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Efrain Ribot

Research Profile

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Chemicals & Drugs

DNA, Bacterial

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United States

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Silvina P Brengi; Nicole Cernela; Kara Cooper; Carol Iversen; Bette Jensen; Stephen B O'Brien; Franco Pagotto; Mariana Pichel; Efrain M Ribot; Roger Stephan; Matthew Arduino; Norma Binsztein; Séamus Fanning
Development and validation of a PulseNet standardized protocol for subtyping isolates of Cronobacter species.
Mariana Pichel; Guillermo Pimentel; Efrain M Ribot; Tania Ibelli Vaz; Norma Binsztein; Suleiman Al-Busaidy; Pamela Araya; Silvina P Brengi; Kara L F Cooper; Jorge Fernández; Peter Gerner-Smidt; Kai Man Kam; Myriam Morcos; Celine Nadon; Eva M Nielsen; Enrique Pérez-Gutiérrez
Standardization and international multicenter validation of a PulseNet pulsed-field gel electrophoresis protocol for subtyping Shigella flexneri isolates.
Fenyun Liu; Efrain M Ribot; Rodolphe Barrangou; Peter Gerner-Smidt; Bhushan M Jayarao; Subhashinie Kariyawasam; Stephen J Knabel; Edward G Dudley
Subtyping Salmonella enterica serovar enteritidis isolates from different sources by using sequence typing based on virulence genes and clustered regularly interspaced short palindromic repeats (CRISPRs).

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All Publications

2012: Silvina P Brengi; Nicole Cernela; Kara Cooper; Carol Iversen; Bette Jensen; Stephen B O'Brien; Franco Pagotto; Mariana Pichel; Efrain M Ribot; Roger Stephan; Matthew Arduino; Norma Binsztein; Séamus Fanning
Development and validation of a PulseNet standardized protocol for subtyping isolates of Cronobacter species.
Foodborne pathogens and disease 2012;9(9):861-7.
2012: Mariana Pichel; Guillermo Pimentel; Efrain M Ribot; Tania Ibelli Vaz; Norma Binsztein; Suleiman Al-Busaidy; Pamela Araya; Silvina P Brengi; Kara L F Cooper; Jorge Fernández; Peter Gerner-Smidt; Kai Man Kam; Myriam Morcos; Celine Nadon; Eva M Nielsen; Enrique Pérez-Gutiérrez
Standardization and international multicenter validation of a PulseNet pulsed-field gel electrophoresis protocol for subtyping Shigella flexneri isolates.
Foodborne pathogens and disease 2012;9(5):418-24.
2011: Fenyun Liu; Efrain M Ribot; Rodolphe Barrangou; Peter Gerner-Smidt; Bhushan M Jayarao; Subhashinie Kariyawasam; Stephen J Knabel; Edward G Dudley
Subtyping Salmonella enterica serovar enteritidis isolates from different sources by using sequence typing based on virulence genes and clustered regularly interspaced short palindromic repeats (CRISPRs).
Applied and environmental microbiology 2011;77(13):4520-6.
2011: Fenyun Liu; Rodolphe Barrangou; Peter Gerner-Smidt; Efrain M Ribot; Stephen J Knabel; Edward G Dudley
Novel virulence gene and clustered regularly interspaced short palindromic repeat (CRISPR) multilocus sequence typing scheme for subtyping of the major serovars of Salmonella enterica subsp. enterica.
Applied and environmental microbiology 2011;77(6):1946-56.
2010: Jessica L Halpin; Nancy M Garrett; Efrain M Ribot; Lewis M Graves; Kara L Cooper
Re-evaluation, optimization, and multilaboratory validation of the PulseNet-standardized pulsed-field gel electrophoresis protocol for Listeria monocytogenes.
Foodborne pathogens and disease 2010;7(3):293-8.
2010: Eija Hyytia-Trees; Patricia Lafon; Paul Vauterin; Efrain M Ribot
Multilaboratory validation study of standardized multiple-locus variable-number tandem repeat analysis protocol for shiga toxin-producing Escherichia coli O157: a novel approach to normalize fragment size data between capillary electrophoresis platforms.
Foodborne pathogens and disease 2010;7(2):129-36.
2008: Kai Man Kam; Cindy K Y Luey; Michele B Parsons; Kara L F Cooper; G Balakrish Nair; M Alam; M Atiqul Islam; Danny T L Cheung; Y W Chu; T Ramamurthy; G P Pazhani; S K Bhattacharya; Haruo Watanabe; J Terajima; E Arakawa; O-A Ratchtrachenchai; S Huttayananont; Efrain M Ribot; Peter Gerner-Smidt; Bala Swaminathan
Evaluation and validation of a PulseNet standardized pulsed-field gel electrophoresis protocol for subtyping Vibrio parahaemolyticus: an international multicenter collaborative study.
Journal of clinical microbiology 2008;46(8):2766-73.
2007: Maiko Sasaki; Shanthi V Sitaraman; Brian A Babbin; Peter Gerner-Smidt; Efrain M Ribot; Nancy Garrett; Joel A Alpern; Adil Akyildiz; Arianne L Theiss; Asma Nusrat; Jan-Michael Klapproth
Invasive Escherichia coli are a feature of Crohn's disease.
Laboratory investigation; a journal of technical methods and pathology 2007;87(10):1042-54.
2007: Eija K Hyytiä-Trees; Kara Cooper; Efrain M Ribot; Peter Gerner-Smidt
Recent developments and future prospects in subtyping of foodborne bacterial pathogens.
Future microbiology 2007;2(2):175-85.
2007: M B Parsons; K L F Cooper; K A Kubota; Nancy Puhr; S Simington; P S Calimlim; Dianna Schoonmaker-Bopp; Cheryl A Bopp; Bala Swaminathan; Peter Gerner-Smidt; Efrain M Ribot
PulseNet USA standardized pulsed-field gel electrophoresis protocol for subtyping of Vibrio parahaemolyticus.
Foodborne pathogens and disease 2007;4(3):285-92.
2006: Wei Zhang; Weihong Qi; Thomas J Albert; Alifiya Motiwala; David Alland; Eija K Hyytia-Trees; Efrain M Ribot; Patricia I Fields; Thomas S Whittam; Bala Swaminathan
Probing genomic diversity and evolution of Escherichia coli O157 by single nucleotide polymorphisms.
Genome research 2006;16(6):757-67.
2006: Eija K Hyytiä-Trees; Sandra C Smole; Patricia A Fields; Bala Swaminathan; Efrain M Ribot
Second generation subtyping: a proposed PulseNet protocol for multiple-locus variable-number tandem repeat analysis of Shiga toxin-producing Escherichia coli O157 (STEC O157).
Foodborne pathogens and disease 2006;3(1):118-31.
2006: Efrain M Ribot; Mary-Ann Fair; Romesh Gautom; D N Cameron; Susan B Hunter; Bala Swaminathan; Timothy J Barrett
Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157:H7, Salmonella, and Shigella for PulseNet.
Foodborne pathogens and disease 2006;3(1):59-67.
2006: K L F Cooper; C K Y Luey; Michele Bird; Jun Terajima; G Balakrish Nair; Kai Man Kam; Eiji Arakawa; Ashrafus Safa; Danny T L Cheung; Choi Ping Law; Haruo Watanabe; K Kubota; Bala Swaminathan; Efrain M Ribot
Development and validation of a PulseNet standardized pulsed-field gel electrophoresis protocol for subtyping of Vibrio cholerae.
Foodborne pathogens and disease 2006;3(1):51-8.
2006: Peter Gerner-Smidt; Kelley Hise; Jennifer Kincaid; S Hunter; Shari Shea; Eija K Hyytiä-Trees; Efrain M Ribot; Bala Swaminathan
PulseNet USA: a five-year update.
Foodborne pathogens and disease 2006;3(1):9-19.
2005: Susan B Hunter; Paul Vauterin; Mary-Ann Lambert-Fair; M Susan Van Duyne; Kristy Kubota; Lewis M Graves; Donna Wrigley; Timothy Barrett; Efrain M Ribot
Establishment of a universal size standard strain for use with the PulseNet standardized pulsed-field gel electrophoresis protocols: converting the national databases to the new size standard.
Journal of clinical microbiology 2005;43(3):1045-50.
2002: Alex R Hoffmaster; Collette Fitzgerald; Efrain M Ribot; Leonard W Mayer; Tanja Popovic
Molecular subtyping of Bacillus anthracis and the 2001 bioterrorism-associated anthrax outbreak, United States.
Emerging infectious diseases 2002;8(10):1111-6.
2002: Efrain M Ribot; Rachel K Wierzba; Frederick J Angulo; Timothy J Barrett
Salmonella enterica serotype Typhimurium DT104 isolated from humans, United States, 1985, 1990, and 1995.
Emerging infectious diseases 2002;8(4):387-91.
2001: Efrain M Ribot; Collette Fitzgerald; Kristy Kubota; Bala Swaminathan; Timothy J Barrett
Rapid pulsed-field gel electrophoresis protocol for subtyping of Campylobacter jejuni.
Journal of clinical microbiology 2001;39(5):1889-94.
2001: Tanja Popovic; Susanna Schmink; N A Rosenstein; Gloria W Ajello; Michael W Reeves; Bonnie B Plikaytis; Susan B Hunter; Efrain M Ribot; David J Boxrud; Maria Lucia C Tondella; C Kim; Corie A Noble; Elizabeth A Mothershed; John M Besser; Bradley A Perkins
Evaluation of pulsed-field gel electrophoresis in epidemiological investigations of meningococcal disease outbreaks caused by Neisseria meningitidis serogroup C.
Journal of clinical microbiology 2001;39(1):75-85.
2000: Eileen Dunne; Paul D Fey; P Kludt; Roshan Reporter; F Mostashari; Pamela J Shillam; J Wicklund; C Miller; Ben Holland; Karen Stamey; Timothy J Barrett; J Kamile Rasheed; Fred C Tenover; Efrain M Ribot; Frederick J Angulo
Emergence of domestically acquired ceftriaxone-resistant Salmonella infections associated with AmpC beta-lactamase.
JAMA : the journal of the American Medical Association 2000;284(24):3151-6.
2000: Paul D Fey; Tom Safranek; Mark E Rupp; Eileen Dunne; Efrain M Ribot; Peter C Iwen; P A Bradford; Frederick J Angulo; Steven H Hinrichs
Ceftriaxone-resistant salmonella infection acquired by a child from cattle.
The New England journal of medicine 2000;342(17):1242-9.
1998: Efrain M Ribot; Frederick D Quinn; X Bai; J J Murtagh
Rapid amplification of transposon ends for the isolation, cloning and sequencing of transposon-disrupted chromosomal genes.
BioTechniques 1998;24(1):16-7, 20, 22.