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Jules Berman

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Andre A. Kajdacsy-Balla; J M Geynisman; Virgilia Macias; Suman Setty; Nahid M Nanaji; Jules J Berman; Kevin Dobbin; J Melamed; X Kong; Maarten C Bosland; Jan Orenstein; J Bayerl; Michael Becich; Rajiv Dhir; Milton W Datta
Practical aspects of planning, building, and interpreting tissue microarrays: the Cooperative Prostate Cancer Tissue Resource experience.
Ashokkumar Patel; Dilipkumar Gupta; David Seligson; Eyas M Hattab; Ulysses J Balis; Thomas M Ulbright; Isaac S Kohane; Jules J Berman; John R Gilbertson; Sarah Dry; Osvaldo Schirripa; Hong Yu; Michael Becich; Anil V Parwani
Availability and quality of paraffin blocks identified in pathology archives: a multi-institutional study by the Shared Pathology Informatics Network (SPIN).
Jules J Berman; Jorge Albores-Saavedra; David Bostwick; Ronald Delellis; John Eble; Stanley R Hamilton; Ralph Hruban; George L Mutter; David Page; Thomas E Rohan; William D Travis; Donald E Henson
Precancer: a conceptual working definition -- results of a Consensus Conference.

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All Publications

2007: Andre A. Kajdacsy-Balla; J M Geynisman; Virgilia Macias; Suman Setty; Nahid M Nanaji; Jules J Berman; Kevin Dobbin; J Melamed; X Kong; Maarten C Bosland; Jan Orenstein; J Bayerl; Michael Becich; Rajiv Dhir; Milton W Datta
Practical aspects of planning, building, and interpreting tissue microarrays: the Cooperative Prostate Cancer Tissue Resource experience.
Journal of molecular histology 2007;38(2):113-21.
2007: Ashokkumar Patel; Dilipkumar Gupta; David Seligson; Eyas M Hattab; Ulysses J Balis; Thomas M Ulbright; Isaac S Kohane; Jules J Berman; John R Gilbertson; Sarah Dry; Osvaldo Schirripa; Hong Yu; Michael Becich; Anil V Parwani
Availability and quality of paraffin blocks identified in pathology archives: a multi-institutional study by the Shared Pathology Informatics Network (SPIN).
BMC cancer 2007;7():37.
2006: Jules J Berman; Jorge Albores-Saavedra; David Bostwick; Ronald Delellis; John Eble; Stanley R Hamilton; Ralph Hruban; George L Mutter; David Page; Thomas E Rohan; William D Travis; Donald E Henson
Precancer: a conceptual working definition -- results of a Consensus Conference.
Cancer detection and prevention 2006;30(5):387-94.
2006: Ashokkumar Patel; John R Gilbertson; Anil V Parwani; Rajiv Dhir; Milton W Datta; Rajnish Gupta; Jules J Berman; Jonathan Melamed; Andre A. Kajdacsy-Balla; Jan Orenstein; Michael Becich
An informatics model for tissue banks--lessons learned from the Cooperative Prostate Cancer Tissue Resource.
BMC cancer 2006;6():120.
2005: Jules J Berman; Kishor Bhatia
Biomedical data integration: using XML to link clinical and research data sets.
Expert review of molecular diagnostics 2005;5(3):329-36.
2005: Milton W Datta; Rajiv Dhir; Kevin Dobbin; Maarten C Bosland; Jonathan Melamed; Michael Becich; Jan M Orenstein; Andre A. Kajdacsy-Balla; Ashok Patel; Virgilia Macias; Jules J Berman
Prostate cancer in patients with screening serum prostate specific antigen values less than 4.0 ng/dl: results from the cooperative prostate cancer tissue resource.
The Journal of urology 2005;173(5):1546-51.
2005: Jules J Berman
Pathology data integration with eXtensible Markup Language.
Human pathology 2005;36(2):139-45.
2005: Clement McDonald; Paul R Dexter; Gunther Schadow; Henry Chueh; Greg Abernathy; John Hook; Lonnie Blevins; J Marc Overhage; Jules J Berman
SPIN query tools for de-identified research on a humongous database.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2005;():515-9.
2005: Jules J Berman
Automatic extraction of candidate nomenclature terms using the doublet method.
BMC medical informatics and decision making 2005;5():35.
2005: Ashokkumar Patel; Andre A. Kajdacsy-Balla; Jules J Berman; Maarten C Bosland; Milton W Datta; Rajiv Dhir; John R Gilbertson; Jonathan Melamed; Jan Orenstein; Kuei-Fang Tai; Michael Becich
The development of common data elements for a multi-institute prostate cancer tissue bank: the Cooperative Prostate Cancer Tissue Resource (CPCTR) experience.
BMC cancer 2005;5():108.
2005: Jules J Berman
Nomenclature-based data retrieval without prior annotation: facilitating biomedical data integration with fast doublet matching.
In silico biology 2005;5(3):313-22.
2004: Jules J Berman
Tumor taxonomy for the developmental lineage classification of neoplasms.
BMC cancer 2004;4():88.
2004: Milton W Datta; Jules J Berman; Rajiv Dhir
Prostate cancer with low PSA levels.
The New England journal of medicine 2004;351(17):1802-3.
2004: Jules J Berman
Doublet method for very fast autocoding.
BMC medical informatics and decision making 2004;4():16.
2004: Jeffrey D Seidman; Robert A Soslow; Russell Vang; Jules J Berman; Mark H Stoler; Mark E Sherman; Esther Oliva; Andre A. Kajdacsy-Balla; berman david; Larry J Copeland
Borderline ovarian tumors: diverse contemporary viewpoints on terminology and diagnostic criteria with illustrative images.
Human pathology 2004;35(8):918-33.
2004: Jules J Berman
Borderline Ovarian Tumor Workshop, Bethesda, Maryland, August 27-28, 2003.
Human pathology 2004;35(8):907-9.
2004: Jonathan Melamed; Milton W Datta; Michael Becich; Jan M Orenstein; Rajiv Dhir; Sylvia Silver; Marie Fidélia-Lambert; André Kadjacsy-Balla; Virgilia Macias; Ashokkumar Patel; Paul D Walden; Maarten C Bosland; Jules J Berman
The cooperative prostate cancer tissue resource: a specimen and data resource for cancer researchers.
Clinical cancer research : an official journal of the American Association for Cancer Research 2004;10(14):4614-21.
2004: Jules J Berman
Resources for comparing the speed and performance of medical autocoders.
BMC medical informatics and decision making 2004;4():8.
2004: David L Booker; Jules J Berman
Dangerous abbreviations.
Human pathology 2004;35(5):529-31.
2004: Jules J Berman
Tumor classification: molecular analysis meets Aristotle.
BMC cancer 2004;4():10.
2004: Jules J Berman
Zero-check: a zero-knowledge protocol for reconciling patient identities across institutions.
Archives of pathology & laboratory medicine 2004;128(3):344-6.
2004: Jules J Berman
Pathology abbreviated: a long review of short terms.
Archives of pathology & laboratory medicine 2004;128(3):347-52.
2004: Jules J Berman; Milton Datta; Andre A. Kajdacsy-Balla; Jonathan Melamed; Jan Orenstein; Kevin Dobbin; Ashok Patel; Rajiv Dhir; Michael Becich
The tissue microarray data exchange specification: implementation by the Cooperative Prostate Cancer Tissue Resource.
BMC bioinformatics 2004;5():19.
2004: Jules J Berman
Racing to share pathology data.
American journal of clinical pathology 2004;121(2):169-71.
2004: Kevin J Mitchell; Michael Becich; Jules J Berman; Wendy W Chapman; John R Gilbertson; Dilip Gupta; James H Harrison; Elizabeth Legowski; Rebecca S Crowley
Implementation and evaluation of a negation tagger in a pipeline-based system for information extract from pathology reports.
Studies in health technology and informatics 2004;107(Pt 1):663-7.
2003: Jules J Berman; Donald E Henson
The precancers: waiting for a classification.
Human pathology 2003;34(9):833-4.
2003: Jules J Berman; Donald E Henson
Classifying the precancers: a metadata approach.
BMC medical informatics and decision making 2003;3():8.
2003: Jules J Berman
A tool for sharing annotated research data: the "Category 0" UMLS (Unified Medical Language System) vocabularies.
BMC medical informatics and decision making 2003;3():6.
2003: Jules J Berman
Concept-match medical data scrubbing. How pathology text can be used in research.
Archives of pathology & laboratory medicine 2003;127(6):680-6.
2003: Jules J Berman; Mary E Edgerton; Bruce Friedman
The tissue microarray data exchange specification: a community-based, open source tool for sharing tissue microarray data.
BMC medical informatics and decision making 2003;3():5.
2002: Jules J Berman
Threshold protocol for the exchange of confidential medical data.
BMC medical research methodology 2002;2():12.
2002: Jules J Berman
Confidentiality issues for medical data miners.
Artificial intelligence in medicine 2002;26(1-2):25-36.
2002: Scott C Kogan; Jerrold M Ward; Miriam R Anver; Jules J Berman; CORY BRAYTON; Robert Cardiff; John S Carter; Sherri de Coronado; James R Downing; Torgny N Fredrickson; Diana C Haines; Alan W Harris; Nancy Lee Harris; Hiroshi Hiai; Elaine S Jaffe; Ian C M MacLennan; Pier Paolo Pandolfi; Paul K Pattengale; Archibald S Perkins; R Mark Simpson; Mark S Tuttle; Joanne F Wong; Herbert C Morse
Bethesda proposals for classification of nonlymphoid hematopoietic neoplasms in mice.
Blood 2002;100(1):238-45.
2002: Christopher D M Fletcher; Jules J Berman; Christopher L Corless; Fred Gorstein; Jerzy Lasota; B Jack Longley; Markku Miettinen; timothy o'leary; Helen E Remotti; Brian P Rubin; Barry Shmookler; Leslie H Sobin; Sharon W Weiss
Diagnosis of gastrointestinal stromal tumors: A consensus approach.
Human pathology 2002;33(5):459-65.
2002: timothy o'leary; Jules J Berman
Gastrointestinal stromal tumors: answers and questions.
Human pathology 2002;33(5):456-8.
2002: Christopher D M Fletcher; Jules J Berman; Christopher L Corless; Fred Gorstein; Jerzy Lasota; B Jack Longley; Markku Miettinen; timothy o'leary; Helen E Remotti; Brian P Rubin; Barry Shmookler; Leslie H Sobin; Sharon W Weiss
Diagnosis of gastrointestinal stromal tumors: a consensus approach.
International journal of surgical pathology 2002;10(2):81-9.