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Alban Ramette

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TOP 3
Sandra Schöttner; Hans Tore Rapp; Antje Boetius; Paco Cárdenas; Friederike Hoffmann; Alban Ramette
Relationships between host phylogeny, host type and bacterial community diversity in cold-water coral reef sponges.
Sara Kleindienst; Rudolf Amann; Alban Ramette; Katrin Knittel
Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments.
Raeid M M Abed; Patrick De Deckker; Vera Hübner; Alban Ramette; Dirk de Beer
Microbial diversity of eolian dust sources from saline lake sediments and biological soil crusts in arid Southern Australia.

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All Publications

2013: Sandra Schöttner; Hans Tore Rapp; Antje Boetius; Paco Cárdenas; Friederike Hoffmann; Alban Ramette
Relationships between host phylogeny, host type and bacterial community diversity in cold-water coral reef sponges.
PloS one 2013;8(2):e55505.
2012: Sara Kleindienst; Rudolf Amann; Alban Ramette; Katrin Knittel
Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments.
Environmental microbiology 2012;14(10):2689-710.
2012: Raeid M M Abed; Patrick De Deckker; Vera Hübner; Alban Ramette; Dirk de Beer
Microbial diversity of eolian dust sources from saline lake sediments and biological soil crusts in arid Southern Australia.
FEMS microbiology ecology 2012;80(2):294-304.
2012: Christina Bienhold; Antje Boetius; Alban Ramette
The energy-diversity relationship of complex bacterial communities in Arctic deep-sea sediments.
The ISME journal 2012;6(4):724-32.
2012: Angélique Gobet; Susan M Huse; Christopher Quince; Simone I Böer; Antje Boetius; Mitchell L Sogin; Justus E E van Beusekom; Alban Ramette
Diversity and dynamics of rare and of resident bacterial populations in coastal sands.
The ISME journal 2012;6(3):542-53.
2012: Jan Bauermeister; Alban Ramette; Sharmishtha Dattagupta
Repeatedly evolved host-specific ectosymbioses between sulfur-oxidizing bacteria and amphipods living in a cave ecosystem.
PloS one 2012;7(11):e50254.
2012: Yvonne Sawall; Claudio Richter; Alban Ramette
Effects of eutrophication, seasonality and macrofouling on the diversity of bacterial biofilms in equatorial coral reefs.
PloS one 2012;7(7):e39951.
2012: Danny Ionescu; Jonathan B Laronne; Tobias Licha; Christian Lott; Yaniv Y Munwes; Aharon Oren; Jörg Peplies; Lubos Polerecky; Christian Quast; Alban Ramette; Tino Rödiger; Martin Sauter; Christian Siebert; Hans-Joachim Stärk; Thorsten Dittmar; Stefan Geyer; Frank Oliver Glöckner; Stefan Häusler; Mina Bižić-Ionescu; Dirk de Beer
Microbial and chemical characterization of underwater fresh water springs in the Dead Sea.
PloS one 2012;7(6):e38319.
2012: Sandra Schöttner; Christian Wild; Antje Boetius; Friederike Hoffmann; Alban Ramette
Spatial scales of bacterial diversity in cold-water coral reef ecosystems.
PloS one 2012;7(3):e32093.
2011: Sandra Schöttner; Christian Wild; Stefanie Grünke; Barbara Pfitzner; Mohammed Rasheed; Alban Ramette
Drivers of bacterial diversity dynamics in permeable carbonate and silicate coral reef sands from the Red Sea.
Environmental microbiology 2011;13(7):1815-26.
2011: Alban Ramette; Michele Frapolli; Marion Fischer-Le Saux; C Gruffaz; Jean-Marie Meyer; Geneviève Défago; Laurent Sutra; Yvan Moënne-Loccoz
Pseudomonas protegens sp. nov., widespread plant-protecting bacteria producing the biocontrol compounds 2,4-diacetylphloroglucinol and pyoluteorin.
Systematic and applied microbiology 2011;34(3):180-8.
2011: Ivaylo Kostadinov; Renzo Kottmann; Alban Ramette; Jost Waldmann; Pier Luigi Buttigieg; Frank Oliver Glöckner
Quantifying the effect of environment stability on the transcription factor repertoire of marine microbes.
Microbial informatics and experimentation 2011;1(1):9.
2011: Lucie Zinger; Mitchell Sogin; David B Mark Welch; Linda A Amaral Zettler; Antje Boetius; Jed A Fuhrman; M Claire Horner-Devine; Susan M Huse; Jennifer B H Martiny; Alban Ramette
Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems.
PloS one 2011;6(9):e24570.
2010: Alexandra Meziti; Alban Ramette; Eleni Mente; Kormas Aristomenis Kormas
Temporal shifts of the Norway lobster (Nephrops norvegicus) gut bacterial communities.
FEMS microbiology ecology 2010;74(2):472-84.
2010: Caroline Verna; Helena Wiklund; Thomas G Dahlgren; Françoise Gaill; Adrian G Glover; Alban Ramette; Nicole Dubilier
High symbiont diversity in the bone-eating worm Osedax mucofloris from shallow whale-falls in the North Atlantic.
Environmental microbiology 2010;12(8):2355-70.
2010: Jillian M Petersen; Alban Ramette; Magali Zbinden; Marie-Anne Cambon-Bonavita; Christian Lott; Nicole Dubilier
Dual symbiosis of the vent shrimp Rimicaris exoculata with filamentous gamma- and epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields.
Environmental microbiology 2010;12(8):2204-18.
2010: Angélique Gobet; Christopher Quince; Alban Ramette
Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets.
Nucleic acids research 2010;38(15):e155.
2010: Daniel Santillano; Antje Boetius; Alban Ramette
Improved dsrA-based terminal restriction fragment length polymorphism analysis of sulfate-reducing bacteria.
Applied and environmental microbiology 2010;76(15):5308-11.
2010: Stefanie Grünke; Anna Lichtschlag; Dirk de Beer; Marcel M M Kuypers; Tina Lösekann-Behrens; Alban Ramette; Antje Boetius
Novel observations of Thiobacterium, a sulfur-storing Gammaproteobacterium producing gelatinous mats.
The ISME journal 2010;4(8):1031-43.
2010: Claudia Knief; Alban Ramette; Lisa Frances; Carlos Alonso-Blanco; Julia A Vorholt
Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere.
The ISME journal 2010;4(6):719-28.
2010: Regina Schauer; Christina Bienhold; Alban Ramette; Jens Harder
Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean.
The ISME journal 2010;4(2):159-70.
2009: Shuo Zhao; Alban Ramette; Gui-Lan Niu; Hong Liu; Ning-Yi Zhou
Effects of nitrobenzene contamination and of bioaugmentation on nitrification and ammonia-oxidizing bacteria in soil.
FEMS microbiology ecology 2009;70(2):159-67.
2009: Simone I Böer; Stefanie I C Hedtkamp; Justus E E van Beusekom; Jed A Fuhrman; Antje Boetius; Alban Ramette
Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands.
The ISME journal 2009;3(7):780-91.
2009: Sandra Schöttner; Friederike Hoffmann; Christian Wild; Hans Tore Rapp; Antje Boetius; Alban Ramette
Inter- and intra-habitat bacterial diversity associated with cold-water corals.
The ISME journal 2009;3(6):756-9.
2009: Alban Ramette
Quantitative community fingerprinting methods for estimating the abundance of operational taxonomic units in natural microbial communities.
Applied and environmental microbiology 2009;75(8):2495-505.
2008: Linda A Amaral Zettler; Jörg Peplies; Alban Ramette; Bernhard Fuchs; Wolfgang Ludwig; Frank Oliver Glöckner
Proceedings of the international workshop on Ribosomal RNA technology, April 7-9, 2008, Bremen, Germany.
Systematic and applied microbiology 2008;31(4):258-68.
2008: Janette L Jacobs; Anthony C Fasi; Alban Ramette; James J Smith; Ray Hammerschmidt; George W Sundin
Identification and onion pathogenicity of Burkholderia cepacia complex isolates from the onion rhizosphere and onion field soil.
Applied and environmental microbiology 2008;74(10):3121-9.
2007: Alban Ramette
Multivariate analyses in microbial ecology.
FEMS microbiology ecology 2007;62(2):142-60.
2007: Alban Ramette; James M Tiedje
Multiscale responses of microbial life to spatial distance and environmental heterogeneity in a patchy ecosystem.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(8):2761-6.
2007: Alban Ramette; James M Tiedje
Biogeography: an emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution.
Microbial ecology 2007;53(2):197-207.
2006: Konstantinos T Konstantinidis; Alban Ramette; James M Tiedje
The bacterial species definition in the genomic era.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2006;361(1475):1929-40.
2006: Konstantinos T Konstantinidis; Alban Ramette; James M Tiedje
Toward a more robust assessment of intraspecies diversity, using fewer genetic markers.
Applied and environmental microbiology 2006;72(11):7286-93.
2006: Patrick S G Chain; Vincent J Denef; Konstantinos T Konstantinidis; Lisa M Vergez; Loreine Agulló; Valeria Latorre Reyes; Loren Hauser; Macarena Córdova; Luis Gómez; Myriam González; Miriam Land; Victoria Lao; Frank W Larimer; John J LiPuma; Eshwar Mahenthiralingam; Stephanie Malfatti; Christopher J Marx; Jacob Parnell; Alban Ramette; Paul Richardson; Michael Seeger; Daryl Smith; Theodore Spilker; Woo Jun Sul; Tamara V Tsoi; Luke E Ulrich; Igor B Zhulin; James M Tiedje
Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(42):15280-7.
2006: George W Payne; Alban Ramette; Helen L Rose; Andrew J Weightman; T Hefin Jones; James M Tiedje; Eshwar Mahenthiralingam
Application of a recA gene-based identification approach to the maize rhizosphere reveals novel diversity in Burkholderia species.
FEMS microbiology letters 2006;259(1):126-32.
2006: Alban Ramette; Yvan Moënne-Loccoz; Geneviève Défago
Genetic diversity and biocontrol potential of fluorescent pseudomonads producing phloroglucinols and hydrogen cyanide from Swiss soils naturally suppressive or conducive to Thielaviopsis basicola-mediated black root rot of tobacco.
FEMS microbiology ecology 2006;55(3):369-81.
2005: Alban Ramette; John J LiPuma; James M Tiedje
Species abundance and diversity of Burkholderia cepacia complex in the environment.
Applied and environmental microbiology 2005;71(3):1193-201.
2003: Alban Ramette; Michele Frapolli; Geneviève Défago; Yvan Moënne-Loccoz
Phylogeny of HCN synthase-encoding hcnBC genes in biocontrol fluorescent pseudomonads and its relationship with host plant species and HCN synthesis ability.
Molecular plant-microbe interactions : MPMI 2003;16(6):525-35.
2003: Alban Ramette; Yvan Moënne-Loccoz; Geneviève Défago
Prevalence of fluorescent pseudomonads producing antifungal phloroglucinols and/or hydrogen cyanide in soils naturally suppressive or conducive to tobacco black root rot.
FEMS microbiology ecology 2003;44(1):35-43.
2001: Alban Ramette; Yvan Moënne-Loccoz; Geneviève Défago
Polymorphism of the polyketide synthase gene phID in biocontrol fluorescent pseudomonads producing 2,4-diacetylphloroglucinol and comparison of PhID with plant polyketide synthases.
Molecular plant-microbe interactions : MPMI 2001;14(5):639-52.