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Satya Prakash

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Living Beings

Saccharomyces cerevisiae

Physiology

Chemicals & Drugs

Disorders

DNA Damage

Phenomena

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Genes & Molecular Sequences

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Co-Publications
Name
165
Prakash, Louise
68
Johnson, Robert
33
Haracska, Lajos
23
Washington, Todd
19
Guzder, Sami
17
Aggarwal, Aneel
16
Unk, Ildiko
9
Yu, Sung-Lim
9
Nair, Deepak
7
Torres-Ramos, Carlos
7
Acharya, Narottam
7
Hurwitz, Jerard
7
Wolfle, William
6
Sung, P
6
Minko, Irina

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Publications

TOP 3
Jain Rinku; Hammel Michal; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Structural insights into yeast DNA polymerase delta by small angle X-ray scattering.
Yoon Jung-Hoon; Prakash Louise; Prakash Satya
Highly error-free role of DNA polymerase eta in the replicative bypass of UV-induced pyrimidine dimers in mouse and human cells.
Swan Michael K; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase delta.

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All Publications

2009: Jain Rinku; Hammel Michal; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Structural insights into yeast DNA polymerase delta by small angle X-ray scattering.
Journal of molecular biology 2009;394(3):377-82.
2009: Yoon Jung-Hoon; Prakash Louise; Prakash Satya
Highly error-free role of DNA polymerase eta in the replicative bypass of UV-induced pyrimidine dimers in mouse and human cells.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(43):18219-24.
2009: Swan Michael K; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase delta.
Nature structural & molecular biology 2009;16(9):979-86.
2009: Jain Rinku; Nair Deepak T; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Replication across template T/U by human DNA polymerase-iota.
Structure (London, England : 1993) 2009;17(7):974-80.
2009: Swan Michael K; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Structure of the human Rev1-DNA-dNTP ternary complex.
Journal of molecular biology 2009;390(4):699-709.
2009: Pagès Vincent; Santa Maria Sergio R; Prakash Louise; Prakash Satya
Role of DNA damage-induced replication checkpoint in promoting lesion bypass by translesion synthesis in yeast.
Genes & development 2009;23(12):1438-49.
2009: Acharya Narottam; Johnson Robert E; Pagès Vincent; Prakash Louise; Prakash Satya
Yeast Rev1 protein promotes complex formation of DNA polymerase zeta with Pol32 subunit of DNA polymerase delta.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(24):9631-6.
2009: Nair Deepak T; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
DNA synthesis across an abasic lesion by human DNA polymerase iota.
Structure (London, England : 1993) 2009;17(4):530-7.
2009: Vasquez-Del Carpio Rodrigo; Silverstein Timothy D; Lone Samer; Swan Michael K; Choudhury Jayati R; Johnson Robert E; Prakash Satya; Prakash Louise; Aggarwal Aneel K
Structure of human DNA polymerase kappa inserting dATP opposite an 8-OxoG DNA lesion.
PloS one 2009;4(6):e5766.
2008: Acharya Narottam; Yoon Jung-Hoon; Gali Himabindu; Unk Ildiko; Haracska Lajos; Johnson Robert E; Hurwitz Jerard; Prakash Louise; Prakash Satya
Roles of PCNA-binding and ubiquitin-binding domains in human DNA polymerase eta in translesion DNA synthesis.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(46):17724-9.
2008: Unk Ildiko; Hajdú Ildikó; Fátyol Károly; Hurwitz Jerard; Yoon Jung-Hoon; Prakash Louise; Prakash Satya; Haracska Lajos
Human HLTF functions as a ubiquitin ligase for proliferating cell nuclear antigen polyubiquitination.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(10):3768-73.
2008: Nair Deepak T; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Protein-template-directed synthesis across an acrolein-derived DNA adduct by yeast Rev1 DNA polymerase.
Structure (London, England : 1993) 2008;16(2):239-45.
2008: Pagès Vincent; Johnson Robert E; Prakash Louise; Prakash Satya
Mutational specificity and genetic control of replicative bypass of an abasic site in yeast.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(4):1170-5.
2007: Santa Maria Sergio R; Gangavarapu Venkateswarlu; Johnson Robert E; Prakash Louise; Prakash Satya
Requirement of Nse1, a subunit of the Smc5-Smc6 complex, for Rad52-dependent postreplication repair of UV-damaged DNA in Saccharomyces cerevisiae.
Molecular and cellular biology 2007;27(23):8409-18.
2007: Acharya Narottam; Haracska Lajos; Prakash Satya; Prakash Louise
Complex formation of yeast Rev1 with DNA polymerase eta.
Molecular and cellular biology 2007;27(23):8401-8.
2007: Gangavarapu Venkateswarlu; Prakash Satya; Prakash Louise
Requirement of RAD52 group genes for postreplication repair of UV-damaged DNA in Saccharomyces cerevisiae.
Molecular and cellular biology 2007;27(21):7758-64.
2007: Blastyák András; Pintér Lajos; Unk Ildiko; Prakash Louise; Prakash Satya; Haracska Lajos
Yeast Rad5 protein required for postreplication repair has a DNA helicase activity specific for replication fork regression.
Molecular cell 2007;28(1):167-75.
2007: Acharya Narottam; Brahma Amrita; Haracska Lajos; Prakash Louise; Prakash Satya
Mutations in the ubiquitin binding UBZ motif of DNA polymerase eta do not impair its function in translesion synthesis during replication.
Molecular and cellular biology 2007;27(20):7266-72.
2007: Johnson Robert E; Yu Sung-Lim; Prakash Satya; Prakash Louise
A role for yeast and human translesion synthesis DNA polymerases in promoting replication through 3-methyl adenine.
Molecular and cellular biology 2007;27(20):7198-205.
2007: Ribar Balazs; Prakash Louise; Prakash Satya
ELA1 and CUL3 are required along with ELC1 for RNA polymerase II polyubiquitylation and degradation in DNA-damaged yeast cells.
Molecular and cellular biology 2007;27(8):3211-6.
2007: Lone Samer; Townson Sharon A; Uljon Sacha N; Johnson Robert E; Brahma Amrita; Nair Deepak T; Prakash Satya; Prakash Louise; Aggarwal Aneel K
Human DNA polymerase kappa encircles DNA: implications for mismatch extension and lesion bypass.
Molecular cell 2007;25(4):601-14.
2006: Acharya Narottam; Johnson Robert E; Prakash Satya; Prakash Louise
Complex formation with Rev1 enhances the proficiency of Saccharomyces cerevisiae DNA polymerase zeta for mismatch extension and for extension opposite from DNA lesions.
Molecular and cellular biology 2006;26(24):9555-63.
2006: Unk Ildiko; Hajdú Ildikó; Fátyol Károly; Szakál Barnabás; Blastyák András; Bermudez Vladimir; Hurwitz Jerard; Prakash Louise; Prakash Satya; Haracska Lajos
Human SHPRH is a ubiquitin ligase for Mms2-Ubc13-dependent polyubiquitylation of proliferating cell nuclear antigen.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(48):18107-12.
2006: Gangavarapu Venkateswarlu; Haracska Lajos; Unk Ildiko; Johnson Robert E; Prakash Satya; Prakash Louise
Mms2-Ubc13-dependent and -independent roles of Rad5 ubiquitin ligase in postreplication repair and translesion DNA synthesis in Saccharomyces cerevisiae.
Molecular and cellular biology 2006;26(20):7783-90.
2006: Johnson Robert E; Haracska Lajos; Prakash Louise; Prakash Satya
Role of hoogsteen edge hydrogen bonding at template purines in nucleotide incorporation by human DNA polymerase iota.
Molecular and cellular biology 2006;26(17):6435-41.
2006: Nair Deepak T; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Hoogsteen base pair formation promotes synthesis opposite the 1,N6-ethenodeoxyadenosine lesion by human DNA polymerase iota.
Nature structural & molecular biology 2006;13(7):619-25.
2006: Ribar Balazs; Prakash Louise; Prakash Satya
Requirement of ELC1 for RNA polymerase II polyubiquitylation and degradation in response to DNA damage in Saccharomyces cerevisiae.
Molecular and cellular biology 2006;26(11):3999-4005.
2006: Nair Deepak T; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
An incoming nucleotide imposes an anti to syn conformational change on the templating purine in the human DNA polymerase-iota active site.
Structure (London, England : 1993) 2006;14(4):749-55.
2006: Haracska Lajos; Unk Ildiko; Prakash Louise; Prakash Satya
Ubiquitylation of yeast proliferating cell nuclear antigen and its implications for translesion DNA synthesis.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(17):6477-82.
2006: Guzder Sami N; Sommers Christopher H; Prakash Louise; Prakash Satya
Complex formation with damage recognition protein Rad14 is essential for Saccharomyces cerevisiae Rad1-Rad10 nuclease to perform its function in nucleotide excision repair in vivo.
Molecular and cellular biology 2006;26(3):1135-41.
2006: Wolfle William T; Johnson Robert E; Minko Irina G; Lloyd R Stephen; Prakash Satya; Prakash Louise
Replication past a trans-4-hydroxynonenal minor-groove adduct by the sequential action of human DNA polymerases iota and kappa.
Molecular and cellular biology 2006;26(1):381-6.
2006: Johnson Robert E; Prakash Louise; Prakash Satya
Yeast and human translesion DNA synthesis polymerases: expression, purification, and biochemical characterization.
Methods in enzymology 2006;408():390-407.
2005: Haracska Lajos; Johnson Robert E; Prakash Louise; Prakash Satya
Trf4 and Trf5 proteins of Saccharomyces cerevisiae exhibit poly(A) RNA polymerase activity but no DNA polymerase activity.
Molecular and cellular biology 2005;25(22):10183-9.
2005: Acharya Narottam; Haracska Lajos; Johnson Robert E; Unk Ildiko; Prakash Satya; Prakash Louise
Complex formation of yeast Rev1 and Rev7 proteins: a novel role for the polymerase-associated domain.
Molecular and cellular biology 2005;25(21):9734-40.
2005: Nair Deepak T; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Human DNA polymerase iota incorporates dCTP opposite template G via a G.C + Hoogsteen base pair.
Structure (London, England : 1993) 2005;13(10):1569-77.
2005: Wolfle William T; Johnson Robert E; Minko Irina G; Lloyd R Stephen; Prakash Satya; Prakash Louise
Human DNA polymerase iota promotes replication through a ring-closed minor-groove adduct that adopts a syn conformation in DNA.
Molecular and cellular biology 2005;25(19):8748-54.
2005: Nair Deepak T; Johnson Robert E; Prakash Louise; Prakash Satya; Aggarwal Aneel K
Rev1 employs a novel mechanism of DNA synthesis using a protein template.
Science (New York, N.Y.) 2005;309(5744):2219-22.
2005: Johnson Robert E; Prakash Louise; Prakash Satya
Distinct mechanisms of cis-syn thymine dimer bypass by Dpo4 and DNA polymerase eta.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(35):12359-64.
2005: Wolfle William T; Washington M Todd; Kool Eric T; Spratt Thomas E; Helquist Sandra A; Prakash Louise; Prakash Satya
Evidence for a Watson-Crick hydrogen bonding requirement in DNA synthesis by human DNA polymerase kappa.
Molecular and cellular biology 2005;25(16):7137-43.
2005: Johnson Robert E; Prakash Louise; Prakash Satya
Biochemical evidence for the requirement of Hoogsteen base pairing for replication by human DNA polymerase iota.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(30):10466-71.
2005: Haracska Lajos; Acharya Narottam; Unk Ildiko; Johnson Robert E; Hurwitz Jerard; Prakash Louise; Prakash Satya
A single domain in human DNA polymerase iota mediates interaction with PCNA: implications for translesion DNA synthesis.
Molecular and cellular biology 2005;25(3):1183-90.
2005: Prakash Satya; Johnson Robert E; Prakash Louise
Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function.
Annual review of biochemistry 2005;74():317-53.
2004: Guzder Sami N; Torres-Ramos Carlos; Johnson Robert E; Haracska Lajos; Prakash Louise; Prakash Satya
Requirement of yeast Rad1-Rad10 nuclease for the removal of 3'-blocked termini from DNA strand breaks induced by reactive oxygen species.
Genes & development 2004;18(18):2283-91.
2004: Uljon Sacha N; Johnson Robert E; Edwards Thomas A; Prakash Satya; Prakash Louise; Aggarwal Aneel K
Crystal structure of the catalytic core of human DNA polymerase kappa.
Structure (London, England : 1993) 2004;12(8):1395-404.
2004: Washington M Todd; Minko Irina G; Johnson Robert E; Haracska Lajos; Harris Thomas M; Lloyd R Stephen; Prakash Satya; Prakash Louise
Efficient and error-free replication past a minor-groove N2-guanine adduct by the sequential action of yeast Rev1 and DNA polymerase zeta.
Molecular and cellular biology 2004;24(16):6900-6.
2004: Nair Deepak T; Johnson Robert E; Prakash Satya; Prakash Louise; Aggarwal Aneel K
Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing.
Nature 2004;430(6997):377-80.
2004: Washington M Todd; Minko Irina G; Johnson Robert E; Wolfle William T; Harris Thomas M; Lloyd R Stephen; Prakash Satya; Prakash Louise
Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa.
Molecular and cellular biology 2004;24(13):5687-93.
2004: Haracska Lajos; Torres-Ramos Carlos A; Johnson Robert E; Prakash Satya; Prakash Louise
Opposing effects of ubiquitin conjugation and SUMO modification of PCNA on replicational bypass of DNA lesions in Saccharomyces cerevisiae.
Molecular and cellular biology 2004;24(10):4267-74.
2004: Trincao Jose; Johnson Robert E; Wolfle William T; Escalante Carlos R; Prakash Satya; Prakash Louise; Aggarwal Aneel K
Dpo4 is hindered in extending a G.T mismatch by a reverse wobble.
Nature structural & molecular biology 2004;11(5):457-62.
2004: Washington M Todd; Johnson Robert E; Prakash Louise; Prakash Satya
Human DNA polymerase iota utilizes different nucleotide incorporation mechanisms dependent upon the template base.
Molecular and cellular biology 2004;24(2):936-43.
2003: Haracska Lajos; Prakash Louise; Prakash Satya
A mechanism for the exclusion of low-fidelity human Y-family DNA polymerases from base excision repair.
Genes & development 2003;17(22):2777-85.
2003: Washington M Todd; Johnson Robert E; Prakash Louise; Prakash Satya
The mechanism of nucleotide incorporation by human DNA polymerase eta differs from that of the yeast enzyme.
Molecular and cellular biology 2003;23(22):8316-22.
2003: Washington M Todd; Prakash Louise; Prakash Satya
Mechanism of nucleotide incorporation opposite a thymine-thymine dimer by yeast DNA polymerase eta.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(21):12093-8.
2003: Wolfle William T; Washington M Todd; Prakash Louise; Prakash Satya
Human DNA polymerase kappa uses template-primer misalignment as a novel means for extending mispaired termini and for generating single-base deletions.
Genes & development 2003;17(17):2191-9.
2003: Washington M Todd; Helquist Sandra A; Kool Eric T; Prakash Louise; Prakash Satya
Requirement of Watson-Crick hydrogen bonding for DNA synthesis by yeast DNA polymerase eta.
Molecular and cellular biology 2003;23(14):5107-12.
2003: Washington M Todd; Wolfle William T; Spratt Thomas E; Prakash Louise; Prakash Satya
Yeast DNA polymerase eta makes functional contacts with the DNA minor groove only at the incoming nucleoside triphosphate.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(9):5113-8.
2003: Johnson Robert E; Trincao José; Aggarwal Aneel K; Prakash Satya; Prakash Louise
Deoxynucleotide triphosphate binding mode conserved in Y family DNA polymerases.
Molecular and cellular biology 2003;23(8):3008-12.
2003: Haracska Lajos; Prakash Satya; Prakash Louise
Yeast DNA polymerase zeta is an efficient extender of primer ends opposite from 7,8-dihydro-8-Oxoguanine and O6-methylguanine.
Molecular and cellular biology 2003;23(4):1453-9.
2003: Johnson Robert E; Yu Sung-Lim; Prakash Satya; Prakash Louise
Yeast DNA polymerase zeta (zeta) is essential for error-free replication past thymine glycol.
Genes & development 2003;17(1):77-87.
2003: Yu Sung-Lim; Lee Sung-Keun; Johnson Robert E; Prakash Louise; Prakash Satya
The stalling of transcription at abasic sites is highly mutagenic.
Molecular and cellular biology 2003;23(1):382-8.
2003: Minko Irina G; Washington M Todd; Kanuri Manorama; Prakash Louise; Prakash Satya; Lloyd R Stephen
Translesion synthesis past acrolein-derived DNA adduct, gamma -hydroxypropanodeoxyguanosine, by yeast and human DNA polymerase eta.
The Journal of biological chemistry 2003;278(2):784-90.
2002: Haracska Lajos; Prakash Louise; Prakash Satya
Role of human DNA polymerase kappa as an extender in translesion synthesis.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(25):16000-5.
2002: Unk Ildiko; Haracska Lajos; Gomes Xavier V; Burgers Peter M J; Prakash Louise; Prakash Satya
Stimulation of 3'-->5' exonuclease and 3'-phosphodiesterase activities of yeast apn2 by proliferating cell nuclear antigen.
Molecular and cellular biology 2002;22(18):6480-6.
2002: Prakash Satya; Prakash Louise
Translesion DNA synthesis in eukaryotes: a one- or two-polymerase affair.
Genes & development 2002;16(15):1872-83.
2002: Lee Sung-Keun; Yu Sung-Lim; Prakash Louise; Prakash Satya
Requirement of yeast RAD2, a homolog of human XPG gene, for efficient RNA polymerase II transcription. implications for Cockayne syndrome.
Cell 2002;109(7):823-34.
2002: Lee Sung-Keun; Yu Sung-Lim; Prakash Louise; Prakash Satya
Yeast RAD26, a homolog of the human CSB gene, functions independently of nucleotide excision repair and base excision repair in promoting transcription through damaged bases.
Molecular and cellular biology 2002;22(12):4383-9.
2002: Haracska Lajos; Prakash Satya; Prakash Louise
Yeast Rev1 protein is a G template-specific DNA polymerase.
The Journal of biological chemistry 2002;277(18):15546-51.
2002: Torres-Ramos Carlos A; Prakash Satya; Prakash Louise
Requirement of RAD5 and MMS2 for postreplication repair of UV-damaged DNA in Saccharomyces cerevisiae.
Molecular and cellular biology 2002;22(7):2419-26.
2002: Washington M Todd; Johnson Robert E; Prakash Louise; Prakash Satya
Human DINB1-encoded DNA polymerase kappa is a promiscuous extender of mispaired primer termini.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(4):1910-4.
2002: Haracska Lajos; Unk Ildiko; Johnson Robert E; Phillips Barbara B; Hurwitz Jerard; Prakash Louise; Prakash Satya
Stimulation of DNA synthesis activity of human DNA polymerase kappa by PCNA.
Molecular and cellular biology 2002;22(3):784-91.
2001: Washington M T; Prakash L; Prakash S
Yeast DNA polymerase eta utilizes an induced-fit mechanism of nucleotide incorporation.
Cell 2001;107(7):917-27.
2001: Haracska L; Johnson R E; Unk I; Phillips B B; Hurwitz J; Prakash L; Prakash S
Targeting of human DNA polymerase iota to the replication machinery via interaction with PCNA.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(25):14256-61.
2001: Lee S K; Yu S L; Prakash L; Prakash S
Requirement for yeast RAD26, a homolog of the human CSB gene, in elongation by RNA polymerase II.
Molecular and cellular biology 2001;21(24):8651-6.
2001: Haracska L; Johnson R E; Unk I; Phillips B; Hurwitz J; Prakash L; Prakash S
Physical and functional interactions of human DNA polymerase eta with PCNA.
Molecular and cellular biology 2001;21(21):7199-206.
2001: Madril A C; Johnson R E; Washington M T; Prakash L; Prakash S
Fidelity and damage bypass ability of Schizosaccharomyces pombe Eso1 protein, comprised of DNA polymerase eta and sister chromatid cohesion protein Ctf7.
The Journal of biological chemistry 2001;276(46):42857-62.
2001: Trincao J; Johnson R E; Escalante C R; Prakash S; Prakash L; Aggarwal A K
Structure of the catalytic core of S. cerevisiae DNA polymerase eta: implications for translesion DNA synthesis.
Molecular cell 2001;8(2):417-26.
2001: Haracska L; Kondratick C M; Unk I; Prakash S; Prakash L
Interaction with PCNA is essential for yeast DNA polymerase eta function.
Molecular cell 2001;8(2):407-15.
2001: Washington M T; Johnson R E; Prakash L; Prakash S
Accuracy of lesion bypass by yeast and human DNA polymerase eta.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(15):8355-60.
2001: Johnson R E; Haracska L; Prakash S; Prakash L
Role of DNA polymerase zeta in the bypass of a (6-4) TT photoproduct.
Molecular and cellular biology 2001;21(10):3558-63.
2001: Haracska L; Unk I; Johnson R E; Johansson E; Burgers P M; Prakash S; Prakash L
Roles of yeast DNA polymerases delta and zeta and of Rev1 in the bypass of abasic sites.
Genes & development 2001;15(8):945-54.
2001: Kondratick C M; Washington M T; Prakash S; Prakash L
Acidic residues critical for the activity and biological function of yeast DNA polymerase eta.
Molecular and cellular biology 2001;21(6):2018-25.
2001: Unk I; Haracska L; Prakash S; Prakash L
3'-phosphodiesterase and 3'-->5' exonuclease activities of yeast Apn2 protein and requirement of these activities for repair of oxidative DNA damage.
Molecular and cellular biology 2001;21(5):1656-61.
2001: Haracska L; Washington M T; Prakash S; Prakash L
Inefficient bypass of an abasic site by DNA polymerase eta.
The Journal of biological chemistry 2001;276(9):6861-6.
2001: Yu S L; Johnson R E; Prakash S; Prakash L
Requirement of DNA polymerase eta for error-free bypass of UV-induced CC and TC photoproducts.
Molecular and cellular biology 2001;21(1):185-8.
2001: Minko I G; Washington M T; Prakash L; Prakash S; Lloyd R S
Translesion DNA synthesis by yeast DNA polymerase eta on templates containing N2-guanine adducts of 1,3-butadiene metabolites.
The Journal of biological chemistry 2001;276(4):2517-22.
2001: Washington M T; Johnson R E; Prakash S; Prakash L
Mismatch extension ability of yeast and human DNA polymerase eta.
The Journal of biological chemistry 2001;276(3):2263-6.
2000: Haracska L; Prakash S; Prakash L
Replication past O(6)-methylguanine by yeast and human DNA polymerase eta.
Molecular and cellular biology 2000;20(21):8001-7.
2000: Johnson R E; Washington M T; Haracska L; Prakash S; Prakash L
Eukaryotic polymerases iota and zeta act sequentially to bypass DNA lesions.
Nature 2000;406(6799):1015-9.
2000: Haracska L; Yu S L; Johnson R E; Prakash L; Prakash S
Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase eta.
Nature genetics 2000;25(4):458-61.
2000: Unk I; Haracska L; Johnson R E; Prakash S; Prakash L
Apurinic endonuclease activity of yeast Apn2 protein.
The Journal of biological chemistry 2000;275(29):22427-34.
2000: Prakash S; Prakash L
Nucleotide excision repair in yeast.
Mutation research 2000;451(1-2):13-24.
2000: Torres-Ramos C A; Johnson R E; Prakash L; Prakash S
Evidence for the involvement of nucleotide excision repair in the removal of abasic sites in yeast.
Molecular and cellular biology 2000;20(10):3522-8.
2000: Johnson R E; Prakash S; Prakash L
The human DINB1 gene encodes the DNA polymerase Poltheta.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(8):3838-43.
2000: Washington M T; Johnson R E; Prakash S; Prakash L
Accuracy of thymine-thymine dimer bypass by Saccharomyces cerevisiae DNA polymerase eta.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(7):3094-9.
2000: Johnson R E; Washington M T; Prakash S; Prakash L
Fidelity of human DNA polymerase eta.
The Journal of biological chemistry 2000;275(11):7447-50.
2000: Prakash S; Johnson R E; Washington M T; Haracska L; Kondratick C M; Prakash L
Role of yeast and human DNA polymerase eta in error-free replication of damaged DNA.
Cold Spring Harbor symposia on quantitative biology 2000;65():51-9.
1999: Washington M T; Johnson R E; Prakash S; Prakash L
Fidelity and processivity of Saccharomyces cerevisiae DNA polymerase eta.
The Journal of biological chemistry 1999;274(52):36835-8.
1999: Lee S K; Johnson R E; Yu S L; Prakash L; Prakash S
Requirement of yeast SGS1 and SRS2 genes for replication and transcription.
Science (New York, N.Y.) 1999;286(5448):2339-42.
1999: Guzder S N; Sung P; Prakash L; Prakash S
Synergistic interaction between yeast nucleotide excision repair factors NEF2 and NEF4 in the binding of ultraviolet-damaged DNA.
The Journal of biological chemistry 1999;274(34):24257-62.
1999: Johnson R E; Kondratick C M; Prakash S; Prakash L
hRAD30 mutations in the variant form of xeroderma pigmentosum.
Science (New York, N.Y.) 1999;285(5425):263-5.
1999: Johnson R E; Prakash S; Prakash L
Requirement of DNA polymerase activity of yeast Rad30 protein for its biological function.
The Journal of biological chemistry 1999;274(23):15975-7.
1999: Johnson R E; Prakash S; Prakash L
Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, Poleta.
Science (New York, N.Y.) 1999;283(5404):1001-4.
1998: Guzder S N; Sung P; Prakash L; Prakash S
Affinity of yeast nucleotide excision repair factor 2, consisting of the Rad4 and Rad23 proteins, for ultraviolet damaged DNA.
The Journal of biological chemistry 1998;273(47):31541-6.
1998: Johnson R E; Torres-Ramos C A; Izumi T; Mitra S; Prakash S; Prakash L
Identification of APN2, the Saccharomyces cerevisiae homolog of the major human AP endonuclease HAP1, and its role in the repair of abasic sites.
Genes & development 1998;12(19):3137-43.
1998: Johnson R E; Kovvali G K; Prakash L; Prakash S
Role of yeast Rth1 nuclease and its homologs in mutation avoidance, DNA repair, and DNA replication.
Current genetics 1998;34(1):21-9.
1998: Habraken Y; Sung P; Prakash L; Prakash S
ATP-dependent assembly of a ternary complex consisting of a DNA mismatch and the yeast MSH2-MSH6 and MLH1-PMS1 protein complexes.
The Journal of biological chemistry 1998;273(16):9837-41.
1998: Guzder S N; Sung P; Prakash L; Prakash S
The DNA-dependent ATPase activity of yeast nucleotide excision repair factor 4 and its role in DNA damage recognition.
The Journal of biological chemistry 1998;273(11):6292-6.
1997: Habraken Y; Sung P; Prakash L; Prakash S
Enhancement of MSH2-MSH3-mediated mismatch recognition by the yeast MLH1-PMS1 complex.
Current biology : CB 1997;7(10):790-3.
1997: Torres-Ramos C A; Prakash S; Prakash L
Requirement of yeast DNA polymerase delta in post-replicational repair of UV-damaged DNA.
The Journal of biological chemistry 1997;272(41):25445-8.
1997: Bailly V; Lauder S; Prakash S; Prakash L
Yeast DNA repair proteins Rad6 and Rad18 form a heterodimer that has ubiquitin conjugating, DNA binding, and ATP hydrolytic activities.
The Journal of biological chemistry 1997;272(37):23360-5.
1997: Guzder S N; Sung P; Prakash L; Prakash S
Yeast Rad7-Rad16 complex, specific for the nucleotide excision repair of the nontranscribed DNA strand, is an ATP-dependent DNA damage sensor.
The Journal of biological chemistry 1997;272(35):21665-8.
1997: Bailly V; Prakash S; Prakash L
Domains required for dimerization of yeast Rad6 ubiquitin-conjugating enzyme and Rad18 DNA binding protein.
Molecular and cellular biology 1997;17(8):4536-43.
1996: Lauder S; Bankmann M; Guzder S N; Sung P; Prakash L; Prakash S
Dual requirement for the yeast MMS19 gene in DNA repair and RNA polymerase II transcription.
Molecular and cellular biology 1996;16(12):6783-93.
1996: Johnson R E; Kovvali G K; Guzder S N; Amin N S; Holm C; Habraken Y; Sung P; Prakash L; Prakash S
Evidence for involvement of yeast proliferating cell nuclear antigen in DNA mismatch repair.
The Journal of biological chemistry 1996;271(45):27987-90.
1996: Habraken Y; Sung P; Prakash S; Prakash L
Transcription factor TFIIH and DNA endonuclease Rad2 constitute yeast nucleotide excision repair factor 3: implications for nucleotide excision repair and Cockayne syndrome.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(20):10718-22.
1996: Habraken Y; Sung P; Prakash L; Prakash S
Binding of insertion/deletion DNA mismatches by the heterodimer of yeast mismatch repair proteins MSH2 and MSH3.
Current biology : CB 1996;6(9):1185-7.
1996: Torres-Ramos C A; Yoder B L; Burgers P M; Prakash S; Prakash L
Requirement of proliferating cell nuclear antigen in RAD6-dependent postreplicational DNA repair.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(18):9676-81.
1996: Guzder S N; Habraken Y; Sung P; Prakash L; Prakash S
RAD26, the yeast homolog of human Cockayne's syndrome group B gene, encodes a DNA-dependent ATPase.
The Journal of biological chemistry 1996;271(31):18314-7.
1996: Burns J L; Guzder S N; Sung P; Prakash S; Prakash L
An affinity of human replication protein A for ultraviolet-damaged DNA.
The Journal of biological chemistry 1996;271(20):11607-10.
1996: Sung P; Guzder S N; Prakash L; Prakash S
Reconstitution of TFIIH and requirement of its DNA helicase subunits, Rad3 and Rad25, in the incision step of nucleotide excision repair.
The Journal of biological chemistry 1996;271(18):10821-6.
1996: Guzder S N; Sung P; Prakash L; Prakash S
Nucleotide excision repair in yeast is mediated by sequential assembly of repair factors and not by a pre-assembled repairosome.
The Journal of biological chemistry 1996;271(15):8903-10.
1996: Saparbaev M; Prakash L; Prakash S
Requirement of mismatch repair genes MSH2 and MSH3 in the RAD1-RAD10 pathway of mitotic recombination in Saccharomyces cerevisiae.
Genetics 1996;142(3):727-36.
1996: Johnson R E; Kovvali G K; Prakash L; Prakash S
Requirement of the yeast MSH3 and MSH6 genes for MSH2-dependent genomic stability.
The Journal of biological chemistry 1996;271(13):7285-8.
1995: Habraken Y; Sung P; Prakash L; Prakash S
Structure-specific nuclease activity in yeast nucleotide excision repair protein Rad2.
The Journal of biological chemistry 1995;270(50):30194-8.
1995: Guzder S N; Sung P; Prakash S; Prakash L
Lethality in yeast of trichothiodystrophy (TTD) mutations in the human xeroderma pigmentosum group D gene. Implications for transcriptional defect in TTD.
The Journal of biological chemistry 1995;270(30):17660-3.
1995: Johnson R E; Kovvali G K; Prakash L; Prakash S
Requirement of the yeast RTH1 5' to 3' exonuclease for the stability of simple repetitive DNA.
Science (New York, N.Y.) 1995;269(5221):238-40.
1995: Guzder S N; Habraken Y; Sung P; Prakash L; Prakash S
Reconstitution of yeast nucleotide excision repair with purified Rad proteins, replication protein A, and transcription factor TFIIH.
The Journal of biological chemistry 1995;270(22):12973-6.
1995: Guzder S N; Bailly V; Sung P; Prakash L; Prakash S
Yeast DNA repair protein RAD23 promotes complex formation between transcription factor TFIIH and DNA damage recognition factor RAD14.
The Journal of biological chemistry 1995;270(15):8385-8.
1995: Sommers C H; Miller E J; Dujon B; Prakash S; Prakash L
Conditional lethality of null mutations in RTH1 that encodes the yeast counterpart of a mammalian 5'- to 3'-exonuclease required for lagging strand DNA synthesis in reconstituted systems.
The Journal of biological chemistry 1995;270(9):4193-6.
1994: Habraken Y; Sung P; Prakash L; Prakash S
A conserved 5' to 3' exonuclease activity in the yeast and human nucleotide excision repair proteins RAD2 and XPG.
The Journal of biological chemistry 1994;269(50):31342-5.
1994: Johnson R E; Prakash S; Prakash L
Yeast DNA repair protein RAD5 that promotes instability of simple repetitive sequences is a DNA-dependent ATPase.
The Journal of biological chemistry 1994;269(45):28259-62.
1994: Habraken Y; Sung P; Prakash L; Prakash S
Holliday junction cleavage by yeast Rad1 protein.
Nature 1994;371(6497):531-4.
1994: Habraken Y; Sung P; Prakash L; Prakash S
Human xeroderma pigmentosum group G gene encodes a DNA endonuclease.
Nucleic acids research 1994;22(16):3312-6.
1994: Guzder S N; Sung P; Bailly V; Prakash L; Prakash S
RAD25 is a DNA helicase required for DNA repair and RNA polymerase II transcription.
Nature 1994;369(6481):578-81.
1994: Bailly V; Lamb J; Sung P; Prakash S; Prakash L
Specific complex formation between yeast RAD6 and RAD18 proteins: a potential mechanism for targeting RAD6 ubiquitin-conjugating activity to DNA damage sites.
Genes & development 1994;8(7):811-20.
1994: Sung P; Watkins J F; Prakash L; Prakash S
Negative superhelicity promotes ATP-dependent binding of yeast RAD3 protein to ultraviolet-damaged DNA.
The Journal of biological chemistry 1994;269(11):8303-8.
1994: Guzder S N; Qiu H; Sommers C H; Sung P; Prakash L; Prakash S
DNA repair gene RAD3 of S. cerevisiae is essential for transcription by RNA polymerase II.
Nature 1994;367(6458):91-4.
1993: Sung P; Reynolds P; Prakash L; Prakash S
Purification and characterization of the Saccharomyces cerevisiae RAD1/RAD10 endonuclease.
The Journal of biological chemistry 1993;268(35):26391-9.
1993: Watkins J F; Sung P; Prakash L; Prakash S
The Saccharomyces cerevisiae DNA repair gene RAD23 encodes a nuclear protein containing a ubiquitin-like domain required for biological function.
Molecular and cellular biology 1993;13(12):7757-65.
1993: Habraken Y; Sung P; Prakash L; Prakash S
Yeast excision repair gene RAD2 encodes a single-stranded DNA endonuclease.
Nature 1993;366(6453):365-8.
1993: Qiu H; Park E; Prakash L; Prakash S
The Saccharomyces cerevisiae DNA repair gene RAD25 is required for transcription by RNA polymerase II.
Genes & development 1993;7(11):2161-71.
1993: Sung P; Bailly V; Weber C; Thompson L H; Prakash L; Prakash S
Human xeroderma pigmentosum group D gene encodes a DNA helicase.
Nature 1993;365(6449):852-5.
1993: Guzder S N; Sung P; Prakash L; Prakash S
Yeast DNA-repair gene RAD14 encodes a zinc metalloprotein with affinity for ultraviolet-damaged DNA.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(12):5433-7.
1993: Watkins J F; Sung P; Prakash S; Prakash L
The extremely conserved amino terminus of RAD6 ubiquitin-conjugating enzyme is essential for amino-end rule-dependent protein degradation.
Genes & development 1993;7(2):250-61.
1992: Park E; Guzder S N; Koken M H; Jaspers-Dekker I; Weeda G; Hoeijmakers J H; Prakash S; Prakash L
RAD25 (SSL2), the yeast homolog of the human xeroderma pigmentosum group B DNA repair gene, is essential for viability.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(23):11416-20.
1992: Bailly V; Sommers C H; Sung P; Prakash L; Prakash S
Specific complex formation between proteins encoded by the yeast DNA repair and recombination genes RAD1 and RAD10.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(17):8273-7.
1992: Johnson R E; Henderson S T; Petes T D; Prakash S; Bankmann M; Prakash L
Saccharomyces cerevisiae RAD5-encoded DNA repair protein contains DNA helicase and zinc-binding sequence motifs and affects the stability of simple repetitive sequences in the genome.
Molecular and cellular biology 1992;12(9):3807-18.
1992: Reynolds P R; Biggar S; Prakash L; Prakash S
The Schizosaccharomyces pombe rhp3+ gene required for DNA repair and cell viability is functionally interchangeable with the RAD3 gene of Saccharomyces cerevisiae.
Nucleic acids research 1992;20(9):2327-34.
1992: Sung P; Prakash L; Prakash S
Renaturation of DNA catalysed by yeast DNA repair and recombination protein RAD10.
Nature 1992;355(6362):743-5.
1992: Bankmann M; Prakash L; Prakash S
Yeast RAD14 and human xeroderma pigmentosum group A DNA-repair genes encode homologous proteins.
Nature 1992;355(6360):555-8.
1991: Bailly V; Sung P; Prakash L; Prakash S
DNA.RNA helicase activity of RAD3 protein of Saccharomyces cerevisiae.
Proceedings of the National Academy of Sciences of the United States of America 1991;88(21):9712-6.
1991: Koken M H; Reynolds P; Jaspers-Dekker I; Prakash L; Prakash S; Bootsma D; Hoeijmakers J H
Structural and functional conservation of two human homologs of the yeast DNA repair gene RAD6.
Proceedings of the National Academy of Sciences of the United States of America 1991;88(20):8865-9.
1991: Sung P; Prakash S; Prakash L
Stable ester conjugate between the Saccharomyces cerevisiae RAD6 protein and ubiquitin has no biological activity.
Journal of molecular biology 1991;221(3):745-9.
1991: Sung P; Berleth E; Pickart C; Prakash S; Prakash L
Yeast RAD6 encoded ubiquitin conjugating enzyme mediates protein degradation dependent on the N-end-recognizing E3 enzyme.
The EMBO journal 1991;10(8):2187-93.
1991: Koken M; Reynolds P; Bootsma D; Hoeijmakers J; Prakash S; Prakash L
Dhr6, a Drosophila homolog of the yeast DNA-repair gene RAD6.
Proceedings of the National Academy of Sciences of the United States of America 1991;88(9):3832-6.
1990: Madura K; Prakash S
Transcript levels of the Saccharomyes cerevisiae DNA repair gene RAD23 increase in response to UV light and in meiosis but remain constant in the mitotic cell cycle.
Nucleic acids research 1990;18(16):4737-42.
1990: Jones J S; Prakash L; Prakash S
Regulated expression of the Saccharomyces cerevisiae DNA repair gene RAD7 in response to DNA damage and during sporulation.
Nucleic acids research 1990;18(11):3281-5.
1990: Madura K; Prakash S
The Saccharomyces cerevisiae DNA repair gene RAD2 is regulated in meiosis but not during the mitotic cell cycle.
Molecular and cellular biology 1990;10(6):3256-7.
1990: Schiestl R H; Prakash S
RAD10, an excision repair gene of Saccharomyces cerevisiae, is involved in the RAD1 pathway of mitotic recombination.
Molecular and cellular biology 1990;10(6):2485-91.
1990: Reynolds P; Koken M H; Hoeijmakers J H; Prakash S; Prakash L
The rhp6+ gene of Schizosaccharomyces pombe: a structural and functional homolog of the RAD6 gene from the distantly related yeast Saccharomyces cerevisiae.
The EMBO journal 1990;9(5):1423-30.
1990: Schiestl R H; Prakash S; Prakash L
The SRS2 suppressor of rad6 mutations of Saccharomyces cerevisiae acts by channeling DNA lesions into the RAD52 DNA repair pathway.
Genetics 1990;124(4):817-31.
1990: Sung P; Prakash S; Prakash L
Mutation of cysteine-88 in the Saccharomyces cerevisiae RAD6 protein abolishes its ubiquitin-conjugating activity and its various biological functions.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(7):2695-9.
1990: Madura K; Prakash S; Prakash L
Expression of the Saccharomyces cerevisiae DNA repair gene RAD6 that encodes a ubiquitin conjugating enzyme, increases in response to DNA damage and in meiosis but remains constant during the mitotic cell cycle.
Nucleic acids research 1990;18(4):771-8.
1989: Schiestl R H; Prakash S
Interactions of the RAD7 and RAD23 excision repair genes of Saccharomyces cerevisiae with DNA repair genes in different epistasis groups.
Current genetics 1989;16(4):219-23.
1989: Schiestl R H; Reynolds P; Prakash S; Prakash L
Cloning and sequence analysis of the Saccharomyces cerevisiae RAD9 gene and further evidence that its product is required for cell cycle arrest induced by DNA damage.
Molecular and cellular biology 1989;9(5):1882-96.
1989: van Duin M; van Den Tol J; Hoeijmakers J H; Bootsma D; Rupp I P; Reynolds P; Prakash L; Prakash S
Conserved pattern of antisense overlapping transcription in the homologous human ERCC-1 and yeast RAD10 DNA repair gene regions.
Molecular and cellular biology 1989;9(4):1794-8.
1988: Sung P; Prakash S; Prakash L
The RAD6 protein of Saccharomyces cerevisiae polyubiquitinates histones, and its acidic domain mediates this activity.
Genes & development 1988;2(11):1476-85.
1988: Sung P; Higgins D; Prakash L; Prakash S
Mutation of lysine-48 to arginine in the yeast RAD3 protein abolishes its ATPase and DNA helicase activities but not the ability to bind ATP.
The EMBO journal 1988;7(10):3263-9.
1988: Schiestl R H; Prakash S
RAD1, an excision repair gene of Saccharomyces cerevisiae, is also involved in recombination.
Molecular and cellular biology 1988;8(9):3619-26.
1987: Sung P; Prakash L; Matson S W; Prakash S
RAD3 protein of Saccharomyces cerevisiae is a DNA helicase.
Proceedings of the National Academy of Sciences of the United States of America 1987;84(24):8951-5.

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