nicholas R; Wain John; Phan Minh Duy; Nair Satheesh; Hasan Rumina; Bhutta Zulfiqar A; Quail Michael A; Norbertczak Halina; Walker Danielle; Dougan Gordon; Parkhill Julian
Multidrug-resistant Salmonella enterica serovar paratyphi A harbors IncHI1 plasmids similar to those found in serovar typhi.
Journal of bacteriology 2007;189(11):4257-64.
-
2007: Baker Stephen; Hardy Jonathan; Sanderson Kenneth E; Quail Michael; Goodhead Ian; Kingsley Robert A; Parkhill Julian; Stocker Bruce; Dougan Gordon
A novel linear plasmid mediates flagellar variation in Salmonella Typhi.
PLoS pathogens 2007;3(5):e59.
-
2007: Brosch Roland; Gordon Stephen V; Garnier Thierry; Eiglmeier Karin; Frigui Wafa; Valenti Philippe; Dos Santos Sandrine; Duthoy Stéphanie; Lacroix Céline; Garcia-Pelayo Carmen; Inwald Jacqueline K; Golby Paul; Garcia Javier Nuñez; Hewinson R Glyn; Behr Marcel A; Quail Michael A; Churcher Carol; Barrell Bart G; Parkhill Julian; Cole Stewart T
Genome plasticity of BCG and impact on vaccine efficacy.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(13):5596-601.
-
2007: Bentley Stephen D; Vernikos George S; Snyder Lori A S; Churcher Carol; Arrowsmith Claire; Chillingworth Tracey; Cronin Ann; Davis Paul H; Holroyd Nancy E; Jagels Kay; Maddison Mark; Moule Sharon; Rabbinowitsch Ester; Sharp Sarah; Unwin Louise; Whitehead Sally; Quail Michael A; Achtman Mark; Barrell Bart; Saunders Nigel J; Parkhill Julian
Meningococcal genetic variation mechanisms viewed through comparative analysis of serogroup C strain FAM18.
PLoS genetics 2007;3(2):e23.
-
2007: Stinear Timothy P; Seemann Torsten; Pidot Sacha; Frigui Wafa; Reysset Gilles; Garnier Thierry; Meurice Guillaume; Simon David; Bouchier Christiane; Ma Laurence; Tichit Magali; Porter Jessica L; Ryan Janine; Johnson Paul D R; Davies John K; Jenkin Grant A; Small Pamela L C; Jones Louis M; Tekaia Fredj; Laval Françoise; Daffé Mamadou; Parkhill Julian; Cole Stewart T
Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer.
Genome research 2007;17(2):192-200.
-
2007: Holden Matthew T G; Scott Annabel; Cherevach Inna; Chillingworth Tracey; Churcher Carol; Cronin Ann; Dowd Linda; Feltwell Theresa; Hamlin Nancy; Holroyd Simon; Jagels Kay; Moule Sharon; Mungall Karen; Quail Michael A; Price Claire; Rabbinowitsch Ester; Sharp Sarah; Skelton Jason; Whitehead Sally; Barrell Bart G; Kehoe Michael; Parkhill Julian
Complete genome of acute rheumatic fever-associated serotype M5 Streptococcus pyogenes strain manfredo.
Journal of bacteriology 2007;189(4):1473-7.
-
2007: Didelot Xavier; Achtman Mark; Parkhill Julian; Thomson Nicholas R; Falush Daniel
A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: convergence or divergence by homologous recombination?
Genome research 2007;17(1):61-8.
-
2007: Walker Thomas; Klasson Lisa; Sebaihia Mohammed; Sanders Mandy J; Thomson Nicholas R; Parkhill Julian; Sinkins Steven P
Ankyrin repeat domain-encoding genes in the wPip strain of Wolbachia from the Culex pipiens group.
BMC biology 2007;5():39.
-
2007: Gundogdu Ozan; Bentley Stephen D; Holden Matt T; Parkhill Julian; Dorrell Nick; Wren Brendan W
Re-annotation and re-analysis of the Campylobacter jejuni NCTC11168 genome sequence.
BMC genomics 2007;8():162.
-
2007: Vernikos Georgios S; Thomson Nicholas R; Parkhill Julian
Genetic flux over time in the Salmonella lineage.
Genome biology 2007;8(6):R100.
-
2006: Thomson Nicholas R; Howard Sarah; Wren Brendan W; Holden Matthew T G; Crossman Lisa; Challis Gregory L; Churcher Carol; Mungall Karen; Brooks Karen; Chillingworth Tracey; Feltwell Theresa; Abdellah Zahra; Hauser Heidi; Jagels Kay; Maddison Mark; Moule Sharon; Sanders Mandy; Whitehead Sally; Quail Michael A; Dougan Gordon; Parkhill Julian; Prentice Michael B
The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081.
PLoS genetics 2006;2(12):e206.
-
2006: Fenn Katelyn; Conlon Claire; Jones Martin; Quail Michael A; Holroyd Nancy E; Parkhill Julian; Blaxter Mark
Phylogenetic relationships of the Wolbachia of nematodes and arthropods.
PLoS pathogens 2006;2(10):e94.
-
2006: Dudley Edward G; Thomson Nicholas R; Parkhill Julian; Morin Nicholas P; Nataro James P
Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli.
Molecular microbiology 2006;61(5):1267-82.
-
2006: Vernikos Georgios S; Parkhill Julian
Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands.
Bioinformatics (Oxford, England) 2006;22(18):2196-203.
-
2006: Sebaihia Mohammed; Preston Andrew; Maskell Duncan J; Kuzmiak Holly; Connell Terry D; King Natalie D; Orndorff Paul E; Miyamoto David M; Thomson Nicholas R; Harris David; Goble Arlette; Lord Angela; Murphy Lee; Quail Michael A; Rutter Simon; Squares Robert; Squares Steven; Woodward John; Parkhill Julian; Temple Louise M
Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction.
Journal of bacteriology 2006;188(16):6002-15.
-
2006: Claesson Marcus J; Li Yin; Leahy Sinead; Canchaya Carlos; van Pijkeren Jan Peter; Cerdeño-Tárraga Ana M; Parkhill Julian; Flynn Sarah; O'Sullivan Gerald C; Collins J Kevin; Higgins Des; Shanahan Fergus; Fitzgerald Gerald F; van Sinderen Douwe; O'Toole Paul W
Multireplicon genome architecture of Lactobacillus salivarius.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(17):6718-23.
-
2006: Bentley Stephen D; Aanensen David M; Mavroidi Angeliki; Saunders David; Rabbinowitsch Ester; Collins Matthew; Donohoe Kathy; Harris David; Murphy Lee; Quail Michael A; Samuel Gabby; Skovsted Ian C; Kaltoft Margit Staum; Barrell Bart; Reeves Peter R; Parkhill Julian; Spratt Brian G
Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes.
PLoS genetics 2006;2(3):e31.
-
2005: Froehlich Barbara; Parkhill Julian; Sanders Mandy; Quail Michael A; Scott June R
The pCoo plasmid of enterotoxigenic Escherichia coli is a mosaic cointegrate.
Journal of bacteriology 2005;187(18):6509-16.
-
2005: Wilson William H; Schroeder Declan C; Allen Michael J; Holden Matthew T G; Parkhill Julian; Barrell Bart G; Churcher Carol; Hamlin Nancy; Mungall Karen; Norbertczak Halina; Quail Michael A; Price Claire; Rabbinowitsch Ester; Walker Danielle; Craigon Marie; Roy Douglas; Ghazal Peter
Complete genome sequence and lytic phase transcription profile of a Coccolithovirus.
Science (New York, N.Y.) 2005;309(5737):1090-2.
-
2005: Carver Tim J; Rutherford Kim M; Berriman Matthew; Rajandream Marie-Adele; Barrell Barclay G; Parkhill Julian
ACT: the Artemis Comparison Tool.
Bioinformatics (Oxford, England) 2005;21(16):3422-3.
-
2005: Sinkins Steven P; Walker Thomas; Lynd Amy R; Steven Andrew R; Makepeace Ben L; Godfray H Charles J; Parkhill Julian
Wolbachia variability and host effects on crossing type in Culex mosquitoes.
Nature 2005;436(7048):257-60.
-
2005: Lewis Deborah A; Jones Andrew; Parkhill Julian; Speert David P; Govan John R W; Lipuma John J; Lory Stephen; Webb A Kevin; Mahenthiralingam Eshwar
Identification of DNA markers for a transmissible Pseudomonas aeruginosa cystic fibrosis strain.
American journal of respiratory cell and molecular biology 2005;33(1):56-64.
-
2005: Pain Arnab; Crossman Lisa; Parkhill Julian
Comparative apicomplexan genomics.
Nature reviews. Microbiology 2005;3(6):454-5.
-
2005: Thomson Nicholas R; Yeats Corin; Bell Kenneth; Holden Matthew T G; Bentley Stephen D; Livingstone Morag; Cerdeño-Tárraga Ana M; Harris Barbara; Doggett Jon; Ormond Doug; Mungall Karen; Clarke Kay; Feltwell Theresa; Hance Zahra; Sanders Mandy; Quail Michael A; Price Claire; Barrell Bart G; Parkhill Julian; Longbottom David
The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation.
Genome research 2005;15(5):629-40.
-
2005: Aslett Martin; Mooney Paul; Adlem Ellen; Berriman Matthew; Berry Andrew; Hertz-Fowler Christiane; Ivens Alasdair C; Kerhornou Arnaud; Parkhill Julian; Peacock Chris S; Wood Valerie; Rajandream Marie-Adele; Barrell Bart; Tivey Adrian
Integration of tools and resources for display and analysis of genomic data for protozoan parasites.
International journal for parasitology 2005;35(5):481-93.
-
2005: Sebaihia Mohammed; Thomson Nicholas R; Crossman Lisa; Parkhill Julian
Livelihood hazards.
Nature reviews. Microbiology 2005;3(4):278-9.
-
2005: Cerdeño-Tárraga Ana M; Patrick Sheila; Crossman Lisa C; Blakely Garry; Abratt Val; Lennard Nicola; Poxton Ian; Duerden Brian; Harris Barbara; Quail Mike A; Barron Andrew; Clark Louise; Corton Craig; Doggett Jonathan; Holden Matthew T G; Larke Natasha; Line Alexandra; Lord Angela; Norbertczak Halina; Ormond Doug; Price Claire; Rabbinowitsch Ester; Woodward John; Barrell Bart; Parkhill Julian
Extensive DNA inversions in the B. fragilis genome control variable gene expression.
Science (New York, N.Y.) 2005;307(5714):1463-5.
-
2005: Crossman Lisa; Cerdeño-Tárraga Ana; Parkhill Julian
Diversity at every level.
Nature reviews. Microbiology 2005;3(3):196-7.
-
2005: Thomson Nicholas; Holden Matthew; Parkhill Julian
Brothers in arms.
Nature reviews. Microbiology 2005;3(2):100-1.
-
2005: Ren Chuan-Peng; Beatson Scott A; Parkhill Julian; Pallen Mark J
The Flag-2 locus, an ancestral gene cluster, is potentially associated with a novel flagellar system from Escherichia coli.
Journal of bacteriology 2005;187(4):1430-40.
-
2005: Karlyshev Andrey V; Champion Olivia L; Churcher Carol; Brisson Jean-Robert; Jarrell Harold C; Gilbert Michel; Brochu Denis; St Michael Frank; Li Jianjun; Wakarchuk Warren W; Goodhead Ian; Sanders Mandy; Stevens Kim; White Brian; Parkhill Julian; Wren Brendan W; Szymanski Christine M
Analysis of Campylobacter jejuni capsular loci reveals multiple mechanisms for the generation of structural diversity and the ability to form complex heptoses.
Molecular microbiology 2005;55(1):90-103.
-
2004: Achtman Mark; Morelli Giovanna; Zhu Peixuan; Wirth Thierry; Diehl Ines; Kusecek Barica; Vogler Amy J; Wagner David M; Allender Christopher J; Easterday W Ryan; Chenal-Francisque Viviane; Worsham Patricia; Thomson Nicholas R; Parkhill Julian; Lindler Luther E; Carniel Elisabeth; Keim Paul
Microevolution and history of the plague bacillus, Yersinia pestis.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(51):17837-42.
-
2004: Bentley Stephen; Crossman Lisa; Cerdeño-Tárraga Ana; Parkhill Julian
Genomic pot pourri.
Nature reviews. Microbiology 2004;2(12):928-9.
-
2004: Rhodes Glenn; Parkhill Julian; Bird Christine; Ambrose Kerrie; Jones Matthew C; Huys Geert; Swings Jean; Pickup Roger W
Complete nucleotide sequence of the conjugative tetracycline resistance plasmid pFBAOT6, a member of a group of IncU plasmids with global ubiquity.
Applied and environmental microbiology 2004;70(12):7497-510.
-
2004: Pain Arnab; Bentley Stephen; Parkhill Julian
Eukaryotes: not beyond compare.
Nature reviews. Microbiology 2004;2(11):856-7.
-
2004: Gilmour Matthew W; Thomson Nicholas R; Sanders Mandy; Parkhill Julian; Taylor Diane E
The complete nucleotide sequence of the resistance plasmid R478: defining the backbone components of incompatibility group H conjugative plasmids through comparative genomics.
Plasmid 2004;52(3):182-202.
-
2004: Cerdeño-Tárraga Ana; Thomson Nicholas; Parkhill Julian
Pathogens in decay.
Nature reviews. Microbiology 2004;2(10):774-5.
-
2004: Tettelin Hervé; Parkhill Julian
The use of genome annotation data and its impact on biological conclusions.
Nature genetics 2004;36(10):1028-9.
-
2004: Weinacht Katja G; Roche Hazeline; Krinos Corinna M; Coyne Michael J; Parkhill Julian; Comstock Laurie E
Tyrosine site-specific recombinases mediate DNA inversions affecting the expression of outer surface proteins of Bacteroides fragilis.
Molecular microbiology 2004;53(5):1319-30.
-
2004: Crossman Lisa; Holden Matthew; Pain Arnab; Parkhill Julian
Genomes beyond compare.
Nature reviews. Microbiology 2004;2(8):616-7.
-
2004: Brugirard-Ricaud Karine; Givaudan Alain; Parkhill Julian; Boemare Noel; Kunst Frank; Zumbihl Robert; Duchaud Eric
Variation in the effectors of the type III secretion system among Photorhabdus species as revealed by genomic analysis.
Journal of bacteriology 2004;186(13):4376-81.
-
2004: Cerdeño-Tárraga Ana; Crossman Lisa; Parkhill Julian
New environments, versatile genomes.
Nature reviews. Microbiology 2004;2(6):446-7.
-
2004: Thomson Nicholas; Baker Stephen; Pickard Derek; Fookes Maria; Anjum Muna; Hamlin Nancy; Wain John; House Deborah; Bhutta Zulfiqar; Chan Kaman; Falkow Stanley; Parkhill Julian; Woodward Martin; Ivens Al; Dougan Gordon
The role of prophage-like elements in the diversity of Salmonella enterica serovars.
Journal of molecular biology 2004;339(2):279-300.
-
2004: Pain Arnab; Crossman Lisa; Sebaihia Mohammed; Cerdeño-Tárraga Ana; Parkhill Julian
Strength in diversity.
Nature reviews. Microbiology 2004;2(5):358-9.
-
2004: Dover Lynn G; Cerdeño-Tárraga Ana M; Pallen Mark J; Parkhill Julian; Besra Gurdyal S
Comparative cell wall core biosynthesis in the mycolated pathogens, Mycobacterium tuberculosis and Corynebacterium diphtheriae.
FEMS microbiology reviews 2004;28(2):225-50.
-
2004: Preston Andrew; Parkhill Julian; Maskell Duncan J
The bordetellae: lessons from genomics.
Nature reviews. Microbiology 2004;2(5):379-90.
-
2004: Crossman Lisa; Sebaihia Mohammed; Cerdeño-Tárraga Ana; Parkhill Julian
Sequencing the environment.
Nature reviews. Microbiology 2004;2(3):184-5.
-
2004: Bentley S D; Brown S; Murphy L D; Harris D E; Quail M A; Parkhill J; Barrell B G; McCormick J R; Santamaria R I; Losick R; Yamasaki M; Kinashi H; Chen C W; Chandra G; Jakimowicz D; Kieser H M; Kieser T; Chater K F
SCP1, a 356,023 bp linear plasmid adapted to the ecology and developmental biology of its host, Streptomyces coelicolor A3(2).
Molecular microbiology 2004;51(6):1615-28.
-
2004: Baldwin Adam; Sokol Pamela A; Parkhill Julian; Mahenthiralingam Eshwar
The Burkholderia cepacia epidemic strain marker is part of a novel genomic island encoding both virulence and metabolism-associated genes in Burkholderia cenocepacia.
Infection and immunity 2004;72(3):1537-47.
-
2004: Liu Minghsun; Gingery Mari; Doulatov Sergei R; Liu Yichin; Hodes Asher; Baker Stephen; Davis Paul; Simmonds Mark; Churcher Carol; Mungall Karen; Quail Michael A; Preston Andrew; Harvill Eric T; Maskell Duncan J; Eiserling Frederick A; Parkhill Julian; Miller Jeff F
Genomic and genetic analysis of Bordetella bacteriophages encoding reverse transcriptase-mediated tropism-switching cassettes.
Journal of bacteriology 2004;186(5):1503-17.
-
2004: Holden Matthew; Crossman Lisa; Cerdeño-Tárraga Ana; Parkhill Julian
Pathogenomics of non-pathogens.
Nature reviews. Microbiology 2004;2(2):91.
-
2004: Thomson Nicholas R; Sebaihia Mohammed; Cerdeño-Tárraga Ana M; Holden Matthew T; Parkhill Julian
Shrinking genomics.
Nature reviews. Microbiology 2004;2(1):11.
-
2004: Hertz-Fowler Christiane; Peacock Chris S; Wood Valerie; Aslett Martin; Kerhornou Arnaud; Mooney Paul; Tivey Adrian; Berriman Matthew; Hall Neil; Rutherford Kim; Parkhill Julian; Ivens Alasdair C; Rajandream Marie-Adele; Barrell Bart
GeneDB: a resource for prokaryotic and eukaryotic organisms.
Nucleic acids research 2004;32(Database issue):D339-43.
-
2004: Bentley Stephen D; Parkhill Julian
Comparative genomic structure of prokaryotes.
Annual review of genetics 2004;38():771-92.
-
2003: Crossman Lisa; Cerdeño-Tárraga Ana; Bentley Stephen; Parkhill Julian
Pathogenomics.
Nature reviews. Microbiology 2003;1(3):176-7.
-
2003: Thomson Nicholas; Bentley Stephen; Holden Matthew; Parkhill Julian
Fitting the niche by genomic adaptation.
Nature reviews. Microbiology 2003;1(2):92-3.
-
2003: Cerdeño-Tárraga A M; Efstratiou A; Dover L G; Holden M T G; Pallen M; Bentley S D; Besra G S; Churcher C; James K D; De Zoysa A; Chillingworth T; Cronin A; Dowd L; Feltwell T; Hamlin N; Holroyd S; Jagels K; Moule S; Quail M A; Rabbinowitsch E; Rutherford K M; Thomson N R; Unwin L; Whitehead S; Barrell B G; Parkhill J
The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.
Nucleic acids research 2003;31(22):6516-23.
-
2003: Thomson Nicholas; Sebaihia Mohammed; Cerdeño-Tárraga Ana; Bentley Stephen; Crossman Lisa; Parkhill Julian
The value of comparison.
Nature reviews. Microbiology 2003;1(1):11-2.
-
2003: Wain John; Diem Nga L T; Kidgell Claire; James Keith; Fortune Sarah; Song Diep To; Ali Tahir; O Gaora Peadar; Parry Christopher; Parkhill Julian; Farrar Jeremy; White Nicholas J; Dougan Gordon
Molecular analysis of incHI1 antimicrobial resistance plasmids from Salmonella serovar Typhi strains associated with typhoid fever.
Antimicrobial agents and chemotherapy 2003;47(9):2732-9.
-
2003: Pickard Derek; Wain John; Baker Stephen; Line Alexandra; Chohan Sonia; Fookes Maria; Barron Andrew; Gaora Peadar O; Chabalgoity José A; Thanky Niren; Scholes Christoph; Thomson Nicholas; Quail Michael; Parkhill Julian; Dougan Gordon
Composition, acquisition, and distribution of the Vi exopolysaccharide-encoding Salmonella enterica pathogenicity island SPI-7.
Journal of bacteriology 2003;185(17):5055-65.
-
2003: Sebaihia Mohammed; Bentley Stephen; Crossman Lisa; Thomson Nicholas; Parkhill Julian
A bad combination.
Trends in microbiology 2003;11(7):297-9.
-
2003: Bentley Stephen D; Thomson Nicholas R; Sebaihia Mohammed; Crossman Lisa C; Parkhill Julian
The devil is in the detail.
Trends in microbiology 2003;11(6):256-8.
-
2003: Garnier Thierry; Eiglmeier Karin; Camus Jean-Christophe; Medina Nadine; Mansoor Huma; Pryor Melinda; Duthoy Stephanie; Grondin Sophie; Lacroix Celine; Monsempe Christel; Simon Sylvie; Harris Barbara; Atkin Rebecca; Doggett Jon; Mayes Rebecca; Keating Lisa; Wheeler Paul R; Parkhill Julian; Barrell Bart G; Cole Stewart T; Gordon Stephen V; Hewinson R Glyn
The complete genome sequence of Mycobacterium bovis.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(13):7877-82.
-
2003: Sebaihia Mohammed; Bentley Stephen D; Holden Matthew T G; Parkhill Julian
The good, the bad and the ugly?
Trends in microbiology 2003;11(5):204-5.
-
2003: Parkhill Julian; Berry Colin
Genomics: Relative pathogenic values.
Nature 2003;423(6935):23-5.
-
2003: Thomson Nicholas R; Cerdeño-Tárraga Ana; Crossman Lisa; Sebaihia Mohammed; Parkhill Julian
All walks of life.
Trends in microbiology 2003;11(4):159-60.
-
2003: Patrick Sheila; Parkhill Julian; McCoy Lisa J; Lennard Nicola; Larkin Michael J; Collins Martin; Sczaniecka Matylda; Blakely Garry
Multiple inverted DNA repeats of Bacteroides fragilis that control polysaccharide antigenic variation are similar to the hin region inverted repeats of Salmonella typhimurium.
Microbiology (Reading, England) 2003;149(Pt 4):915-24.
-
2003: Cerdeño-Tárraga Ana; Crossman Lisa; Parkhill Julian
A matter of fitness.
Trends in microbiology 2003;11(3):111-2.
-
2003: Bentley Stephen D; Maiwald Matthias; Murphy Lee D; Pallen Mark J; Yeats Corin A; Dover Lynn G; Norbertczak Halina T; Besra Gurdyal S; Quail Michael A; Harris David E; von Herbay Axel; Goble Arlette; Rutter Simon; Squares Robert; Squares Stephen; Barrell Bart G; Parkhill Julian; Relman David A
Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei.
Lancet 2003;361(9358):637-44.
-
2003: Thomson Nicholas R; Parkhill Julian
The building blocks of pathogenicity.
Trends in microbiology 2003;11(2):66-7.
-
2003: Holden Matthew; Bentley Stephen; Sebaihia Mohammed; Thomson Nicholas; Cerdeño-Tárraga Ana; Parkhill Julian
The magnificent seven.
Trends in microbiology 2003;11(1):12-4.
-
2003: Parkhill J; Thomson N
Evolutionary strategies of human pathogens.
Cold Spring Harbor symposia on quantitative biology 2003;68():151-8.
-
2003: Prentice Michael B; Cuccui Jon; Thomson Nick; Parkhill Julian; Deery Evelyn; Warren Martin J
Cobalamin synthesis in Yersinia enterocolitica 8081. Functional aspects of a putative metabolic island.
Advances in experimental medicine and biology 2003;529():43-6.
-
2002: Thomson Nicholas R; Sebaihia Mohammed; Parkhill Julian
Microbial genomics: spot the difference. . .
Trends in microbiology 2002;10(11):489-90.
-
2002: Canchaya Carlos; Desiere Frank; McShan W Michael; Ferretti Joseph J; Parkhill Julian; Brüssow Harald
Genome analysis of an inducible prophage and prophage remnants integrated in the Streptococcus pyogenes strain SF370.
Virology 2002;302(2):245-58.
-
2002: Berry Colin; O'Neil Susan; Ben-Dov Eitan; Jones Andrew F; Murphy Lee; Quail Michael A; Holden Mathew T G; Harris David; Zaritsky Arieh; Parkhill Julian
Complete sequence and organization of pBtoxis, the toxin-coding plasmid of Bacillus thuringiensis subsp. israelensis.
Applied and environmental microbiology 2002;68(10):5082-95.
-
2002: Thomson Nicholas; Sebaihia Mohammed; Cerdeño-Tárraga Ana; Parkhill Julian
Sibling rivalry.
Trends in microbiology 2002;10(9):396-7.
-
2002: Holden Matthew; Sebaihia Mohammed; Bentley Stephen; Parkhill Julian
Searching for clues.
Trends in microbiology 2002;10(8):354-5.
-
2002: Sebaihia Mohammed; Bentley Stephen; Thomson Nicholas; Holden Matthew; Parkhill Julian
Genome giants.
Trends in microbiology 2002;10(7):309-10.
-
2002: Sebaihia Mohammed; Bentley Stephen; Thomson Nicholas; Holden Matthew; Parkhill Julian
Tales of the unexpected.
Trends in microbiology 2002;10(6):261-2.
-
2002: Kidgell Claire; Pickard Derek; Wain John; James Keith; Diem Nga L T; Diep To Song; Levine Myron M; O'Gaora Peadar; Prentice Michael B; Parkhill Julian; Day Nicholas; Farrar Jeremy; Dougan Gordon
Characterisation and distribution of a cryptic Salmonella typhi plasmid pHCM2.
Plasmid 2002;47(3):159-71.
-
2002: Read Timothy D; Parkhill Julian
Restricting genome data won't stop bioterrorism.
Nature 2002;417(6887):379.
-
2002: Parkhill Julian
The importance of complete genome sequences.
Trends in microbiology 2002;10(5):219-20; author reply 220.
-
2002: Bentley Stephen; Holden Matthew; Thomson Nicholas; Parkhill Julian
Armed to the teeth.
Trends in microbiology 2002;10(4):163-4.
-
2002: Wain John; House Deborah; Parkhill Julian; Parry Christopher; Dougan Gordon
Unlocking the genome of the human typhoid bacillus.
The Lancet infectious diseases 2002;2(3):163-70.
-
2002: Liu Minghsun; Deora Rajendar; Doulatov Sergei R; Gingery Mari; Eiserling Frederick A; Preston Andrew; Maskell Duncan J; Simons Robert W; Cotter Peggy A; Parkhill Julian; Miller Jeff F
Reverse transcriptase-mediated tropism switching in Bordetella bacteriophage.
Science (New York, N.Y.) 2002;295(5562):2091-4.
-
2002: Holden Matthew; Sebaihia Mohammed; Cerdeño-Tárraga Ana; Parkhill Julian
Split personalities.
Trends in microbiology 2002;10(3):115.
-
2001: Eiglmeier K; Parkhill J; Honoré N; Garnier T; Tekaia F; Telenti A; Klatser P; James K D; Thomson N R; Wheeler P R; Churcher C; Harris D; Mungall K; Barrell B G; Cole S T
The decaying genome of Mycobacterium leprae.
Leprosy review 2001;72(4):387-98.
-
2001: Sebaihia M; Thomson N; Holden M; Parkhill J
Microbial genomics. Dynamic duos.
Trends in microbiology 2001;9(12):579.
-
2001: Cerdeño-Tárraga A; Thomson N; Holden M; Sebaihia M; Parkhill J
Lost and found.
Trends in microbiology 2001;9(11):526-7.
-
2001: Dorrell N; Mangan J A; Laing K G; Hinds J; Linton D; Al-Ghusein H; Barrell B G; Parkhill J; Stoker N G; Karlyshev A V; Butcher P D; Wren B W
Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity.
Genome research 2001;11(10):1706-15.
-
2001: Thomson N; Holden M; Sebaihia M; Cerdeño-Tárraga A; Parkhill J
The full monty.
Trends in microbiology 2001;9(9):411-2.
-
2001: Thomson N; Sebaihia M; Holden M; Cerdeño-Tárraga A; Parkhill J
Size matters?
Trends in microbiology 2001;9(8):359.
-
2001: Sebaihia M; Cerdeño-Tárraga A; Thomson N; Parkhill J
Of staphs, streps and other things.
Trends in microbiology 2001;9(7):309.
-
2001: Townsend S M; Kramer N E; Edwards R; Baker S; Hamlin N; Simmonds M; Stevens K; Maloy S; Parkhill J; Dougan G; Bäumler A J
Salmonella enterica serovar Typhi possesses a unique repertoire of fimbrial gene sequences.
Infection and immunity 2001;69(5):2894-901.
-
2001: Prior J L; Parkhill J; Hitchen P G; Mungall K L; Stevens K; Morris H R; Reason A J; Oyston P C; Dell A; Wren B W; Titball R W
The failure of different strains of Yersinia pestis to produce lipopolysaccharide O-antigen under different growth conditions is due to mutations in the O-antigen gene cluster.
FEMS microbiology letters 2001;197(2):229-33.
-
2001: Prentice M B; James K D; Parkhill J; Baker S G; Stevens K; Simmonds M N; Mungall K L; Churcher C; Oyston P C; Titball R W; Wren B W; Wain J; Pickard D; Hien T T; Farrar J J; Dougan G
Yersinia pestis pFra shows biovar-specific differences and recent common ancestry with a Salmonella enterica serovar Typhi plasmid.
Journal of bacteriology 2001;183(8):2586-94.
-
2001: Parkhill J
An annotator's view.
Microbiology (Reading, England) 2001;147(Pt 1):2.
-
2001: Gordon S V; Eiglmeier K; Garnier T; Brosch R; Parkhill J; Barrell B; Cole S T; Hewinson R G
Genomics of Mycobacterium bovis.
Tuberculosis (Edinburgh, Scotland) 2001;81(1-2):157-63.
-
2000: Rutherford K; Parkhill J; Crook J; Horsnell T; Rice P; Rajandream M A; Barrell B
Artemis: sequence visualization and annotation.
Bioinformatics (Oxford, England) 2000;16(10):944-5.
-
2000: Parkhill J; Achtman M; James K D; Bentley S D; Churcher C; Klee S R; Morelli G; Basham D; Brown D; Chillingworth T; Davies R M; Davis P; Devlin K; Feltwell T; Hamlin N; Holroyd S; Jagels K; Leather S; Moule S; Mungall K; Quail M A; Rajandream M A; Rutherford K M; Simmonds M; Skelton J; Whitehead S; Spratt B G; Barrell B G
Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491.
Nature 2000;404(6777):502-6.
-
2000: Parkhill J; Wren B W; Mungall K; Ketley J M; Churcher C; Basham D; Chillingworth T; Davies R M; Feltwell T; Holroyd S; Jagels K; Karlyshev A V; Moule S; Pallen M J; Penn C W; Quail M A; Rajandream M A; Rutherford K M; van Vliet A H; Whitehead S; Barrell B G
The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences.
Nature 2000;403(6770):665-8.
-
1999: Preston A; Allen A G; Cadisch J; Thomas R; Stevens K; Churcher C M; Badcock K L; Parkhill J; Barrell B; Maskell D J
Genetic basis for lipopolysaccharide O-antigen biosynthesis in bordetellae.
Infection and immunity 1999;67(8):3763-7.
-
1999: Gordon S V; Heym B; Parkhill J; Barrell B; Cole S T
New insertion sequences and a novel repeated sequence in the genome of Mycobacterium tuberculosis H37Rv.
Microbiology (Reading, England) 1999;145 ( Pt 4)():881-92.
-
1998: Parkhill J; Lawley B; Hobman J L; Brown N L
Selection and characterization of mercury-independent activation mutants of the Tn501 transcriptional regulator, MerR.
Microbiology (Reading, England) 1998;144 ( Pt 10)():2855-64.
Sign-in to see more
