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Noah Rosenberg
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Research Profile (preview)
Occupations
Concepts & Ideas
Chemicals & Drugs
Genes & Molecular Sequences
Physiology
Phenomena
Disorders
Living Beings
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Network (preview)
9
Jakobsson, Mattias
9
Pritchard, Jonathan
9
salathe, marcel
5
Zhivotovsky, Lev
3
Weber, James
3
Nordborg, Magnus
3
Hillel, Jossi
3
Blum, Michael
2
Hardy, John
2
Calabrese, Peter
2
Cavalli-Sforza, Luca
2
Lavi, Uri
2
Osipova, Ludmila
2
Wall, Jeffrey
2
Zhadanov, Sergey
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Geonetwork of Noah Rosenberg (preview)
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All Publications
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2009: Huang Lucy; Wang Chaolong; Rosenberg Noah A
The Relationship between Imputation Error and Statistical Power in Genetic Association Studies in Diverse Populations.
American journal of human genetics 2009;85(5):692-8.
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2009: DeGiorgio Michael; Jakobsson Mattias; Rosenberg Noah A
Out of Africa: modern human origins special feature: explaining worldwide patterns of human genetic variation using a coalescent-based serial founder model of migration outward from Africa.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(38):16057-62.
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2009: Rosenberg Noah A; Vanliere Jenna M
Replication of genetic associations as pseudoreplication due to shared genealogy.
Genetic epidemiology 2009;33(6):479-87.
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2009: Degnan James H; Rosenberg Noah A
Gene tree discordance, phylogenetic inference and the multispecies coalescent.
Trends in ecology & evolution (Personal edition) 2009;24(6):332-40.
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2009: Schroeder Kari B; Jakobsson Mattias; Crawford Michael H; Schurr Theodore G; Boca Simina M; Conrad Donald F; Tito Raul Y; Osipova Ludmilla P; Tarskaia Larissa A; Zhadanov Sergey I; Wall Jeffrey D; Pritchard Jonathan K; Malhi Ripan S; Smith David G; Rosenberg Noah A
Haplotypic background of a private allele at high frequency in the Americas.
Molecular biology and evolution 2009;26(5):995-1016.
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2009: DeGiorgio Michael; Rosenberg Noah A
An unbiased estimator of gene diversity in samples containing related individuals.
Molecular biology and evolution 2009;26(3):501-12.
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2009: Huang Lucy; Li Yun; Singleton Andrew B; Hardy John A; Abecasis Gonçalo; Rosenberg Noah A; Scheet Paul
Genotype-imputation accuracy across worldwide human populations.
American journal of human genetics 2009;84(2):235-50.
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2008: Ramachandran Sohini; Rosenberg Noah A; Feldman Marcus W; Wakeley John
Population differentiation and migration: coalescence times in a two-sex island model for autosomal and X-linked loci.
Theoretical population biology 2008;74(4):291-301.
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2008: Szpiech Zachary A; Jakobsson Mattias; Rosenberg Noah A
ADZE: a rarefaction approach for counting alleles private to combinations of populations.
Bioinformatics (Oxford, England) 2008;24(21):2498-504.
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2008: Rosenberg Noah A; Jakobsson Mattias
The relationship between homozygosity and the frequency of the most frequent allele.
Genetics 2008;179(4):2027-36.
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2008: VanLiere Jenna M; Rosenberg Noah A
Mathematical properties of the r2 measure of linkage disequilibrium.
Theoretical population biology 2008;74(1):130-7.
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2008: Pemberton T J; Jakobsson M; Conrad D F; Coop G; Wall J D; Pritchard J K; Patel P I; Rosenberg N A
Using population mixtures to optimize the utility of genomic databases: linkage disequilibrium and association study design in India.
Annals of human genetics 2008;72(Pt 4):535-46.
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2008: Macpherson J Michael; González Josefa; Witten Daniela M; Davis Jerel C; Rosenberg Noah A; Hirsh Aaron E; Petrov Dmitri A
Nonadaptive explanations for signatures of partial selective sweeps in Drosophila.
Molecular biology and evolution 2008;25(6):1025-42.
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2008: François Olivier; Blum Michael G B; Jakobsson Mattias; Rosenberg Noah A
Demographic history of european populations of Arabidopsis thaliana.
PLoS genetics 2008;4(5):e1000075.
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2008: Rosenberg Noah A; Tao Randa
Discordance of species trees with their most likely gene trees: the case of five taxa.
Systematic biology 2008;57(1):131-40.
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2008: Jakobsson Mattias; Scholz Sonja W; Scheet Paul; Gibbs J Raphael; VanLiere Jenna M; Fung Hon-Chung; Szpiech Zachary A; Degnan James H; Wang Kai; Guerreiro Rita; Bras Jose M; Schymick Jennifer C; Hernandez Dena G; Traynor Bryan J; Simon-Sanchez Javier; Matarin Mar; Britton Angela; van de Leemput Joyce; Rafferty Ian; Bucan Maja; Cann Howard M; Hardy John A; Rosenberg Noah A; Singleton Andrew B
Genotype, haplotype and copy-number variation in worldwide human populations.
Nature 2008;451(7181):998-1003.
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2007: Zhang Kangyu; Rosenberg Noah A
On the genealogy of a duplicated microsatellite.
Genetics 2007;177(4):2109-22.
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2007: Wang Sijia; Lewis Cecil M; Jakobsson Mattias; Ramachandran Sohini; Ray Nicolas; Bedoya Gabriel; Rojas Winston; Parra Maria V; Molina Julio A; Gallo Carla; Mazzotti Guido; Poletti Giovanni; Hill Kim; Hurtado Ana M; Labuda Damian; Klitz William; Barrantes Ramiro; Bortolini Maria Cátira; Salzano Francisco M; Petzl-Erler Maria Luiza; Tsuneto Luiza T; Llop Elena; Rothhammer Francisco; Excoffier Laurent; Feldman Marcus W; Rosenberg Noah A; Ruiz-Linares Andrés
Genetic variation and population structure in native Americans.
PLoS genetics 2007;3(11):e185.
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2007: Jakobsson Mattias; Rosenberg Noah A
CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure.
Bioinformatics (Oxford, England) 2007;23(14):1801-6.
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2007: Blum Michael G B; Rosenberg Noah A
Estimating the number of ancestral lineages using a maximum-likelihood method based on rejection sampling.
Genetics 2007;176(3):1741-57.
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2007: Rosenberg Noah A; Blum Michael G B
Sampling properties of homozygosity-based statistics for linkage disequilibrium.
Mathematical biosciences 2007;208(1):33-47.
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2007: Jakobsson Mattias; Rosenberg Noah A
The probability distribution under a population divergence model of the number of genetic founding lineages of a population or species.
Theoretical population biology 2007;71(4):502-23.
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2007: David Lior; Rosenberg Noah A; Lavi Uri; Feldman Marcus W; Hillel Jossi
Genetic diversity and population structure inferred from the partially duplicated genome of domesticated carp, Cyprinus carpio L.
Genetics, selection, evolution : GSE 2007;39(3):319-40.
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2007: Rosenberg Noah A
Counting coalescent histories.
Journal of computational biology : a journal of computational molecular cell biology 2007;14(3):360-77.
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2007: Schroeder K B; Schurr T G; Long J C; Rosenberg N A; Crawford M H; Tarskaia L A; Osipova L P; Zhadanov S I; Smith D G
A private allele ubiquitous in the Americas.
Biology letters 2007;3(2):218-23.
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2007: Rosenberg Noah A
Statistical tests for taxonomic distinctiveness from observations of monophyly.
Evolution; international journal of organic evolution 2007;61(2):317-23.
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2006: Rosenberg Noah A; Mahajan Saurabh; Gonzalez-Quevedo Catalina; Blum Michael G B; Nino-Rosales Laura; Ninis Vasiliki; Das Parimal; Hegde Madhuri; Molinari Laura; Zapata Gladys; Weber James L; Belmont John W; Patel Pragna I
Low levels of genetic divergence across geographically and linguistically diverse populations from India.
PLoS genetics 2006;2(12):e215.
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2006: Conrad Donald F; Jakobsson Mattias; Coop Graham; Wen Xiaoquan; Wall Jeffrey D; Rosenberg Noah A; Pritchard Jonathan K
A worldwide survey of haplotype variation and linkage disequilibrium in the human genome.
Nature genetics 2006;38(11):1251-60.
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2006: Rosenberg Noah A
Standardized subsets of the HGDP-CEPH Human Genome Diversity Cell Line Panel, accounting for atypical and duplicated samples and pairs of close relatives.
Annals of human genetics 2006;70(Pt 6):841-7.
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2006: Rosenberg Noah A; Nordborg Magnus
A general population-genetic model for the production by population structure of spurious genotype-phenotype associations in discrete, admixed or spatially distributed populations.
Genetics 2006;173(3):1665-78.
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2006: Degnan James H; Rosenberg Noah A
Discordance of species trees with their most likely gene trees.
PLoS genetics 2006;2(5):e68.
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2005: Rosenberg Noah A; Mahajan Saurabh; Ramachandran Sohini; Zhao Chengfeng; Pritchard Jonathan K; Feldman Marcus W
Clines, clusters, and the effect of study design on the inference of human population structure.
PLoS genetics 2005;1(6):e70.
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2005: Rosenberg Noah A
Algorithms for selecting informative marker panels for population assignment.
Journal of computational biology : a journal of computational molecular cell biology 2005;12(9):1183-201.
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2005: Ramachandran Sohini; Deshpande Omkar; Roseman Charles C; Rosenberg Noah A; Feldman Marcus W; Cavalli-Sforza L Luca
Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(44):15942-7.
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2005: Rosenberg Noah A
A sharp minimum on the mean number of steps taken in adaptive walks.
Journal of theoretical biology 2005;237(1):17-22.
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2005: Nordborg Magnus; Hu Tina T; Ishino Yoko; Jhaveri Jinal; Toomajian Christopher; Zheng Honggang; Bakker Erica; Calabrese Peter; Gladstone Jean; Goyal Rana; Jakobsson Mattias; Kim Sung; Morozov Yuri; Padhukasahasram Badri; Plagnol Vincent; Rosenberg Noah A; Shah Chitiksha; Wall Jeffrey D; Wang Jue; Zhao Keyan; Kalbfleisch Theodore; Schulz Vincent; Kreitman Martin; Bergelson Joy
The pattern of polymorphism in Arabidopsis thaliana.
PLoS biology 2005;3(7):e196.
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2005: Innan Hideki; Zhang Kangyu; Marjoram Paul; Tavaré Simon; Rosenberg Noah A
Statistical tests of the coalescent model based on the haplotype frequency distribution and the number of segregating sites.
Genetics 2005;169(3):1763-77.
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2004: Rosenberg Noah A; Calabrese Peter P
Polyploid and multilocus extensions of the Wahlund inequality.
Theoretical population biology 2004;66(4):381-91.
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2004: Tanaka Mark M; Rosenberg Noah A; Small Peter M
The control of copy number of IS6110 in Mycobacterium tuberculosis.
Molecular biology and evolution 2004;21(12):2195-201.
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2004: Ramachandran Sohini; Rosenberg Noah A; Zhivotovsky Lev A; Feldman Marcus W
Robustness of the inference of human population structure: a comparison of X-chromosomal and autosomal microsatellites.
Human genomics 2004;1(2):87-97.
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2003: Horton Richard; Rosenberg Noah A; Pritchard Jonathan K; Weber James L; Cann Howard M; Kidd Kenneth K; Zhivotovsky Lev A; Feldman Marcus W
Read all about it: The Lancet's Paper of the Year, 2003.
Lancet 2003;362(9401):2101-3.
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2003: Rosenberg Noah A; Li Lei M; Ward Ryk; Pritchard Jonathan K
Informativeness of genetic markers for inference of ancestry.
American journal of human genetics 2003;73(6):1402-22.
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2003: Rosenberg Noah A; Hirsh Aaron E
On the use of star-shaped genealogies in inference of coalescence times.
Genetics 2003;164(4):1677-82.
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2003: Rosenberg Noah A
The shapes of neutral gene genealogies in two species: probabilities of monophyly, paraphyly, and polyphyly in a coalescent model.
Evolution; international journal of organic evolution 2003;57(7):1465-77.
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2003: Rosenberg Noah A; Tsolaki Anthony G; Tanaka Mark M
Estimating change rates of genetic markers using serial samples: applications to the transposon IS6110 in Mycobacterium tuberculosis.
Theoretical population biology 2003;63(4):347-63.
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2003: Zhivotovsky Lev A; Rosenberg Noah A; Feldman Marcus W
Features of evolution and expansion of modern humans, inferred from genomewide microsatellite markers.
American journal of human genetics 2003;72(5):1171-86.
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2002: Rosenberg Noah A; Pritchard Jonathan K; Weber James L; Cann Howard M; Kidd Kenneth K; Zhivotovsky Lev A; Feldman Marcus W
Genetic structure of human populations.
Science (New York, N.Y.) 2002;298(5602):2381-5.
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2002: Rosenberg Noah A; Nordborg Magnus
Genealogical trees, coalescent theory and the analysis of genetic polymorphisms.
Nature reviews. Genetics 2002;3(5):380-90.
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2002: Rosenberg Noah A
The probability of topological concordance of gene trees and species trees.
Theoretical population biology 2002;61(2):225-47.
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2001: Rosenberg N A; Burke T; Elo K; Feldman M W; Freidlin P J; Groenen M A; Hillel J; Mäki-Tanila A; Tixier-Boichard M; Vignal A; Wimmers K; Weigend S
Empirical evaluation of genetic clustering methods using multilocus genotypes from 20 chicken breeds.
Genetics 2001;159(2):699-713.
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2001: Tanaka M M; Rosenberg N A
Optimal estimation of transposition rates of insertion sequences for molecular epidemiology.
Statistics in medicine 2001;20(16):2409-20.
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2001: Rosenberg N A; Woolf E; Pritchard J K; Schaap T; Gefel D; Shpirer I; Lavi U; Bonne-Tamir B; Hillel J; Feldman M W
Distinctive genetic signatures in the Libyan Jews.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(3):858-63.
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2000: Pritchard J K; Stephens M; Rosenberg N A; Donnelly P
Association mapping in structured populations.
American journal of human genetics 2000;67(1):170-81.
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2000: Jin L; Baskett M L; Cavalli-Sforza L L; Zhivotovsky L A; Feldman M W; Rosenberg N A
Microsatellite evolution in modern humans: a comparison of two data sets from the same populations.
Annals of human genetics 2000;64(Pt 2):117-34.
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1999: Pritchard J K; Rosenberg N A
Use of unlinked genetic markers to detect population stratification in association studies.
American journal of human genetics 1999;65(1):220-8.
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