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Lucia Rothman-Denes

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Publications

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Michael L Gleghorn; Elena K Davydova; Ritwika Basu; Lucia B Rothman-Denes; Katsuhiko S Murakami
X-ray crystal structures elucidate the nucleotidyl transfer reaction of transcript initiation using two nucleotides.
Sho T Yano; Lucia B Rothman-Denes
A phage-encoded inhibitor of Escherichia coli DNA replication targets the DNA polymerase clamp loader.
Elena K Davydova; Irene Kaganman; Krystyna M Kazmierczak; Lucia B Rothman-Denes
Identification of bacteriophage N4 virion RNA polymerase-nucleic acid interactions in transcription complexes.

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All Publications

2011: Michael L Gleghorn; Elena K Davydova; Ritwika Basu; Lucia B Rothman-Denes; Katsuhiko S Murakami
X-ray crystal structures elucidate the nucleotidyl transfer reaction of transcript initiation using two nucleotides.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(9):3566-71.
2011: Sho T Yano; Lucia B Rothman-Denes
A phage-encoded inhibitor of Escherichia coli DNA replication targets the DNA polymerase clamp loader.
Molecular microbiology 2011;79(5):1325-38.
2009: Elena K Davydova; Irene Kaganman; Krystyna M Kazmierczak; Lucia B Rothman-Denes
Identification of bacteriophage N4 virion RNA polymerase-nucleic acid interactions in transcription complexes.
The Journal of biological chemistry 2009;284(4):1962-70.
2009: Jennifer McPartland; Lucia B Rothman-Denes
The tail sheath of bacteriophage N4 interacts with the Escherichia coli receptor.
Journal of bacteriology 2009;191(2):525-32.
2008: Michael L Gleghorn; Elena K Davydova; Lucia B Rothman-Denes; Katsuhiko S Murakami
Structural basis for DNA-hairpin promoter recognition by the bacteriophage N4 virion RNA polymerase.
Molecular cell 2008;32(5):707-17.
2008: Kyung H Choi; Jennifer McPartland; Irene Kaganman; valorie bowman; Lucia B Rothman-Denes; Michael G Rossmann
Insight into DNA and protein transport in double-stranded DNA viruses: the structure of bacteriophage N4.
Journal of molecular biology 2008;378(3):726-36.
2008: Katsuhiko S Murakami; Elena K Davydova; Lucia B Rothman-Denes
X-ray crystal structure of the polymerase domain of the bacteriophage N4 virion RNA polymerase.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(13):5046-51.
2008: Lucia B Rothman-Denes; Claude Parsot
Cell regulation.
Current opinion in microbiology 2008;11(2):75-7.
2007: Elena K Davydova; Thomas J Santangelo; Lucia B Rothman-Denes
Bacteriophage N4 virion RNA polymerase interaction with its promoter DNA hairpin.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(17):7033-8.
2007: Emina A Stojković; Lucia B Rothman-Denes
Coliphage N4 N-acetylmuramidase defines a new family of murein hydrolases.
Journal of molecular biology 2007;366(2):406-19.
2003: Richard H Carter; Alexander A Demidenko; Susan Hattingh-Willis; Lucia B Rothman-Denes
Phage N4 RNA polymerase II recruitment to DNA by a single-stranded DNA-binding protein.
Genes & development 2003;17(18):2334-45.
2003: Elena K Davydova; Lucia B Rothman-Denes
Escherichia coli single-stranded DNA-binding protein mediates template recycling during transcription by bacteriophage N4 virion RNA polymerase.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(16):9250-5.
2003: Elena K Davydova; Krystyna M Kazmierczak; Lucia B Rothman-Denes
Bacteriophage N4-coded, virion-encapsulated DNA-dependent RNA polymerase.
Methods in enzymology 2003;370():83-94.
2002: Krystyna M Kazmierczak; Elena K Davydova; A A Mustaev; Lucia B Rothman-Denes
The phage N4 virion RNA polymerase catalytic domain is related to single-subunit RNA polymerases.
The EMBO journal 2002;21(21):5815-23.
2002: S H Willis; Krystyna M Kazmierczak; R H Carter; Lucia B Rothman-Denes
N4 RNA polymerase II, a heterodimeric RNA polymerase with homology to the single-subunit family of RNA polymerases.
Journal of bacteriology 2002;184(18):4952-61.
1999: Xing Dai; Lucia B Rothman-Denes
DNA structure and transcription.
Current opinion in microbiology 1999;2(2):126-30.
1998: Xing Dai; Lucia B Rothman-Denes
Sequence and DNA structural determinants of N4 virion RNA polymerase-promoter recognition.
Genes & development 1998;12(17):2782-90.
1998: Lucia B Rothman-Denes; Xing Dai; Elena K Davydova; R Carter; Krystyna M Kazmierczak
Transcriptional regulation by DNA structural transitions and single-stranded DNA-binding proteins.
Cold Spring Harbor symposia on quantitative biology 1998;63():63-73.
1998: Xing Dai; M Kloster; Lucia B Rothman-Denes
Sequence-dependent extrusion of a small DNA hairpin at the N4 virion RNA polymerase promoters.
Journal of molecular biology 1998;283(1):43-58.
1997: Xing Dai; M B Greizerstein; K Nadas-Chinni; Lucia B Rothman-Denes
Supercoil-induced extrusion of a regulatory DNA hairpin.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(6):2174-9.
1997: A Miller; D Wood; Richard H. Ebright; Lucia B Rothman-Denes
RNA polymerase beta' subunit: a target of DNA binding-independent activation.
Science (New York, N.Y.) 1997;275(5306):1655-7.
1996: M A Glucksmann-Kuis; Xing Dai; P Markiewicz; Lucia B Rothman-Denes
E. coli SSB activates N4 virion RNA polymerase promoters by stabilizing a DNA hairpin required for promoter recognition.
Cell 1996;84(1):147-54.
1996: A Miller; Xing Dai; M Choi; M A Glucksmann-Kuis; Lucia B Rothman-Denes
Single-stranded DNA-binding proteins as transcriptional activators.
Methods in enzymology 1996;274():9-20.
1995: M Choi; A Miller; N Y Cho; Lucia B Rothman-Denes
Identification, cloning, and characterization of the bacteriophage N4 gene encoding the single-stranded DNA-binding protein. A protein required for phage replication, recombination, and late transcription.
The Journal of biological chemistry 1995;270(38):22541-7.
1995: N Y Cho; M Choi; Lucia B Rothman-Denes
The bacteriophage N4-coded single-stranded DNA-binding protein (N4SSB) is the transcriptional activator of Escherichia coli RNA polymerase at N4 late promoters.
Journal of molecular biology 1995;246(4):461-71.
1993: D R Kiino; M S Singer; Lucia B Rothman-Denes
Two overlapping genes encoding membrane proteins required for bacteriophage N4 adsorption.
Journal of bacteriology 1993;175(21):7081-5.
1993: D R Kiino; R Licudine; K Wilt; D H Yang; Lucia B Rothman-Denes
A cytoplasmic protein, NfrC, is required for bacteriophage N4 adsorption.
Journal of bacteriology 1993;175(21):7074-80.
1992: P Markiewicz; C Malone; J W Chase; Lucia B Rothman-Denes
Escherichia coli single-stranded DNA-binding protein is a supercoiled template-dependent transcriptional activator of N4 virion RNA polymerase.
Genes & development 1992;6(10):2010-9.
1992: M A Glucksmann; P Markiewicz; C Malone; Lucia B Rothman-Denes
Specific sequences and a hairpin structure in the template strand are required for N4 virion RNA polymerase promoter recognition.
Cell 1992;70(3):491-500.
1990: K Abravaya; Lucia B Rothman-Denes
N4 RNA polymerase II sites of transcription initiation.
Journal of molecular biology 1990;211(2):359-72.
1989: D R Kiino; Lucia B Rothman-Denes
Genetic analysis of bacteriophage N4 adsorption.
Journal of bacteriology 1989;171(9):4595-602.
1989: G Lindberg; S C Kowalczykowski; J K Rist; Akio Sugino; Lucia B Rothman-Denes
Purification and characterization of the coliphage N4-coded single-stranded DNA binding protein.
The Journal of biological chemistry 1989;264(21):12700-8.
1989: K Abravaya; Lucia B Rothman-Denes
In vitro requirements for N4 RNA polymerase II-specific initiation.
The Journal of biological chemistry 1989;264(21):12695-9.
1988: G K Lindberg; J K Rist; T A Kunkel; Akio Sugino; Lucia B Rothman-Denes
Purification and characterization of bacteriophage N4-induced DNA polymerase.
The Journal of biological chemistry 1988;263(23):11319-26.
1988: P Markiewicz; A Glucksmann; Lucia B Rothman-Denes
N4 virion DNA dependent-RNA polymerase: initiation sequences utilized by the enzyme on heterologous templates.
Nucleic acids research 1988;16(3):1011-26.
1988: C Malone; S Spellman; D Hyman; Lucia B Rothman-Denes
Cloning and generation of a genetic map of bacteriophage N4 DNA.
Virology 1988;162(2):328-36.
1986: D Guinta; G Lindberg; Lucia B Rothman-Denes
Bacteriophage N4-coded 5'----3' exonuclease. Purification and characterization.
The Journal of biological chemistry 1986;261(23):10736-43.
1986: J K Rist; M Pearle; Akio Sugino; Lucia B Rothman-Denes
Development of an in vitro bacteriophage N4 DNA replication system.
The Journal of biological chemistry 1986;261(23):10506-10.
1986: D Guinta; J Stambouly; S C Falco; J K Rist; Lucia B Rothman-Denes
Host and phage-coded functions required for coliphage N4 DNA replication.
Virology 1986;150(1):33-44.
1983: W A Zehring; Lucia B Rothman-Denes
Purification and characterization of coliphage N4 RNA polymerase II activity from infected cell extracts.
The Journal of biological chemistry 1983;258(13):8074-80.
1983: W A Zehring; S C Falco; C Malone; Lucia B Rothman-Denes
Bacteriophage N4-induced transcribing activities in E. coli. III. A third cistron required for N4 RNA polymerase II activity.
Virology 1983;126(2):678-87.
1981: R Zivin; W Zehring; Lucia B Rothman-Denes
Transcriptional map of bacteriophage N4. Location and polarity of N4 RNAs.
Journal of molecular biology 1981;152(2):335-56.
1980: R Zivin; C Malone; Lucia B Rothman-Denes
Physical map of coliphage N4 DNA.
Virology 1980;104(1):205-18.
1980: S C Falco; W Zehring; Lucia B Rothman-Denes
DNA-dependent RNA polymerase from bacteriophage N4 virions. Purification and characterization.
The Journal of biological chemistry 1980;255(9):4339-47.