Username

Password

Forgot Password?

Preview

Sign-in free and Explore the Exciting World of BiomedExperts:

Over 1.500.000 Profiles
More than 1.800 Organizations worldwide
State of the Art Network Visualizations

Manage your own Profile
Locate Experts in your Country/Region
Locate Experts in your 1. and 2. Level Network
Connect to Experts Worldwide

NetworkView

Donald Rio

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Living Beings

Chemicals & Drugs

Physiology

Concepts & Ideas

Molecular Sequence Data

Genes & Molecular Sequences

Sign-in to see full Profile

Network (preview)

Co-Publications
Name
10
Kanaar, R
8
Rudner, DZ
7
Beall, Eileen
7
Blanchette, Marco
6
Adams, Melissa
6
Rubin, Gerald
5
Tjian, Robert
5
Green, Richard
5
Brenner, Steven
4
Labourier, Emmanuel
4
Weinert, Brian
3
Wemmer, David
3
Roche, S
3
Breger, KS
2
Lareau, Liana

Sign-in to see all Coauthors

Publications

TOP 3
Hansen Kasper Daniel; Lareau Liana F; Blanchette Marco; Green Richard E; Meng Qi; Rehwinkel Jan; Gallusser Fabian L; Izaurralde Elisa; Rio Donald C; Dudoit Sandrine; Brenner Steven E
Genome-wide identification of alternative splice forms down-regulated by nonsense-mediated mRNA decay in Drosophila.
Blanchette Marco; Green Richard E; MacArthur Stewart; Brooks Angela N; Brenner Steven E; Eisen Michael B; Rio Donald C
Genome-wide analysis of alternative pre-mRNA splicing and RNA-binding specificities of the Drosophila hnRNP A/B family members.
Sharma Shalini; Kohlstaedt Lori A; Damianov Andrey; Rio Donald C; Black Douglas L
Polypyrimidine tract binding protein controls the transition from exon definition to an intron defined spliceosome.

Sign-in to see all Publications

Sign in free and see...

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the visualized research activity
of experts around the globe

Sign-in to see more

Geonetwork of Donald Rio (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

Sign-in to see more

All Publications

2009: Hansen Kasper Daniel; Lareau Liana F; Blanchette Marco; Green Richard E; Meng Qi; Rehwinkel Jan; Gallusser Fabian L; Izaurralde Elisa; Rio Donald C; Dudoit Sandrine; Brenner Steven E
Genome-wide identification of alternative splice forms down-regulated by nonsense-mediated mRNA decay in Drosophila.
PLoS genetics 2009;5(6):e1000525.
2009: Blanchette Marco; Green Richard E; MacArthur Stewart; Brooks Angela N; Brenner Steven E; Eisen Michael B; Rio Donald C
Genome-wide analysis of alternative pre-mRNA splicing and RNA-binding specificities of the Drosophila hnRNP A/B family members.
Molecular cell 2009;33(4):438-49.
2008: Sharma Shalini; Kohlstaedt Lori A; Damianov Andrey; Rio Donald C; Black Douglas L
Polypyrimidine tract binding protein controls the transition from exon definition to an intron defined spliceosome.
Nature structural & molecular biology 2008;15(2):183-91.
2007: Huang Shirley H; Rio Donald C; Marletta Michael A
Ligand binding and inhibition of an oxygen-sensitive soluble guanylate cyclase, Gyc-88E, from Drosophila.
Biochemistry 2007;46(51):15115-22.
2007: Tang Mei; Cecconi Ciro; Bustamante Carlos; Rio Donald C
Analysis of P element transposase protein-DNA interactions during the early stages of transposition.
The Journal of biological chemistry 2007;282(39):29002-12.
2007: Weinert Brian T; Rio Donald C
DNA strand displacement, strand annealing and strand swapping by the Drosophila Bloom's syndrome helicase.
Nucleic acids research 2007;35(4):1367-76.
2006: Chmiel Nikolas H; Rio Donald C; Doudna Jennifer A
Distinct contributions of KH domains to substrate binding affinity of Drosophila P-element somatic inhibitor protein.
RNA (New York, N.Y.) 2006;12(2):283-91.
2005: Remus Dirk; Blanchette Marco; Rio Donald C; Botchan Michael R
CDK phosphorylation inhibits the DNA-binding and ATP-hydrolysis activities of the Drosophila origin recognition complex.
The Journal of biological chemistry 2005;280(48):39740-51.
2005: Chen Li; Lullo Dennis J; Ma Enbo; Celniker Susan E; Rio Donald C; Doudna Jennifer A
Identification and analysis of U5 snRNA variants in Drosophila.
RNA (New York, N.Y.) 2005;11(10):1473-7.
2005: Tang Mei; Cecconi Ciro; Kim Helen; Bustamante Carlos; Rio Donald C
Guanosine triphosphate acts as a cofactor to promote assembly of initial P-element transposase-DNA synaptic complexes.
Genes & development 2005;19(12):1422-5.
2005: Blanchette Marco; Green Richard E; Brenner Steven E; Rio Donald C
Global analysis of positive and negative pre-mRNA splicing regulators in Drosophila.
Genes & development 2005;19(11):1306-14.
2005: Weinert Brian T; Min Bosun; Rio Donald C
P element excision and repair by non-homologous end joining occurs in both G1 and G2 of the cell cycle.
DNA repair 2005;4(2):171-81.
2004: Chen Li; Rio Donald C; Haddad Gabriel G; Ma Enbo
Regulatory role of dADAR in ROS metabolism in Drosophila CNS.
Brain research. Molecular brain research 2004;131(1-2):93-100.
2004: Blanchette Marco; Labourier Emmanuel; Green Richard E; Brenner Steven E; Rio Donald C
Genome-wide analysis reveals an unexpected function for the Drosophila splicing factor U2AF50 in the nuclear export of intronless mRNAs.
Molecular cell 2004;14(6):775-86.
2004: Min Bosun; Weinert Brian T; Rio Donald C
Interplay between Drosophila Bloom's syndrome helicase and Ku autoantigen during nonhomologous end joining repair of P element-induced DNA breaks.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(24):8906-11.
2004: Brodsky Michael H; Weinert Brian T; Tsang Garson; Rong Yikang S; McGinnis Nadine M; Golic Kent G; Rio Donald C; Rubin Gerald M
Drosophila melanogaster MNK/Chk2 and p53 regulate multiple DNA repair and apoptotic pathways following DNA damage.
Molecular and cellular biology 2004;24(3):1219-31.
2003: Green Richard E; Lewis Benjamin P; Hillman R Tyler; Blanchette Marco; Lareau Liana F; Garnett Aaron T; Rio Donald C; Brenner Steven E
Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes.
Bioinformatics (Oxford, England) 2003;19 Suppl 1():i118-21.
2002: Beall Eileen L; Mahoney Matthew B; Rio Donald C
Identification and analysis of a hyperactive mutant form of Drosophila P-element transposase.
Genetics 2002;162(1):217-27.
2002: Rio Donald
Half-pint: alternative splicing in the Drosophila ovary.
Molecular cell 2002;9(3):456-7.
2002: Labourier Emmanuel; Blanchette Marco; Feiger Jennie W; Adams Melissa D; Rio Donald C
The KH-type RNA-binding protein PSI is required for Drosophila viability, male fertility, and cellular mRNA processing.
Genes & development 2002;16(1):72-84.
2001: Amarasinghe A K; MacDiarmid R; Adams M D; Rio D C
An in vitro-selected RNA-binding site for the KH domain protein PSI acts as a splicing inhibitor element.
RNA (New York, N.Y.) 2001;7(9):1239-53.
2001: Labourier E; Adams M D; Rio D C
Modulation of P-element pre-mRNA splicing by a direct interaction between PSI and U1 snRNP 70K protein.
Molecular cell 2001;8(2):363-73.
2001: Labourier E; Rio D C
Purification of Drosophila snRNPs and characterization of two populations of functional U1 particles.
RNA (New York, N.Y.) 2001;7(3):457-70.
1999: Rio D C
Trans-silencing by P elements inserted in subtelomeric heterochromatin involves the Drosophila polycomb group gene, Enhancer of zeste.
Genetics 1999;153(1):507.
1999: Crowder S M; Kanaar R; Rio D C; Alber T
Absence of interdomain contacts in the crystal structure of the RNA recognition motifs of Sex-lethal.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(9):4892-7.
1998: Roche S E; Rio D C
Trans-silencing by P elements inserted in subtelomeric heterochromatin involves the Drosophila Polycomb group gene, Enhancer of zeste.
Genetics 1998;149(4):1839-55.
1998: Lee C C; Beall E L; Rio D C
DNA binding by the KP repressor protein inhibits P-element transposase activity in vitro.
The EMBO journal 1998;17(14):4166-74.
1998: Rudner D Z; Breger K S; Kanaar R; Adams M D; Rio D C
RNA binding activity of heterodimeric splicing factor U2AF: at least one RS domain is required for high-affinity binding.
Molecular and cellular biology 1998;18(7):4004-11.
1998: Rudner D Z; Breger K S; Rio D C
Molecular genetic analysis of the heterodimeric splicing factor U2AF: the RS domain on either the large or small Drosophila subunit is dispensable in vivo.
Genes & development 1998;12(7):1010-21.
1998: Rudner D Z; Kanaar R; Breger K S; Rio D C
Interaction between subunits of heterodimeric splicing factor U2AF is essential in vivo.
Molecular and cellular biology 1998;18(4):1765-73.
1998: Beall E L; Rio D C
Transposase makes critical contacts with, and is stimulated by, single-stranded DNA at the P element termini in vitro.
The EMBO journal 1998;17(7):2122-36.
1997: Hammond L E; Rudner D Z; Kanaar R; Rio D C
Mutations in the hrp48 gene, which encodes a Drosophila heterogeneous nuclear ribonucleoprotein particle protein, cause lethality and developmental defects and affect P-element third-intron splicing in vivo.
Molecular and cellular biology 1997;17(12):7260-7.
1997: Lee A L; Volkman B F; Robertson S A; Rudner D Z; Barbash D A; Cline T W; Kanaar R; Rio D C; Wemmer D E
Chemical shift mapping of the RNA-binding interface of the multiple-RBD protein sex-lethal.
Biochemistry 1997;36(47):14306-17.
1997: Beall E L; Rio D C
Drosophila P-element transposase is a novel site-specific endonuclease.
Genes & development 1997;11(16):2137-51.
1997: Mul Y M; Rio D C
Reprogramming the purine nucleotide cofactor requirement of Drosophila P element transposase in vivo.
The EMBO journal 1997;16(14):4441-7.
1997: Barnes G; Rio D
DNA double-strand-break sensitivity, DNA replication, and cell cycle arrest phenotypes of Ku-deficient Saccharomyces cerevisiae.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(3):867-72.
1997: Adams M D; Tarng R S; Rio D C
The alternative splicing factor PSI regulates P-element third intron splicing in vivo.
Genes & development 1997;11(1):129-38.
1996: Lee C C; Mul Y M; Rio D C
The Drosophila P-element KP repressor protein dimerizes and interacts with multiple sites on P-element DNA.
Molecular and cellular biology 1996;16(10):5616-22.
1996: Rudner D Z; Kanaar R; Breger K S; Rio D C
Mutations in the small subunit of the Drosophila U2AF splicing factor cause lethality and developmental defects.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(19):10333-7.
1996: Adams M D; Rudner D Z; Rio D C
Biochemistry and regulation of pre-mRNA splicing.
Current opinion in cell biology 1996;8(3):331-9.
1996: Beall E L; Rio D C
Drosophila IRBP/Ku p70 corresponds to the mutagen-sensitive mus309 gene and is involved in P-element excision in vivo.
Genes & development 1996;10(8):921-33.
1995: Kanaar R; Lee A L; Rudner D Z; Wemmer D E; Rio D C
Interaction of the sex-lethal RNA binding domains with RNA.
The EMBO journal 1995;14(18):4530-9.
1995: Roche S E; Schiff M; Rio D C
P-element repressor autoregulation involves germ-line transcriptional repression and reduction of third intron splicing.
Genes & development 1995;9(10):1278-88.
1995: Siebel C W; Admon A; Rio D C
Soma-specific expression and cloning of PSI, a negative regulator of P element pre-mRNA splicing.
Genes & development 1995;9(3):269-83.
1994: Beall E L; Admon A; Rio D C
A Drosophila protein homologous to the human p70 Ku autoimmune antigen interacts with the P transposable element inverted repeats.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(26):12681-5.
1994: Lee A L; Kanaar R; Rio D C; Wemmer D E
Resonance assignments and solution structure of the second RNA-binding domain of sex-lethal determined by multidimensional heteronuclear magnetic resonance.
Biochemistry 1994;33(46):13775-86.
1994: Siebel C W; Kanaar R; Rio D C
Regulation of tissue-specific P-element pre-mRNA splicing requires the RNA-binding protein PSI.
Genes & development 1994;8(14):1713-25.
1993: Misra S; Buratowski R M; Ohkawa T; Rio D C
Cytotype control of Drosophila melanogaster P element transposition: genomic position determines maternal repression.
Genetics 1993;135(3):785-800.
1993: Kanaar R; Roche S E; Beall E L; Green M R; Rio D C
The conserved pre-mRNA splicing factor U2AF from Drosophila: requirement for viability.
Science (New York, N.Y.) 1993;262(5133):569-73.
1993: Rio D C
Splicing of pre-mRNA: mechanism, regulation and role in development.
Current opinion in genetics & development 1993;3(4):574-84.
1992: Siebel C W; Fresco L D; Rio D C
The mechanism of somatic inhibition of Drosophila P-element pre-mRNA splicing: multiprotein complexes at an exon pseudo-5' splice site control U1 snRNP binding.
Genes & development 1992;6(8):1386-401.
1992: Rio D C
RNA processing.
Current opinion in cell biology 1992;4(3):444-52.
1992: Kaufman P D; Rio D C
P element transposition in vitro proceeds by a cut-and-paste mechanism and uses GTP as a cofactor.
Cell 1992;69(1):27-39.
1992: Rio D C
RNA binding proteins, splice site selection, and alternative pre-mRNA splicing.
Gene expression 1992;2(1):1-5.
1991: Frankel A D; Mattaj I W; Rio D C
RNA-protein interactions.
Cell 1991;67(6):1041-6.
1991: Kaufman P D; Rio D C
Germline transformation of Drosophila melanogaster by purified P element transposase.
Nucleic acids research 1991;19(22):6336.
1991: Rio D C
Regulation of Drosophila P element transposition.
Trends in genetics : TIG 1991;7(9):282-7.
1991: Kaufman P D; Rio D C
Drosophila P-element transposase is a transcriptional repressor in vitro.
Proceedings of the National Academy of Sciences of the United States of America 1991;88(7):2613-7.
1990: Misra S; Rio D C
Cytotype control of Drosophila P element transposition: the 66 kd protein is a repressor of transposase activity.
Cell 1990;62(2):269-84.
1990: Siebel C W; Rio D C
Regulated splicing of the Drosophila P transposable element third intron in vitro: somatic repression.
Science (New York, N.Y.) 1990;248(4960):1200-8.
1990: Rio D C
Molecular mechanisms regulating Drosophila P element transposition.
Annual review of genetics 1990;24():543-78.
1989: Kaufman P D; Doll R F; Rio D C
Drosophila P element transposase recognizes internal P element DNA sequences.
Cell 1989;59(2):359-71.
1989: Mullins M C; Rio D C; Rubin G M
cis-acting DNA sequence requirements for P-element transposition.
Genes & development 1989;3(5):729-38.
1989: Doll R F; Kaufman P D; Misra S; Rio D C
Molecular biology of Drosophila P-element transposition.
Progress in nucleic acid research and molecular biology 1989;36():47-57.
1988: Rio D C; Rubin G M
Identification and purification of a Drosophila protein that binds to the terminal 31-base-pair inverted repeats of the P transposable element.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(23):8929-33.
1988: Rio D C
Accurate and efficient pre-mRNA splicing in Drosophila cell-free extracts.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(9):2904-8.
1988: Rio D C; Barnes G; Laski F A; Rine J; Rubin G M
Evidence for Drosophila P element transposase activity in mammalian cells and yeast.
Journal of molecular biology 1988;200(2):411-5.
1986: Robbins P D; Rio D C; Botchan M R
trans Activation of the simian virus 40 enhancer.
Molecular and cellular biology 1986;6(4):1283-95.
1986: Laski F A; Rio D C; Rubin G M
Tissue specificity of Drosophila P element transposition is regulated at the level of mRNA splicing.
Cell 1986;44(1):7-19.
1986: Rio D C; Laski F A; Rubin G M
Identification and immunochemical analysis of biologically active Drosophila P element transposase.
Cell 1986;44(1):21-32.
1985: Rio D C; Rubin G M
Transformation of cultured Drosophila melanogaster cells with a dominant selectable marker.
Molecular and cellular biology 1985;5(8):1833-8.
1985: Rio D C; Clark S G; Tjian R
A mammalian host-vector system that regulates expression and amplification of transfected genes by temperature induction.
Science (New York, N.Y.) 1985;227(4682):23-8.
1985: Rubin G M; Hazelrigg T; Karess R E; Laski F A; Laverty T; Levis R; Rio D C; Spencer F A; Zuker C S
Germ line specificity of P-element transposition and some novel patterns of expression of transduced copies of the white gene.
Cold Spring Harbor symposia on quantitative biology 1985;50():329-35.
1984: Rio D C; Tjian R
Multiple control elements involved in the initiation of SV40 late transcription.
Journal of molecular and applied genetics 1984;2(5):423-35.
1983: Rio D C; Tjian R
SV40 T antigen binding site mutations that affect autoregulation.
Cell 1983;32(4):1227-40.
1981: Myers R M; Rio D C; Robbins A K; Tjian R
SV40 gene expression is modulated by the cooperative binding of T antigen to DNA.
Cell 1981;25(2):373-84.
1980: Rio D; Robbins A; Myers R; Tjian R
Regulation of simian virus 40 early transcription in vitro by a purified tumor antigen.
Proceedings of the National Academy of Sciences of the United States of America 1980;77(10):5706-10.

Sign-in to see more