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Brian Pogue

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Adam K Glaser; Stephen C Kanick; Pedro Arce; Rongxiao Zhang; Brian W Pogue
A GAMOS plug-in for GEANT4 based Monte Carlo simulation of radiation-induced light transport in biological media.
Rongxiao Zhang; Sergei A Vinogradov; Scott C Davis; Jennifer-Lynn H Demers; Tatiana V Esipova; David J Gladstone; Adam K Glaser; Brian W Pogue
Oxygen tomography by Čerenkov-excited phosphorescence during external beam irradiation.
Ashley M Laughney; Keith D Paulsen; Brian W Pogue; Tyler B Rice; Bruce J Tromberg; Richard J Barth; David J Cuccia; Venkataramanan Krishnaswamy; Wendy A Wells
System analysis of spatial frequency domain imaging for quantitative mapping of surgically resected breast tissues.

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All Publications

2013: Adam K Glaser; Stephen C Kanick; Pedro Arce; Rongxiao Zhang; Brian W Pogue
A GAMOS plug-in for GEANT4 based Monte Carlo simulation of radiation-induced light transport in biological media.
Biomedical optics express 2013;4(5):741-59.
2013: Rongxiao Zhang; Sergei A Vinogradov; Scott C Davis; Jennifer-Lynn H Demers; Tatiana V Esipova; David J Gladstone; Adam K Glaser; Brian W Pogue
Oxygen tomography by Čerenkov-excited phosphorescence during external beam irradiation.
Journal of biomedical optics 2013;18(5):50503.
2013: Ashley M Laughney; Keith D Paulsen; Brian W Pogue; Tyler B Rice; Bruce J Tromberg; Richard J Barth; David J Cuccia; Venkataramanan Krishnaswamy; Wendy A Wells
System analysis of spatial frequency domain imaging for quantitative mapping of surgically resected breast tissues.
Journal of biomedical optics 2013;18(3):036012.
2013: Adam K Glaser; Brian W Pogue; William H A Voigt; Rongxiao Zhang; Scott C Davis; David J Gladstone
Projection imaging of photon beams using Čerenkov-excited fluorescence.
Physics in medicine and biology 2013;58(3):601-19.
2013: Sason Torosean; Kimberley S Samkoe; Johan Axelsson; Marvin M Doyley; Brendan Flynn; Jason Gunn; Tayyaba Hasan; Brian W Pogue
Nanoparticle uptake in tumors is mediated by the interplay of vascular and collagen density with interstitial pressure.
Nanomedicine : nanotechnology, biology, and medicine 2013;9(2):151-8.
2013: Kristian Sexton; Kenneth Tichauer; Jason Gunn; P Jack Hoopes; Kimberley S Samkoe; Brian W Pogue
Fluorescent affibody Peptide penetration in glioma margin is superior to full antibody.
PloS one 2013;8(4):e60390.
2013: Adam K Glaser; David M McClatchy; Brian W Pogue; Rongxiao Zhang; Scott C Davis; David J Gladstone
Projection imaging of photon beams by the Čerenkov effect.
Medical physics 2013;40(1):012101.
2013: Kenneth M Tichauer; Kimberley S Samkoe; Scott C Davis; Fadi El-Ghussein; Jason R Gunn; Robert W Holt; Frederic Leblond; Brian W Pogue
Dual-tracer background subtraction approach for fluorescent molecular tomography.
Journal of biomedical optics 2013;18(1):16003.
2012: K M Tichauer; Kimberley S Samkoe; Tayyaba Hasan; W S Klubben; Brian W Pogue
Advantages of a dual-tracer model over reference tissue models for binding potential measurement in tumors.
Physics in medicine and biology 2012;57(20):6647-59.
2012: Kenneth M Tichauer; Harold H Yang; Kimberley S Samkoe; Kristian J Sexton; Jason R Gunn; Tayyaba Hasan; Shannon K Hextrum; W Spencer Klubben; Brian W Pogue
In vivo quantification of tumor receptor binding potential with dual-reporter molecular imaging.
Molecular imaging and biology : MIB : the official publication of the Academy of Molecular Imaging 2012;14(5):584-92.
2012: Jennifer-Lynn H Demers; Scott C Davis; Brian W Pogue; Michael D Morris
Multichannel diffuse optical Raman tomography for bone characterization in vivo: a phantom study.
Biomedical optics express 2012;3(9):2299-305.
2012: Kelly Michaelsen; Ken Brooks; Ken Defreitas; Venkataramanan Krishnaswamy; Brian W Pogue; Steven P Poplack; Ian Shaw; Keith D Paulsen
Characterization of materials for optimal near-infrared and x-ray imaging of the breast.
Biomedical optics express 2012;3(9):2078-86.
2012: Kimberley S Samkoe; Kristian Sexton; Kenneth M Tichauer; Scott C Davis; Tayyaba Hasan; Shannon K Hextrum; P Jack Hoopes; Julia A O'Hara; Omar Pardesi; Brian W Pogue
High vascular delivery of EGF, but low receptor binding rate is observed in AsPC-1 tumors as compared to normal pancreas.
Molecular imaging and biology : MIB : the official publication of the Academy of Molecular Imaging 2012;14(4):472-9.
2012: Kelly Michaelsen; Brian W Pogue; Steven P Poplack; Venkat Krishnaswamy; Keith D Paulsen
Near-infrared spectral tomography integrated with digital breast tomosynthesis: effects of tissue scattering on optical data acquisition design.
Medical physics 2012;39(7):4579-87.
2012: Kenneth M Tichauer; Jason R Gunn; Tayyaba Hasan; Kimberley S Samkoe; Kristian J Sexton; Brian W Pogue
Improved tumor contrast achieved by single time point dual-reporter fluorescence imaging.
Journal of biomedical optics 2012;17(6):066001.
2012: Kenneth M Tichauer; Kimberley S Samkoe; Hamid Dehghani; Fadi El-Ghussein; Jason R Gunn; Robert W Holt; Michael Jermyn; Frederic Leblond; Brian W Pogue
Computed tomography-guided time-domain diffuse fluorescence tomography in small animals for localization of cancer biomarkers.
Journal of visualized experiments : JoVE 2012;(65):e4050.
2011: Brian W Pogue; Scott C Davis; Hamid Dehghani; Frederic Leblond; Michael A Mastanduno; Keith D Paulsen
Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value.
Philosophical transactions. Series A, Mathematical, physical, and engineering sciences 2011;369(1955):4531-57.
2011: Kimberley S Samkoe; Harold H Yang; Summer L Gibbs-Strauss; P Jack Hoopes; Risto A Kauppinen; S Khan Hekmatyar; Julia A O'Hara; Brian W Pogue
Protoporphyrin IX fluorescence contrast in invasive glioblastomas is linearly correlated with Gd enhanced magnetic resonance image contrast but has higher diagnostic accuracy.
Journal of biomedical optics 2011;16(9):096008.
2011: Johan Axelsson; Scott C Davis; David J Gladstone; Brian W Pogue
Cerenkov emission induced by external beam radiation stimulates molecular fluorescence.
Medical physics 2011;38(7):4127-32.
2011: Michael A Mastanduno; Roberta DiFlorio-Alexander; Shudong Jiang; Brian W Pogue; Keith D Paulsen
Remote positioning optical breast magnetic resonance coil for slice-selection during image-guided near-infrared spectroscopy of breast cancer.
Journal of biomedical optics 2011;16(6):066001.
2011: Anqi Zhang; Guan Xu; Chathuri Daluwatte; Gang Yao; Charles F Bunting; Brian W Pogue; Daqing Piao
Photon diffusion in a homogeneous medium bounded externally or internally by an infinitely long circular cylindrical applicator. II. Quantitative examinations of the steady-state theory.
Journal of the Optical Society of America. A, Optics, image science, and vision 2011;28(2):66-75.
2011: Colin M Carpenter; Brian W Pogue; Shudong Jiang; Jia Wang; Brian A Hargreaves; Rebecca Rakow-Penner; Bruce L Daniel; Keith D Paulsen
MR water quantitative priors improves the accuracy of optical breast imaging.
IEEE transactions on medical imaging 2011;30(1):159-68.
2010: Imran Rizvi; Jonathan P Celli; Conor L Evans; Adnan O Abu-Yousif; Alona Muzikansky; Brian W Pogue; Dianne Finkelstein; Tayyaba Hasan
Synergistic enhancement of carboplatin efficacy with photodynamic therapy in a three-dimensional model for micrometastatic ovarian cancer.
Cancer research 2010;70(22):9319-28.
2010: Ashley M Laughney; Venkataramanan Krishnaswamy; Pilar Beatriz Garcia-Allende; Olga M Conde; Wendy A Wells; Keith D Paulsen; Brian W Pogue
Automated classification of breast pathology using local measures of broadband reflectance.
Journal of biomedical optics 2010;15(6):066019.
2010: Subhadra Srinivasan; Colin M Carpenter; Hamid R Ghadyani; Senate J Taka; Peter A Kaufman; Roberta M Diflorio-Alexander; Wendy A Wells; Brian W Pogue; Keith D Paulsen
Image guided near-infrared spectroscopy of breast tissue in vivo using boundary element method.
Journal of biomedical optics 2010;15(6):061703.
2010: Subhadra Srinivasan; Brian W Pogue; Hamid R Ghadyani; Keith D Paulsen
A coupled finite element-boundary element method for modeling Diffusion equation in 3D multi-modality optical imaging.
Biomedical optics express 2010;1(2):398-413.
2010: Christine B Warren; Sara Lohser; Lauren C Wene; Brian W Pogue; Philip L Bailin; Edward V Maytin
Noninvasive fluorescence monitoring of protoporphyrin IX production and clinical outcomes in actinic keratoses following short-contact application of 5-aminolevulinate.
Journal of biomedical optics 2010;15(5):051607.
2010: Scott C Davis; Kimberley S Samkoe; Julia A O'Hara; Summer L Gibbs-Strauss; Keith D Paulsen; Brian W Pogue
Comparing implementations of magnetic-resonance-guided fluorescence molecular tomography for diagnostic classification of brain tumors.
Journal of biomedical optics 2010;15(5):051602.
2010: Brian W Pogue; Frederic Leblond; Venkataramanan Krishnaswamy; Keith D Paulsen
Radiologic and near-infrared/optical spectroscopic imaging: where is the synergy?
AJR. American journal of roentgenology 2010;195(2):321-32.
2010: Jia Wang; Shudong Jiang; Zhongze Li; Roberta M diFlorio-Alexander; Richard J Barth; Peter A Kaufman; Brian W Pogue; Keith D Paulsen
In vivo quantitative imaging of normal and cancerous breast tissue using broadband diffuse optical tomography.
Medical physics 2010;37(7):3715-24.
2010: Jonathan P Celli; Bryan Q Spring; Imran Rizvi; Conor L Evans; Kimberley S Samkoe; Sarika Verma; Brian W Pogue; Tayyaba Hasan
Imaging and photodynamic therapy: mechanisms, monitoring, and optimization.
Chemical reviews 2010;110(5):2795-838.
2010: Colin M Carpenter; Rebecca Rakow-Penner; Shudong Jiang; Bruce L Daniel; Brian W Pogue; Gary H Glover; Keith D Paulsen
Inspired gas-induced vascular change in tumors with magnetic-resonance-guided near-infrared imaging: human breast pilot study.
Journal of biomedical optics 2010;15(3):036026.
2010: Brian W Pogue; Kimberley S Samkoe; Shannon Hextrum; Julia A O'Hara; Michael Jermyn; Subhadra Srinivasan; Tayyaba Hasan
Imaging targeted-agent binding in vivo with two probes.
Journal of biomedical optics 2010;15(3):030513.
2010: C M Carpenter; R Rakow-Penner; Shudong Jiang; Brian W Pogue; G H Glover; Keith D Paulsen
Monitoring of hemodynamic changes induced in the healthy breast through inspired gas stimuli with MR-guided diffuse optical imaging.
Medical physics 2010;37(4):1638-46.
2010: Josiah D Gruber; Akshat Paliwal; Venkataramanan Krishnaswamy; Hamid Ghadyani; Michael Jermyn; Julia A O'Hara; Scott C Davis; Joanna S Kerley-Hamilton; Nicholas W Shworak; Edward V Maytin; Tayyaba Hasan; Brian W Pogue
System development for high frequency ultrasound-guided fluorescence quantification of skin layers.
Journal of biomedical optics 2010;15(2):026028.
2010: Anqi Zhang; Daqing Piao; Charles F Bunting; Brian W Pogue
Photon diffusion in a homogeneous medium bounded externally or internally by an infinitely long circular cylindrical applicator. I. Steady-state theory.
Journal of the Optical Society of America. A, Optics, image science, and vision 2010;27(3):648-62.
2010: Scott C Davis; Kimberley S Samkoe; Julia A O'Hara; Summer L Gibbs-Strauss; Hannah L Payne; P Jack Hoopes; Keith D Paulsen; Brian W Pogue
MRI-coupled fluorescence tomography quantifies EGFR activity in brain tumors.
Academic radiology 2010;17(3):271-6.
2010: Frederic Leblond; Scott C Davis; Pablo A Valdés; Brian W Pogue
Pre-clinical whole-body fluorescence imaging: Review of instruments, methods and applications.
Journal of photochemistry and photobiology. B, Biology 2010;98(1):77-94.
2010: Brian W Pogue; Kimberley S Samkoe; Summer L Gibbs-Strauss; Scott C Davis
Fluorescent molecular imaging and dosimetry tools in photodynamic therapy.
Methods in molecular biology (Clifton, N.J.) 2010;635():207-22.
2010: Kimberley S Samkoe; Alina Chen; Imran Rizvi; Julia A O'Hara; P Jack Hoopes; Stephen Pereira; Tayyaba Hasan; Brian W Pogue
Imaging tumor variation in response to photodynamic therapy in pancreatic cancer xenograft models.
International journal of radiation oncology, biology, physics 2010;76(1):251-9.
2010: Summer L Gibbs-Strauss; Kimberley S Samkoe; Julia A O'Hara; Scott C Davis; P Jack Hoopes; Tayyaba Hasan; Brian W Pogue
Detecting epidermal growth factor receptor tumor activity in vivo during cetuximab therapy of murine gliomas.
Academic radiology 2010;17(1):7-17.
2009: Dax L Kepshire; Hamid Dehghani; Frederic Leblond; Brian W Pogue
Automatic exposure control and estimation of effective system noise in diffuse fluorescence tomography.
Optics express 2009;17(25):23272-83.
2009: Shudong Jiang; Brian W Pogue; Colin M Carpenter; Steven P Poplack; Wendy A Wells; Christine Kogel; Jorge A Forero; Lori S Muffly; Gary N Schwartz; Keith D Paulsen; Peter A Kaufman
Evaluation of breast tumor response to neoadjuvant chemotherapy with tomographic diffuse optical spectroscopy: case studies of tumor region-of-interest changes.
Radiology 2009;252(2):551-60.
2009: Pilar Beatriz Garcia-Allende; Venkataramanan Krishnaswamy; P Jack Hoopes; Kimberley S Samkoe; Olga M Conde; Brian W Pogue
Automated identification of tumor microscopic morphology based on macroscopically measured scatter signatures.
Journal of biomedical optics 2009;14(3):034034.
2009: Dax Kepshire; Niculae Mincu; Michael Hutchins; Josiah Gruber; Hamid Dehghani; Justin Hypnarowski; Frederic Leblond; Mario Khayat; Brian W Pogue
A microcomputed tomography guided fluorescence tomography system for small animal molecular imaging.
The Review of scientific instruments 2009;80(4):043701.
2009: Marc Schegerin; Anna Tosteson; Peter A Kaufman; Keith D Paulsen; Brian W Pogue
Prognostic imaging in neoadjuvant chemotherapy of locally-advanced breast cancer should be cost-effective.
Breast cancer research and treatment 2009;114(3):537-47.
2009: Summer L Gibbs-Strauss; Julia A O'Hara; Subhadra Srinivasan; P Jack Hoopes; Tayyaba Hasan; Brian W Pogue
Diagnostic detection of diffuse glioma tumors in vive with molecular fluorescent probe-based transmission spectroscopy.
Medical physics 2009;36(3):974-83.
2009: Subhadra Srinivasan; Colin Carpenter; Brian W Pogue
Sensitivity of hemoglobin concentration on optical probe positioning in image-guided near infrared spectroscopy.
Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2009;2009():1994-6.
2009: Summer L Gibbs-Strauss; Julia A O'Hara; P Jack Hoopes; Tayyaba Hasan; Brian W Pogue
Noninvasive measurement of aminolevulinic acid-induced protoporphyrin IX fluorescence allowing detection of murine glioma in vivo.
Journal of biomedical optics 2009;14(1):014007.
2009: Venkataramanan Krishnaswamy; P Jack Hoopes; Kimberley S Samkoe; Julia A O'Hara; Tayyaba Hasan; Brian W Pogue
Quantitative imaging of scattering changes associated with epithelial proliferation, necrosis, and fibrosis in tumors using microsampling reflectance spectroscopy.
Journal of biomedical optics 2009;14(1):014004.
2008: Colin M Carpenter; Subhadra Srinivasan; Brian W Pogue; Keith D Paulsen
Methodology development for three-dimensional MR-guided near infrared spectroscopy of breast tumors.
Optics express 2008;16(22):17903-14.
2008: Subhadra Srinivasan; Matthew Schulmerich; Jacqueline H Cole; Kathryn A Dooley; Jaclynn M Kreider; Brian W Pogue; Michael D Morris; Steven A Goldstein
Image-guided Raman spectroscopic recovery of canine cortical bone contrast in situ.
Optics express 2008;16(16):12190-200.
2008: Bin Chen; Curtis Crane; Chong He; David Gondek; Priyanka Agharkar; Mark D Savellano; P Jack Hoopes; Brian W Pogue
Disparity between prostate tumor interior versus peripheral vasculature in response to verteporfin-mediated vascular-targeting therapy.
International journal of cancer. Journal international du cancer 2008;123(3):695-701.
2008: Jia Wang; Scott C Davis; Subhadra Srinivasan; Shudong Jiang; Brian W Pogue; Keith D Paulsen
Spectral tomography with diffuse near-infrared light: inclusion of broadband frequency domain spectral data.
Journal of biomedical optics 2008;13(4):041305.
2008: Dax Kepshire; Scott C Davis; Hamid Dehghani; Keith D Paulsen; Brian W Pogue
Fluorescence tomography characterization for sub-surface imaging with protoporphyrin IX.
Optics express 2008;16(12):8581-93.
2008: Scott C Davis; Brian W Pogue; Roger Springett; Christoph Leussler; Peter Mazurkewitz; Stephen B Tuttle; Summer L Gibbs-Strauss; Shudong S Jiang; Hamid Dehghani; Keith D Paulsen
Magnetic resonance-coupled fluorescence tomography scanner for molecular imaging of tissue.
The Review of scientific instruments 2008;79(6):064302.
2008: Brian W Pogue; Chao Sheng; Juan Benevides; David Forcione; Bill Puricelli; Norm Nishioka; Tayyaba Hasan
Protoporphyrin IX fluorescence photobleaching increases with the use of fractionated irradiation in the esophagus.
Journal of biomedical optics 2008;13(3):034009.
2008: Phaneendra K Yalavarthy; Daniel R Lynch; Brian W Pogue; Hamid Dehghani; Keith D Paulsen
Implementation of a computationally efficient least-squares algorithm for highly under-determined three-dimensional diffuse optical tomography problems.
Medical physics 2008;35(5):1682-97.
2007: Matthew E Eames; Brian W Pogue; Phaneendra K Yalavarthy; Hamid Dehghani
An efficient Jacobian reduction method for diffuse optical image reconstruction.
Optics express 2007;15(24):15908-19.
2007: Subhadra Srinivasan; Brian W Pogue; Colin Carpenter; Phaneendra K Yalavarthy; Keith D Paulsen
A boundary element approach for image-guided near-infrared absorption and scatter estimation.
Medical physics 2007;34(11):4545-57.
2007: Xiaomei Song; Brian W Pogue; Hamid Dehghani; Shudong Jiang; Keith D Paulsen; Tor D Tosteson
Receiver operating characteristic and location analysis of simulated near-infrared tomography images.
Journal of biomedical optics 2007;12(5):054013.
2007: Xiaodong Zhou; Bin Chen; P Jack Hoopes; Tayyaba Hasan; Brian W Pogue
Peptide-induced inflammatory increase in vascular permeability improves photosensitizer delivery and intersubject photodynamic treatment efficacy.
Radiation research 2007;168(3):299-307.
2007: Subhadra Srinivasan; Brian W Pogue; Colin Carpenter; Shudong Jiang; Wendy A Wells; Steven P Poplack; Peter A Kaufman; Keith D Paulsen
Developments in quantitative oxygen-saturation imaging of breast tissue in vivo using multispectral near-infrared tomography.
Antioxidants & redox signaling 2007;9(8):1143-56.
2007: A L Darling; Phaneendra K Yalavarthy; Marvin doyley; Hamid Dehghani; Brian W Pogue
Interstitial fluid pressure in soft tissue as a result of an externally applied contact pressure.
Physics in medicine and biology 2007;52(14):4121-36.
2007: Phaneendra K Yalavarthy; Brian W Pogue; Hamid Dehghani; Colin M Carpenter; Shudong Jiang; Keith D Paulsen
Structural information within regularization matrices improves near infrared diffuse optical tomography.
Optics express 2007;15(13):8043-58.
2007: Phaneendra K Yalavarthy; Brian W Pogue; Hamid Dehghani; Keith D Paulsen
Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography.
Medical physics 2007;34(6):2085-98.
2007: Chao Sheng; P Jack Hoopes; Tayyaba Hasan; Brian W Pogue
Photobleaching-based dosimetry predicts deposited dose in ALA-PpIX PDT of rodent esophagus.
Photochemistry and photobiology 2007;83(3):738-48.
2007: Steven P Poplack; Tor D Tosteson; Wendy A Wells; Brian W Pogue; Paul M Meaney; Alex Hartov; Christine Kogel; Sandra K Soho; Jennifer J Gibson; Keith D Paulsen
Electromagnetic breast imaging: results of a pilot study in women with abnormal mammograms.
Radiology 2007;243(2):350-9.
2007: Colin M Carpenter; Brian W Pogue; Shudong Jiang; Hamid Dehghani; Xin Wang; Keith D Paulsen; Wendy A Wells; Jorge Forero; Christine Kogel; John B Weaver; Steven P Poplack; Peter A Kaufman
Image-guided optical spectroscopy provides molecular-specific information in vivo: MRI-guided spectroscopy of breast cancer hemoglobin, water, and scatterer size.
Optics letters 2007;32(8):933-5.
2007: Dax S Kepshire; Scott C Davis; Hamid Dehghani; Keith D Paulsen; Brian W Pogue
Subsurface diffuse optical tomography can localize absorber and fluorescent objects but recovered image sensitivity is nonlinear with depth.
Applied optics 2007;46(10):1669-78.
2007: Daqing Piao; Brian W Pogue
Rapid near-infrared diffuse tomography for hemodynamic imaging using a low-coherence wideband light source.
Journal of biomedical optics 2007;12(1):014016.
2006: Matthew Bartek; Xin Wang; Wendy Wells; Keith D Paulsen; Brian W Pogue
Estimation of subcellular particle size histograms with electron microscopy for prediction of optical scattering in breast tissue.
Journal of biomedical optics 2006;11(6):064007.
2006: Daqing Piao; Hao Xie; Weili Zhang; Jerzy S Krasinski; Guolong Zhang; Hamid Dehghani; Brian W Pogue
Endoscopic, rapid near-infrared optical tomography.
Optics letters 2006;31(19):2876-8.
2006: Xiaodong Zhou; Bin Chen; P Jack Hoopes; Tayyaba Hasan; Brian W Pogue
Tumor vascular area correlates with photosensitizer uptake: analysis of verteporfin microvascular delivery in the Dunning rat prostate tumor.
Photochemistry and photobiology 2006;82(5):1348-57.
2006: Summer L Gibbs; Bin Chen; Julia A O'Hara; P Jack Hoopes; Tayyaba Hasan; Brian W Pogue
Protoporphyrin IX level correlates with number of mitochondria, but increase in production correlates with tumor cell size.
Photochemistry and photobiology 2006;82(5):1334-41.
2006: Xin Wang; Brian W Pogue; Shudong Jiang; Hamid Dehghani; Xiaomei Song; Subhadra Srinivasan; Ben Brooksby; Keith D Paulsen; Christine Kogel; Steven P Poplack; Wendy A Wells
Image reconstruction of effective Mie scattering parameters of breast tissue in vivo with near-infrared tomography.
Journal of biomedical optics 2006;11(4):041106.
2006: Brian W Pogue; Michael S Patterson
Review of tissue simulating phantoms for optical spectroscopy, imaging and dosimetry.
Journal of biomedical optics 2006;11(4):041102.
2006: Phaneendra K Yalavarthy; Hamid Dehghani; Brian W Pogue; Keith D Paulsen
Critical computational aspects of near infrared circular tomographic imaging: Analysis of measurement number, mesh resolution and reconstruction basis.
Optics express 2006;14(13):6113-27.
2006: Ben Brooksby; Brian W Pogue; Shudong Jiang; Hamid Dehghani; Subhadra Srinivasan; Christine Kogel; Tor D Tosteson; John Weaver; Steven P Poplack; Keith D Paulsen
Imaging breast adipose and fibroglandular tissue molecular signatures by using hybrid MRI-guided near-infrared spectral tomography.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(23):8828-33.
2006: Brian W Pogue; Scott C Davis; Xiaomei Song; Ben Brooksby; Hamid Dehghani; Keith D Paulsen
Image analysis methods for diffuse optical tomography.
Journal of biomedical optics 2006;11(3):33001.
2006: Xiaodong Zhou; Brian W Pogue; Bin Chen; Eugene Demidenko; Rohan Joshi; Jack Hoopes; Tayyaba Hasan
Pretreatment photosensitizer dosimetry reduces variation in tumor response.
International journal of radiation oncology, biology, physics 2006;64(4):1211-20.
2006: Hamid Dehghani; Scott C Davis; Shudong Jiang; Brian W Pogue; Keith D Paulsen; Michael S Patterson
Spectrally resolved bioluminescence optical tomography.
Optics letters 2006;31(3):365-7.
2006: Subhadra Srinivasan; Brian W Pogue; Shudong Jiang; Hamid Dehghani; Christine Kogel; Sandra K Soho; Jennifer J Gibson; Tor D Tosteson; Steven P Poplack; Keith D Paulsen
In vivo hemoglobin and water concentrations, oxygen saturation, and scattering estimates from near-infrared breast tomography using spectral reconstruction.
Academic radiology 2006;13(2):195-202.
2005: Heng Xu; Brian W Pogue; Roger Springett; Hamid Dehghani
Spectral derivative based image reconstruction provides inherent insensitivity to coupling and geometric errors.
Optics letters 2005;30(21):2912-4.
2005: Marcela G del Carmen; Imran Rizvi; Yuchiao Chang; Anne Moor; Esther Oliva; Margaret Sherwood; Brian W Pogue; Tayyaba Hasan
Synergism of epidermal growth factor receptor-targeted immunotherapy with photodynamic treatment of ovarian cancer in vivo.
Journal of the National Cancer Institute 2005;97(20):1516-24.
2005: Daqing Piao; Shudong Jiang; Subhadra Srinivasan; Hamid Dehghani; Brian W Pogue
Video-rate near-infrared optical tomography using spectrally encoded parallel light delivery.
Optics letters 2005;30(19):2593-5.
2005: Subhadra Srinivasan; Brian W Pogue; Ben Brooksby; Shudong Jiang; Hamid Dehghani; Christine Kogel; Wendy A Wells; Steven P Poplack; Keith D Paulsen
Near-infrared characterization of breast tumors in vivo using spectrally-constrained reconstruction.
Technology in cancer research & treatment 2005;4(5):513-26.
2005: Xin Wang; Brian W Pogue; Shudong Jiang; Xiaomei Song; Keith D Paulsen; Christine Kogel; Steven P Poplack; Wendy A Wells
Approximation of Mie scattering parameters in near-infrared tomography of normal breast tissue in vivo.
Journal of biomedical optics 2005;10(5):051704.
2005: Ben Brooksby; Shudong Jiang; Hamid Dehghani; Brian W Pogue; Keith D Paulsen; John Weaver; Christine Kogel; Steven P Poplack
Combining near-infrared tomography and magnetic resonance imaging to study in vivo breast tissue: implementation of a Laplacian-type regularization to incorporate magnetic resonance structure.
Journal of biomedical optics 2005;10(5):051504.
2005: Scott C Davis; Brian W Pogue; Hamid Dehghani; Keith D Paulsen
Contrast-detail analysis characterizing diffuse optical fluorescence tomography image reconstruction.
Journal of biomedical optics 2005;10(5):050501.
2005: Ben Brooksby; Subhadra Srinivasan; Shudong Jiang; Hamid Dehghani; Brian W Pogue; Keith D Paulsen; John Weaver; Christine Kogel; Steven P Poplack
Spectral priors improve near-infrared diffuse tomography more than spatial priors.
Optics letters 2005;30(15):1968-70.
2005: Mark D Savellano; Brian W Pogue; P Jack Hoopes; Ellen S Vitetta; Keith D Paulsen
Multiepitope HER2 targeting enhances photoimmunotherapy of HER2-overexpressing cancer cells with pyropheophorbide-a immunoconjugates.
Cancer research 2005;65(14):6371-9.
2005: Brian W Pogue; Bin Chen; Xiaodong Zhou; P Jack Hoopes
Analysis of sampling volume and tissue heterogeneity on the in vivo detection of fluorescence.
Journal of biomedical optics 2005;10(4):41206.
2005: Heng Xu; Roger Springett; Hamid Dehghani; Brian W Pogue; Keith D Paulsen; Jeff Dunn
Magnetic-resonance-imaging-coupled broadband near-infrared tomography system for small animal brain studies.
Applied optics 2005;44(11):2177-88.
2005: Hamid Dehghani; Ben Brooksby; Brian W Pogue; Keith D Paulsen
Effects of refractive index on near-infrared tomography of the breast.
Applied optics 2005;44(10):1870-8.
2005: Subhadra Srinivasan; Brian W Pogue; Shudong Jiang; Hamid Dehghani; Keith D Paulsen
Spectrally constrained chromophore and scattering near-infrared tomography provides quantitative and robust reconstruction.
Applied optics 2005;44(10):1858-69.
2005: Bin Chen; Brian W Pogue; P Jack Hoopes; Tayyaba Hasan
Combining vascular and cellular targeting regimens enhances the efficacy of photodynamic therapy.
International journal of radiation oncology, biology, physics 2005;61(4):1216-26.
2005: Bin Chen; Brian W Pogue; Xiaodong Zhou; Julia A O'Hara; Nicolas Solban; Eugene Demidenko; P Jack Hoopes; Tayyaba Hasan
Effect of tumor host microenvironment on photodynamic therapy in a rat prostate tumor model.
Clinical cancer research : an official journal of the American Association for Cancer Research 2005;11(2 Pt 1):720-7.
2005: Nicolas Solban; Bernhard Ortel; Brian W Pogue; Tayyaba Hasan
Targeted optical imaging and photodynamic therapy.
Ernst Schering Research Foundation workshop 2005;(49):229-58.
2004: Subhadra Srinivasan; Brian W Pogue; Hamid Dehghani; Shudong Jiang; Xiaomei Song; Keith D Paulsen
Improved quantification of small objects in near-infrared diffuse optical tomography.
Journal of biomedical optics 2004;9(6):1161-71.
2004: Heng Xu; Brian W Pogue; Hamid Dehghani; Keith D Paulsen
Absorption and scattering imaging of tissue with steady-state second-differential spectral-analysis tomography.
Optics letters 2004;29(17):2043-5.
2004: Chao Sheng; Brian W Pogue; Eileen Wang; John E Hutchins; P Jack Hoopes
Assessment of photosensitizer dosimetry and tissue damage assay for photodynamic therapy in advanced-stage tumors.
Photochemistry and photobiology 2004;79(6):520-5.
2004: Brian W Pogue; Shudong Jiang; Hamid Dehghani; Christine Kogel; Sandra K Soho; Subhadra Srinivasan; Xiaomei Song; Tor D Tosteson; Steven P Poplack; Keith D Paulsen
Characterization of hemoglobin, water, and NIR scattering in breast tissue: analysis of intersubject variability and menstrual cycle changes.
Journal of biomedical optics 2004;9(3):541-52.
2004: Steven P Poplack; Keith D Paulsen; Alex Hartov; Paul M Meaney; Brian W Pogue; Tor D Tosteson; Margaret R Grove; Sandra K Soho; Wendy A Wells
Electromagnetic breast imaging: average tissue property values in women with negative clinical findings.
Radiology 2004;231(2):571-80.
2004: Hamid Dehghani; Marvin doyley; Brian W Pogue; Shudong Jiang; Jason Geng; Keith D Paulsen
Breast deformation modelling for image reconstruction in near infrared optical tomography.
Physics in medicine and biology 2004;49(7):1131-45.
2004: Xiaodong Zhou; Brian W Pogue; Bin Chen; Tayyaba Hasan
Analysis of effective molecular diffusion rates for verteporfin in subcutaneous versus orthotopic Dunning prostate tumors.
Photochemistry and photobiology 2004;79(4):323-31.
2004: Xiaomei Song; Brian W Pogue; Shudong Jiang; Marvin doyley; Hamid Dehghani; Tor D Tosteson; Keith D Paulsen
Automated region detection based on the contrast-to-noise ratio in near-infrared tomography.
Applied optics 2004;43(5):1053-62.
2004: Brian W Pogue; Summer L Gibbs; Bin Chen; Mark D Savellano
Fluorescence imaging in vivo: raster scanned point-source imaging provides more accurate quantification than broad beam geometries.
Technology in cancer research & treatment 2004;3(1):15-21.
2004: Paul M Meaney; C J Fox; Q Fang; Christine Kogel; Steven P Poplack; Brian W Pogue; Keith D Paulsen
Comparison of fibroglandular tissue distributions for microwave tomographic breast images with complementary MR T2 weighted images.
Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2004;2():1314-6.
2003: Subhadra Srinivasan; Brian W Pogue; Shudong Jiang; Hamid Dehghani; Christine Kogel; Sandra K Soho; Jennifer J Gibson; Tor D Tosteson; Steven P Poplack; Keith D Paulsen
Interpreting hemoglobin and water concentration, oxygen saturation, and scattering measured in vivo by near-infrared breast tomography.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(21):12349-54.
2003: Bin Chen; Brian W Pogue; Isak A Goodwin; Julia A O'Hara; Carmen Wilmot; John E Hutchins; P Jack Hoopes; Tayyaba Hasan
Blood flow dynamics after photodynamic therapy with verteporfin in the RIF-1 tumor.
Radiation research 2003;160(4):452-9.
2003: Hamid Dehghani; Ben Brooksby; Karthik Vishwanath; Brian W Pogue; Keith D Paulsen
The effects of internal refractive index variation in near-infrared optical tomography: a finite element modelling approach.
Physics in medicine and biology 2003;48(16):2713-27.
2003: Dun Li; Paul M Meaney; Tor D Tosteson; Shudong Jiang; Todd E Kerner; Troy O McBride; Brian W Pogue; Alex Hartov; Keith D Paulsen
Comparisons of three alternative breast modalities in a common phantom imaging experiment.
Medical physics 2003;30(8):2194-205.
2003: Shudong Jiang; Brian W Pogue; Keith D Paulsen; Christine Kogel; Steven P Poplack
In vivo near-infrared spectral detection of pressure-induced changes in breast tissue.
Optics letters 2003;28(14):1212-4.
2003: Hamid Dehghani; Brian W Pogue; Jiang Shudong; Ben Brooksby; Keith D Paulsen
Three-dimensional optical tomography: resolution in small-object imaging.
Applied optics 2003;42(16):3117-28.
2003: Shudong Jiang; Brian W Pogue; Troy O McBride; Keith D Paulsen
Quantitative analysis of near-infrared tomography: sensitivity to the tissue-simulating precalibration phantom.
Journal of biomedical optics 2003;8(2):308-15.
2003: Brian W Pogue; Julia A O'Hara; Eugene Demidenko; Carmen Wilmot; Isak A Goodwin; Bin Chen; Harold M Swartz; Tayyaba Hasan
Photodynamic therapy with verteporfin in the radiation-induced fibrosarcoma-1 tumor causes enhanced radiation sensitivity.
Cancer research 2003;63(5):1025-33.
2003: Claudia C Lee; Brian W Pogue; Julia A O'Hara; Carmen Wilmot; Rendy R Strawbridge; Gregory C Burke; P Jack Hoopes
Spatial heterogeneity and temporal kinetics of photosensitizer (AlPcS2) concentration in murine tumors RIF-1 and MTG-B.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 2003;2(2):145-50.
2003: Brian W Pogue; Haoqin Zhu; Casmiar I Nwaigwe; Troy O McBride; Ulf L Osterberg; Keith D Paulsen; Jeff Dunn
Hemoglobin imaging with hybrid magnetic resonance and near-infrared diffuse tomography.
Advances in experimental medicine and biology 2003;530():215-24.
2003: Troy O McBride; Brian W Pogue; Ulf L Osterberg; Keith D Paulsen
Strategies for absolute calibration of near infrared tomographic tissue imaging.
Advances in experimental medicine and biology 2003;530():85-99.
2003: Heng Xu; Hamid Dehghani; Brian W Pogue; Roger Springett; Keith D Paulsen; Jeff Dunn
Near-infrared imaging in the small animal brain: optimization of fiber positions.
Journal of biomedical optics 2003;8(1):102-10.
2003: Hamid Dehghani; Brian W Pogue; Steven P Poplack; Keith D Paulsen
Multiwavelength three-dimensional near-infrared tomography of the breast: initial simulation, phantom, and clinical results.
Applied optics 2003;42(1):135-45.
2002: Karthik Vishwanath; Brian W Pogue; Mary-Ann Mycek
Quantitative fluorescence lifetime spectroscopy in turbid media: comparison of theoretical, experimental and computational methods.
Physics in medicine and biology 2002;47(18):3387-405.
2002: Xiaomei Song; Brian W Pogue; Tor D Tosteson; Troy O McBride; Shudong Jiang; Keith D Paulsen
Statistical analysis of nonlinearly reconstructed near-infrared tomographic images: Part II--Experimental interpretation.
IEEE transactions on medical imaging 2002;21(7):764-72.
2002: Brian W Pogue; Xiaomei Song; Tor D Tosteson; Troy O McBride; Shudong Jiang; Keith D Paulsen
Statistical analysis of nonlinearly reconstructed near-infrared tomographic images: Part I--Theory and simulations.
IEEE transactions on medical imaging 2002;21(7):755-63.
2002: Brian W Pogue; Julia A O'Hara; Isak A Goodwin; Carmen Wilmot; Gregory P Fournier; Altug R Akay; Harold Swartz
Tumor PO(2) changes during photodynamic therapy depend upon photosensitizer type and time after injection.
Comparative biochemistry and physiology. Part A, Molecular & integrative physiology 2002;132(1):177-84.
2002: Troy O McBride; Brian W Pogue; Steven P Poplack; Sandra K Soho; Wendy A Wells; Shudong Jiang; Ulf L Osterberg; Keith D Paulsen
Multispectral near-infrared tomography: a case study in compensating for water and lipid content in hemoglobin imaging of the breast.
Journal of biomedical optics 2002;7(1):72-9.
2001: Brian W Pogue; J D Pitts; Mary-Ann Mycek; Roger D Sloboda; Carmen Wilmot; J F Brandsema; Julia A O'Hara
In vivo NADH fluorescence monitoring as an assay for cellular damage in photodynamic therapy.
Photochemistry and photobiology 2001;74(6):817-24.
2001: Brian W Pogue; Rod D Braun; Jennifer Lanzen; C Erickson; Mark Dewhirst
Analysis of the heterogeneity of pO2 dynamics during photodynamic therapy with verteporfin.
Photochemistry and photobiology 2001;74(5):700-6.
2001: Brian W Pogue; H B Kaufman; Alex Zelenchuk; W Harper; Gregory C Burke; E E Burke; Diane M Harper
Analysis of acetic acid-induced whitening of high-grade squamous intraepithelial lesions.
Journal of biomedical optics 2001;6(4):397-403.
2001: T O McBride; Brian W Pogue; Shudong Jiang; Ulf L Osterberg; Keith D Paulsen; Steven P Poplack
Initial studies of in vivo absorbing and scattering heterogeneity in near-infrared tomographic breast imaging.
Optics letters 2001;26(11):822-4.
2001: Paul M Meaney; Keith D Paulsen; Brian W Pogue; Michael I Miga
Microwave image reconstruction utilizing log-magnitude and unwrapped phase to improve high-contrast object recovery.
IEEE transactions on medical imaging 2001;20(2):104-16.
2001: Brian W Pogue; Bernhard Ortel; N Chen; Robert W Redmond; Tayyaba Hasan
A photobiological and photophysical-based study of phototoxicity of two chlorins.
Cancer research 2001;61(2):717-24.
2001: Brian W Pogue; Steven P Poplack; Troy O McBride; Wendy A Wells; K Sunshine Osterman; Ulf L Osterberg; Keith D Paulsen
Quantitative hemoglobin tomography with diffuse near-infrared spectroscopy: pilot results in the breast.
Radiology 2001;218(1):261-6.
2001: Brian W Pogue; Keith D Paulsen; Julia A O'Hara; Carmen Wilmot; Harold M Swartz
Estimation of oxygen distribution in RIF-1 tumors by diffusion model-based interpretation of pimonidazole hypoxia and eppendorf measurements.
Radiation research 2001;155(1 Pt 1):15-25.
2000: Brian W Pogue; C Willscher; Troy O McBride; Ulf L Osterberg; Keith D Paulsen
Contrast-detail analysis for detection and characterization with near-infrared diffuse tomography.
Medical physics 2000;27(12):2693-700.
2000: Brian W Pogue; Keith D Paulsen; C Abele; H Kaufman
Calibration of near-infrared frequency-domain tissue spectroscopy for absolute absorption coefficient quantitation in neonatal head-simulating phantoms.
Journal of biomedical optics 2000;5(2):185-93.
2000: Brian W Pogue; Mary-Ann Mycek; D Harper
Image analysis for discrimination of cervical neoplasia.
Journal of biomedical optics 2000;5(1):72-82.
1998: Brian W Pogue; Robert W Redmond; N Trivedi; Tayyaba Hasan
Photophysical properties of tin ethyl etiopurpurin I (SnET2) and tin octaethylbenzochlorin (SnOEBC) in solution and bound to albumin.
Photochemistry and photobiology 1998;68(6):809-15.
1997: Brian W Pogue; Tayyaba Hasan
A theoretical study of light fractionation and dose-rate effects in photodynamic therapy.
Radiation research 1997;147(5):551-9.