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Alexei Protopopov

Research Profile

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Lixing Yang; Chengsheng Zhang; Alexei Protopopov; Xiaojia Ren; Ruibin Xi; Lynda Chin; Nils Gehlenborg; Psalm S Haseley; Chih-Heng Hsieh; Raju Kucherlapati; Charles Lee; Lovelace J Luquette; Peter J Park
Diverse mechanisms of somatic structural variations in human cancer genomes.
Tatianna C Larman; Alexei Protopopov; Christine E Seidman; Lynda Chin; Steven R Depalma; Stacey B Gabriel; Angela G Hadjipanayis; Raju Kucherlapati; Jianhua Zhang; Jonathan G Seidman
Spectrum of somatic mitochondrial mutations in five cancers.
Zhihu Ding; Boyi Gan; James W Horner; Jian Hu; Elena Ivanova; Mariela Jaskelioff; Shan Jiang; Maria Kost-Alimova; Emma S Labrot; Liren Li; Xin Lu; Samuel R Perry; Alexei Protopopov; Guocan Wang; Wei Wang; Y Alan Wang; Chang-Jiun Wu; Yonghong Xiao; Hailei Zhang; Jianhua Zhang; Jingfang Zhang; Lynda Chin; Gerald Chu; Ronald A DePinho
Telomerase reactivation following telomere dysfunction yields murine prostate tumors with bone metastases.

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All Publications

2013: Lixing Yang; Chengsheng Zhang; Alexei Protopopov; Xiaojia Ren; Ruibin Xi; Lynda Chin; Nils Gehlenborg; Psalm S Haseley; Chih-Heng Hsieh; Raju Kucherlapati; Charles Lee; Lovelace J Luquette; Peter J Park
Diverse mechanisms of somatic structural variations in human cancer genomes.
Cell 2013;153(4):919-29.
2012: Tatianna C Larman; Alexei Protopopov; Christine E Seidman; Lynda Chin; Steven R Depalma; Stacey B Gabriel; Angela G Hadjipanayis; Raju Kucherlapati; Jianhua Zhang; Jonathan G Seidman
Spectrum of somatic mitochondrial mutations in five cancers.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(35):14087-91.
2012: Zhihu Ding; Boyi Gan; James W Horner; Jian Hu; Elena Ivanova; Mariela Jaskelioff; Shan Jiang; Maria Kost-Alimova; Emma S Labrot; Liren Li; Xin Lu; Samuel R Perry; Alexei Protopopov; Guocan Wang; Wei Wang; Y Alan Wang; Chang-Jiun Wu; Yonghong Xiao; Hailei Zhang; Jianhua Zhang; Jingfang Zhang; Lynda Chin; Gerald Chu; Ronald A DePinho
Telomerase reactivation following telomere dysfunction yields murine prostate tumors with bone metastases.
Cell 2012;148(5):896-907.
2012: Reo Maruyama; Yuri Nikolsky; Marina Bessarabova; Sibgat Choudhury; Alex Ishkin; X Shirley Liu; Pang-Kuo Lo; Alexei Protopopov; Michail Shipitsin; Saraswati Sukumar; Zhenhua Wu; Jun Yao; Kornelia Polyak
Altered antisense-to-sense transcript ratios in breast cancer.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(8):2820-4.
2012: Jian Hu; Soyoon Sarah Hwang; Elena Ivanova; Mariela Jaskelioff; Shawn Johnson; Maria Kost-Alimova; Marc Liesa; Alexei Protopopov; Ergun Sahin; Orian S Shirihai; Yaoqi Alan Wang; Haoqiang Ying; Hailei Zhang; Adam T Boutin; Lynda Chin; Zhihu Ding; Boyi Gan; Ronald A DePinho
Antitelomerase therapy provokes ALT and mitochondrial adaptive mechanisms in cancer.
Cell 2012;148(4):651-63.
2012: Karen Crasta; Regina Dagher; Neil J Ganem; Elena V Ivanova; Alexandra B Lantermann; Luigi Nezi; Yunfeng Pan; Dipanjan Chowdhury; Alexei Protopopov; David Pellman
DNA breaks and chromosome pulverization from errors in mitosis.
Nature 2012;482(7383):53-8.
2011: Alejandro Gutierrez; Linda Holmfeldt; Stephen P Hunger; Alex Kentsis; Frederick W Alt; Shann-Ching Chen; Lynda Chin; Suzanne E Dahlberg; James R Downing; Charles G Mullighan; Donna Neuberg; Alexei Protopopov; Stephen E Sallan; Takaomi Sanda; Lewis B Silverman; Stuart S Winter; Shan Zha; Jianhua Zhang; A Thomas Look
The BCL11B tumor suppressor is mutated across the major molecular subtypes of T-cell acute lymphoblastic leukemia.
Blood 2011;118(15):4169-73.
2011: Haoqiang Ying; Hailei Zhang; Hongwu Zheng; Stephanie M Zimmerman; Nabeel Bardeesy; Lynda Chin; Gerald Chu; Simona Colla; Kutlu G Elpek; Eliot Fletcher-Sananikone; Aram F Hezel; Shan Jiang; Alec C Kimmelman; Carol Lim; Yingchun Liu; Brian Malinn; Ji-Hye Paik; Samuel R Perry; Alexei Protopopov; Xiaojia Ren; Sarah P Thayer; Shannon J Turley; Anant Vinjamoori; Wei Wang; Y Alan Wang; Yonghong Xiao; Haiyan Yan; Ronald A DePinho
PTEN is a major tumor suppressor in pancreatic ductal adenocarcinoma and regulates an NF-κB-cytokine network.
Cancer discovery 2011;1(2):158-69.
2011: Ergün Sahin; Simona Colla; Marc Liesa; Javid Moslehi; Florian L Müller; Mira Guo; Marcus Cooper; Darrell Kotton; Attila J Fabian; Carl Walkey; richard s maser; Giovanni Tonon; Friedrich Foerster; Robert Xiong; Y Alan Wang; Sachet A Shukla; Mariela Jaskelioff; Eric S Martin; Timothy P Heffernan; Alexei Protopopov; Elena Ivanova; John E Mahoney; Maria Kost-Alimova; Samuel R Perry; Roderick Bronson; Ronglih Liao; Richard Mulligan; Orian S Shirihai; Lynda Chin; Ronald A DePinho
Telomere dysfunction induces metabolic and mitochondrial compromise.
Nature 2011;470(7334):359-65.
2010: Alexander H Stegh; Cameron Brennan; John A Mahoney; Kristin L Forloney; Harry T Jenq; Janina P Luciano; Alexei Protopopov; Lynda Chin; Ronald A DePinho
Glioma oncoprotein Bcl2L12 inhibits the p53 tumor suppressor.
Genes & development 2010;24(19):2194-204.
2010: Alejandro Gutierrez; Suzanne E Dahlberg; Donna S Neuberg; Jianhua Zhang; Ruta Grebliunaite; Takaomi Sanda; Alexei Protopopov; Valeria Tosello; Jeffery L Kutok; Richard Larson; Michael J Borowitz; Mignon L Loh; Adolfo Ferrando; Stuart S Winter; Charles G Mullighan; Lewis B Silverman; Lynda Chin; Stephen P Hunger; Stephen E Sallan; A Thomas Look
Absence of biallelic TCRgamma deletion predicts early treatment failure in pediatric T-cell acute lymphoblastic leukemia.
Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2010;28(24):3816-23.
2010: Alejandro Gutierrez; Takaomi Sanda; Wenxue Ma; Jianhua Zhang; Ruta Grebliunaite; Suzanne Dahlberg; Donna Neuberg; Alexei Protopopov; Stuart S Winter; Richard Larson; Michael J Borowitz; Lewis B Silverman; Lynda Chin; Stephen P Hunger; Catriona Jamieson; Stephen E Sallan; A Thomas Look
Inactivation of LEF1 in T-cell acute lymphoblastic leukemia.
Blood 2010;115(14):2845-51.
2009: Ji-hye Paik; Zhihu Ding; Rujuta Narurkar; Shakti Ramkissoon; Florian Muller; Walid S Kamoun; Sung-Suk Chae; Hongwu Zheng; Haoqiang Ying; Jed Mahoney; David Hiller; Shan Jiang; Alexei Protopopov; Wing H Wong; Lynda Chin; Keith L Ligon; Ronald A DePinho
FoxOs cooperatively regulate diverse pathways governing neural stem cell homeostasis.
Cell stem cell 2009;5(5):540-53.
2009: Alejandro Gutierrez; Takaomi Sanda; Ruta Grebliunaite; Arkaitz Carracedo; Leonardo Salmena; Yebin Ahn; Suzanne Dahlberg; Donna Neuberg; Lisa A Moreau; Stuart S Winter; Richard Larson; Jianhua Zhang; Alexei Protopopov; Lynda Chin; Pier Paolo Pandolfi; Lewis B Silverman; Stephen P Hunger; Stephen E Sallan; A Thomas Look
High frequency of PTEN, PI3K, and AKT abnormalities in T-cell acute lymphoblastic leukemia.
Blood 2009;114(3):647-50.
2009: Kenneth L. Scott; Omar Kabbarah; Mei-Chih Liang; Elena Ivanova; Valsamo Anagnostou; Joyce Wu; Sabin Dhakal; Min Wu; Shujuan Chen; Tamar Feinberg; Joseph Huang; Abdel Saci; Hans R Widlund; David E Fisher; Yonghong Xiao; David L Rimm; Alexei Protopopov; Kwok-Kin Wong; Lynda Chin
GOLPH3 modulates mTOR signalling and rapamycin sensitivity in cancer.
Nature 2009;459(7250):1085-90.
2009: Teru Hideshima; Dharminder Chauhan; Tanyel Kiziltepe; Hiroshi Ikeda; Yutaka Okawa; klaus podar; Noopur Raje; Alexei Protopopov; Nikhil C Munshi; Paul G Richardson; Ruben D Carrasco; Kenneth C Anderson
Biologic sequelae of I{kappa}B kinase (IKK) inhibition in multiple myeloma: therapeutic implications.
Blood 2009;113(21):5228-36.
2009: Vladimir I Kashuba; Tatiana V Pavlova; Elvira V Grigorieva; Alexey Kutsenko; Surya Pavan Yenamandra; Jingfeng Li; Fuli Wang; Alexei Protopopov; Veronika I Zabarovska; Vera Senchenko; Klas Haraldson; Tatiana Eshchenko; Julia Kobliakova; Olga Vorontsova; Igor Kuzmin; Eleonora Braga; Vladimir M Blinov; Lev L Kisselev; Yi-Xin Zeng; Ingemar Ernberg; Michael I Lerman; George Klein; Eugene R Zabarovsky
High mutability of the tumor suppressor genes RASSF1 and RBSP3 (CTDSPL) in cancer.
PloS one 2009;4(5):e5231.
2008: Alec C Kimmelman; Aram F Hezel; Andrew J Aguirre; Hongwu Zheng; Ji-Hye Paik; Haoqiang Ying; Gerald Chu; Jean X Zhang; Ergun Sahin; Giminna Yeo; Aditya Ponugoti; Roustem Nabioullin; Scott Deroo; Shenghong Yang; Xiaoxu Wang; John P McGrath; Marina Protopopova; Elena Ivanova; Jianhua Zhang; Bin Feng; Ming Tsao; Mark Redston; Alexei Protopopov; Yonghong Xiao; P Andrew Futreal; William C Hahn; David S Klimstra; Lynda Chin; Ronald A DePinho
Genomic alterations link Rho family of GTPases to the highly invasive phenotype of pancreas cancer.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(49):19372-7.
2008: Xiaoyu Li; Fotini Gounari; Alexei Protopopov; Khashayarsha Khazaie; Harald von Boehmer
Oncogenesis of T-ALL and nonmalignant consequences of overexpressing intracellular NOTCH1.
The Journal of experimental medicine 2008;205(12):2851-61.
2008: Alexander H Stegh; Santosh kesari; John E Mahoney; Harry T Jenq; Kristin L Forloney; Alexei Protopopov; David N Louis; Lynda Chin; Ronald A DePinho
Bcl2L12-mediated inhibition of effector caspase-3 and caspase-7 via distinct mechanisms in glioblastoma.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(31):10703-8.
2008: Ruprecht Wiedemeyer; Cameron Brennan; Timothy P Heffernan; Yonghong Xiao; John Mahoney; Alexei Protopopov; Hongwu Zheng; Graham Bignell; Frank B Furnari; Webster K Cavenee; William C Hahn; Koichi Ichimura; V Peter Collins; Gerald Chu; Michael R Stratton; Keith L Ligon; P Andrew Futreal; Lynda Chin
Feedback circuit among INK4 tumor suppressors constrains human glioblastoma development.
Cancer cell 2008;13(4):355-64.
2008: Samanthi A Perera; richard s maser; Huili Xia; Kate McNamara; Alexei Protopopov; Liang Chen; Aram F Hezel; Carla F. Kim; Roderick T Bronson; Diego H Castrillon; Lynda Chin; Nabeel Bardeesy; Ronald A DePinho; Kwok-Kin Wong
Telomere dysfunction promotes genome instability and metastatic potential in a K-ras p53 mouse model of lung cancer.
Carcinogenesis 2008;29(4):747-53.
2008: Alexei Protopopov; Bin Feng; Lynda Chin
Full complexity genomic hybridization on 60-mer oligonucleotide microarrays for array comparative genomic hybridization (aCGH).
Methods in molecular biology (Clifton, N.J.) 2008;439():87-100.
2007: Eric S Martin; Giovanni Tonon; Raktim Sinha; Yonghong Xiao; Bin Feng; Alec C Kimmelman; Alexei Protopopov; Elena Ivanova; Cameron Brennan; Kate Montgomery; Raju Kucherlapati; Gerald Bailey; Mark Redston; Lynda Chin; Ronald A DePinho
Common and distinct genomic events in sporadic colorectal cancer and diverse cancer types.
Cancer research 2007;67(22):10736-43.
2007: Joel Greshock; Bin Feng; Cristina Nogueira; Elena Ivanova; Ilana Perna; Katherine L Nathanson; Alexei Protopopov; Barbara L Weber; Lynda Chin
A comparison of DNA copy number profiling platforms.
Cancer research 2007;67(21):10173-80.
2007: Daniel R Carrasco; Kumar Sukhdeo; Marina Protopopova; Raktim Sinha; Miriam Enos; Daniel E Carrasco; Mei Zheng; Mala Mani; Joel Henderson; Geraldine S Pinkus; Nikhil C Munshi; James W Horner; Elena V Ivanova; Alexei Protopopov; Kenneth C Anderson; Giovanni Tonon; Ronald A DePinho
The differentiation and stress response factor XBP-1 drives multiple myeloma pathogenesis.
Cancer cell 2007;11(4):349-60.
2006: Hong Lok Lung; Arthur Kwok Leung Cheung; Dan Xie; Yue Cheng; Fung Mei Kwong; Yoshinori Murakami; Xin-Yuan Guan; Jonathan S T Sham; Daniel Chua; Alexei Protopopov; Eugene R Zabarovsky; Sai Wah Tsao; Eric J Stanbridge; Maria Li Lung
TSLC1 is a tumor suppressor gene associated with metastasis in nasopharyngeal carcinoma.
Cancer research 2006;66(19):9385-92.
2006: Hongbin Ji; Xiaojun Zhao; Yuki Yuza; Takeshi Shimamura; Danan Li; Alexei Protopopov; Boonim L Jung; Kate McNamara; Huili Xia; Karen A Glatt; Roman K Thomas; Hidefumi Sasaki; James W Horner; Michael J Eck; Albert Mitchell; Yangping Sun; Ruqayyah Al-Hashem; Roderick T Bronson; Sridhar K Rabindran; Carolyn Discafani; Elizabeth Maher; Geoffrey I Shapiro; Matthew Meyerson; Kwok-Kin Wong
Epidermal growth factor receptor variant III mutations in lung tumorigenesis and sensitivity to tyrosine kinase inhibitors.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(20):7817-22.
2006: Daniel R Carrasco; Giovanni Tonon; Yongsheng Huang; Yunyu Zhang; Raktim Sinha; Bin Feng; James P Stewart; Fenghuang Zhan; Deepak Khatry; Marina Protopopova; Alexei Protopopov; Kumar Sukhdeo; Ichiro Hanamura; Owen Stephens; Bart Barlogie; Kenneth C Anderson; Lynda Chin; John D Shaughnessy; Cameron Brennan; Ronald A DePinho
High-resolution genomic profiles define distinct clinico-pathogenetic subgroups of multiple myeloma patients.
Cancer cell 2006;9(4):313-25.
2006: Brian B Haines; Chun Jeih Ryu; Sandy Chang; Alexei Protopopov; Andreas Luch; Yun Hee Kang; Dobrin D Draganov; Maria F Fragoso; Sang Gi Paik; Hyo Jeong Hong; Ronald A DePinho; Jianzhu Chen
Block of T cell development in P53-deficient mice accelerates development of lymphomas with characteristic RAG-dependent cytogenetic alterations.
Cancer cell 2006;9(2):109-20.
2005: Elisabeth A Seftor; Kevin Brown; Lynda Chin; Dawn A Kirschmann; William W Wheaton; Alexei Protopopov; Bin Feng; yoganand balagurunathan; Jeffrey M. Trent; Brian J Nickoloff; Richard E B Seftor; Mary J C Hendrix
Epigenetic transdifferentiation of normal melanocytes by a metastatic melanoma microenvironment.
Cancer research 2005;65(22):10164-9.
2005: Johan Arnlöv; Johan Sundström; Lars Lind; Bertil Andrén; Maria Andersson; Rikard Reneland; Lars Berglund; Vladimir I Kashuba; Alexei Protopopov; Eugene R Zabarovsky; Hans Lithell
hUNC-93B1, a novel gene mainly expressed in the heart, is related to left ventricular diastolic function, heart failure morbidity and mortality in elderly men.
European journal of heart failure 2005;7(6):958-65.
2005: Hong Lok Lung; Dhinoth Kumar Bangarusamy; Dan Xie; Arthur Kwok Leung Cheung; Yue Cheng; Mande Kuppusamy Kumaran; Lance Miller; Edison Liu; Xin-Yuan Guan; Jonathan S T Sham; Yan Fang; Liqiong Li; Nancy Wang; Alexei Protopopov; Eugene R Zabarovsky; Sai Wah Tsao; Eric J Stanbridge; Maria Li Lung
THY1 is a candidate tumour suppressor gene with decreased expression in metastatic nasopharyngeal carcinoma.
Oncogene 2005;24(43):6525-32.
2005: Giovanni Tonon; Kwok-Kin Wong; Gautam Maulik; Cameron Brennan; Bin Feng; Yunyu Zhang; Deepak Khatry; Alexei Protopopov; Mingjian James You; Andrew J Aguirre; Eric S Martin; Zhaohui Yang; Hongbin Ji; Lynda Chin; Ronald A DePinho
High-resolution genomic profiles of human lung cancer.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(27):9625-30.
2005: Giovanni Tonon; Cameron Brennan; Alexei Protopopov; Gautam Maulik; Bin Feng; Yunyu Zhang; Deepak Khatry; Mingjian James You; Andrew J Aguirre; Eric S Martin; Z Yang; Hongbin Ji; Lynda Chin; Kwok-Kin Wong; Ronald A DePinho
Common and contrasting genomic profiles among the major human lung cancer subtypes.
Cold Spring Harbor symposia on quantitative biology 2005;70():11-24.
2005: Masood Ahmad Shammas; Hemanta Koley; Ramesh Babu Batchu; Robert C Bertheau; Alexei Protopopov; Nikhil C Munshi; Raj K Goyal
Telomerase inhibition by siRNA causes senescence and apoptosis in Barrett's adenocarcinoma cells: mechanism and therapeutic potential.
Molecular cancer 2005;4():24.
2004: Jingfeng Li; Fuli Wang; Klas Haraldson; Alexei Protopopov; Fuh-Mei Duh; Laura Geil; Igor Kuzmin; John D Minna; Eric J Stanbridge; Eleonora Braga; Vladimir I Kashuba; George Klein; Michael I Lerman; Eugene R Zabarovsky
Functional characterization of the candidate tumor suppressor gene NPRL2/G21 located in 3p21.3C.
Cancer research 2004;64(18):6438-43.
2004: Jingfeng Li; Fuli Wang; Alexei Protopopov; Alena Malyukova; Vladimir I Kashuba; John D Minna; Michael I Lerman; George Klein; Eugene R Zabarovsky
Inactivation of RASSF1C during in vivo tumor growth identifies it as a tumor suppressor gene.
Oncogene 2004;23(35):5941-9.
2004: Cameron Brennan; Yunyu Zhang; Christopher Leo; Bin Feng; Craig Cauwels; Andrew J Aguirre; Minjung Kim; Alexei Protopopov; Lynda Chin
High-resolution global profiling of genomic alterations with long oligonucleotide microarray.
Cancer research 2004;64(14):4744-8.
2004: Vladimir I Kashuba; Jingfeng Li; Fuli Wang; Vera Senchenko; Alexei Protopopov; Alena Malyukova; Alexey S Kutsenko; Elena Kadyrova; Veronika I Zabarovska; Olga V Muravenko; Alexander V Zelenin; Lev L Kisselev; Igor Kuzmin; John D Minna; Gösta Winberg; Ingemar Ernberg; Eleonora Braga; Michael I Lerman; George Klein; Eugene R Zabarovsky
RBSP3 (HYA22) is a tumor suppressor gene implicated in major epithelial malignancies.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(14):4906-11.
2003: Gregory David; Garth M Turner; Yao Yao; Alexei Protopopov; Ronald A DePinho
mSin3-associated protein, mSds3, is essential for pericentric heterochromatin formation and chromosome segregation in mammalian cells.
Genes & development 2003;17(19):2396-405.
2003: Eugene R Zabarovsky; Lev Petrenko; Alexei Protopopov; Olga Vorontsova; Alexey S Kutsenko; Yanyan Zhao; Gelena Kilosanidze; Veronika I Zabarovska; Elian Rakhmanaliev; Bertil Pettersson; Vladimir I Kashuba; Olle Ljungqvist; Elisabeth Norin; Tore Midtvedt; Roland Möllby; Gösta Winberg; Ingemar Ernberg
Restriction site tagged (RST) microarrays: a novel technique to study the species composition of complex microbial systems.
Nucleic acids research 2003;31(16):e95.
2003: Vera Senchenko; Jian Liu; Eleonora Braga; Natalia Mazurenko; Witaly Loginov; Yury Seryogin; Igor Bazov; Alexei Protopopov; Fjodor Kisseljov; Vladimir I Kashuba; Michael I Lerman; George Klein; Eugene R Zabarovsky
Deletion mapping using quantitative real-time PCR identifies two distinct 3p21.3 regions affected in most cervical carcinomas.
Oncogene 2003;22(19):2984-92.
2003: Alexei Protopopov; Vladimir I Kashuba; Veronika I Zabarovska; Olga V Muravenko; Michael I Lerman; George Klein; Eugene R Zabarovsky
An integrated physical and gene map of the 3.5-Mb chromosome 3p21.3 (AP20) region implicated in major human epithelial malignancies.
Cancer research 2003;63(2):404-12.
2002: Jingfeng Li; Alexei Protopopov; Fuli Wang; Vera Senchenko; Valentin Petushkov; Olga Vorontsova; Lev Petrenko; Veronika I Zabarovska; Olga V Muravenko; Eleonora Braga; Lev L Kisselev; Michael I Lerman; Vladimir I Kashuba; George Klein; Ingemar Ernberg; Claes Wahlestedt; Eugene R Zabarovsky
NotI subtraction and NotI-specific microarrays to detect copy number and methylation changes in whole genomes.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(16):10724-9.
2002: Alexey S Kutsenko; Rinat Z Gizatullin; Ali N Al-Amin; Fuli Wang; Sergei M Kvasha; Raf M Podowski; Yuri G Matushkin; Anita Gyanchandani; Olga V Muravenko; Viktor G Levitsky; Nikolay A Kolchanov; Alexei Protopopov; Vladimir I Kashuba; Lev L Kisselev; Wyeth W Wasserman; Claes Wahlestedt; Eugene R Zabarovsky
NotI flanking sequences: a tool for gene discovery and verification of the human genome.
Nucleic acids research 2002;30(14):3163-70.
2002: Alexei Protopopov; Jinfeng Li; Gösta Winberg; Rinat Z Gizatullin; Vladimir I Kashuba; George Klein; Eugene R Zabarovsky
Human cell lines engineered for tetracycline-regulated expression of tumor suppressor candidate genes from a frequently affected chromosomal region, 3p21.
The journal of gene medicine 2002;4(4):397-406.
2002: Igor Kuzmin; John W Gillespie; Alexei Protopopov; Laura Geil; Koen Dreijerink; Youfeng Yang; Cathy D Vocke; Fuh-Mei Duh; Eugene R Zabarovsky; John D Minna; Johng S Rhim; Michael R Emmert-Buck; W Marston Linehan; Michael I Lerman
The RASSF1A tumor suppressor gene is inactivated in prostate tumors and suppresses growth of prostate carcinoma cells.
Cancer research 2002;62(12):3498-502.
2002: Vladimir I Kashuba; Alexei Protopopov; Sergei M Kvasha; Rinat Z Gizatullin; Claes Wahlestedt; Lev L Kisselev; George Klein; Eugene R Zabarovsky
hUNC93B1: a novel human gene representing a new gene family and encoding an unc-93-like protein.
Gene 2002;283(1-2):209-17.
2002: Veronika I Zabarovska; Rinat Z Gizatullin; Ali N Al-Amin; Raf M Podowski; Alexei Protopopov; Sven Löfdahl; Claes Wahlestedt; Gösta Winberg; Vladimir I Kashuba; Ingemar Ernberg; Eugene R Zabarovsky
A new approach to genome mapping and sequencing: slalom libraries.
Nucleic acids research 2002;30(2):E6.
2002: GE Sulimova; Alexey S Kutsenko; Elian Rakhmanaliev; IG Udina; A A Kompaniytsev; Alexei Protopopov; E V Moisjak; Eugene Klimov; Olga V Muravenko; Alexander V Zelenin; Eleonora Braga; Vladimir I Kashuba; Eugene R Zabarovsky; Lev L Kisselev
Human chromosome 3: integration of 60 NotI clones into a physical and gene map.
Cytogenetic and genome research 2002;98(2-3):177-83.
2001: K Dreijerink; Eleonora Braga; Igor Kuzmin; Laura Geil; Fuh-Mei Duh; Debora Angeloni; Berton Zbar; Michael I Lerman; Eric J Stanbridge; John D Minna; Alexei Protopopov; J Li; Vladimir I Kashuba; George Klein; Eugene R Zabarovsky
The candidate tumor suppressor gene, RASSF1A, from human chromosome 3p21.3 is involved in kidney tumorigenesis.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(13):7504-9.
2001: Vladimir I Kashuba; Sergei M Kvasha; Alexei Protopopov; Rinat Z Gizatullin; A V Rynditch; Claes Wahlestedt; Wyeth W Wasserman; Eugene R Zabarovsky
Initial isolation and analysis of the human Kv1.7 (KCNA7) gene, a member of the voltage-gated potassium channel gene family.
Gene 2001;268(1-2):115-22.
2000: Vladimir I Kashuba; Alexei Protopopov; Raf M Podowski; Rinat Z Gizatullin; Jingfeng Li; George Klein; Claes Wahlestedt; Eugene R Zabarovsky
Isolation and chromosomal localization of a new human retinoblastoma binding protein 2 homologue 1a (RBBP2H1A).
European journal of human genetics : EJHG 2000;8(6):407-13.
2000: Eugene R Zabarovsky; Rinat Z Gizatullin; Raf M Podowski; V V Zabarovska; L Xie; Olga V Muravenko; S Kozyrev; Lev Petrenko; N Skobeleva; Jingfeng Li; Alexei Protopopov; Vladimir I Kashuba; Ingemar Ernberg; Gösta Winberg; Claes Wahlestedt
NotI clones in the analysis of the human genome.
Nucleic acids research 2000;28(7):1635-9.
2000: Olga V Muravenko; Vladimir I Kashuba; Alexey S Kutsenko; Rinat Z Gizatullin; Alexei Protopopov; Sergei M Kvasha; Ali N Al-Amin; Alexander V Zelenin; Eugene R Zabarovsky
Human HRK gene maps to position 12q13.1.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2000;8(7):656.
2000: Olga V Muravenko; Rinat Z Gizatullin; Ali N Al-Amin; Alexei Protopopov; Vladimir I Kashuba; Alexander V Zelenin; Eugene R Zabarovsky
Human ALY/BEF gene Map position 17q25.3.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2000;8(6):562.
2000: Olga V Muravenko; Rinat Z Gizatullin; Ali N Al-Amin; Alexei Protopopov; Vladimir I Kashuba; Alexander V Zelenin; Eugene R Zabarovsky
Human SS13 gene Map position 17q25.3.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2000;8(6):561.
2000: Rinat Z Gizatullin; Olga V Muravenko; Ali N Al-Amin; F Wang; Alexei Protopopov; Vladimir I Kashuba; Alexander V Zelenin; Eugene R Zabarovsky
Human NRG3 gene Map position 10q22-q23.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2000;8(6):560.
2000: Rinat Z Gizatullin; Olga V Muravenko; Ali N Al-Amin; F Wang; Alexei Protopopov; Vladimir I Kashuba; Alexander V Zelenin; E R Zabarovsk
Human COP9 subunit 8 homolog gene SGN8 Map position 2q37.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2000;8(6):559.
2000: Olga V Muravenko; Rinat Z Gizatullin; Alexei Protopopov; Vladimir I Kashuba; Eugene R Zabarovsky; Alexander V Zelenin
Assignment of CDK5R2 coding for the cyclin-dependent kinase 5, regulatory subunit 2 (NCK5AI protein) to human chromosome band 2q35 by fluorescent in situ hybridization.
Cytogenetics and cell genetics 2000;89(3-4):160-1.
2000: Alexei Protopopov; Vladimir I Kashuba; Raf M Podowski; Rinat Z Gizatullin; E Sonnhammer; Claes Wahlestedt; Eugene R Zabarovsky
Assignment of the GPR14 gene coding for the G-protein-coupled receptor 14 to human chromosome 17q25.3 by fluorescent in situ hybridization.
Cytogenetics and cell genetics 2000;88(3-4):312-3.
1999: Vladimir I Kashuba; Rinat Z Gizatullin; Alexei Protopopov; Jinfeng Li; N V Vorobieva; Ludmila Fedorova; Veronika I Zabarovska; Olga V Muravenko; Maria Kost-Alimova; D A Domninsky; Csaba Kiss; R Allikmets; V M Zakharyev; Eleonora Braga; Janos Sumegi; M Lerman; Claes Wahlestedt; Alexander V Zelenin; Denise Sheer; Gösta Winberg; Alexander Graphodatsky ; Lev L Kisselev; George Klein; Eugene R Zabarovsky
Analysis of NotI linking clones isolated from human chromosome 3 specific libraries.
Gene 1999;239(2):259-71.
1999: Jinfeng Li; Alexei Protopopov; Rinat Z Gizatullin; Csaba Kiss; Vladimir I Kashuba; Gösta Winberg; George Klein; Eugene R Zabarovsky
Identification of new tumor suppressor genes based on in vivo functional inactivation of a candidate gene.
FEBS letters 1999;451(3):289-94.
1997: Vladimir I Kashuba; Rinat Z Gizatullin; Alexei Protopopov; R Allikmets; S Korolev; Jinfeng Li; F Boldog; K Tory; Veronika I Zabarovska; Z Marcsek; Janos Sumegi; George Klein; Eugene R Zabarovsky; Lev L Kisselev
NotI linking/jumping clones of human chromosome 3: mapping of the TFRC, RAB7 and HAUSP genes to regions rearranged in leukemia and deleted in solid tumors.
FEBS letters 1997;419(2-3):181-5.
1997: Ludmila Fedorova; Maria Kost-Alimova; Rinat Z Gizatullin; Andrei Alimov; Veronika I Zabarovska; Anna Szeles; Alexei Protopopov; N V Vorobieva; Vladimir I Kashuba; George Klein; Alexander V Zelenin; Denise Sheer; Eugene R Zabarovsky
Assignment and ordering of twenty-three unique NotI-linking clones containing expressed genes including the guanosine 5'-monophosphate synthetase gene to human chromosome 3.
European journal of human genetics : EJHG 1997;5(2):110-6.
1997: Csaba Kiss; Jinfeng Li; Anna Szeles; Rinat Z Gizatullin; Vladimir I Kashuba; Tamara P Lushnikova; Alexei Protopopov; M Kelve; Hajnalka Kiss; Irina D Kholodnyuk; Stefan Imreh; George Klein; Eugene R Zabarovsky
Assignment of the ARHA and GPX1 genes to human chromosome bands 3p21.3 by in situ hybridization and with somatic cell hybrids.
Cytogenetics and cell genetics 1997;79(3-4):228-30.
1996: Alexei Protopopov; Rinat Z Gizatullin; Nadezhda V Vorobieva; M V Protopopova; Csaba Kiss; Vladimir I Kashuba; George Klein; Lev L Kisselev; Alexander Graphodatsky ; Eugene R Zabarovsky
Human chromosome 3: high-resolution fluorescence in situ hybridization mapping of 40 unique NotI linking clones homologous to genes and cDNAs.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 1996;4(6):443-7.
1996: V I Mayorov; L R Adkison; N V Vorobyeva; E A Khrapov; N G Kholodhov; Igor Rogozin; Tatyana B Nesterova; Alexei Protopopov; O V Sablina; Alexander Graphodatsky ; Suren M Zakian
Organization and chromosomal localization of a B1-like containing repeat of Microtus subarvalis.
Mammalian genome : official journal of the International Mammalian Genome Society 1996;7(8):593-7.
1996: Rinat Z Gizatullin; Alexei Protopopov; Veronika I Zabarovska; V M Zakharyev; Vladimir I Kashuba; George Klein; Eugene R Zabarovsky
Assignment of MOBP, encoding myelin-associated oligodendrocytic basic protein, to human chromosome bands 3p22-->p21.3 using somatic cell hybrids.
Cytogenetics and cell genetics 1996;74(4):291-2.
1996: M V Protopopova; Nadezhda V Vorobieva; Alexei Protopopov; Rinat Z Gizatullin; Vladimir I Kashuba; George Klein; Eugene R Zabarovsky; Alexander Graphodatsky
Assignment of the ERM gene (ETV5) coding for the ets-related protein to human chromosome band 3q28 by in situ hybridization.
Cytogenetics and cell genetics 1996;74(3):220.
1995: Nadezhda V Vorobieva; Alexei Protopopov; M Protopopova; Vladimir I Kashuba; Rando Allikmets; W Modi; Eugene R Zabarovsky; George Klein; Lev L Kisselev; Alexander Graphodatsky
Localization of human ARF2 and NCK genes and 13 other NotI-linking clones to chromosome 3 by fluorescence in situ hybridization.
Cytogenetics and cell genetics 1995;68(1-2):91-4.
1994: V G Matveeva; Nikolai Rubtsov; Alexei Protopopov
[Effectiveness in culturing amniocytes for prenatal diagnosis of chromosomal diseases].
Genetika 1994;30(4):539-41.
1994: Nikolai Rubtsov; Alexei Protopopov; V G Matveeva; Nadezhda V Rubtsova; Tatyana B Nesterova; SM Zakiian
[Rapid karyotyping of mammalian cells].
Genetika 1994;30(1):66-71.