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Eytan Ruppin

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TOP 3
Livnat Jerby; Matej Oresic; Carsten Denkert; Tamar Geiger; Mika Hilvo; Gideon Y Stein; Lior Wolf; Eytan Ruppin
Metabolic associations of reduced proliferation and oxidative stress in advanced breast cancer.
Livnat Jerby; Eytan Ruppin
Predicting drug targets and biomarkers of cancer via genome-scale metabolic modeling.
Lior Lobel; Eytan Ruppin; Nadejda Sigal; Ilya Borovok; Anat A Herskovits
Integrative genomic analysis identifies isoleucine and CodY as regulators of Listeria monocytogenes virulence.

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All Publications

2012: Livnat Jerby; Matej Oresic; Carsten Denkert; Tamar Geiger; Mika Hilvo; Gideon Y Stein; Lior Wolf; Eytan Ruppin
Metabolic associations of reduced proliferation and oxidative stress in advanced breast cancer.
Cancer research 2012;72(22):5712-20.
2012: Livnat Jerby; Eytan Ruppin
Predicting drug targets and biomarkers of cancer via genome-scale metabolic modeling.
Clinical cancer research : an official journal of the American Association for Cancer Research 2012;18(20):5572-84.
2012: Lior Lobel; Eytan Ruppin; Nadejda Sigal; Ilya Borovok; Anat A Herskovits
Integrative genomic analysis identifies isoleucine and CodY as regulators of Listeria monocytogenes virulence.
PLoS genetics 2012;8(9):e1002887.
2012: Shiri Stempler; Yedael Y Waldman; Lior Wolf; Eytan Ruppin
Hippocampus neuronal metabolic gene expression outperforms whole tissue data in accurately predicting Alzheimer's disease progression.
Neurobiology of aging 2012;33(9):2230.e13-2230.e21.
2012: Taly Ben-Shitrit; Eytan Ruppin; Roded Sharan; Keren Shemesh; Nir Yosef; Martin Kupiec
Systematic identification of gene annotation errors in the widely used yeast mutation collections.
Nature methods 2012;9(4):373-8.
2012: Liram Vardi; Eytan Ruppin; Roded Sharan
A linearized constraint-based approach for modeling signaling networks.
Journal of computational biology : a journal of computational molecular cell biology 2012;19(2):232-40.
2012: Yael Silberberg; Assaf Gottlieb; Martin Kupiec; Eytan Ruppin; Roded Sharan
Large-scale elucidation of drug response pathways in humans.
Journal of computational biology : a journal of computational molecular cell biology 2012;19(2):163-74.
2012: Gidi Stein; Nir Yosef; Angelique Berens; Judith Horev; Adi Laser-Azogui; Hadar Reichman; James Resau; Eytan Ruppin; Roded Sharan; Ilan Tsarfaty
Met kinetic signature derived from the response to HGF/SF in a cellular model predicts breast cancer patient survival.
PloS one 2012;7(9):e45969.
2012: Shiri Stempler; Eytan Ruppin
Analyzing gene expression from whole tissue vs. different cell types reveals the central role of neurons in predicting severity of Alzheimer's disease.
PloS one 2012;7(9):e45879.
2012: Oded Magger; Eytan Ruppin; Yedael Y Waldman; Roded Sharan
Enhancing the prioritization of disease-causing genes through tissue specific protein interaction networks.
PLoS computational biology 2012;8(9):e1002690.
2012: Assaf Gottlieb; Yoram Oron; Eytan Ruppin; Gideon Y Stein; Roded Sharan
INDI: a computational framework for inferring drug interactions and their associated recommendations.
Molecular systems biology 2012;8():592.
2011: Assaf Gottlieb; Oded Magger; Eytan Ruppin; Igor Berman; Roded Sharan
PRINCIPLE: a tool for associating genes with diseases via network propagation.
Bioinformatics (Oxford, England) 2011;27(23):3325-6.
2011: Tamir Tuller; Shimshi Atar; Michael Gurevich; Eytan Ruppin; Anat Achiron
Global map of physical interactions among differentially expressed genes in multiple sclerosis relapses and remissions.
Human molecular genetics 2011;20(18):3606-19.
2011: Christian Frezza; Julie Adam; Barbara Chaneton; Ralph J DeBerardinis; Ori Folger; Ann Hedley; Livnat Jerby; Gabriela Kalna; Elaine D MacKenzie; Massimo Micaroni; Patrick J Pollard; Kartik N Rajagopalan; Eytan Ruppin; Tomer Shlomi; Ian P M Tomlinson; Dave G Watson; Liang Zheng; Eyal Gottlieb
Haem oxygenase is synthetically lethal with the tumour suppressor fumarate hydratase.
Nature 2011;477(7363):225-8.
2011: Shlomi Reuveni; Eytan Ruppin; Martin Kupiec; Isaac Meilijson; Tamir Tuller
Genome-scale analysis of translation elongation with a ribosome flow model.
PLoS computational biology 2011;7(9):e1002127.
2011: Tamir Tuller; Yael Sella; Shiri Freilich; Yana Girshovich; Uri Gophna; Avi Kreimer; Martin Kupiec; Eytan Ruppin
Association between translation efficiency and horizontal gene transfer within microbial communities.
Nucleic acids research 2011;39(11):4743-55.
2011: Lior Wolf; Chen Goldberg; Nathan Manor; Roded Sharan; Eytan Ruppin
Gene expression in the rodent brain is associated with its regional connectivity.
PLoS computational biology 2011;7(5):e1002040.
2011: Keren Yizhak; Tamir Tuller; Balázs Papp; Eytan Ruppin
Metabolic modeling of endosymbiont genome reduction on a temporal scale.
Molecular systems biology 2011;7():479.
2011: Tomer Shlomi; Tomer Benyamini; Eyal Gottlieb; Roded Sharan; Eytan Ruppin
Genome-scale metabolic modeling elucidates the role of proliferative adaptation in causing the Warburg effect.
PLoS computational biology 2011;7(3):e1002018.
2011: Liat Perlman; Assaf Gottlieb; Nir Atias; Eytan Ruppin; Roded Sharan
Combining drug and gene similarity measures for drug-target elucidation.
Journal of computational biology : a journal of computational molecular cell biology 2011;18(2):133-45.
2011: Tamir Tuller; Isana Veksler-Lublinsky; Nir Gazit; Martin Kupiec; Eytan Ruppin; Michal Ziv-Ukelson
Composite effects of gene determinants on the translation speed and density of ribosomes.
Genome biology 2011;12(11):R110.
2011: Nir Yosef; Einat Zalckvar; Hadas Zur; Liram Vardi; Nir Atias; Igor Berman; Max Homilius; Adi Kimchi; Assaf D Rubinstein; Eytan Ruppin; Roded Sharan
ANAT: a tool for constructing and analyzing functional protein networks.
Science signaling 2011;4(196):pl1.
2011: Yedael Y Waldman; Tamir Tuller; Alon Keinan; Eytan Ruppin
Selection for translation efficiency on synonymous polymorphisms in recent human evolution.
Genome biology and evolution 2011;3():749-61.
2011: Ori Folger; Christian Frezza; Eyal Gottlieb; Livnat Jerby; Eytan Ruppin; Tomer Shlomi
Predicting selective drug targets in cancer through metabolic networks.
Molecular systems biology 2011;7():501.
2011: Assaf Gottlieb; Eytan Ruppin; Gideon Y Stein; Roded Sharan
PREDICT: a method for inferring novel drug indications with application to personalized medicine.
Molecular systems biology 2011;7():496.
2010: Hadas Zur; Eytan Ruppin; Tomer Shlomi
iMAT: an integrative metabolic analysis tool.
Bioinformatics (Oxford, England) 2010;26(24):3140-2.
2010: Livnat Jerby; Tomer Shlomi; Eytan Ruppin
Computational reconstruction of tissue-specific metabolic models: application to human liver metabolism.
Molecular systems biology 2010;6():401.
2010: Tamir Tuller; Hadas Birin; Martin Kupiec; Eytan Ruppin
Reconstructing ancestral genomic sequences by co-evolution: formal definitions, computational issues, and biological examples.
Journal of computational biology : a journal of computational molecular cell biology 2010;17(9):1327-44.
2010: Revital Bronstein; Liron Levkovitz; Nir Yosef; Michaela Yanku; Eytan Ruppin; Roded Sharan; Heiner Westphal; Brian Oliver; Daniel Segal
Transcriptional regulation by CHIP/LDB complexes.
PLoS genetics 2010;6(8):e1001063.
2010: Eytan Ruppin; Jason A Papin; Luis F de Figueiredo; Stefan Schuster
Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks.
Current opinion in biotechnology 2010;21(4):502-10.
2010: Gilad Wainreb; Haim Ashkenazy; Yana Bromberg; Alina Starovolsky-Shitrit; Turkan Haliloglu; Eytan Ruppin; Karen B Avraham; Burkhard Rost; Nir Ben-Tal
MuD: an interactive web server for the prediction of non-neutral substitutions using protein structural data.
Nucleic acids research 2010;38(Web Server issue):W523-8.
2010: Stefan Schuster; Jan-Ulrich Kreft; Naama Brenner; Frank Wessely; Günter Theissen; Eytan Ruppin; Anja Schroeter
Cooperation and cheating in microbial exoenzyme production--theoretical analysis for biotechnological applications.
Biotechnology journal 2010;5(7):751-8.
2010: Shiri Freilich; Anat Kreimer; Isaac Meilijson; Uri Gophna; Roded Sharan; Eytan Ruppin
The large-scale organization of the bacterial network of ecological co-occurrence interactions.
Nucleic acids research 2010;38(12):3857-68.
2010: Keren Yizhak; Tomer Benyamini; Wolfram Liebermeister; Eytan Ruppin; Tomer Shlomi
Integrating quantitative proteomics and metabolomics with a genome-scale metabolic network model.
Bioinformatics (Oxford, England) 2010;26(12):i255-60.
2010: Yedael Y Waldman; Tamir Tuller; Tomer Shlomi; Roded Sharan; Eytan Ruppin
Translation efficiency in humans: tissue specificity, global optimization and differences between developmental stages.
Nucleic acids research 2010;38(9):2964-74.
2010: Tamir Tuller; Yedael Y Waldman; Martin Kupiec; Eytan Ruppin
Translation efficiency is determined by both codon bias and folding energy.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(8):3645-50.
2010: Liron Levkovitz; Nir Yosef; Marvin C Gershengorn; Eytan Ruppin; Roded Sharan; Yoram Oron
A novel HMM-based method for detecting enriched transcription factor binding sites reveals RUNX3 as a potential target in pancreatic cancer biology.
PloS one 2010;5(12):e14423.
2010: Tomer Benyamini; Ori Folger; Eytan Ruppin; Tomer Shlomi
Flux balance analysis accounting for metabolite dilution.
Genome biology 2010;11(4):R43.
2010: Oron Vanunu; Oded Magger; Eytan Ruppin; Tomer Shlomi; Roded Sharan
Associating genes and protein complexes with disease via network propagation.
PLoS computational biology 2010;6(1):e1000641.
2010: Tal Peleg; Nir Yosef; Eytan Ruppin; Roded Sharan
Network-free inference of knockout effects in yeast.
PLoS computational biology 2010;6(1):e1000635.
2010: Tamir Tuller; Hadas Birin; Uri Gophna; Martin Kupiec; Eytan Ruppin
Reconstructing ancestral gene content by coevolution.
Genome research 2010;20(1):122-32.
2009: Idit Diamant; Yonina C Eldar; Oleg Rokhlenko; Eytan Ruppin; Tomer Shlomi
A network-based method for predicting gene-nutrient interactions and its application to yeast amino-acid metabolism.
Molecular bioSystems 2009;5(12):1732-9.
2009: Yedael Y Waldman; Tamir Tuller; Roded Sharan; Eytan Ruppin
TP53 cancerous mutations exhibit selection for translation efficiency.
Cancer research 2009;69(22):8807-13.
2009: Alon Kaufman; Corinne Serfaty; Leon Y Deouell; Eytan Ruppin; Nachum Soroker
Multiperturbation analysis of distributed neural networks: the case of spatial neglect.
Human brain mapping 2009;30(11):3687-95.
2009: Nir Yosef; Martin Kupiec; Eytan Ruppin; Roded Sharan
A complex-centric view of protein network evolution.
Nucleic acids research 2009;37(12):e88.
2009: Lior Ungar; Nir Yosef; Yael Sela; Roded Sharan; Eytan Ruppin; Martin Kupiec
A genome-wide screen for essential yeast genes that affect telomere length maintenance.
Nucleic acids research 2009;37(12):3840-9.
2009: Shira Mintz-Oron; Asaph Aharoni; Eytan Ruppin; Tomer Shlomi
Network-based prediction of metabolic enzymes' subcellular localization.
Bioinformatics (Oxford, England) 2009;25(12):i247-52.
2009: Tamir Tuller; Udi Rubinstein; Dani Bar; Michael Gurevitch; Eytan Ruppin; Martin Kupiec
Higher-order genomic organization of cellular functions in yeast.
Journal of computational biology : a journal of computational molecular cell biology 2009;16(2):303-16.
2009: Tamir Tuller; Eytan Ruppin; Martin Kupiec
Properties of untranslated regions of the S. cerevisiae genome.
BMC genomics 2009;10():391.
2009: Shiri Freilich; Anat Kreimer; Elhanan Borenstein; Nir Yosef; Roded Sharan; Uri Gophna; Eytan Ruppin
Metabolic-network-driven analysis of bacterial ecological strategies.
Genome biology 2009;10(6):R61.
2009: Tamir Tuller; Martin Kupiec; Eytan Ruppin
Co-evolutionary networks of genes and cellular processes across fungal species.
Genome biology 2009;10(5):R48.
2009: Tomer Shlomi; Moran N Cabili; Eytan Ruppin
Predicting metabolic biomarkers of human inborn errors of metabolism.
Molecular systems biology 2009;5():263.
2009: Nir Yosef; Lior Ungar; Einat Zalckvar; Adi Kimchi; Martin Kupiec; Eytan Ruppin; Roded Sharan
Toward accurate reconstruction of functional protein networks.
Molecular systems biology 2009;5():248.
2008: Elhanan Borenstein; Martin Kupiec; marcel salathe; Eytan Ruppin
Large-scale reconstruction and phylogenetic analysis of metabolic environments.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(38):14482-7.
2008: Tomer Shlomi; Moran N Cabili; Markus J Herrgård; Bernhard Ø Palsson; Eytan Ruppin
Network-based prediction of human tissue-specific metabolism.
Nature biotechnology 2008;26(9):1003-10.
2008: Banu Dost; Tomer Shlomi; Nitin Gupta; Eytan Ruppin; Vineet Bafna; Roded Sharan
QNet: a tool for querying protein interaction networks.
Journal of computational biology : a journal of computational molecular cell biology 2008;15(7):913-25.
2008: Jörn Behre; Thomas Wilhelm; Axel von Kamp; Eytan Ruppin; Stefan Schuster
Structural robustness of metabolic networks with respect to multiple knockouts.
Journal of theoretical biology 2008;252(3):433-41.
2008: Anat Kreimer; Elhanan Borenstein; Uri Gophna; Eytan Ruppin
The evolution of modularity in bacterial metabolic networks.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(19):6976-81.
2008: Tamir Tuller; Martin Kupiec; Eytan Ruppin
Evolutionary rate and gene expression across different brain regions.
Genome biology 2008;9(9):R142.
2008: David Deutscher; Isaac Meilijson; Stefan Schuster; Eytan Ruppin
Can single knockouts accurately single out gene functions?
BMC systems biology 2008;2():50.
2008: Rafi Shachar; Lior Ungar; Martin Kupiec; Eytan Ruppin; Roded Sharan
A systems-level approach to mapping the telomere length maintenance gene circuitry.
Molecular systems biology 2008;4():172.
2008: Amit Kagian; Gideon Dror; Tommer Leyvand; Isaac Meilijson; Daniel Cohen-Or; Eytan Ruppin
A machine learning predictor of facial attractiveness revealing human-like psychophysical biases.
Vision research 2008;48(2):235-43.
2007: Tamir Tuller; Martin Kupiec; Eytan Ruppin
Determinants of protein abundance and translation efficiency in S. cerevisiae.
PLoS computational biology 2007;3(12):e248.
2007: Itay mayrose; Osnat Penn; Elana Erez; Nimrod D Rubinstein; Tomer Shlomi; Natalia Tarnovitski Freund; Erez M Bublil; Eytan Ruppin; Roded Sharan; Jonathan M Gershoni; Eric Martz; Tal Pupko
Pepitope: epitope mapping from affinity-selected peptides.
Bioinformatics (Oxford, England) 2007;23(23):3244-6.
2007: Tomer Shlomi; Markus Herrgard; Vasiliy Portnoy; Efrat Naim; Bernhard Ø Palsson; Roded Sharan; Eytan Ruppin
Systematic condition-dependent annotation of metabolic genes.
Genome research 2007;17(11):1626-33.
2007: Oleg Rokhlenko; Tomer Shlomi; Roded Sharan; Eytan Ruppin; Ron Y Pinter
Constraint-based functional similarity of metabolic genes: going beyond network topology.
Bioinformatics (Oxford, England) 2007;23(16):2139-46.
2007: Vered Kunik; Yasmine Meroz; Zach Solan; Ben Sandbank; Uri Weingart; Eytan Ruppin; David Horn
Functional representation of enzymes by specific peptides.
PLoS computational biology 2007;3(8):e167.
2007: Liat Segal; Michal Lapidot; Zach Solan; Eytan Ruppin; Yitzhak Pilpel; David Horn
Nucleotide variation of regulatory motifs may lead to distinct expression patterns.
Bioinformatics (Oxford, England) 2007;23(13):i440-9.
2007: Oved Ourfali; Tomer Shlomi; Trey Ideker; Eytan Ruppin; Roded Sharan
SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments.
Bioinformatics (Oxford, England) 2007;23(13):i359-66.
2007: Shay Cohen; Gideon Dror; Eytan Ruppin
Feature selection via coalitional game theory.
Neural computation 2007;19(7):1939-61.
2007: Irit Fishel; Alon Kaufman; Eytan Ruppin
Meta-analysis of gene expression data: a predictor-based approach.
Bioinformatics (Oxford, England) 2007;23(13):1599-606.
2007: Nadav Ahituv; Nihan Kavaslar; Wendy Schackwitz; Anna Ustaszewska; Joel Martin; Sybil Hebert; Heather Doelle; Baran Ersoy; Gregory V Kryukov; Steffen Schmidt; Nir Yosef; Eytan Ruppin; Roded Sharan; Christian Vaisse; Shamil Sunyaev; Robert Dent; Jonathan Cohen; Ruth McPherson; Len A Pennacchio
Medical sequencing at the extremes of human body mass.
American journal of human genetics 2007;80(4):779-91.
2007: Nir Yosef; Zohar Yakhini; Anya Tsalenko; Vessela N Kristensen; Anne-Lise Børresen-Dale; Eytan Ruppin; Roded Sharan
A supervised approach for identifying discriminating genotype patterns and its application to breast cancer data.
Bioinformatics (Oxford, England) 2007;23(2):e91-8.
2007: Tomer Shlomi; Yariv Eisenberg; Roded Sharan; Eytan Ruppin
A genome-scale computational study of the interplay between transcriptional regulation and metabolism.
Molecular systems biology 2007;3():101.
2007: Ofer Meshi; Tomer Shlomi; Eytan Ruppin
Evolutionary conservation and over-representation of functionally enriched network patterns in the yeast regulatory network.
BMC systems biology 2007;1():1.
2007: Martin Kupiec; Roded Sharan; Eytan Ruppin
Genetic interactions in yeast: is robustness going bust?
Molecular systems biology 2007;3():97.
2007: Elhanan Borenstein; Tomer Shlomi; Eytan Ruppin; Roded Sharan
Gene loss rate: a probabilistic measure for the conservation of eukaryotic genes.
Nucleic acids research 2007;35(1):e7.
2007: Itay mayrose; Tomer Shlomi; Nimrod D Rubinstein; Jonathan M Gershoni; Eytan Ruppin; Roded Sharan; Tal Pupko
Epitope mapping using combinatorial phage-display libraries: a graph-based algorithm.
Nucleic acids research 2007;35(1):69-78.
2006: Alon Kaufman; Gideon Dror; Isaac Meilijson; Eytan Ruppin
Gene expression of Caenorhabditis elegans neurons carries information on their synaptic connectivity.
PLoS computational biology 2006;2(12):e167.
2006: David Deutscher; Isaac Meilijson; Martin Kupiec; Eytan Ruppin
Multiple knockout analysis of genetic robustness in the yeast metabolic network.
Nature genetics 2006;38(9):993-8.
2006: Elhanan Borenstein; Isaac Meilijson; Eytan Ruppin
The effect of phenotypic plasticity on evolution in multipeaked fitness landscapes.
Journal of evolutionary biology 2006;19(5):1555-70.
2006: Yonatan Bilu; Tomer Shlomi; Naama Barkai; Eytan Ruppin
Conservation of expression and sequence of metabolic genes is reflected by activity across metabolic states.
PLoS computational biology 2006;2(8):e106.
2006: Nir Yosef; Alon Kaufman; Eytan Ruppin
Inferring functional pathways from multi-perturbation data.
Bioinformatics (Oxford, England) 2006;22(14):e539-46.
2006: Elhanan Borenstein; Eytan Ruppin
Direct evolution of genetic robustness in microRNA.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(17):6593-8.
2006: Larisa Vatov; Ziv Kizner; Eytan Ruppin; Sigal Meilin; Tamar Manor; Avraham Mayevsky
Modeling brain energy metabolism and function: a multiparametric monitoring approach.
Bulletin of mathematical biology 2006;68(2):275-91.
2006: Silpa Suthram; Tomer Shlomi; Eytan Ruppin; Roded Sharan; Trey Ideker
A direct comparison of protein interaction confidence assignment schemes.
BMC bioinformatics 2006;7():360.
2006: Zohar Ganon; Alon Keinan; Eytan Ruppin
Neurocontroller analysis via evolutionary network minimization.
Artificial life 2006;12(3):435-48.
2006: Alon Keinan; Ben Sandbank; Claus C Hilgetag; Isaac Meilijson; Eytan Ruppin
Axiomatic scalable neurocontroller analysis via the Shapley value.
Artificial life 2006;12(3):333-52.
2006: Tomer Shlomi; Daniel Segal; Eytan Ruppin; Roded Sharan
QPath: a method for querying pathways in a protein-protein interaction network.
BMC bioinformatics 2006;7():199.
2006: Keren Saggie-Wexler; Alon Keinan; Eytan Ruppin
Neural processing of counting in evolved spiking and McCulloch-Pitts agents.
Artificial life 2006;12(1):1-16.
2006: Yael Eisenthal; Gideon Dror; Eytan Ruppin
Facial attractiveness: beauty and the machine.
Neural computation 2006;18(1):119-42.
2005: Alon Kaufman; Alon Keinan; Isaac Meilijson; Martin Kupiec; Eytan Ruppin
Quantitative analysis of genetic and neuronal multi-perturbation experiments.
PLoS computational biology 2005;1(6):e64.
2005: Zach Solan; David Horn; Eytan Ruppin; Shimon Edelman
Unsupervised learning of natural languages.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(33):11629-34.
2005: Tomer Shlomi; Omer Berkman; Eytan Ruppin
Regulatory on/off minimization of metabolic flux changes after genetic perturbations.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(21):7695-700.
2005: Vered Kunik; Zach Solan; Shimon Edelman; Eytan Ruppin; David Horn
Motif extraction and protein classification.
Proceedings / IEEE Computational Systems Bioinformatics Conference, CSB. IEEE Computational Systems Bioinformatics Conference 2005;():80-5.
2004: Alon Keinan; Ben Sandbank; Claus C Hilgetag; Isaac Meilijson; Eytan Ruppin
Fair attribution of functional contribution in artificial and biological networks.
Neural computation 2004;16(9):1887-915.
2004: Alon Kaufman; Martin Kupiec; Eytan Ruppin
Multi-knockout genetic network analysis: the Rad6 example.
Proceedings / IEEE Computational Systems Bioinformatics Conference, CSB. IEEE Computational Systems Bioinformatics Conference 2004;():332-40.
2004: Alon Keinan; Alon Kaufman; Nadia Sachs; Claus C Hilgetag; Eytan Ruppin
Fair localization of function via multi-lesion analysis.
Neuroinformatics 2004;2(2):163-8.
2003: Alon Keinan; Isaac Meilijson; Eytan Ruppin
Controlled analysis of neurocontrollers with informational lesioning.
Philosophical transactions. Series A, Mathematical, physical, and engineering sciences 2003;361(1811):2123-44.
2003: Ranit Aharonov; Lior Segev; Isaac Meilijson; Eytan Ruppin
Localization of function via lesion analysis.
Neural computation 2003;15(4):885-913.
2003: Shlomy Boshy; Eytan Ruppin
Evolving small neurocontrollers with self-organized compact encoding.
Artificial life 2003;9(2):131-51.
2003: Lior Segev; Ranit Aharonov; Isaac Meilijson; Eytan Ruppin
High-dimensional analysis of evolutionary autonomous agents.
Artificial life 2003;9(1):1-20.
2002: Daphna Joel; Yael Niv; Eytan Ruppin
Actor-critic models of the basal ganglia: new anatomical and computational perspectives.
Neural networks : the official journal of the International Neural Network Society 2002;15(4-6):535-47.
2002: Eytan Ruppin
Evolutionary autonomous agents: a neuroscience perspective.
Nature reviews. Neuroscience 2002;3(2):132-41.
2001: N Levy; D Horn; Isaac Meilijson; Eytan Ruppin
Distributed synchrony in a cell assembly of spiking neurons.
Neural networks : the official journal of the International Neural Network Society 2001;14(6-7):815-24.
2001: Eytan Ruppin; James A Reggia
Cortical spreading depression and the pathogenesis of brain disorders: a computational and neural network-based investigation.
Neurological research 2001;23(5):447-56.
2001: G Chechik; Isaac Meilijson; Eytan Ruppin
Effective neuronal learning with ineffective Hebbian learning rules.
Neural computation 2001;13(4):817-40.
2001: R Aharonov-Barki; T Beker; Eytan Ruppin
Emergence of memory-driven command neurons in evolved artificial agents.
Neural computation 2001;13(3):691-716.
2001: Zach Solan; Eytan Ruppin
Similarity in perception: a window to brain organization.
Journal of cognitive neuroscience 2001;13(1):18-30.
1999: G Chechik; Isaac Meilijson; Eytan Ruppin
Neuronal regulation: A mechanism for synaptic pruning during brain maturation.
Neural computation 1999;11(8):2061-80.
1999: E Cohen; Eytan Ruppin
From parallel to serial processing: a computational study of visual search.
Perception & psychophysics 1999;61(7):1449-61.
1999: N Levy; David Horn; Eytan Ruppin
Associative memory in a multi-modular network.
Neural computation 1999;11(7):1717-37.
1999: Eytan Ruppin; K Revett; E Ofer; SM Goodall; James A Reggia
Penumbral tissue damage following acute stroke: a computational investigation.
Progress in brain research 1999;121():243-60.
1999: D Horn; N Levy; Eytan Ruppin
Multimodular networks and semantic memory impairments.
Progress in brain research 1999;121():67-72.
1999: Eytan Ruppin; James A Reggia; D Glanzman
Understanding brain and cognitive disorders: the computational perspective.
Progress in brain research 1999;121():ix-xv.
1999: Eytan Ruppin; E Ofer; James A Reggia; K Revett; SM Goodall
Pathogenic mechanisms in ischemic damage: a computational study.
Computers in biology and medicine 1999;29(1):39-59.
1998: David Horn; N Levy; Eytan Ruppin
Neuronal regulation versus synaptic unlearning in memory maintenance mechanisms.
Network (Bristol, England) 1998;9(4):577-86.
1998: G Chechik; Isaac Meilijson; Eytan Ruppin
Synaptic pruning in development: a computational account.
Neural computation 1998;10(7):1759-77.
1998: K Revett; Eytan Ruppin; SM Goodall; James A Reggia
Spreading depression in focal ischemia: a computational study.
Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism 1998;18(9):998-1007.
1998: Eytan Ruppin; James A Reggia
Seeking order in disorder: computational studies of neurologic and psychiatric diseases.
Artificial intelligence in medicine 1998;13(1-2):1-12.
1998: A Greenstein-Messica; Eytan Ruppin
Synaptic runaway in associative networks and the pathogenesis of schizophrenia.
Neural computation 1998;10(2):451-65.
1998: David Horn; N Levy; Eytan Ruppin
Memory maintenance via neuronal regulation.
Neural computation 1998;10(1):1-18.
1997: SM Goodall; James A Reggia; Y Chen; Eytan Ruppin; Carol Whitney
A computational model of acute focal cortical lesions.
Stroke; a journal of cerebral circulation 1997;28(1):101-9.
1996: R Levi; Eytan Ruppin; Y Matias; James A Reggia
Frequency-spatial transformation: a proposal for parsimonious intra-cortical communication.
International journal of neural systems 1996;7(5):591-8.
1996: David Horn; N Levy; Eytan Ruppin
Neuronal-based synaptic compensation: a computational study in Alzheimer's disease.
Neural computation 1996;8(6):1227-43.
1996: Eytan Ruppin; James A Reggia; David Horn
Pathogenesis of schizophrenic delusions and hallucinations: a neural model.
Schizophrenia bulletin 1996;22(1):105-23.
1995: Eytan Ruppin; James A Reggia
Patterns of functional damage in neural network models of associative memory.
Neural computation 1995;7(5):1105-27.
1995: David Horn; Eytan Ruppin
Compensatory mechanisms in an attractor neural network model of schizophrenia.
Neural computation 1995;7(1):182-205.
1995: Eytan Ruppin; James A Reggia
A neural model of memory impairment in diffuse cerebral atrophy.
The British journal of psychiatry : the journal of mental science 1995;166(1):19-28.
1993: Eytan Ruppin; E L Schwartz; Yehezkel Yeshurun
Examining the volume efficiency of the cortical architecture in a multi-processor network model.
Biological cybernetics 1993;70(1):89-94.
1992: David Horn; Eytan Ruppin
Extra-pyramidal symptoms in Alzheimer's disease: a hypothesis.
Medical hypotheses 1992;39(4):316-8.
1989: Eyal Schiff; Edna Peleg; Mordechai Goldenberg; Talma Rosenthal; Eytan Ruppin; M Tamarkin; Gad Barkai; Gilad Ben-Baruch; I Yahal; J Blankstein
The use of aspirin to prevent pregnancy-induced hypertension and lower the ratio of thromboxane A2 to prostacyclin in relatively high risk pregnancies.
The New England journal of medicine 1989;321(6):351-6.