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Paul Rainey
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Research Profile (preview)
Living Beings
Genes & Molecular Sequences
Physiology
Chemicals & Drugs
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Phenomena
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Network (preview)
10
Spiers, Andrew
9
Buckling, Angus
7
Kassen, Rees
5
Preston, Gail
5
Brockhurst, Michael
4
Bailey, Mark
4
Travisano, Michael
3
Zhang, Xue-Xian
3
Bell, Graham
3
Gehrig, Stefanie
3
Knight, Christopher
3
Lilley, Andrew
2
Malone, Jacob
2
Moon, Christina
2
Goymer, Patrick
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Publications
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Geonetwork of Paul Rainey (preview)
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All Publications
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2008: Moon Christina D; Zhang Xue-Xian; Matthijs Sandra; Schäfer Mathias; Budzikiewicz Herbert; Rainey Paul B
Genomic, genetic and structural analysis of pyoverdine-mediated iron acquisition in the plant growth-promoting bacterium Pseudomonas fluorescens SBW25.
BMC microbiology 2008;8():7.
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2007: Giddens Stephen R; Jackson Robert W; Moon Christina D; Jacobs Michael A; Zhang Xue-Xian; Gehrig Stefanie M; Rainey Paul B
Mutational activation of niche-specific genes provides insight into regulatory networks and bacterial function in a complex environment.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(46):18247-52.
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2007: Tett Adrian; Spiers Andrew J; Crossman Lisa C; Ager Duane; Ciric Lena; Dow J Maxwell; Fry John C; Harris David; Lilley Andrew; Oliver Anna; Parkhill Julian; Quail Michael A; Rainey Paul B; Saunders Nigel J; Seeger Kathy; Snyder Lori A S; Squares Rob; Thomas Christopher M; Turner Sarah L; Zhang Xue-Xian; Field Dawn; Bailey Mark J
Sequence-based analysis of pQBR103; a representative of a unique, transfer-proficient mega plasmid resident in the microbial community of sugar beet.
The ISME journal 2007;1(4):331-40.
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2007: Bantinaki Eleni; Kassen Rees; Knight Christopher G; Robinson Zena; Spiers Andrew J; Rainey Paul B
Adaptive divergence in experimental populations of Pseudomonas fluorescens. III. Mutational origins of wrinkly spreader diversity.
Genetics 2007;176(1):441-53.
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2007: Malone J G; Williams R; Christen M; Jenal U; Spiers A J; Rainey P B
The structure-function relationship of WspR, a Pseudomonas fluorescens response regulator with a GGDEF output domain.
Microbiology (Reading, England) 2007;153(Pt 4):980-94.
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2007: Buckling A; Brockhurst M A; Travisano M; Rainey P B
Experimental adaptation to high and low quality environments under different scales of temporal variation.
Journal of evolutionary biology 2007;20(1):296-300.
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2006: Knight Christopher G; Zitzmann Nicole; Prabhakar Sripadi; Antrobus Robin; Dwek Raymond; Hebestreit Holger; Rainey Paul B
Unraveling adaptive evolution: how a single point mutation affects the protein coregulation network.
Nature genetics 2006;38(9):1015-22.
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2006: Zhang Xue-Xian; George Andrew; Bailey Mark J; Rainey Paul B
The histidine utilization (hut) genes of Pseudomonas fluorescens SBW25 are active on plant surfaces, but are not required for competitive colonization of sugar beet seedlings.
Microbiology (Reading, England) 2006;152(Pt 6):1867-75.
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2006: Goymer Patrick; Kahn Sophie G; Malone Jacob G; Gehrig Stefanie M; Spiers Andrew J; Rainey Paul B
Adaptive divergence in experimental populations of Pseudomonas fluorescens. II. Role of the GGDEF regulator WspR in evolution and development of the wrinkly spreader phenotype.
Genetics 2006;173(2):515-26.
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2006: Brockhurst M A; Buckling A; Rainey P B
Spatial heterogeneity and the stability of host-parasite coexistence.
Journal of evolutionary biology 2006;19(2):374-9.
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2006: Brockhurst Michael A; Fenton Andrew; Roulston Barrie; Rainey Paul B
The impact of phages on interspecific competition in experimental populations of bacteria.
BMC ecology 2006;6():19.
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2005: Jackson Robert W; Preston Gail M; Rainey Paul B
Genetic characterization of Pseudomonas fluorescens SBW25 rsp gene expression in the phytosphere and in vitro.
Journal of bacteriology 2005;187(24):8477-88.
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2005: Spiers Andrew J; Rainey Paul B
The Pseudomonas fluorescens SBW25 wrinkly spreader biofilm requires attachment factor, cellulose fibre and LPS interactions to maintain strength and integrity.
Microbiology (Reading, England) 2005;151(Pt 9):2829-39.
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2005: Brockhurst Michael A; Buckling Angus; Rainey Paul B
The effect of a bacteriophage on diversification of the opportunistic bacterial pathogen, Pseudomonas aeruginosa.
Proceedings. Biological sciences / The Royal Society 2005;272(1570):1385-91.
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2004: Zhang Xue-Xian; Lilley Andrew K; Bailey Mark J; Rainey Paul B
The indigenous Pseudomonas plasmid pQBR103 encodes plant-inducible genes, including three putative helicases.
FEMS microbiology ecology 2004;51(1):9-17.
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2004: Kassen Rees; Llewellyn Martin; Rainey Paul B
Ecological constraints on diversification in a model adaptive radiation.
Nature 2004;431(7011):984-8.
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2004: Zhang Xue-Xian; Lilley Andrew K; Bailey Mark J; Rainey Paul B
Functional and phylogenetic analysis of a plant-inducible oligoribonuclease (orn) gene from an indigenous Pseudomonas plasmid.
Microbiology (Reading, England) 2004;150(Pt 9):2889-98.
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2004: Knight Christopher G; Kassen Rees; Hebestreit Holger; Rainey Paul B
Global analysis of predicted proteomes: functional adaptation of physical properties.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(22):8390-5.
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2004: MacLean R Craig; Bell Graham; Rainey Paul B
The evolution of a pleiotropic fitness tradeoff in Pseudomonas fluorescens.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(21):8072-7.
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2004: Jessup Christine M; Kassen Rees; Forde Samantha E; Kerr Ben; Buckling Angus; Rainey Paul B; Bohannan Brendan J M
Big questions, small worlds: microbial model systems in ecology.
Trends in ecology & evolution (Personal edition) 2004;19(4):189-97.
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2004: Brockhurst Michael A; Rainey Paul B; Buckling Angus
The effect of spatial heterogeneity and parasites on the evolution of host diversity.
Proceedings. Biological sciences / The Royal Society 2004;271(1534):107-11.
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2004: Kassen Rees; Rainey Paul B
The ecology and genetics of microbial diversity.
Annual review of microbiology 2004;58():207-31.
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2003: Gal Micaela; Preston Gail M; Massey Ruth C; Spiers Andrew J; Rainey Paul B
Genes encoding a cellulosic polymer contribute toward the ecological success of Pseudomonas fluorescens SBW25 on plant surfaces.
Molecular ecology 2003;12(11):3109-21.
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2003: Spiers Andrew J; Bohannon John; Gehrig Stefanie M; Rainey Paul B
Biofilm formation at the air-liquid interface by the Pseudomonas fluorescens SBW25 wrinkly spreader requires an acetylated form of cellulose.
Molecular microbiology 2003;50(1):15-27.
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2003: Rainey Paul B; Rainey Katrina
Evolution of cooperation and conflict in experimental bacterial populations.
Nature 2003;425(6953):72-4.
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2003: Aldridge Phillip; Paul Ralf; Goymer Patrick; Rainey Paul; Jenal Urs
Role of the GGDEF regulator PleD in polar development of Caulobacter crescentus.
Molecular microbiology 2003;47(6):1695-708.
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2002: Buckling Angus; Rainey Paul B
Antagonistic coevolution between a bacterium and a bacteriophage.
Proceedings. Biological sciences / The Royal Society 2002;269(1494):931-6.
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2002: Spiers Andrew J; Kahn Sophie G; Bohannon John; Travisano Michael; Rainey Paul B
Adaptive divergence in experimental populations of Pseudomonas fluorescens. I. Genetic and phenotypic bases of wrinkly spreader fitness.
Genetics 2002;161(1):33-46.
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2001: Preston G M; Bertrand N; Rainey P B
Type III secretion in plant growth-promoting Pseudomonas fluorescens SBW25.
Molecular microbiology 2001;41(5):999-1014.
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2001: Spiers A J; Field D; Bailey M; Rainey P B
Notes on designing a partial genomic database: The PfSBW25 Encyclopaedia, a sequence database for Pseudomonas fluorescens SBW25.
Microbiology (Reading, England) 2001;147(Pt 2):247-9.
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2000: Buckling A; Kassen R; Bell G; Rainey P B
Disturbance and diversity in experimental microcosms.
Nature 2000;408(6815):961-4.
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2000: Rainey P B; Preston G M
In vivo expression technology strategies: valuable tools for biotechnology.
Current opinion in biotechnology 2000;11(5):440-4.
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2000: Spiers A J; Buckling A; Rainey P B
The causes of Pseudomonas diversity.
Microbiology (Reading, England) 2000;146 ( Pt 10)():2345-50.
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2000: Kassen R; Buckling A; Bell G; Rainey P B
Diversity peaks at intermediate productivity in a laboratory microcosm.
Nature 2000;406(6795):508-12.
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1999: Rainey P B
Adaptation of Pseudomonas fluorescens to the plant rhizosphere.
Environmental microbiology 1999;1(3):243-57.
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1998: Haubold B; Travisano M; Rainey P B; Hudson R R
Detecting linkage disequilibrium in bacterial populations.
Genetics 1998;150(4):1341-8.
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1998: Preston G M; Haubold B; Rainey P B
Bacterial genomics and adaptation to life on plants: implications for the evolution of pathogenicity and symbiosis.
Current opinion in microbiology 1998;1(5):589-97.
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1998: Rainey P B; Travisano M
Adaptive radiation in a heterogeneous environment.
Nature 1998;394(6688):69-72.
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1997: Rainey P B; Heithoff D M; Mahan M J
Single-step conjugative cloning of bacterial gene fusions involved in microbe-host interactions.
Molecular & general genetics : MGG 1997;256(1):84-7.
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1996: Rainey P B; Bailey M J
Physical and genetic map of the Pseudomonas fluorescens SBW25 chromosome.
Molecular microbiology 1996;19(3):521-33.
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