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Paul Birch

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Living Beings

Chemicals & Drugs

Disorders

Plant Diseases

Concepts & Ideas

Genes & Molecular Sequences

Amino Acid Sequence

Physiology

Procedures

Reverse Transcriptase Polymerase Chain Reaction

Devices

Chromosomes, Artificial, Bacterial

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Publications

TOP 3
McLellan Hazel; Gilroy Eleanor M; Yun Byung-Wook; Birch Paul R J; Loake Gary J
Functional redundancy in the Arabidopsis Cathepsin B gene family contributes to basal defence, the hypersensitive response and senescence.
Birch Paul R J; Armstrong Miles; Bos Jorunn; Boevink Petra; Gilroy Eleanor M; Taylor Rosalind M; Wawra Stephan; Pritchard Leighton; Conti Lucio; Ewan Richard; Whisson Stephen C; van West Pieter; Sadanandom Ari; Kamoun Sophien
Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans.
Grouffaud Severine; van West Pieter; Avrova Anna O; Birch Paul R J; Whisson Stephen C
Plasmodium falciparum and Hyaloperonospora parasitica effector translocation motifs are functional in Phytophthora infestans.

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All Publications

2009: McLellan Hazel; Gilroy Eleanor M; Yun Byung-Wook; Birch Paul R J; Loake Gary J
Functional redundancy in the Arabidopsis Cathepsin B gene family contributes to basal defence, the hypersensitive response and senescence.
The New phytologist 2009;183(2):408-18.
2009: Birch Paul R J; Armstrong Miles; Bos Jorunn; Boevink Petra; Gilroy Eleanor M; Taylor Rosalind M; Wawra Stephan; Pritchard Leighton; Conti Lucio; Ewan Richard; Whisson Stephen C; van West Pieter; Sadanandom Ari; Kamoun Sophien
Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans.
Journal of experimental botany 2009;60(4):1133-40.
2008: Grouffaud Severine; van West Pieter; Avrova Anna O; Birch Paul R J; Whisson Stephen C
Plasmodium falciparum and Hyaloperonospora parasitica effector translocation motifs are functional in Phytophthora infestans.
Microbiology (Reading, England) 2008;154(Pt 12):3743-51.
2008: van Poppel Pieter M J A; Guo Jun; van de Vondervoort Peter J I; Jung Maartje W M; Birch Paul R J; Whisson Stephen C; Govers Francine
The Phytophthora infestans avirulence gene Avr4 encodes an RXLR-dEER effector.
Molecular plant-microbe interactions : MPMI 2008;21(11):1460-70.
2008: Avrova Anna O; Boevink Petra C; Young Vanessa; Grenville-Briggs Laura J; van West Pieter; Birch Paul R J; Whisson Stephen C
A novel Phytophthora infestans haustorium-specific membrane protein is required for infection of potato.
Cellular microbiology 2008;10(11):2271-84.
2008: Birch Paul R J; Boevink Petra C; Gilroy Eleanor M; Hein Ingo; Pritchard Leighton; Whisson Stephen C
Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance.
Current opinion in plant biology 2008;11(4):373-9.
2008: Walker Claire A; Köppe Maico; Grenville-Briggs Laura J; Avrova Anna O; Horner Neil R; McKinnon Alastair D; Whisson Stephen C; Birch Paul R J; van West Pieter
A putative DEAD-box RNA-helicase is required for normal zoospore development in the late blight pathogen Phytophthora infestans.
Fungal genetics and biology : FG & B 2008;45(6):954-62.
2008: Judelson Howard S; Ah-Fong Audrey M V; Aux George; Avrova Anna O; Bruce Catherine; Cakir Cahid; da Cunha Luis; Grenville-Briggs Laura; Latijnhouwers Maita; Ligterink Wilco; Meijer Harold J G; Roberts Samuel; Thurber Carrie S; Whisson Stephen C; Birch Paul R J; Govers Francine; Kamoun Sophien; van West Pieter; Windass John
Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome.
Molecular plant-microbe interactions : MPMI 2008;21(4):433-47.
2008: Grenville-Briggs Laura J; Anderson Victoria L; Fugelstad Johanna; Avrova Anna O; Bouzenzana Jamel; Williams Alison; Wawra Stephan; Whisson Stephen C; Birch Paul R J; Bulone Vincent; van West Pieter
Cellulose synthesis in Phytophthora infestans is required for normal appressorium formation and successful infection of potato.
The Plant cell 2008;20(3):720-38.
2007: Whisson Stephen C; Boevink Petra C; Moleleki Lucy; Avrova Anna O; Morales Juan G; Gilroy Eleanor M; Armstrong Miles R; Grouffaud Severine; van West Pieter; Chapman Sean; Hein Ingo; Toth Ian K; Pritchard Leighton; Birch Paul R J
A translocation signal for delivery of oomycete effector proteins into host plant cells.
Nature 2007;450(7166):115-8.
2007: Gilroy Eleanor M; Hein Ingo; van der Hoorn Renier; Boevink Petra C; Venter Eduard; McLellan Hazel; Kaffarnik Florian; Hrubikova Katarina; Shaw Jane; Holeva Maria; López Eduardo C; Borras-Hidalgo Orlando; Pritchard Leighton; Loake Gary J; Lacomme Christophe; Birch Paul R J
Involvement of cathepsin B in the plant disease resistance hypersensitive response.
The Plant journal : for cell and molecular biology 2007;52(1):1-13.
2007: Ravirala Ramani S; Barabote Ravi D; Wheeler David M; Reverchon Sylvie; Tatum Ouwatha; Malouf Jeremy; Liu Hui; Pritchard Leighton; Hedley Peter E; Birch Paul R J; Toth Ian K; Payton Paxton; San Francisco Michael J D
Efflux pump gene expression in Erwinia chrysanthemi is induced by exposure to phenolic acids.
Molecular plant-microbe interactions : MPMI 2007;20(3):313-20.
2007: Avrova Anna O; Whisson Stephen C; Pritchard Leighton; Venter Eduard; De Luca Sergio; Hein Ingo; Birch Paul R J
A novel non-protein-coding infection-specific gene family is clustered throughout the genome of Phytophthora infestans.
Microbiology (Reading, England) 2007;153(Pt 3):747-59.
2006: Bos Jorunn I B; Kanneganti Thirumala-Devi; Young Carolyn; Cakir Cahid; Huitema Edgar; Win Joe; Armstrong Miles R; Birch Paul R J; Kamoun Sophien
The C-terminal half of Phytophthora infestans RXLR effector AVR3a is sufficient to trigger R3a-mediated hypersensitivity and suppress INF1-induced cell death in Nicotiana benthamiana.
The Plant journal : for cell and molecular biology 2006;48(2):165-76.
2006: Pritchard Leighton; White Jennifer A; Birch Paul R J; Toth Ian K
GenomeDiagram: a python package for the visualization of large-scale genomic data.
Bioinformatics (Oxford, England) 2006;22(5):616-7.
2006: Birch Paul R J; Rehmany Anne P; Pritchard Leighton; Kamoun Sophien; Beynon Jim L
Trafficking arms: oomycete effectors enter host plant cells.
Trends in microbiology 2006;14(1):8-11.
2006: Toth Ian K; Pritchard Leighton; Birch Paul R J
Comparative genomics reveals what makes an enterobacterial plant pathogen.
Annual review of phytopathology 2006;44():305-36.
2005: Toth Ian K; Birch Paul R J
Rotting softly and stealthily.
Current opinion in plant biology 2005;8(4):424-9.
2005: Rehmany Anne P; Gordon Anna; Rose Laura E; Allen Rebecca L; Armstrong Miles R; Whisson Stephen C; Kamoun Sophien; Tyler Brett M; Birch Paul R J; Beynon Jim L
Differential recognition of highly divergent downy mildew avirulence gene alleles by RPP1 resistance genes from two Arabidopsis lines.
The Plant cell 2005;17(6):1839-50.
2005: Armstrong Miles R; Whisson Stephen C; Pritchard Leighton; Bos Jorunn I B; Venter Eduard; Avrova Anna O; Rehmany Anne P; Böhme Ulrike; Brooks Karen; Cherevach Inna; Hamlin Nancy; White Brian; Fraser Audrey; Lord Angela; Quail Michael A; Churcher Carol; Hall Neil; Berriman Matthew; Huang Sanwen; Kamoun Sophien; Beynon Jim L; Birch Paul R J
An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(21):7766-71.
2005: Pemberton C L; Whitehead N A; Sebaihia M; Bell K S; Hyman L J; Harris S J; Matlin A J; Robson N D; Birch P R J; Carr J P; Toth I K; Salmond G P C
Novel quorum-sensing-controlled genes in Erwinia carotovora subsp. carotovora: identification of a fungal elicitor homologue in a soft-rotting bacterium.
Molecular plant-microbe interactions : MPMI 2005;18(4):343-53.
2005: Grenville-Briggs Laura J; Avrova Anna O; Bruce Catherine R; Williams Alison; Whisson Stephen C; Birch Paul R J; van West Pieter
Elevated amino acid biosynthesis in Phytophthora infestans during appressorium formation and potato infection.
Fungal genetics and biology : FG & B 2005;42(3):244-56.
2005: Liu Zhenyu; Bos Jorunn I B; Armstrong Miles; Whisson Stephen C; da Cunha Luis; Torto-Alalibo Trudy; Win Joe; Avrova Anna O; Wright Frank; Birch Paul R J; Kamoun Sophien
Patterns of diversifying selection in the phytotoxin-like scr74 gene family of Phytophthora infestans.
Molecular biology and evolution 2005;22(3):659-72.
2004: van den Berg Noëlani; Crampton Bridget G; Hein Ingo; Birch Paul R J; Berger Dave K
High-throughput screening of suppression subtractive hybridization cDNA libraries using DNA microarray analysis.
BioTechniques 2004;37(5):818-24.
2004: Tani Helen; Chen Xinwei; Nurmberg Pedro; Grant John J; SantaMaria Marjorie; Chini Andrea; Gilroy Eleanor; Birch Paul R J; Loake Gary J
Activation tagging in plants: a tool for gene discovery.
Functional & integrative genomics 2004;4(4):258-66.
2004: Holeva Maria C; Bell Kenneth S; Hyman Lizbeth J; Avrova Anna O; Whisson Stephen C; Birch Paul R J; Toth Ian K
Use of a pooled transposon mutation grid to demonstrate roles in disease development for Erwinia carotovora subsp. atroseptica putative type III secreted effector (DspE/A) and helper (HrpN) proteins.
Molecular plant-microbe interactions : MPMI 2004;17(9):943-50.
2004: Faivre-Rampant Odile; Gilroy Eleanor M; Hrubikova Katarina; Hein Ingo; Millam Steve; Loake Gary J; Birch Paul; Taylor Mark; Lacomme Christophe
Potato virus X-induced gene silencing in leaves and tubers of potato.
Plant physiology 2004;134(4):1308-16.
2004: Hein Ingo; Campbell Edward I; Woodhead Mary; Hedley Peter E; Young Vanessa; Morris Wayne L; Ramsay Luke; Stockhaus Joerg; Lyon Gary D; Newton Adrian C; Birch Paul R J
Characterisation of early transcriptional changes involving multiple signalling pathways in the Mla13 barley interaction with powdery mildew ( Blumeria graminis f. sp. hordei).
Planta 2004;218(5):803-13.
2003: Avrova Anna O; Venter Eduard; Birch Paul R J; Whisson Stephen C
Profiling and quantifying differential gene transcription in Phytophthora infestans prior to and during the early stages of potato infection.
Fungal genetics and biology : FG & B 2003;40(1):4-14.
2003: Rehmany Anne P; Grenville Laura J; Gunn Nick D; Allen Rebecca L; Paniwnyk Zennia; Byrne Jane; Whisson Stephen C; Birch Paul R J; Beynon Jim L
A genetic interval and physical contig spanning the Peronospora parasitica (At) avirulence gene locus ATR1Nd.
Fungal genetics and biology : FG & B 2003;38(1):33-42.
2002: Bell Kenneth S; Avrova Anna O; Holeva Maria C; Cardle Linda; Morris Wayne; De Jong Walter; Toth Ian K; Waugh Robbie; Bryan Glenn J; Birch Paul R J
Sample sequencing of a selected region of the genome of Erwinia carotovora subsp. atroseptica reveals candidate phytopathogenicity genes and allows comparison with Escherichia coli.
Microbiology (Reading, England) 2002;148(Pt 5):1367-78.
2001: Whisson S C; van der Lee T; Bryan G J; Waugh R; Govers F; Birch P R
Physical mapping across an avirulence locus of Phytophthora infestans using a highly representative, large-insert bacterial artificial chromosome library.
Molecular genetics and genomics : MGG 2001;266(2):289-95.
2000: Dellagi A; Helibronn J; Avrova A O; Montesano M; Palva E T; Stewart H E; Toth I K; Cooke D E; Lyon G D; Birch P R
A potato gene encoding a WRKY-like transcription factor is induced in interactions with Erwinia carotovora subsp. atroseptica and Phytophthora infestans and is coregulated with class I endochitinase expression.
Molecular plant-microbe interactions : MPMI 2000;13(10):1092-101.
2000: Hyman L J; Birch P R; Dellagi A; Avrova A O; Toth I K
A competitive PCR-based method for the detection and quantification of Erwinia carotovora subsp. atroseptica On potato tubers.
Letters in applied microbiology 2000;30(4):330-5.
2000: Dellagi A; Birch P R; Heilbronn J; Lyon G D; Toth I K
cDNA-AFLP analysis of differential gene expression in the prokaryotic plant pathogen Erwinia carotovora.
Microbiology (Reading, England) 2000;146 ( Pt 1)():165-71.
1999: Avrova A O; Stewart H E; De Jong W D; Heilbronn J; Lyon G D; Birch P R
A cysteine protease gene is expressed early in resistant potato interactions with Phytophthora infestans.
Molecular plant-microbe interactions : MPMI 1999;12(12):1114-9.

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Paul Birch

Research Profile (preview)

Living Beings

Chemicals & Drugs

Disorders

Concepts & Ideas

Genes & Molecular Sequences

Physiology

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Network (preview)

Publications

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All Publications