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Ana Pombo

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Mariano Barbieri; Mita Chotalia; Josée Dostie; James Fraser; Liron-Mark Lavitas; Ana Pombo; Mario Nicodemi
A model of the large-scale organization of chromatin.
Mariano Barbieri; Mita Chotalia; Josée Dostie; James Fraser; Liron-Mark Lavitas; Ana Pombo; Mario Nicodemi
Complexity of chromatin folding is captured by the strings and binders switch model.
André Möller; Jürgen K Naggert; Hemali P Phatnani; M Madan Babu; Gayle B Collin; Arno L Greenleaf; Fabian Hosp; Sonya James; Benjamin Lang; Francisco Ramirez; Matthias Selbach; Sheila Q Xie; Ana Pombo
Proteomic analysis of mitotic RNA polymerase II reveals novel interactors and association with proteins dysfunctional in disease.

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All Publications

2013: Mariano Barbieri; Mita Chotalia; Josée Dostie; James Fraser; Liron-Mark Lavitas; Ana Pombo; Mario Nicodemi
A model of the large-scale organization of chromatin.
Biochemical Society transactions 2013;41(2):508-12.
2012: Mariano Barbieri; Mita Chotalia; Josée Dostie; James Fraser; Liron-Mark Lavitas; Ana Pombo; Mario Nicodemi
Complexity of chromatin folding is captured by the strings and binders switch model.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(40):16173-8.
2012: André Möller; Jürgen K Naggert; Hemali P Phatnani; M Madan Babu; Gayle B Collin; Arno L Greenleaf; Fabian Hosp; Sonya James; Benjamin Lang; Francisco Ramirez; Matthias Selbach; Sheila Q Xie; Ana Pombo
Proteomic analysis of mitotic RNA polymerase II reveals novel interactors and association with proteins dysfunctional in disease.
Molecular & cellular proteomics : MCP 2012;11(6):M111.011767.
2012: Emily Brookes; Ana Pombo
Code breaking: the RNAPII modification code in pluripotency.
Cell cycle (Georgetown, Tex.) 2012;11(7):1267-8.
2012: Emily Brookes; Tom Carroll; Inês de Santiago; Dirk Eick; Daniel Hebenstreit; Martin Heidemann; Hiroshi Kimura; Kelly J Morris; Naohito Nozaki; Jiannis Ragoussis; Julie K Stock; Sarah A Teichmann; Sheila Q Xie; Ana Pombo
Polycomb associates genome-wide with a specific RNA polymerase II variant, and regulates metabolic genes in ESCs.
Cell stem cell 2012;10(2):157-70.
2011: Ana Pombo; Daniel A Starr
Nuclear cell biology.
Molecular biology of the cell 2011;22(6):722.
2011: Mita Chotalia; Ana Pombo
Polycomb targets seek closest neighbours.
PLoS genetics 2011;7(3):e1002031.
2010: Ana Pombo; David M Gilbert
Nucleus and gene expression: the structure and function conundrum.
Current opinion in cell biology 2010;22(3):269-70.
2010: Carmelo Ferrai; Inês Jesus de Castro; Liron Lavitas; Mita Chotalia; Ana Pombo
Gene positioning.
Cold Spring Harbor perspectives in biology 2010;2(6):a000588.
2010: David Landeira; Stephan Sauer; Raymond A Poot; Maria Dvorkina; Luca Mazzarella; Helle F Jørgensen; Carlos Filipe Pereira; Marion Leleu; Francesco M Piccolo; Mikhail Spivakov; Emily Brookes; Ana Pombo; Cynthia Fisher; William C Skarnes; Tim Snoek; Karel Bezstarosti; Jeroen Demmers; Robert J Klose; Miguel Casanova; Ligia Tavares; Neil Brockdorff; Matthias Merkenschlager; Amanda G Fisher
Jarid2 is a PRC2 component in embryonic stem cells required for multi-lineage differentiation and recruitment of PRC1 and RNA Polymerase II to developmental regulators.
Nature cell biology 2010;12(6):618-24.
2010: Kelly J Morris; Mita Chotalia; Ana Pombo
Nuclear architecture in stem cells.
Advances in experimental medicine and biology 2010;695():14-25.
2010: Sheila Q Xie; Liron-Mark Lavitas; Ana Pombo
CryoFISH: fluorescence in situ hybridization on ultrathin cryosections.
Methods in molecular biology (Clifton, N.J.) 2010;659():219-30.
2009: Emily Brookes; Ana Pombo
Modifications of RNA polymerase II are pivotal in regulating gene expression states.
EMBO reports 2009;10(11):1213-9.
2009: Kyoko Hiragami-Hamada; Sheila Q Xie; Alexander Saveliev; Santiago Uribe-Lewis; Ana Pombo; Richard Festenstein
The molecular basis for stability of heterochromatin-mediated silencing in mammals.
Epigenetics & chromatin 2009;2(1):14.
2009: Apolinar Maya-Mendoza; Chi W Tang; Ana Pombo; Dean A Jackson
Mechanisms regulating S phase progression in mammalian cells.
Frontiers in bioscience : a journal and virtual library 2009;14():4199-213.
2009: Carmelo Ferrai; Ana Pombo
3D chromatin regulation of Sonic hedgehog in the limb buds.
Developmental cell 2009;16(1):9-11.
2008: Miguel R Branco; Tiago Branco; Francisco Ramirez; Ana Pombo
Changes in chromosome organization during PHA-activation of resting human lymphocytes measured by cryo-FISH.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2008;16(3):413-26.
2007: Ana Pombo; Miguel R Branco
Functional organisation of the genome during interphase.
Current opinion in genetics & development 2007;17(5):451-5.
2007: Ana Pombo
Advances in imaging the interphase nucleus using thin cryosections.
Histochemistry and cell biology 2007;128(2):97-104.
2007: Miguel R Branco; Ana Pombo
Chromosome organization: new facts, new models.
Trends in cell biology 2007;17(3):127-34.
2006: Miguel R Branco; Ana Pombo
Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations.
PLoS biology 2006;4(5):e138.
2006: Sheila Q Xie; Sonya Martin; Pascale V Guillot; David L Bentley; Ana Pombo
Splicing speckles are not reservoirs of RNA polymerase II, but contain an inactive form, phosphorylated on serine2 residues of the C-terminal domain.
Molecular biology of the cell 2006;17(4):1723-33.
2006: Sheila Q Xie; Ana Pombo
Distribution of different phosphorylated forms of RNA polymerase II in relation to Cajal and PML bodies in human cells: an ultrastructural study.
Histochemistry and cell biology 2006;125(1-2):21-31.
2004: Emma Kenny; David Mason; Abdelhadi Saoudi; Ana Pombo; Francisco Ramírez
CD8 alpha is an activation marker for a subset of peripheral CD4 T cells.
European journal of immunology 2004;34(5):1262-71.
2004: Pascale V Guillot; Sheila Q Xie; Michael Hollinshead; Ana Pombo
Fixation-induced redistribution of hyperphosphorylated RNA polymerase II in the nucleus of human cells.
Experimental cell research 2004;295(2):460-8.
2003: Diana C Boyd; Ana Pombo; Shona Murphy
Interaction of proteins with promoter elements of the human U2 snRNA genes in vivo.
Gene 2003;315():103-12.
2003: Sonya Martin; Ana Pombo
Transcription factories: quantitative studies of nanostructures in the mammalian nucleus.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2003;11(5):461-70.
2001: John M Robinson; Toshihiro Takizawa; Ana Pombo; Peter R Cook
Correlative fluorescence and electron microscopy on ultrathin cryosections: bridging the resolution gap.
The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society 2001;49(7):803-8.
2000: E Kenny; David Mason; Ana Pombo; Francisco Ramírez
Phenotypic analysis of peripheral CD4+ CD8+ T cells in the rat.
Immunology 2000;101(2):178-84.
2000: Dean A Jackson; Ana Pombo; Francisco J Iborra
The balance sheet for transcription: an analysis of nuclear RNA metabolism in mammalian cells.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology 2000;14(2):242-54.
2000: Ana Pombo; E Jones; Francisco J Iborra; H Kimura; K Sugaya; Peter R Cook; Dean A Jackson
Specialized transcription factories within mammalian nuclei.
Critical reviews in eukaryotic gene expression 2000;10(1):21-9.
1999: Ana Pombo; Dean A Jackson; Michael Hollinshead; Z Wang; RG Roeder; Peter R Cook
Regional specialization in human nuclei: visualization of discrete sites of transcription by RNA polymerase III.
The EMBO journal 1999;18(8):2241-53.
1999: Ana Pombo; Michael Hollinshead; Peter R Cook
Bridging the resolution gap: Imaging the same transcription factories in cryosections by light and electron microscopy.
The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society 1999;47(4):471-80.
1998: Michelle Wykes; Ana Pombo; Christopher Jenkins; G Gordon MacPherson
Dendritic cells interact directly with naive B lymphocytes to transfer antigen and initiate class switching in a primary T-dependent response.
Journal of immunology (Baltimore, Md. : 1950) 1998;161(3):1313-9.
1998: Dean A Jackson; Ana Pombo
Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells.
The Journal of cell biology 1998;140(6):1285-95.
1998: Ana Pombo; P Cuello; W Schul; J B Yoon; RG Roeder; Peter R Cook; Shona Murphy
Regional and temporal specialization in the nucleus: a transcriptionally-active nuclear domain rich in PTF, Oct1 and PIKA antigens associates with specific chromosomes early in the cell cycle.
The EMBO journal 1998;17(6):1768-78.
1996: Ana Pombo; Peter R Cook
The localization of sites containing nascent RNA and splicing factors.
Experimental cell research 1996;229(2):201-3.
1996: Francisco J Iborra; Ana Pombo; J McManus; Dean A Jackson; Peter R Cook
The topology of transcription by immobilized polymerases.
Experimental cell research 1996;229(2):167-73.
1996: Francisco J Iborra; Ana Pombo; Dean A Jackson; Peter R Cook
Active RNA polymerases are localized within discrete transcription "factories' in human nuclei.
Journal of cell science 1996;109 ( Pt 6)():1427-36.
1995: T A Hughes; Ana Pombo; J McManus; P Hozák; Dean A Jackson; Peter R Cook
On the structure of replication and transcription factories.
Journal of cell science. Supplement 1995;19():59-65.