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John Peters

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David W Mulder; Seth M Noone; John W Peters; Michael W Ratzloff; Eric M Shepard; Joan B Broderick; Amanda S Byer; Paul W King
EPR and FTIR Analysis of the Mechanism of H2 Activation by [FeFe]-Hydrogenase HydA1 from Chlamydomonas reinhardtii.
Neelambari Joshi; Joan B Broderick; Amanda S Byer; Eric M Shepard; Kevin D Swanson; John W Peters
Iron-sulfur cluster coordination in the [FeFe]-hydrogenase H cluster biosynthetic factor HydF.
T L Hamilton; Eric S Boyd; Donald A Bryant; K Vogl; John W Peters
Environmental constraints defining the distribution, composition, and evolution of chlorophototrophs in thermal features of Yellowstone National Park.

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All Publications

2013: David W Mulder; Seth M Noone; John W Peters; Michael W Ratzloff; Eric M Shepard; Joan B Broderick; Amanda S Byer; Paul W King
EPR and FTIR Analysis of the Mechanism of H2 Activation by [FeFe]-Hydrogenase HydA1 from Chlamydomonas reinhardtii.
Journal of the American Chemical Society 2013;135(18):6921-9.
2012: Neelambari Joshi; Joan B Broderick; Amanda S Byer; Eric M Shepard; Kevin D Swanson; John W Peters
Iron-sulfur cluster coordination in the [FeFe]-hydrogenase H cluster biosynthetic factor HydF.
FEBS letters 2012;586(22):3939-43.
2012: T L Hamilton; Eric S Boyd; Donald A Bryant; K Vogl; John W Peters
Environmental constraints defining the distribution, composition, and evolution of chlorophototrophs in thermal features of Yellowstone National Park.
Geobiology 2012;10(3):236-49.
2012: Shawn E McGlynn; Eric S Boyd; John W Peters; Victoria J Orphan
Classifying the metal dependence of uncharacterized nitrogenases.
Frontiers in microbiology 2012;3():419.
2012: Eric S Boyd; Kristopher M Fecteau; Jeff R Havig; Everett L Shock; John W Peters
Modeling the habitat range of phototrophs in yellowstone national park: toward the development of a comprehensive fitness landscape.
Frontiers in microbiology 2012;3():221.
2012: John W Peters; Joan B Broderick
Emerging paradigms for complex iron-sulfur cofactor assembly and insertion.
Annual review of biochemistry 2012;81():429-50.
2012: Oleg A Zadvornyy; Nikolay A Zorin; Trevor Douglas; Timothy E Elgren; Robin Gerlach; Janice E Lucon; John W Peters
Photo-induced H2 production by [NiFe]-hydrogenase from T. roseopersicina covalently linked to a Ru(II) photosensitizer.
Journal of inorganic biochemistry 2012;106(1):151-5.
2011: Jonathan E Meuser; U M Narayana Murthy; John W Peters; Gennady M Ananyev; Eric S Boyd; G Charles Dismukes; Maria L Ghirardi; Devin Karns; Randor Radakovits; Matthew C Posewitz
Evolutionary significance of an algal gene encoding an [FeFe]-hydrogenase with F-domain homology and hydrogenase activity in Chlorella variabilis NC64A.
Planta 2011;234(4):829-43.
2011: Melissa A Kofoed; Arti S Pandey; John W Peters; David A Wampler; Scott A Ensign
Roles of the redox-active disulfide and histidine residues forming a catalytic dyad in reactions catalyzed by 2-ketopropyl coenzyme M oxidoreductase/carboxylase.
Journal of bacteriology 2011;193(18):4904-13.
2011: David W Mulder; Matthew C Posewitz; Eric M Shepard; Joan B Broderick; Neelambari Joshi; Paul W King; Jonathan E Meuser; John W Peters
Insights into [FeFe]-hydrogenase structure, mechanism, and maturation.
Structure (London, England : 1993) 2011;19(8):1038-52.
2011: Eric S Boyd; A D Anbar; S Miller; T L Hamilton; M Lavin; John W Peters
A late methanogen origin for molybdenum-dependent nitrogenase.
Geobiology 2011;9(3):221-32.
2011: Trinity L Hamilton; Eric S Boyd; John W Peters
Environmental constraints underpin the distribution and phylogenetic diversity of nifH in the Yellowstone geothermal complex.
Microbial ecology 2011;61(4):860-70.
2011: Arti S Pandey; David W Mulder; Scott A Ensign; John W Peters
Structural basis for carbon dioxide binding by 2-ketopropyl coenzyme M oxidoreductase/carboxylase.
FEBS letters 2011;585(3):459-64.
2011: Eric S Boyd; Trinity L Hamilton; John W Peters
An alternative path for the evolution of biological nitrogen fixation.
Frontiers in microbiology 2011;2():205.
2011: David W Mulder; John W Peters
Small angle x-ray scattering spectroscopy.
Methods in molecular biology (Clifton, N.J.) 2011;766():177-89.
2010: Eric S Boyd; Trinity L Hamilton; John R Spear; Matthew Lavin; John W Peters
[FeFe]-hydrogenase in Yellowstone National Park: evidence for dispersal limitation and phylogenetic niche conservatism.
The ISME journal 2010;4(12):1485-95.
2010: Eric M Shepard; Shawn E McGlynn; Alexandra L Bueling; Celestine S Grady-Smith; Simon J George; Mark A Winslow; Stephen P Cramer; John W Peters; Joan B Broderick
Synthesis of the 2Fe subcluster of the [FeFe]-hydrogenase H cluster on the HydF scaffold.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(23):10448-53.
2010: Dariusz A Sliwa; Arathi M Krishnakumar; John W Peters; Scott A Ensign
Molecular basis for enantioselectivity in the (R)- and (S)-hydroxypropylthioethanesulfonate dehydrogenases, a unique pair of stereoselective short-chain dehydrogenases/reductases involved in aliphatic epoxide carboxylation.
Biochemistry 2010;49(16):3487-98.
2010: Ranjana Sarma; Brett M Barney; Stephen Keable; Dennis R Dean; Lance C Seefeldt; John W Peters
Insights into substrate binding at FeMo-cofactor in nitrogenase from the structure of an alpha-70(Ile) MoFe protein variant.
Journal of inorganic biochemistry 2010;104(4):385-9.
2010: Oleg Zadvornyy; Mark Allen; Susan K Brumfield; Zack Varpness; Eric S Boyd; Nikolay A Zorin; Larisa Serebriakova; Trevor Douglas; John W Peters
Hydrogen enhances nickel tolerance in the purple sulfur bacterium Thiocapsa roseopersicina.
Environmental science & technology 2010;44(2):834-40.
2010: Shawn E McGlynn; Eric S Boyd; Eric M Shepard; Rachel K Lange; Robin Gerlach; Joan B Broderick; John W Peters
Identification and characterization of a novel member of the radical AdoMet enzyme superfamily and implications for the biosynthesis of the Hmd hydrogenase active site cofactor.
Journal of bacteriology 2010;192(2):595-8.
2009: David W Mulder; Danilo O Ortillo; David J Gardenghi; Anatoli V Naumov; Shane S Ruebush; Robert K Szilagyi; Boi Hanh Huynh; Joan B Broderick; John W Peters
Activation of HydA(DeltaEFG) requires a preformed [4Fe-4S] cluster.
Biochemistry 2009;48(26):6240-8.
2009: Eric S Boyd; John R Spear; John W Peters
[FeFe] hydrogenase genetic diversity provides insight into molecular adaptation in a saline microbial mat community.
Applied and environmental microbiology 2009;75(13):4620-3.
2009: Shawn E McGlynn; David W Mulder; Eric M Shepard; Joan B Broderick; John W Peters
Hydrogenase cluster biosynthesis: organometallic chemistry nature's way.
Dalton transactions (Cambridge, England : 2003) 2009;(22):4274-85.
2009: Laura L Beer; Eric S Boyd; John W Peters; Matthew C Posewitz
Engineering algae for biohydrogen and biofuel production.
Current opinion in biotechnology 2009;20(3):264-71.
2008: Ranjana Sarma; Brett M Barney; Trinity L Hamilton; Alma Jones; Lance C Seefeldt; John W Peters
Crystal structure of the L protein of Rhodobacter sphaeroides light-independent protochlorophyllide reductase with MgADP bound: a homologue of the nitrogenase Fe protein.
Biochemistry 2008;47(49):13004-15.
2008: Arathi M Krishnakumar; Darius Sliwa; James A Endrizzi; Eric S Boyd; Scott A Ensign; John W Peters
Getting a handle on the role of coenzyme M in alkene metabolism.
Microbiology and molecular biology reviews : MMBR 2008;72(3):445-56.
2008: Shawn E McGlynn; Eric M Shepard; Mark A Winslow; Anatoli V Naumov; Kaitlin S Duschene; Matthew C Posewitz; William E Broderick; Joan B Broderick; John W Peters
HydF as a scaffold protein in [FeFe] hydrogenase H-cluster biosynthesis.
FEBS letters 2008;582(15):2183-7.
2008: Arti S Pandey; Travis V Harris; Logan J Giles; John W Peters; Robert K Szilagyi
Dithiomethylether as a ligand in the hydrogenase h-cluster.
Journal of the American Chemical Society 2008;130(13):4533-40.
2008: Anne-Soisig Steunou; Sheila I Jensen; Eric Brecht; Eric D Becraft; Mary M Bateson; Oliver Kilian; Devaki Bhaya; David M Ward; John W Peters; Arthur R Grossman; Michael Kühl
Regulation of nif gene expression and the energetics of N2 fixation over the diel cycle in a hot spring microbial mat.
The ISME journal 2008;2(4):364-78.
2007: Ranjana Sarma; David W Mulder; Eric Brecht; Robert K Szilagyi; Lance C Seefeldt; Hiro Tsuruta; John W Peters
Probing the MgATP-bound conformation of the nitrogenase Fe protein by solution small-angle X-ray scattering.
Biochemistry 2007;46(49):14058-66.
2007: Shawn E McGlynn; Shane S Ruebush; Anatoli Naumov; Lauren E Nagy; Alexandra Dubini; Paul W King; Joan B Broderick; Matthew C Posewitz; John W Peters
In vitro activation of [FeFe] hydrogenase: new insights into hydrogenase maturation.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2007;12(4):443-7.
2006: David E Schwab; Cédric Tard; Eric Brecht; John W Peters; Christopher Pickett; Robert K Szilagyi
On the electronic structure of the hydrogenase H-cluster.
Chemical communications (Cambridge, England) 2006;(35):3696-8.
2006: Arathi M Krishnakumar; Bogi Nocek; Daniel D Clark; Scott A Ensign; John W Peters
Structural basis for stereoselectivity in the (R)- and (S)-hydroxypropylthioethanesulfonate dehydrogenases.
Biochemistry 2006;45(29):8831-40.
2006: Sanchayita Sen; Arathi Krishnakumar; Jammi McClead; Michael K Johnson; Lance C Seefeldt; Robert K Szilagyi; John W Peters
Insights into the role of nucleotide-dependent conformational change in nitrogenase catalysis: Structural characterization of the nitrogenase Fe protein Leu127 deletion variant with bound MgATP.
Journal of inorganic biochemistry 2006;100(5-6):1041-52.
2006: John W Peters; Robert K Szilagyi
Exploring new frontiers of nitrogenase structure and mechanism.
Current opinion in chemical biology 2006;10(2):101-8.
2006: Anne-Soisig Steunou; Devaki Bhaya; Mary M Bateson; Melanie C Melendrez; David M Ward; Eric Brecht; John W Peters; Michael Kühl; Arthur R Grossman
In situ analysis of nitrogen fixation and metabolic switching in unicellular thermophilic cyanobacteria inhabiting hot spring microbial mats.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(7):2398-403.
2006: Sanchayita Sen; John W Peters
The thermal adaptation of the nitrogenase Fe protein from thermophilic Methanobacter thermoautotrophicus.
Proteins 2006;62(2):450-60.
2006: John W Peters; Robert K Szilagyi; Anatoli Naumov; Trevor Douglas
A radical solution for the biosynthesis of the H-cluster of hydrogenase.
FEBS letters 2006;580(2):363-7.
2006: Arti S Pandey; Bogi Nocek; Daniel D Clark; Scott A Ensign; John W Peters
Mechanistic implications of the structure of the mixed-disulfide intermediate of the disulfide oxidoreductase, 2-ketopropyl-coenzyme M oxidoreductase/carboxylase.
Biochemistry 2006;45(1):113-20.
2005: Z Varpness; John W Peters; Mark Young; Trevor Douglas
Biomimetic synthesis of a H2 catalyst using a protein cage architecture.
Nano letters 2005;5(11):2306-9.
2005: Timothy E Elgren; Oleg Zadvornyy; Eric Brecht; Trevor Douglas; Nikolay A Zorin; Michael Maroney; John W Peters
Immobilization of active hydrogenases by encapsulation in polymeric porous gels.
Nano letters 2005;5(10):2085-7.
2005: Alicja J Copik; Bogi Nocek; Sabina I Swierczek; Shane Ruebush; Se Bok Jang; Lu Meng; Ventris M D'souza; John W Peters; Brian Bennett; Richard C Holz
EPR and X-ray crystallographic characterization of the product-bound form of the MnII-loaded methionyl aminopeptidase from Pyrococcus furiosus.
Biochemistry 2005;44(1):121-9.
2004: Se Bok Jang; Mi Suk Jeong; Lance C Seefeldt; John W Peters
Structural and biochemical implications of single amino acid substitutions in the nucleotide-dependent switch regions of the nitrogenase Fe protein from Azotobacter vinelandii.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2004;9(8):1028-33.
2004: Sanchayita Sen; Robert Y Igarashi; Archer Smith; Michael K Johnson; Lance C Seefeldt; John W Peters
A conformational mimic of the MgATP-bound "on state" of the nitrogenase iron protein.
Biochemistry 2004;43(7):1787-97.
2004: Bogi Nocek; Jeffrey Boyd; Scott A Ensign; John W Peters
Crystallization and preliminary X-ray analysis of an acetone carboxylase from Xanthobacter autotrophicus strain Py2.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 2):385-7.
2003: Krzysztof Swierczek; Arti S Pandey; John W Peters; Alvan C Hengge
A comparison of phosphonothioic acids with phosphonic acids as phosphatase inhibitors.
Journal of medicinal chemistry 2003;46(17):3703-8.
2002: Bogi Nocek; Se Bok Jang; Mi Suk Jeong; Daniel D Clark; Scott A Ensign; John W Peters
Structural basis for CO2 fixation by a novel member of the disulfide oxidoreductase family of enzymes, 2-ketopropyl-coenzyme M oxidoreductase/carboxylase.
Biochemistry 2002;41(43):12907-13.
2002: John W Peters
Enzymology. A trio of transition metals in anaerobic CO2 fixation.
Science (New York, N.Y.) 2002;298(5593):552-3.
2002: Bogi Nocek; Daniel D Clark; Scott A Ensign; John W Peters
Crystallization and preliminary X-ray analysis of an R-2-hydroxypropyl-coenzyme M dehydrogenase.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 9):1470-3.
2002: Zhujun Chen; Brian J Lemon; Shan Huang; Derrick J Swartz; John W Peters; Kimberly A Bagley
Infrared studies of the CO-inhibited form of the Fe-only hydrogenase from Clostridium pasteurianum I: examination of its light sensitivity at cryogenic temperatures.
Biochemistry 2002;41(6):2036-43.
2001: Se Bok Jang; Mi Suk Jeong; Daniel D Clark; Scott A Ensign; John W Peters
Crystallization and preliminary X-ray analysis of a NADPH 2-ketopropyl-coenzyme M oxidoreductase/carboxylase.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 3):445-7.
2001: Morten Sørlie; jason christiansen; Brian J Lemon; John W Peters; Dennis R Dean; Brian J Hales
Mechanistic features and structure of the nitrogenase alpha-Gln195 MoFe protein.
Biochemistry 2001;40(6):1540-9.
2001: H Chiu; John W Peters; William N Lanzilotta; MJ Ryle; Lance C Seefeldt; James B Howard; Douglas C Rees
MgATP-Bound and nucleotide-free structures of a nitrogenase protein complex between the Leu 127 Delta-Fe-protein and the MoFe-protein.
Biochemistry 2001;40(3):641-50.
2000: Se Bok Jang; Lance C Seefeldt; John W Peters
Insights into nucleotide signal transduction in nitrogenase: structure of an iron protein with MgADP bound.
Biochemistry 2000;39(48):14745-52.
2000: Brian Bennett; Brian J Lemon; John W Peters
Reversible carbon monoxide binding and inhibition at the active site of the Fe-only hydrogenase.
Biochemistry 2000;39(25):7455-60.
2000: Yvain Nicolet; Brian J Lemon; Juan C Fontecilla-Camps; John W Peters
A novel FeS cluster in Fe-only hydrogenases.
Trends in biochemical sciences 2000;25(3):138-43.
2000: Se Bok Jang; Lance C Seefeldt; John W Peters
Modulating the midpoint potential of the [4Fe-4S] cluster of the nitrogenase Fe protein.
Biochemistry 2000;39(4):641-8.
1999: John W Peters
Structure and mechanism of iron-only hydrogenases.
Current opinion in structural biology 1999;9(6):670-6.
1999: Brian J Lemon; John W Peters
Binding of exogenously added carbon monoxide at the active site of the iron-only hydrogenase (CpI) from Clostridium pasteurianum.
Biochemistry 1999;38(40):12969-73.
1998: John W Peters; William N Lanzilotta; Brian J Lemon; Lance C Seefeldt
X-ray crystal structure of the Fe-only hydrogenase (CpI) from Clostridium pasteurianum to 1.8 angstrom resolution.
Science (New York, N.Y.) 1998;282(5395):1853-8.
1997: John W Peters; MH Stowell; S Michael Soltis; M G Finnegan; Michael K Johnson; Douglas C Rees
Redox-dependent structural changes in the nitrogenase P-cluster.
Biochemistry 1997;36(6):1181-7.