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David Rice

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Publications

TOP 3
Domenech J; Baker P J; Sedelnikova S E; Rodgers H F; Rice D W; Ferrer J
Crystallization and preliminary X-ray analysis of D-2-hydroxyacid dehydrogenase from Haloferax mediterranei.
Baker Patrick J; Britton K Linda; Fisher Martin; Esclapez Julia; Pire Carmen; Bonete Maria Jose; Ferrer Juan; Rice David W
Active site dynamics in the zinc-dependent medium chain alcohol dehydrogenase superfamily.
Nyon Mun Peak; Rice David W; Berrisford John M; Hounslow Andrea M; Moir Arthur J G; Huang Huazhang; Nathan Sheila; Mahadi Nor Muhammad; Bakar Farah Diba Abu; Craven C Jeremy
Catalysis by Glomerella cingulata cutinase requires conformational cycling between the active and inactive states of its catalytic triad.

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All Publications

2009: Domenech J; Baker P J; Sedelnikova S E; Rodgers H F; Rice D W; Ferrer J
Crystallization and preliminary X-ray analysis of D-2-hydroxyacid dehydrogenase from Haloferax mediterranei.
Acta crystallographica. Section F, Structural biology and crystallization communications 2009;65(Pt 4):415-8.
2009: Baker Patrick J; Britton K Linda; Fisher Martin; Esclapez Julia; Pire Carmen; Bonete Maria Jose; Ferrer Juan; Rice David W
Active site dynamics in the zinc-dependent medium chain alcohol dehydrogenase superfamily.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(3):779-84.
2009: Nyon Mun Peak; Rice David W; Berrisford John M; Hounslow Andrea M; Moir Arthur J G; Huang Huazhang; Nathan Sheila; Mahadi Nor Muhammad; Bakar Farah Diba Abu; Craven C Jeremy
Catalysis by Glomerella cingulata cutinase requires conformational cycling between the active and inactive states of its catalytic triad.
Journal of molecular biology 2009;385(1):226-35.
2008: Haydon David J; Stokes Neil R; Ure Rebecca; Galbraith Greta; Bennett James M; Brown David R; Baker Patrick J; Barynin Vladimir V; Rice David W; Sedelnikova Sveta E; Heal Jonathan R; Sheridan Joseph M; Aiwale Sachin T; Chauhan Pramod K; Srivastava Anil; Taneja Amit; Collins Ian; Errington Jeff; Czaplewski Lloyd G
An inhibitor of FtsZ with potent and selective anti-staphylococcal activity.
Science (New York, N.Y.) 2008;321(5896):1673-5.
2008: Xu Ling; Sedelnikova Svetlana E; Baker Patrick J; Rice David W
Cloning, purification and preliminary crystallographic analysis of a putative DNA-binding membrane protein, YmfM, from Staphylococcus aureus.
Acta crystallographica. Section F, Structural biology and crystallization communications 2008;64(Pt 7):656-8.
2008: Henriquez Fiona L; Ingram Paul R; Muench Stephen P; Rice David W; Roberts Craig W
Molecular basis for resistance of acanthamoeba tubulins to all major classes of antitubulin compounds.
Antimicrobial agents and chemotherapy 2008;52(3):1133-5.
2007: Nishi Yoshisuke; Yamamoto Naoki; Shimazaki Kazuko; Takahashi-Ando Naoko; Kakinuma Hiroyuki; Jialin Sun; Ruzheinikov Sergey N; Muranova Tatyana A; Rice David W; Kajihara Yasuhiro
Mechanistic analysis of the phosphonate transition-state analogue-derived catalytic and non-catalytic antibody.
Journal of biochemistry 2007;142(4):421-33.
2007: Xu Ling; Sedelnikova Svetlana E; Baker Patrick J; Hunt Alison; Errington Jeff; Rice David W
Crystal structure of S. aureus YlaN, an essential leucine rich protein involved in the control of cell shape.
Proteins 2007;68(2):438-45.
2007: Muench Stephen P; Prigge Sean T; McLeod Rima; Rafferty John B; Kirisits Michael J; Roberts Craig W; Mui Ernest J; Rice David W
Studies of Toxoplasma gondii and Plasmodium falciparum enoyl acyl carrier protein reductase and implications for the development of antiparasitic agents.
Acta crystallographica. Section D, Biological crystallography 2007;63(Pt 3):328-38.
2007: Ferguson D J P; Campbell S A; Henriquez F L; Phan L; Mui E; Richards T A; Muench S P; Allary M; Lu J Z; Prigge S T; Tomley F; Shirley M W; Rice D W; McLeod R; Roberts C W
Enzymes of type II fatty acid synthesis and apicoplast differentiation and division in Eimeria tenella.
International journal for parasitology 2007;37(1):33-51.
2007: Roujeinikova Anna; Simon William J; Gilroy John; Rice David W; Rafferty John B; Slabas Antoni R
Structural studies of fatty acyl-(acyl carrier protein) thioesters reveal a hydrophobic binding cavity that can expand to fit longer substrates.
Journal of molecular biology 2007;365(1):135-45.
2006: Newman Joseph A; Das Sanjan K; Sedelnikova Svetlana E; Rice David W
Cloning, purification and preliminary crystallographic analysis of a putative pyridoxal kinase from Bacillus subtilis.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 10):1006-9.
2006: Newman Joseph A; Das Sanjan K; Sedelnikova Svetlana E; Rice David W
The crystal structure of an ADP complex of Bacillus subtilis pyridoxal kinase provides evidence for the parallel emergence of enzyme activity during evolution.
Journal of molecular biology 2006;363(2):520-30.
2006: Muench Stephen P; Xu Ling; Sedelnikova Svetlana E; Rice David W
The essential GTPase YphC displays a major domain rearrangement associated with nucleotide binding.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(33):12359-64.
2006: Xu Ling; Sedelnikova Svetlana E; Baker Patrick J; Rice David W
Cloning, purification and preliminary crystallographic analysis of a conserved hypothetical protein, SA0961 (YlaN), from Staphylococcus aureus.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 8):778-80.
2006: Muench Stephen P; Prigge Sean T; Zhu Liqun; Kirisits Michael J; Roberts Craig W; Wernimont Sarah; McLeod Rima; Rice David W
Expression, purification and preliminary crystallographic analysis of the Toxoplasma gondii enoyl reductase.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 6):604-6.
2006: Xu Ling; Muench Stephen P; Roujeinikova Anna; Sedelnikova Svetlana E; Rice David W
Cloning, purification and preliminary crystallographic analysis of the Bacillus subtilis GTPase YphC-GDP complex.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 5):435-7.
2006: Berrisford John M; Hounslow Andrea M; Akerboom Jasper; Hagen Wilfred R; Brouns Stan J J; van der Oost John; Murray Iain A; Michael Blackburn G; Waltho Jonathan P; Rice David W; Baker Patrick J
Evidence supporting a cis-enediol-based mechanism for Pyrococcus furiosus phosphoglucose isomerase.
Journal of molecular biology 2006;358(5):1353-66.
2006: Britton K Linda; Baker Patrick J; Fisher Martin; Ruzheinikov Sergey; Gilmour D James; Bonete María-José; Ferrer Juan; Pire Carmen; Esclapez Julia; Rice David W
Analysis of protein solvent interactions in glucose dehydrogenase from the extreme halophile Haloferax mediterranei.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(13):4846-51.
2005: Glynn Steven E; Baker Patrick J; Sedelnikova Svetlana E; Davies Claire L; Eadsforth Thomas C; Levy Colin W; Rodgers H Fiona; Blackburn G Michael; Hawkes Timothy R; Viner Russell; Rice David W
Structure and mechanism of imidazoleglycerol-phosphate dehydratase.
Structure (London, England : 1993) 2005;13(12):1809-17.
2005: Ruzheinikov Sergey N; Taal Makie A; Sedelnikova Svetlana E; Baker Patrick J; Rice David W
Substrate-induced conformational changes in Bacillus subtilis glutamate racemase and their implications for drug discovery.
Structure (London, England : 1993) 2005;13(11):1707-13.
2005: Glynn Steven E; Baker Patrick J; Sedelnikova Svetlana E; Levy Colin W; Rodgers H Fiona; Blank Jutta; Hawkes Timothy R; Rice David W
Purification, crystallization and preliminary crystallographic analysis of Arabidopsis thaliana imidazoleglycerol-phosphate dehydratase.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 8):776-8.
2005: Esclapez Julia; Britton K Linda; Baker Patrick J; Fisher Martin; Pire Carmen; Ferrer Juan; Bonete María José; Rice David W
Crystallization and preliminary X-ray analysis of binary and ternary complexes of Haloferax mediterranei glucose dehydrogenase.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 8):743-6.
2005: Ferguson David J P; Henriquez Fiona L; Kirisits Michael J; Muench Stephen P; Prigge Sean T; Rice David W; Roberts Craig W; McLeod Rima L
Maternal inheritance and stage-specific variation of the apicoplast in Toxoplasma gondii during development in the intermediate and definitive host.
Eukaryotic cell 2005;4(4):814-26.
2004: Taal Makie A; Sedelnikova Svetlana E; Ruzheinikov Sergey N; Baker Patrick J; Rice David W
Expression, purification and preliminary X-ray analysis of crystals of Bacillus subtilis glutamate racemase.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 11):2031-4.
2004: Berrisford John M; Akerboom Jasper; Brouns Stan; Sedelnikova Svetlana E; Turnbull Andrew P; van der Oost John; Salmon Laurent; Hardré Renaud; Murray Iain A; Blackburn G Michael; Rice David W; Baker Patrick J
The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis.
Journal of molecular biology 2004;343(3):649-57.
2004: Ruzheinikov Sergey N; Das Sanjan K; Sedelnikova Svetlana E; Baker Patrick J; Artymiuk Peter J; García-Lara Jorge; Foster Simon J; Rice David W
Analysis of the open and closed conformations of the GTP-binding protein YsxC from Bacillus subtilis.
Journal of molecular biology 2004;339(2):265-78.
2004: Hartley Andrew; Glynn Steven E; Barynin Vladimir; Baker Patrick J; Sedelnikova Svetlana E; Verhees Corné; de Geus Daniel; van der Oost John; Timson David J; Reece Richard J; Rice David W
Substrate specificity and mechanism from the structure of Pyrococcus furiosus galactokinase.
Journal of molecular biology 2004;337(2):387-98.
2004: Muranova Tatyana A; Ruzheinikov Sergey N; Higginbottom Adrian; Clipson Jennifer A; Blackburn G Michael; Wentworth Paul; Datta Anita; Rice David W; Partridge Lynda J
Crystallization of a carbamatase catalytic antibody Fab fragment and its complex with a transition-state analogue.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 1):172-4.
2004: Das Sanjan K; Sedelnikova Svetlana E; Baker Patrick J; Ruzheinikov Sergey N; Foster Simon J; Rice David W
Expression, purification, crystallization and preliminary crystallographic analysis of a putative GTP-binding protein, YsxC, from Bacillus subtilis.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 1):166-8.
2003: Rafferty John B; Bolt Edward L; Muranova Tatyana A; Sedelnikova Svetlana E; Leonard Philip; Pasquo Alessandra; Baker Patrick J; Rice David W; Sharples Gary J; Lloyd Robert G
The structure of Escherichia coli RusA endonuclease reveals a new Holliday junction DNA binding fold.
Structure (London, England : 1993) 2003;11(12):1557-67.
2003: Seah Stephen Y K; Britton K Linda; Rice David W; Asano Yasuhisa; Engel Paul C
Kinetic analysis of phenylalanine dehydrogenase mutants designed for aliphatic amino acid dehydrogenase activity with guidance from homology-based modelling.
European journal of biochemistry / FEBS 2003;270(23):4628-34.
2003: Samuel B U; Hearn B; Mack D; Wender P; Rothbard J; Kirisits M J; Mui E; Wernimont S; Roberts C W; Muench S P; Rice D W; Prigge S T; Law A B; McLeod R
Delivery of antimicrobials into parasites.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(24):14281-6.
2003: Akerboom Jasper; Turnbull Andrew P; Hargreaves David; Fisher Martin; de Geus Daniel; Sedelnikova Svetlana E; Berrisford John M; Baker Patrick J; Verhees Corne H; van der Oost John; Rice David W
Purification, crystallization and preliminary crystallographic analysis of phosphoglucose isomerase from the hyperthermophilic archaeon Pyrococcus furiosus.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 10):1822-3.
2003: de Geus Daniel; Hartley Andrew P; Sedelnikova Svetlana E; Glynn Steven E; Baker Patrick J; Verhees Corné H; van der Oost John; Rice David W
Cloning, purification, crystallization and preliminary crystallographic analysis of galactokinase from Pyrococcus furiosus.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 10):1819-21.
2003: Ruzheinikov Sergey N; Muranova Tatyana A; Sedelnikova Svetlana E; Partridge Lynda J; Blackburn G Michael; Murray Iain A; Kakinuma Hiroyuki; Takahashi-Ando Naoko; Shimazaki Kazuko; Sun Jilian; Nishi Yoshisuke; Rice David W
High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity.
Journal of molecular biology 2003;332(2):423-35.
2003: Berrisford John M; Akerboom Jasper; Turnbull Andrew P; de Geus Daniel; Sedelnikova Svetlana E; Staton Ian; McLeod Cameron W; Verhees Corne H; van der Oost John; Rice David W; Baker Patrick J
Crystal structure of Pyrococcus furiosus phosphoglucose isomerase. Implications for substrate binding and catalysis.
The Journal of biological chemistry 2003;278(35):33290-7.
2003: Muench Stephen P; Rafferty John B; McLeod Rima; Rice David W; Prigge Sean T
Expression, purification and crystallization of the Plasmodium falciparum enoyl reductase.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 7):1246-8.
2003: Irwin Jane A; Lynch Susan V; Coughlan Suzie; Baker Patrick J; Gudmundsson Haflidi M; Alfredsson Gudni A; Rice David W; Engel Paul C
Alanine dehydrogenase from the psychrophilic bacterium strain PA-43: overexpression, molecular characterization, and sequence analysis.
Extremophiles : life under extreme conditions 2003;7(2):135-43.
2002: Aunpad Ratchaneewan; Muench Stephen P; Baker Patrick J; Sedelnikova Svetlana; Panbangred Watanalai; Doukyu Noriyuki; Aono Rikizo; Rice David W
Crystallization and preliminary X-ray crystallographic studies on the class II cholesterol oxidase from Burkholderia cepacia containing bound flavin.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 12):2182-3.
2002: Mehanni M M; Turnbull A P; Sedelnikova S E; Baker P J; Foster S; Rice D W
Crystallization and preliminary X-ray analysis of the ytxM gene product from Bacillus subtilis.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 12):2138-40.
2002: Slabas Antoni R; Kroon Johan T M; Scheirer Ted P; Gilroy John S; Hayman Matthew; Rice David W; Turnbull Andy P; Rafferty John B; Fawcett Tony; Simon William J
Squash glycerol-3-phosphate (1)-acyltransferase. Alteration of substrate selectivity and identification of arginine and lysine residues important in catalytic activity.
The Journal of biological chemistry 2002;277(46):43918-23.
2002: Seah Stephen Y K; Britton K Linda; Rice David W; Asano Yasuhisa; Engel Paul C
Single amino acid substitution in Bacillus sphaericus phenylalanine dehydrogenase dramatically increases its discrimination between phenylalanine and tyrosine substrates.
Biochemistry 2002;41(38):11390-7.
2002: Roujeinikova Anna; Raasch Carsten; Sedelnikova Svetlana; Liebl Wolfgang; Rice David W
Crystal structure of Thermotoga maritima 4-alpha-glucanotransferase and its acarbose complex: implications for substrate specificity and catalysis.
Journal of molecular biology 2002;321(1):149-62.
2002: Roujeinikova Anna; Baldock Clair; Simon William J; Gilroy John; Baker Patrick J; Stuitje Antoine R; Rice David W; Slabas Antoni R; Rafferty John B
X-ray crystallographic studies on butyryl-ACP reveal flexibility of the structure around a putative acyl chain binding site.
Structure (London, England : 1993) 2002;10(6):825-35.
2002: Muranova Tatyana A; Ruzheinikov Sergey N; Sedelnikova Svetlana E; Baker Patrick J; Pasquo Alessandra; Galkin Andrey; Esaki Nobuyoshi; Ohshima Toshihisa; Soda Kenji; Rice David W
Crystallization and preliminary X-ray analysis of substrate complexes of leucine dehydrogenase from Thermoactinomyces intermedius.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 6 Pt 2):1059-62.
2002: Hargreaves David; Giraldo Rafael; Santos-Sierra Sandra; Boelens Rolf; Rice David W; Díaz Orejas Ramón; Rafferty John B
Crystallization and preliminary X-ray crystallographic studies on the parD-encoded protein Kid from Escherichia coli plasmid R1.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 2):355-8.
2002: Roujeinikova Anna; Baldock Clair; Simon William J; Gilroy John; Baker Patrick J; Stuitje Antoine R; Rice David W; Rafferty John B; Slabas Antoni R
Crystallization and preliminary X-ray crystallographic studies on acyl-(acyl carrier protein) from Escherichia coli.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 2):330-2.
2002: Levy C W; Buckley P A; Sedelnikova S; Kato Y; Asano Y; Rice D W; Baker P J
Insights into enzyme evolution revealed by the structure of methylaspartate ammonia lyase.
Structure (London, England : 1993) 2002;10(1):105-13.
2001: Levy C W; Buckley P A; Baker P J; Sedelnikova S; Rodgers F; Li Y F; Kato Y; Asano Y; Rice D W
Crystallization and preliminary X-ray analysis of Citrobacter amalonaticus methylaspartate ammonia lyase.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 12):1922-4.
2001: Ferrer J; Fisher M; Burke J; Sedelnikova S E; Baker P J; Gilmour D J; Bonete M J; Pire C; Esclapez J; Rice D W
Crystallization and preliminary X-ray analysis of glucose dehydrogenase from Haloferax mediterranei.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 12):1887-9.
2001: Wang X G; Britton K L; Stillman T J; Rice D W; Engel P C
Conversion of a glutamate dehydrogenase into methionine/norleucine dehydrogenase by site-directed mutagenesis.
European journal of biochemistry / FEBS 2001;268(22):5791-9.
2001: Ruzheinikov S N; Das S K; Sedelnikova S E; Hartley A; Foster S J; Horsburgh M J; Cox A G; McCleod C W; Mekhalfia A; Blackburn G M; Rice D W; Baker P J
The 1.2 A structure of a novel quorum-sensing protein, Bacillus subtilis LuxS.
Journal of molecular biology 2001;313(1):111-22.
2001: Ruzheinikov S N; Burke J; Sedelnikova S; Baker P J; Taylor R; Bullough P A; Muir N M; Gore M G; Rice D W
Glycerol dehydrogenase. structure, specificity, and mechanism of a family III polyol dehydrogenase.
Structure (London, England : 1993) 2001;9(9):789-802.
2001: Roujeinikova A; Raasch C; Burke J; Baker P J; Liebl W; Rice D W
The crystal structure of Thermotoga maritima maltosyltransferase and its implications for the molecular basis of the novel transfer specificity.
Journal of molecular biology 2001;312(1):119-31.
2001: Das S K; Sedelnikova S E; Baker P J; Ruzheinikov S N; Foster S; Hartley A; Horsburgh M J; Rice D W
Cloning, purification, crystallization and preliminary crystallographic analysis of Bacillus subtilis LuxS.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 9):1324-5.
2001: Britton K L; Abeysinghe I S; Baker P J; Barynin V; Diehl P; Langridge S J; McFadden B A; Sedelnikova S E; Stillman T J; Weeradechapon K; Rice D W
The structure and domain organization of Escherichia coli isocitrate lyase.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 9):1209-18.
2001: Muranova T A; Ruzheinikov S N; Sedelnikova S E; Moir A; Partridge L J; Kakinuma H; Takahashi N; Shimazaki K; Sun J; Nishi Y; Rice D W
The preparation and crystallization of Fab fragments of a family of mouse esterolytic catalytic antibodies and their complexes with a transition-state analogue.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 8):1192-5.
2001: Roujeinikova A; Raasch C; Sedelnikova S; Liebl W; Rice D W
Crystallization and preliminary X-ray crystallographic studies on 4-alpha-glucanotransferase from Thermotoga maritima.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 7):1046-7.
2001: Sedelnikova S E; Smits S H; Leonard P M; Brinkman A B; van der Oost J; Rafferty J B; Rice D W
Crystallization and quaternary structure analysis of an Lrp-like regulatory protein from the hyperthermophile Pyrococcus furiosus.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 6):886-8.
2001: Levy C W; Baldock C; Wallace A J; Sedelnikova S; Viner R C; Clough J M; Stuitje A R; Slabas A R; Rice D W; Rafferty J B
A study of the structure-activity relationship for diazaborine inhibition of Escherichia coli enoyl-ACP reductase.
Journal of molecular biology 2001;309(1):171-80.
2001: Turnbull A P; Rafferty J B; Sedelnikova S E; Slabas A R; Schierer T P; Kroon J T; Simon J W; Fawcett T; Nishida I; Murata N; Rice D W
Analysis of the structure, substrate specificity, and mechanism of squash glycerol-3-phosphate (1)-acyltransferase.
Structure (London, England : 1993) 2001;9(5):347-53.
2001: Leonard P M; Smits S H; Sedelnikova S E; Brinkman A B; de Vos W M; van der Oost J; Rice D W; Rafferty J B
Crystal structure of the Lrp-like transcriptional regulator from the archaeon Pyrococcus furiosus.
The EMBO journal 2001;20(5):990-7.
2001: Turnbull A P; Rafferty J B; Sedelnikova S E; Slabas A R; Schierer T P; Kroon J T; Nishida I; Murata N; Simon J W; Rice D W
Crystallization and preliminary X-ray analysis of the glycerol-3-phosphate 1-acyltransferase from squash (Cucurbita moschata).
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 3):451-3.
2001: McLeod R; Muench S P; Rafferty J B; Kyle D E; Mui E J; Kirisits M J; Mack D G; Roberts C W; Samuel B U; Lyons R E; Dorris M; Milhous W K; Rice D W
Triclosan inhibits the growth of Plasmodium falciparum and Toxoplasma gondii by inhibition of apicomplexan Fab I.
International journal for parasitology 2001;31(2):109-13.
2001: Clements J M; Beckett R P; Brown A; Catlin G; Lobell M; Palan S; Thomas W; Whittaker M; Wood S; Salama S; Baker P J; Rodgers H F; Barynin V; Rice D W; Hunter M G
Antibiotic activity and characterization of BB-3497, a novel peptide deformylase inhibitor.
Antimicrobial agents and chemotherapy 2001;45(2):563-70.
2001: Coughlan S; Wang X G; Britton K L; Stillman T J; Rice D W; Chiaraluce R; Consalvi V; Scandurra R; Engel P C
Contribution of an aspartate residue, D114, in the active site of clostridial glutamate dehydrogenase to the enzyme's unusual pH dependence.
Biochimica et biophysica acta 2001;1544(1-2):10-7.
2001: Burke J; Ruzheinikov S N; Sedelnikova S; Baker P J; Holmes D; Muir N M; Gore M G; Rice D W
Purification, crystallization and quaternary structure analysis of a glycerol dehydrogenase S305C mutant from Bacillus stearothermophilus.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 1):165-7.
2000: Hayman M W; Fawcett T; Schierer T F; Simon J W; Kroon J T; Gilroy J S; Rice D W; Rafferty J; Turnbull A P; Sedelnikova S E; Slabas A R
Mutagenesis of squash (Cucurbita moschata) glycerol-3-phosphate acyltransferase (GPAT) to produce an enzyme with altered substrate selectivity.
Biochemical Society transactions 2000;28(6):680-1.
2000: Sedelnikova S E; Burke J; Buckley P A; Rice D W; Jackson J B; Cotton N P; Grimley R L; Baker P J
Crystallization of the dI component of transhydrogenase, a proton-translocating membrane protein.
Acta crystallographica. Section D, Biological crystallography 2000;56(Pt 9):1170-2.
2000: Buckley P A; Baz Jackson J; Schneider T; White S A; Rice D W; Baker P J
Protein-protein recognition, hydride transfer and proton pumping in the transhydrogenase complex.
Structure (London, England : 1993) 2000;8(8):809-15.
2000: Burke J; Roujeinikova A; Baker P J; Sedelnikova S; Raasch C; Liebl W; Rice D W
Crystallization and preliminary X-ray crystallographic studies on maltosyltransferase from Thermotoga maritima.
Acta crystallographica. Section D, Biological crystallography 2000;56(Pt 8):1049-50.
2000: Britton K; Langridge S; Baker P J; Weeradechapon K; Sedelnikova S E; De Lucas J R; Rice D W; Turner G
The crystal structure and active site location of isocitrate lyase from the fungus Aspergillus nidulans.
Structure (London, England : 1993) 2000;8(4):349-62.
1999: Roujeinikova A; Levy C W; Rowsell S; Sedelnikova S; Baker P J; Minshull C A; Mistry A; Colls J G; Camble R; Stuitje A R; Slabas A R; Rafferty J B; Pauptit R A; Viner R; Rice D W
Crystallographic analysis of triclosan bound to enoyl reductase.
Journal of molecular biology 1999;294(2):527-35.
1999: Britton K L; Yip K S; Sedelnikova S E; Stillman T J; Adams M W; Ma K; Maeder D L; Robb F T; Tolliday N; Vetriani C; Rice D W; Baker P J
Structure determination of the glutamate dehydrogenase from the hyperthermophile Thermococcus litoralis and its comparison with that from Pyrococcus furiosus.
Journal of molecular biology 1999;293(5):1121-32.
1999: Roujeinikova A; Sedelnikova S; de Boer G J; Stuitje A R; Slabas A R; Rafferty J B; Rice D W
Inhibitor binding studies on enoyl reductase reveal conformational changes related to substrate recognition.
The Journal of biological chemistry 1999;274(43):30811-7.
1999: Levy C W; Roujeinikova A; Sedelnikova S; Baker P J; Stuitje A R; Slabas A R; Rice D W; Rafferty J B
Molecular basis of triclosan activity.
Nature 1999;398(6726):383-4.
1999: Hargreaves D; Rafferty J B; Sedelnikova S E; Lloyd R G; Rice D W
Crystallization of Escherichia coli RuvA complexed with a synthetic Holliday junction.
Acta crystallographica. Section D, Biological crystallography 1999;55(Pt 1):263-5.
1999: de Boer G J; Pielage G J; Nijkamp H J; Slabas A R; Rafferty J B; Baldock C; Rice D W; Stuitje A R
Molecular genetic analysis of enoyl-acyl carrier protein reductase inhibition by diazaborine.
Molecular microbiology 1999;31(2):443-50.
1999: Stillman T J; Migueis A M; Wang X G; Baker P J; Britton K L; Engel P C; Rice D W
Insights into the mechanism of domain closure and substrate specificity of glutamate dehydrogenase from Clostridium symbiosum.
Journal of molecular biology 1999;285(2):875-85.
1998: Baldock C; Rafferty J B; Stuitje A R; Slabas A R; Rice D W
The X-ray structure of Escherichia coli enoyl reductase with bound NAD+ at 2.1 A resolution.
Journal of molecular biology 1998;284(5):1529-46.
1998: Vetriani C; Maeder D L; Tolliday N; Yip K S; Stillman T J; Britton K L; Rice D W; Klump H H; Robb F T
Protein thermostability above 100 degreesC: a key role for ionic interactions.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(21):12300-5.
1998: Yip K S; Britton K L; Stillman T J; Lebbink J; de Vos W M; Robb F T; Vetriani C; Maeder D; Rice D W
Insights into the molecular basis of thermal stability from the analysis of ion-pair networks in the glutamate dehydrogenase family.
European journal of biochemistry / FEBS 1998;255(2):336-46.
1998: Britton K L; Asano Y; Rice D W
Crystal structure and active site location of N-(1-D-carboxylethyl)-L-norvaline dehydrogenase.
Nature structural biology 1998;5(7):593-601.
1998: Baker P J; Sawa Y; Shibata H; Sedelnikova S E; Rice D W
Analysis of the structure and substrate binding of Phormidium lapideum alanine dehydrogenase.
Nature structural biology 1998;5(7):561-7.
1998: Hargreaves D; Rice D W; Sedelnikova S E; Artymiuk P J; Lloyd R G; Rafferty J B
Crystal structure of E.coli RuvA with bound DNA Holliday junction at 6 A resolution.
Nature structural biology 1998;5(6):441-6.
1998: Rafferty J B; Fisher M; Langridge S J; Martindale W; Thomas N C; Simon J W; Bithell S; Slabas A R; Rice D W
Crystallization of the NADP-dependent beta-keto acyl carrier protein reductase from Escherichia coli.
Acta crystallographica. Section D, Biological crystallography 1998;54(Pt 3):427-9.
1998: Sedelnikova S; Rice D W; Shibata H; Sawa Y; Baker P J
Crystallization of the alanine dehydrogenase from Phormidium lapideum.
Acta crystallographica. Section D, Biological crystallography 1998;54(Pt 3):407-8.
1998: Baldock C; de Boer G J; Rafferty J B; Stuitje A R; Rice D W
Mechanism of action of diazaborines.
Biochemical pharmacology 1998;55(10):1541-9.
1998: Rafferty J B; Ingleston S M; Hargreaves D; Artymiuk P J; Sharples G J; Lloyd R G; Rice D W
Structural similarities between Escherichia coli RuvA protein and other DNA-binding proteins and a mutational analysis of its binding to the holliday junction.
Journal of molecular biology 1998;278(1):105-16.
1998: Millevoi S; Pasquo A; Chiaraluce R; Consalvi V; Giangiacomo L; Britton K L; Stillman T J; Rice D W; Engel P C
A monomeric mutant of Clostridium symbiosum glutamate dehydrogenase: comparison with a structured monomeric intermediate obtained during refolding.
Protein science : a publication of the Protein Society 1998;7(4):966-74.
1998: Britton K L; Stillman T J; Yip K S; Forterre P; Engel P C; Rice D W
Insights into the molecular basis of salt tolerance from the study of glutamate dehydrogenase from Halobacterium salinarum.
The Journal of biological chemistry 1998;273(15):9023-30.
1998: Pasquo A; Britton K L; Baker P J; Brearley G; Hinton R J; Moir A J; Stillman T J; Rice D W
Crystallization of NAD+-dependent phenylalanine dehydrogenase from Nocardia sp239.
Acta crystallographica. Section D, Biological crystallography 1998;54(Pt 2):269-72.
1997: Baker P J; Waugh M L; Wang X G; Stillman T J; Turnbull A P; Engel P C; Rice D W
Determinants of substrate specificity in the superfamily of amino acid dehydrogenases.
Biochemistry 1997;36(51):16109-15.
1997: Poirrette A R; Artymiuk P J; Rice D W; Willett P
Comparison of protein surfaces using a genetic algorithm.
Journal of computer-aided molecular design 1997;11(6):557-69.
1997: Turnbull A P; Baker P J; Rice D W
Analysis of the quaternary structure, substrate specificity, and catalytic mechanism of valine dehydrogenase.
The Journal of biological chemistry 1997;272(40):25105-11.
1997: Langridge S J; Baker P J; DeLucas J R; Sedelnikova S E; Turner G; Rice D W
Isocitrate lyase from Aspergillus nidulans: crystallization and X-ray analysis of a glyoxylate cycle enzyme.
Acta crystallographica. Section D, Biological crystallography 1997;53(Pt 4):488-90.
1997: Hempstead P D; Yewdall S J; Fernie A R; Lawson D M; Artymiuk P J; Rice D W; Ford G C; Harrison P M
Comparison of the three-dimensional structures of recombinant human H and horse L ferritins at high resolution.
Journal of molecular biology 1997;268(2):424-48.
1997: Wilkinson K W; Ford G C; Moir A J; Rice D W; Rodgers H F; Smith J M; Stillman T J; Goward C R
Crystallization of cytochrome b562 from Erwinia chrysanthemi.
Acta crystallographica. Section D, Biological crystallography 1997;53(Pt 2):197-9.
1997: Sedelnikova S E; Rafferty J B; Hargreaves D; Mahdi A A; Lloyd R G; Rice D W
Crystallization of E. coli RuvA gives insights into the symmetry of a Holliday junction/protein complex.
Acta crystallographica. Section D, Biological crystallography 1997;53(Pt 1):122-4.
1997: Dean J L; Cölfen H; Harding S E; Rice D W; Engel P C
Alteration of the quaternary structure of glutamate dehydrogenase from Clostridium symbiosum by a single mutation distant from the subunit interfaces.
European biophysics journal : EBJ 1997;25(5-6):417-22.
1996: Baldock C; Rafferty J B; Sedelnikova S E; Baker P J; Stuitje A R; Slabas A R; Hawkes T R; Rice D W
A mechanism of drug action revealed by structural studies of enoyl reductase.
Science (New York, N.Y.) 1996;274(5295):2107-10.
1996: Sedelnikova S E; Yip K S; Stillman T J; Ma K; Adams M W; Robb F T; Rice D W
Crystallization of the glutamate dehydrogenase from the hyperthermophilic archaeon Thermococcus litoralis.
Acta crystallographica. Section D, Biological crystallography 1996;52(Pt 6):1185-7.
1996: Baldock C; Rafferty J B; Sedelnikova S E; Bithell S; Stuitje A R; Slabas A R; Rice D W
Crystallization of Escherichia coli enoyl reductase and its complex with diazaborine.
Acta crystallographica. Section D, Biological crystallography 1996;52(Pt 6):1181-4.
1996: Pasquo A; Britton K L; Stillman T J; Rice D W; Cölfen H; Harding S E; Scandurra R; Engel P C
Construction of a dimeric form of glutamate dehydrogenase from Clostridium symbiosum by site-directed mutagenesis.
Biochimica et biophysica acta 1996;1297(2):149-58.
1996: Rafferty J B; Sedelnikova S E; Hargreaves D; Artymiuk P J; Baker P J; Sharples G J; Mahdi A A; Lloyd R G; Rice D W
Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction.
Science (New York, N.Y.) 1996;274(5286):415-21.
1996: Rice D W; Yip K S; Stillman T J; Britton K L; Fuentes A; Connerton I; Pasquo A; Scandura R; Engel P C
Insights into the molecular basis of thermal stability from the structure determination of Pyrococcus furiosus glutamate dehydrogenase.
FEMS microbiology reviews 1996;18(2-3):105-17.
1996: Coughlan S; Wang X G; Britton K L; Stillman T J; Rice D W; Engel P C
Preliminary functional studies of mutant D114N of Clostridium symbiosum glutamate dehydrogenase.
Biochemical Society transactions 1996;24(1):149S.
1996: Artymiuk P J; Poirrette A R; Rice D W; Willett P
Biotin carboxylase comes into the fold.
Nature structural biology 1996;3(2):128-32.
1995: Wilkinson K W; Baker P J; Rice D W; Rodgers H F; Stillman T J; Hawkes T; Thomas P; Edwards L
Crystallization and analysis of the subunit assembly and quaternary structure of imidazoleglycerol phosphate dehydratase from Saccharomyces cerevisiae.
Acta crystallographica. Section D, Biological crystallography 1995;51(Pt 5):845-7.
1995: Stillman T J; Yip K S; Rice D W; Fuentes A M; Connerton I
Crystallization and preliminary X-ray analysis of the NADP-specific glutamate dehydrogenase from Neurospora crassa.
Acta crystallographica. Section D, Biological crystallography 1995;51(Pt 5):837-9.
1995: Wilkinson K W; Baker P J; Rice D W; Stillman T J; Gore M G; Krauss O; Atkinson T
Crystallization of glycerol dehydrogenase from Bacillus stearothermophilus.
Acta crystallographica. Section D, Biological crystallography 1995;51(Pt 5):830-2.
1995: Rafferty J B; Simon J W; Baldock C; Artymiuk P J; Baker P J; Stuitje A R; Slabas A R; Rice D W
Common themes in redox chemistry emerge from the X-ray structure of oilseed rape (Brassica napus) enoyl acyl carrier protein reductase.
Structure (London, England : 1993) 1995;3(9):927-38.
1995: Baker P J; Turnbull A P; Sedelnikova S E; Stillman T J; Rice D W
A role for quaternary structure in the substrate specificity of leucine dehydrogenase.
Structure (London, England : 1993) 1995;3(7):693-705.
1995: Britton K L; Baker P J; Borges K M; Engel P C; Pasquo A; Rice D W; Robb F T; Scandurra R; Stillman T J; Yip K S
Insights into thermal stability from a comparison of the glutamate dehydrogenases from Pyrococcus furiosus and Thermococcus litoralis.
European journal of biochemistry / FEBS 1995;229(3):688-95.
1995: Yip K S; Baker P J; Britton K L; Engel P C; Rice D W; Sedelnikova S E; Stillman T J; Pasquo A; Chiaraluce R; Consalvi V; Scandurra R
Crystallization of the NAD(P)-dependent glutamate dehydrogenase from the hyperthermophile Pyrococcus furiosus.
Acta crystallographica. Section D, Biological crystallography 1995;51(Pt 2):240-2.
1995: Hawkes T R; Thomas P G; Edwards L S; Rayner S J; Wilkinson K W; Rice D W
Purification and characterization of the imidazoleglycerol-phosphate dehydratase of Saccharomyces cerevisiae from recombinant Escherichia coli.
The Biochemical journal 1995;306 ( Pt 2)():385-97.
1995: Teller J K; Baker P J; Britton K L; Engel P C; Rice D W; Stillman T J
Correlation of intron-exon organisation with the three-dimensional structure in glutamate dehydrogenase.
Biochimica et biophysica acta 1995;1247(2):231-8.
1995: Artymiuk P J; Rice D W; Poirrette A R; Willett P
beta-Glucosyltransferase and phosphorylase reveal their common theme.
Nature structural biology 1995;2(2):117-20.
1995: Wang X G; Britton K L; Baker P J; Martin S; Rice D W; Engel P C
Alteration of the amino acid substrate specificity of clostridial glutamate dehydrogenase by site-directed mutagenesis of an active-site lysine residue.
Protein engineering 1995;8(2):147-52.
1994: Artymiuk P J; Rice D W; Poirrette A R; Willet P
A tale of two synthetases.
Nature structural biology 1994;1(11):758-60.
1994: Artymiuk P J; Poirrette A R; Grindley H M; Rice D W; Willett P
A graph-theoretic approach to the identification of three-dimensional patterns of amino acid side-chains in protein structures.
Journal of molecular biology 1994;243(2):327-44.
1994: Wang X G; Dean J L; Engel P C; Baker P J; Britton K L; Stillman T J; Rice D W
The changed pattern of substrate specificity in the K89L mutant of glutamate dehydrogenase of Clostridium symbiosum.
Biochemical Society transactions 1994;22(3):320S.
1994: Dean J L; Wang X G; Teller J K; Waugh M L; Britton K L; Baker P J; Stillman T J; Martin S R; Rice D W; Engel P C
The catalytic role of aspartate in the active site of glutamate dehydrogenase.
The Biochemical journal 1994;301 ( Pt 1)():13-6.
1994: Poirrette A R; Artymiuk P J; Grindley H M; Rice D W; Willett P
Structural similarity between binding sites in influenza sialidase and isocitrate dehydrogenase: implications for an alternative approach to rational drug design.
Protein science : a publication of the Protein Society 1994;3(7):1128-30.
1994: Rafferty J B; Simon J W; Stuitje A R; Slabas A R; Fawcett T; Rice D W
Crystallization of the NADH-specific enoyl acyl carrier protein reductase from Brassica napus.
Journal of molecular biology 1994;237(2):240-2.
1994: Turnbull A P; Ashford S R; Baker P J; Rice D W; Rodgers F H; Stillman T J; Hanson R L
Crystallization and quaternary structure analysis of the NAD(+)-dependent leucine dehydrogenase from Bacillus sphaericus.
Journal of molecular biology 1994;236(2):663-5.
1993: Britton K L; Baker P J; Engel P C; Rice D W; Stillman T J
Evolution of substrate diversity in the superfamily of amino acid dehydrogenases. Prospects for rational chiral synthesis.
Journal of molecular biology 1993;234(4):938-45.
1993: Stillman T J; Baker P J; Britton K L; Rice D W
Conformational flexibility in glutamate dehydrogenase. Role of water in substrate recognition and catalysis.
Journal of molecular biology 1993;234(4):1131-9.
1993: Artymiuk P J; Grindley H M; Kumar K; Rice D W; Willett P
Three-dimensional structural resemblance between the ribonuclease H and connection domains of HIV reverse transcriptase and the ATPase fold revealed using graph theoretical techniques.
FEBS letters 1993;324(1):15-21.
1993: Grindley H M; Artymiuk P J; Rice D W; Willett P
Identification of tertiary structure resemblance in proteins using a maximal common subgraph isomorphism algorithm.
Journal of molecular biology 1993;229(3):707-21.
1992: Nunn R S; Artymiuk P J; Baker P J; Rice D W; Hunter C N
Purification and crystallization of the light harvesting LH1 complex from Rhodobacter sphaeroides.
Journal of molecular biology 1992;228(4):1259-62.
1992: Artymiuk P J; Bath P A; Grindley H M; Pepperrell C A; Poirrette A R; Rice D W; Thorner D A; Wild D J; Willett P; Allen F H
Similarity searching in databases of three-dimensional molecules and macromolecules.
Journal of chemical information and computer sciences 1992;32(6):617-30.
1992: Baker P J; Britton K L; Rice D W; Rob A; Stillman T J
Structural consequences of sequence patterns in the fingerprint region of the nucleotide binding fold. Implications for nucleotide specificity.
Journal of molecular biology 1992;228(2):662-71.
1992: Britton K L; Baker P J; Rice D W; Stillman T J
Structural relationship between the hexameric and tetrameric family of glutamate dehydrogenases.
European journal of biochemistry / FEBS 1992;209(3):851-9.
1992: Artymiuk P J; Grindley H M; Park J E; Rice D W; Willett P
Three-dimensional structural resemblance between leucine aminopeptidase and carboxypeptidase A revealed by graph-theoretical techniques.
FEBS letters 1992;303(1):48-52.
1992: Stillman T J; Baker P J; Britton K L; Rice D W; Rodgers H F
Effect of additives on the crystallization of glutamate dehydrogenase from Clostridium symbiosum. Evidence for a ligand-induced conformational change.
Journal of molecular biology 1992;224(4):1181-4.
1992: Baker P J; Britton K L; Engel P C; Farrants G W; Lilley K S; Rice D W; Stillman T J
Subunit assembly and active site location in the structure of glutamate dehydrogenase.
Proteins 1992;12(1):75-86.
1991: Lilley K S; Baker P J; Britton K L; Stillman T J; Brown P E; Moir A J; Engel P C; Rice D W; Bell J E; Bell E
The partial amino acid sequence of the NAD(+)-dependent glutamate dehydrogenase of Clostridium symbiosum: implications for the evolution and structural basis of coenzyme specificity.
Biochimica et biophysica acta 1991;1080(3):191-7.
1991: Abeysinghe S I; Baker P J; Rice D W; Rodgers H F; Stillman T J; Ko Y H; McFadden B A; Nimmo H G
Use of chemical modification in the crystallization of isocitrate lyase from Escherichia coli.
Journal of molecular biology 1991;220(1):13-6.
1990: Artymiuk P J; Rice D W; Mitchell E M; Willett P
Structural resemblance between the families of bacterial signal-transduction proteins and of G proteins revealed by graph theoretical techniques.
Protein engineering 1990;4(1):39-43.
1990: Mitchell E M; Artymiuk P J; Rice D W; Willett P
Use of techniques derived from graph theory to compare secondary structure motifs in proteins.
Journal of molecular biology 1990;212(1):151-66.
1987: Baker P J; Farrants G W; Rice D W; Stillman T J
Recent progress on the structure and function of glutamate dehydrogenase.
Biochemical Society transactions 1987;15(4):748-51.
1987: Harrison P M; Ford G C; Rice D W; Smith J M; Treffry A; White J L
Structural and functional studies on ferritins.
Biochemical Society transactions 1987;15(4):744-8.
1984: Ford G C; Harrison P M; Rice D W; Smith J M; Treffry A; White J L; Yariv J
Ferritin: design and formation of an iron-storage molecule.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 1984;304(1121):551-65.

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