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Farahnaz Rahmatpanah

Research Profile

Physiology

Chemicals & Drugs

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Oligonucleotide Array Sequence Analysis

Procedures

Gene Expression Profiling

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Genes & Molecular Sequences

Genome, Human

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Publications

TOP 3
Xin Chen; Zhenyu Jia; Michael McClelland; Farahnaz Rahmatpanah; Anne Sawyers; Shizhong Xu; Dan Mercola
An accurate prostate cancer prognosticator using a seven-gene signature plus Gleason score and taking cell type heterogeneity into account.
Zhenyu Jia; Waldemar Lernhardt; Michael McClelland; Farahnaz Rahmatpanah; Anne Sawyers; Manuel Sutton; Yipeng Wang; Xiao-Qin Xia; Xin Chen; Dan Mercola
Expression changes in the stroma of prostate cancer predict subsequent relapse.
Zhenyu Jia; Yipeng Wang; Anne Sawyers; Huazhen Yao; Farahnaz Rahmatpanah; Xiao-Qin Xia; Qiang Xu; Rebecca Pio; Tolga Turan; James A Koziol; Steve Goodison; Philip Carpenter; Jessica Wang-Rodriguez; Anne Simoneau; Frank Meyskens; Manuel Sutton; Waldemar Lernhardt; Thomas Beach; Joseph Monforte; Michael McClelland; Dan Mercola
Diagnosis of prostate cancer using differentially expressed genes in stroma.

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All Publications

2012: Xin Chen; Zhenyu Jia; Michael McClelland; Farahnaz Rahmatpanah; Anne Sawyers; Shizhong Xu; Dan Mercola
An accurate prostate cancer prognosticator using a seven-gene signature plus Gleason score and taking cell type heterogeneity into account.
PloS one 2012;7(9):e45178.
2012: Zhenyu Jia; Waldemar Lernhardt; Michael McClelland; Farahnaz Rahmatpanah; Anne Sawyers; Manuel Sutton; Yipeng Wang; Xiao-Qin Xia; Xin Chen; Dan Mercola
Expression changes in the stroma of prostate cancer predict subsequent relapse.
PloS one 2012;7(8):e41371.
2011: Zhenyu Jia; Yipeng Wang; Anne Sawyers; Huazhen Yao; Farahnaz Rahmatpanah; Xiao-Qin Xia; Qiang Xu; Rebecca Pio; Tolga Turan; James A Koziol; Steve Goodison; Philip Carpenter; Jessica Wang-Rodriguez; Anne Simoneau; Frank Meyskens; Manuel Sutton; Waldemar Lernhardt; Thomas Beach; Joseph Monforte; Michael McClelland; Dan Mercola
Diagnosis of prostate cancer using differentially expressed genes in stroma.
Cancer research 2011;71(7):2476-87.
2009: Farahnaz Rahmatpanah; Tait D Shanafelt; Huidong Shi; Ozy Sjahputera; Kristen H Taylor; Elise C Welsh; James E Wooldridge; Stephanie Carstens; Wade Davis; Sam I Hooshmand; Neil E Kay; Gerald L Arthur; Lynda B Bennett; Charles W Caldwell
Large-scale analysis of DNA methylation in chronic lymphocytic leukemia.
Epigenomics 2009;1(1):39-61.
2009: Jeffrey N Bryan; Mohamed Jabbes; Linda M Berent; Gerald L Arthur; Kristen H Taylor; Kerry C Rissetto; Carolyn J Henry; Farahnaz Rahmatpanah; Wendi V Rankin; Jose A Villamil; Michael R Lewis; Charles Caldwell
Hypermethylation of the DLC1 CpG island does not alter gene expression in canine lymphoma.
BMC genetics 2009;10():73.
2007: Ozy Sjahputera; James M Keller; Wade Davis; Kristen H Taylor; Farahnaz Rahmatpanah; Huidong Shi; Derek T Anderson; Samuel N Blisard; Robert H Luke; Mihail Popescu; Gerald C Arthur; Charles Caldwell
Relational analysis of CpG islands methylation and gene expression in human lymphomas using possibilistic C-means clustering and modified cluster fuzzy density.
IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM 2007;4(2):176-89.
2007: Kristen H Taylor; Keila E Pena-Hernandez; Wade Davis; Gerald L Arthur; Deiter J Duff; Huidong Shi; Farahnaz Rahmatpanah; Ozy Sjahputera; Charles Caldwell
Large-scale CpG methylation analysis identifies novel candidate genes and reveals methylation hotspots in acute lymphoblastic leukemia.
Cancer research 2007;67(6):2617-25.
2007: Huidong Shi; Juyuan Guo; Deiter J Duff; Farahnaz Rahmatpanah; Rebecca Chitima-Matsiga; Mufadhal Al-Kuhlani; Kristen H Taylor; Ozy Sjahputera; Melinda Andreski; James E Wooldridge; Charles Caldwell
Discovery of novel epigenetic markers in non-Hodgkin's lymphoma.
Carcinogenesis 2007;28(1):60-70.
2006: Farahnaz Rahmatpanah; S Carstens; Juyuan Guo; Ozy Sjahputera; Kristen H Taylor; Deiter J Duff; Huidong Shi; Wade Davis; S I Hooshmand; R Chitma-Matsiga; Charles Caldwell
Differential DNA methylation patterns of small B-cell lymphoma subclasses with different clinical behavior.
Leukemia 2006;20(10):1855-62.
2005: Juyuan Guo; Matthias Burger; Inko Nimmrich; Sabine Maier; Evelyne Becker; Buelent Genc; Deiter J Duff; Farahnaz Rahmatpanah; Rebecca Chitma-Matsiga; Huidong Shi; Kurt Berlin; Hui-Ming (Tim) Huang; Charles Caldwell
Differential DNA methylation of gene promoters in small B-cell lymphomas.
American journal of clinical pathology 2005;124(3):430-9.
2003: Pearlly S Yan; Huidong Shi; Farahnaz Rahmatpanah; Timothy H-C Hsiau; Andrew H-A Hsiau; Yu-Wei Leu; Joseph C Liu; Hui-Ming (Tim) Huang
Differential distribution of DNA methylation within the RASSF1A CpG island in breast cancer.
Cancer research 2003;63(19):6178-86.
2003: Yu-Wei Leu; Farahnaz Rahmatpanah; Huidong Shi; Susan Wei; Joseph C Liu; Pearlly S Yan; Hui-Ming (Tim) Huang
Double RNA interference of DNMT3b and DNMT1 enhances DNA demethylation and gene reactivation.
Cancer research 2003;63(19):6110-5.
2003: Huidong Shi; Susan Wei; Yu-Wei Leu; Farahnaz Rahmatpanah; Joseph C Liu; Pearlly S Yan; Kenneth P Nephew; Hui-Ming (Tim) Huang
Triple analysis of the cancer epigenome: an integrated microarray system for assessing gene expression, DNA methylation, and histone acetylation.
Cancer research 2003;63(9):2164-71.
2002: Pearlly S Yan; Chuan-Mu Chen; Huidong Shi; Farahnaz Rahmatpanah; Susan Wei; Hui-Ming (Tim) Huang
Applications of CpG island microarrays for high-throughput analysis of DNA methylation.
The Journal of nutrition 2002;132(8 Suppl):2430S-2434S.
2002: Susan Wei; Chuan-Mu Chen; Gordon Strathdee; Jaturon Harnsomburana; Chi-Ren Shyu; Farahnaz Rahmatpanah; Huidong Shi; Shu-Wing Ng; Pearlly S Yan; Kenneth P Nephew; Robert Brown; Hui-Ming (Tim) Huang
Methylation microarray analysis of late-stage ovarian carcinomas distinguishes progression-free survival in patients and identifies candidate epigenetic markers.
Clinical cancer research : an official journal of the American Association for Cancer Research 2002;8(7):2246-52.
2002: Huidong Shi; Pearlly S Yan; Chuan-Mu Chen; Farahnaz Rahmatpanah; Catherine Lofton-Day; Charles Caldwell; Hui-Ming (Tim) Huang
Expressed CpG island sequence tag microarray for dual screening of DNA hypermethylation and gene silencing in cancer cells.
Cancer research 2002;62(11):3214-20.
2001: Pearlly S Yan; Chuan-Mu Chen; Huidong Shi; Farahnaz Rahmatpanah; Susan Wei; Charles Caldwell; Hui-Ming (Tim) Huang
Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays.
Cancer research 2001;61(23):8375-80.