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James Birchler

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Zea mays

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Lisa B Kanizay; Patrice S Albert; James A Birchler; R Kelly Dawe
Intragenomic conflict between the two major knob repeats of maize.
Lin Sun; Jianlin Cheng; Ryan C Donohue; Adam F Johnson; Jilong Li; James A Birchler
Dosage compensation and inverse effects in triple X metafemales of Drosophila.
James A Birchler
Aneuploidy in plants and flies: The origin of studies of genomic imbalance.

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All Publications

2013: Lisa B Kanizay; Patrice S Albert; James A Birchler; R Kelly Dawe
Intragenomic conflict between the two major knob repeats of maize.
Genetics 2013;194(1):81-9.
2013: Lin Sun; Jianlin Cheng; Ryan C Donohue; Adam F Johnson; Jilong Li; James A Birchler
Dosage compensation and inverse effects in triple X metafemales of Drosophila.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(18):7383-8.
2013: James A Birchler
Aneuploidy in plants and flies: The origin of studies of genomic imbalance.
Seminars in cell & developmental biology 2013;24(4):315-9.
2013: Lin Sun; Jianlin Cheng; Ryan C Donohue; Harvey R Fernandez; Jilong Li; James A Birchler
Male-specific lethal complex in Drosophila counteracts histone acetylation and does not mediate dosage compensation.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(9):E808-17.
2013: Hong Yao; Anjali Dogra Gray; Donald L Auger; James A Birchler
Genomic dosage effects on heterosis in triploid maize.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(7):2665-9.
2013: Zhi Gao; Fangpu Han; Jonathan C Lamb; Patrice S Albert; Tatiana V Danilova; James A Birchler
Labeling meiotic chromosomes in maize with fluorescence in situ hybridization.
Methods in molecular biology (Clifton, N.J.) 2013;990():35-43.
2013: Rick E Masonbrink; Shulan Fu; Fangpu Han; James A Birchler
Heritable loss of replication control of a minichromosome derived from the B chromosome of maize.
Genetics 2013;193(1):77-84.
2012: James A Birchler
Insights from paleogenomic and population studies into the consequences of dosage sensitive gene expression in plants.
Current opinion in plant biology 2012;15(5):544-8.
2012: James A Birchler
Messing with Mendel.
Developmental cell 2012;23(4):678-9.
2012: James A Birchler; Reiner A Veitia
Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(37):14746-53.
2012: Robert T Gaeta; Lakshminarasimhan Krishnaswamy; Rick E Masonbrink; Changzeng Zhao; James A Birchler
Synthetic chromosome platforms in plants.
Annual review of plant biology 2012;63():307-30.
2012: Weiwu Xie; James A Birchler
Identification of Inverse Regulator-a (Inr-a) as Synonymous with Pre-mRNA Cleavage Complex II Protein (Pcf11) in Drosophila.
G3 (Bethesda, Md.) 2012;2(6):701-6.
2012: Rick E Masonbrink; Robert T Gaeta; James A Birchler
Multiple maize minichromosomes in meiosis.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2012;20(4):395-402.
2012: James A Birchler; Gernot G Presting
Retrotransposon insertion targeting: a mechanism for homogenization of centromere sequences on nonhomologous chromosomes.
Genes & development 2012;26(7):638-40.
2012: R E Masonbrink; James A Birchler
Accumulation of multiple copies of maize minichromosomes.
Cytogenetic and genome research 2012;137(1):50-9.
2011: Zhi Gao; Fangpu Han; Qianhua Dong; Shulan Fu; James A Birchler
Inactivation of a centromere during the formation of a translocation in maize.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2011;19(6):755-61.
2011: Weiwu Xie; Chengzhi Liang; James A Birchler
Inhibition of RNA interference and modulation of transposable element expression by cell death in Drosophila.
Genetics 2011;188(4):823-34.
2011: Dal-Hoe Koo; Fangpu Han; James A Birchler; Jiming Jiang
Distinct DNA methylation patterns associated with active and inactive centromeres of the maize B chromosome.
Genome research 2011;21(6):908-14.
2011: James A Birchler; Zhi Gao; Anupma Sharma; Gernot G Presting; Fangpu Han
Epigenetic aspects of centromere function in plants.
Current opinion in plant biology 2011;14(2):217-22.
2011: Robert T Gaeta; Tatiana V Danilova; Changzeng Zhao; Rick E Masonbrink; Morgan E McCaw; James A Birchler
Recovery of a telomere-truncated chromosome via a compensating translocation in maize.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 2011;54(3):184-95.
2011: Hong Yao; Akio Kato; Brian Mooney; James A Birchler
Phenotypic and gene expression analyses of a ploidy series of maize inbred Oh43.
Plant molecular biology 2011;75(3):237-51.
2011: James A Birchler; Reiner A Veitia
Protein-Protein and Protein-DNA Dosage Balance and Differential Paralog Transcription Factor Retention in Polyploids.
Frontiers in plant science 2011;2():64.
2011: Akio Kato; Jonathan C Lamb; Patrice S Albert; Tatiana Danilova; Fangpu Han; Zhi Gao; Seth Findley; James A Birchler
Chromosome painting for plant biotechnology.
Methods in molecular biology (Clifton, N.J.) 2011;701():67-96.
2010: L M Roark; Alice Hui; L Donnelly; James A Birchler; Kathleen J Newton
Recent and frequent insertions of chloroplast DNA into maize nuclear chromosomes.
Cytogenetic and genome research 2010;129(1-3):17-23.
2010: James A Birchler; Hong Yao; Sivanandan Chudalayandi; Daniel Vaiman; Reiner A Veitia
Heterosis.
The Plant cell 2010;22(7):2105-12.
2010: P S Albert; Z Gao; T V Danilova; James A Birchler
Diversity of chromosomal karyotypes in maize and its relatives.
Cytogenetic and genome research 2010;129(1-3):6-16.
2010: James A Birchler
Reflections on studies of gene expression in aneuploids.
The Biochemical journal 2010;426(2):119-23.
2010: Rick E Masonbrink; James A Birchler
Sporophytic nondisjunction of the maize B chromosome at high copy numbers.
Journal of genetics and genomics = Yi chuan xue bao 2010;37(1):79-84.
2010: Nicole C Riddle; Hongmei Jiang; Lingling An; R W Doerge; James A Birchler
Gene expression analysis at the intersection of ploidy and hybridity in maize.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2010;120(2):341-53.
2009: James A Birchler; Zhi Gao; Fangpu Han
Pairing in plants: Import is important.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(47):19751-2.
2009: Fangpu Han; Zhi Gao; James A Birchler
Reactivation of an inactive centromere reveals epigenetic and structural components for centromere specification in maize.
The Plant cell 2009;21(7):1929-39.
2009: James A Birchler; Zhi Gao; Fangpu Han
A tale of two centromeres--diversity of structure but conservation of function in plants and animals.
Functional & integrative genomics 2009;9(1):7-13.
2009: James A Birchler
Ubiquitous RNA-dependent RNA polymerase and gene silencing.
Genome biology 2009;10(11):243.
2009: Harsh H Kavi; James A Birchler
Interaction of RNA polymerase II and the small RNA machinery affects heterochromatic silencing in Drosophila.
Epigenetics & chromatin 2009;2(1):15.
2009: Harsh H Kavi; James A Birchler
Drosophila KDM2 is a H3K4me3 demethylase regulating nucleolar organization.
BMC research notes 2009;2():217.
2009: James A Birchler; Fangpu Han
Maize centromeres: structure, function, epigenetics.
Annual review of genetics 2009;43():287-303.
2009: X Sun; James A Birchler
Interaction study of the male specific lethal (MSL) complex and trans-acting dosage effects in metafemales of Drosophila melanogaster.
Cytogenetic and genome research 2009;124(3-4):298-311.
2009: X Sun; James A Birchler
Studies on the short range spreading of the male specific lethal (MSL) complex on the X chromosome in Drosophila.
Cytogenetic and genome research 2009;124(2):158-69.
2008: Reiner A Veitia; Samuel Bottani; James A Birchler
Cellular reactions to gene dosage imbalance: genomic, transcriptomic and proteomic effects.
Trends in genetics : TIG 2008;24(8):390-7.
2008: Tatiana V Danilova; James A Birchler
Integrated cytogenetic map of mitotic metaphase chromosome 9 of maize: resolution, sensitivity, and banding paint development.
Chromosoma 2008;117(4):345-56.
2008: James A Birchler; Harsh H Kavi
Molecular biology. Slicing and dicing for small RNAs.
Science (New York, N.Y.) 2008;320(5879):1023-4.
2008: Juan M Vega; Weichang Yu; Fangpu Han; Akio Kato; Eric M Peters; Zhanyuan J Zhang; James A Birchler
Agrobacterium-mediated transformation of maize (Zea mays) with Cre-lox site specific recombination cassettes in BIBAC vectors.
Plant molecular biology 2008;66(6):587-98.
2008: Nicole C Riddle; James A Birchler
Comparative analysis of inbred and hybrid maize at the diploid and tetraploid levels.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2008;116(4):563-76.
2008: James A Birchler; W Yu; Fangpu Han
Plant engineered minichromosomes and artificial chromosome platforms.
Cytogenetic and genome research 2008;120(3-4):228-32.
2008: Harsh H Kavi; Harvey Fernandez; Weiwu Xie; James A Birchler
Genetics and biochemistry of RNAi in Drosophila.
Current topics in microbiology and immunology 2008;320():37-75.
2008: Ashley N Lough; Leah M Roark; Akio Kato; Thomas Ream; Jonathan C Lamb; James A Birchler; Kathleen J Newton
Mitochondrial DNA transfer to the nucleus generates extensive insertion site variation in maize.
Genetics 2008;178(1):47-55.
2007: Fangpu Han; Zhi Gao; Weichang Yu; James A Birchler
Minichromosome analysis of chromosome pairing, disjunction, and sister chromatid cohesion in maize.
The Plant cell 2007;19(12):3853-63.
2007: Weichang Yu; Fangpu Han; James A Birchler
Engineered minichromosomes in plants.
Current opinion in biotechnology 2007;18(5):425-31.
2007: Jonathan C Lamb; Julie M Meyer; James A Birchler
A hemicentric inversion in the maize line knobless Tama flint created two sites of centromeric elements and moved the kinetochore-forming region.
Chromosoma 2007;116(3):237-47.
2007: Weichang Yu; Fangpu Han; Zhi Gao; Juan M Vega; James A Birchler
Construction and behavior of engineered minichromosomes in maize.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(21):8924-9.
2007: James A Birchler; Hong Yao; Siva Chudalayandi
Biological consequences of dosage dependent gene regulatory systems.
Biochimica et biophysica acta 2007;1769(5-6):422-8.
2007: Jonathan C Lamb; Weichang Yu; Fangpu Han; James A Birchler
Plant chromosomes from end to end: telomeres, heterochromatin and centromeres.
Current opinion in plant biology 2007;10(2):116-22.
2007: Jonathan C Lamb; Tatiana Danilova; Matthew J Bauer; Julie M Meyer; Jennifer J Holland; Michael D Jensen; James A Birchler
Single-gene detection and karyotyping using small-target fluorescence in situ hybridization on maize somatic chromosomes.
Genetics 2007;175(3):1047-58.
2007: Fangpu Han; Jonathan C Lamb; Weichang Yu; Zhi Gao; James A Birchler
Centromere function and nondisjunction are independent components of the maize B chromosome accumulation mechanism.
The Plant cell 2007;19(2):524-33.
2007: James A Birchler; Reiner A Veitia
The gene balance hypothesis: from classical genetics to modern genomics.
The Plant cell 2007;19(2):395-402.
2007: Jonathan C Lamb; Nicole C Riddle; Ya-Ming Cheng; James Theuri; James A Birchler
Localization and transcription of a retrotransposon-derived element on the maize B chromosome.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2007;15(3):383-98.
2007: Jonathan C Lamb; Julie M Meyer; Blake Corcoran; Akio Kato; Fangpu Han; James A Birchler
Distinct chromosomal distributions of highly repetitive sequences in maize.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2007;15(1):33-49.
2007: Weichang Yu; Jonathan C Lamb; Fangpu Han; James A Birchler
Cytological visualization of DNA transposons and their transposition pattern in somatic cells of maize.
Genetics 2007;175(1):31-9.
2006: Nicole C Riddle; Akio Kato; James A Birchler
Genetic variation for the response to ploidy change in Zea mays L.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2006;114(1):101-11.
2006: Weichang Yu; Jonathan C Lamb; Fangpu Han; James A Birchler
Telomere-mediated chromosomal truncation in maize.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(46):17331-6.
2006: Manika Pal-Bhadra; Utpal Bhadra; James A Birchler
Misregulation of sex-lethal and disruption of male-specific lethal complex localization in Drosophila species hybrids.
Genetics 2006;174(3):1151-9.
2006: Matthew J Bauer; James A Birchler
Organization of endoreduplicated chromosomes in the endosperm of Zea mays L.
Chromosoma 2006;115(5):383-94.
2006: Harsh H Kavi; Harvey R Fernandez; Weiwu Xie; James A Birchler
Polycomb, pairing and PIWI--RNA silencing and nuclear interactions.
Trends in biochemical sciences 2006;31(9):485-7.
2006: James A Birchler; Hong Yao; Sivanandan Chudalayandi
Unraveling the genetic basis of hybrid vigor.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(35):12957-8.
2006: Weichang Yu; Fangpu Han; Akio Kato; James A Birchler
Characterization of a maize isochromosome 8S*8S.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 2006;49(6):700-6.
2006: James A Birchler; Harvey R Fernandez; Harsh H Kavi
Commonalities in compensation.
BioEssays : news and reviews in molecular, cellular and developmental biology 2006;28(6):565-8.
2006: Jonathan C Lamb; James A Birchler
Retroelement genome painting: cytological visualization of retroelement expansions in the genera Zea and Tripsacum.
Genetics 2006;173(2):1007-21.
2006: Akio Kato; P S Albert; Juan M Vega; James A Birchler
Sensitive fluorescence in situ hybridization signal detection in maize using directly labeled probes produced by high concentration DNA polymerase nick translation.
Biotechnic & histochemistry : official publication of the Biological Stain Commission 2006;81(2-3):71-8.
2006: Fangpu Han; Jonathan C Lamb; James A Birchler
High frequency of centromere inactivation resulting in stable dicentric chromosomes of maize.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(9):3238-43.
2006: Akio Kato; James A Birchler
Induction of tetraploid derivatives of maize inbred lines by nitrous oxide gas treatment.
The Journal of heredity 2006;97(1):39-44.
2005: Harsh H Kavi; Weiwu Xie; Harvey R Fernandez; James A Birchler
Global analysis of siRNA-mediated transcriptional gene silencing.
BioEssays : news and reviews in molecular, cellular and developmental biology 2005;27(12):1209-12.
2005: Harsh H Kavi; Harvey R Fernandez; Weiwu Xie; James A Birchler
RNA silencing in Drosophila.
FEBS letters 2005;579(26):5940-9.
2005: Donald L Auger; E M Peters; James A Birchler
A genetic test of bioactive gibberellins as regulators of heterosis in maize.
The Journal of heredity 2005;96(5):614-7.
2005: Chris B Della Vedova; René Lorbiecke; Helene Kirsch; Michael B Schulte; Kay Scheets; Lutz M Borchert; Brian E Scheffler; Udo Wienand; Karen Cone; James A Birchler
The dominant inhibitory chalcone synthase allele C2-Idf (inhibitor diffuse) from Zea mays (L.) acts via an endogenous RNA silencing mechanism.
Genetics 2005;170(4):1989-2002.
2005: Thomas Ream; Jonathan Strobel; Brandon Roller; Donald L Auger; Akio Kato; Cynthia Halbrook; Eric M Peters; James Theuri; Matthew J Bauer; Prince Addae; Waly Dioh; Jeffrey M Staub; Larry Gilbertson; James A Birchler
A test for ectopic exchange catalyzed by Cre recombinase in maize.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2005;111(2):378-85.
2005: Weiwei Jin; Jonathan C Lamb; Juan M Vega; R Kelly Dawe; James A Birchler; Jiming Jiang
Molecular and functional dissection of the maize B chromosome centromere.
The Plant cell 2005;17(5):1412-23.
2005: James A Birchler; Nicole C Riddle; Donald L Auger; Reiner A Veitia
Dosage balance in gene regulation: biological implications.
Trends in genetics : TIG 2005;21(4):219-26.
2005: Akio Kato; Juan M Vega; Fangpu Han; Jonathan C Lamb; James A Birchler
Advances in plant chromosome identification and cytogenetic techniques.
Current opinion in plant biology 2005;8(2):148-54.
2005: Manika Pal Bhadra; Utpal Bhadra; Joydeep Kundu; James A Birchler
Gene expression analysis of the function of the male-specific lethal complex in Drosophila.
Genetics 2005;169(4):2061-74.
2005: Harvey R Fernandez; Harsh H Kavi; Weiwu Xie; James A Birchler
Heterochromatin: on the ADAR radar?
Current biology : CB 2005;15(4):R132-4.
2005: Jonathan C Lamb; Akio Kato; James A Birchler
Sequences associated with A chromosome centromeres are present throughout the maize B chromosome.
Chromosoma 2005;113(7):337-49.
2005: James Theuri; TL Phelps-Durr; S Mathews; James A Birchler
A comparative study of retrotransposons in the centromeric regions of A and B chromosomes of maize.
Cytogenetic and genome research 2005;110(1-4):203-8.
2005: Akio Kato; Y-Z Zheng; Donald L Auger; TL Phelps-Durr; Matthew J Bauer; Jonathan C Lamb; James A Birchler
Minichromosomes derived from the B chromosome of maize.
Cytogenetic and genome research 2005;109(1-3):156-65.
2005: Donald L Auger; Anjali Dogra Gray; Thomas Ream; Akio Kato; Edward H Coe; James A Birchler
Nonadditive gene expression in diploid and triploid hybrids of maize.
Genetics 2005;169(1):389-97.
2004: James A Birchler; Harsh H Kavi; Harvey R Fernandez
Heterochromatin: RNA points the way.
Current biology : CB 2004;14(18):R759-61.
2004: Akio Kato; Jonathan C Lamb; James A Birchler
Chromosome painting using repetitive DNA sequences as probes for somatic chromosome identification in maize.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(37):13554-9.
2004: Donald L Auger; Thomas Ream; James A Birchler
A test for a metastable epigenetic component of heterosis using haploid induction in maize.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2004;108(6):1017-23.
2004: Manika Pal-Bhadra; Boris A Leibovitch; Sumit G Gandhi; Madhusudana Rao; Utpal Bhadra; James A Birchler; Sarah C R Elgin
Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery.
Science (New York, N.Y.) 2004;303(5658):669-72.
2004: Manika Pal-Bhadra; Utpal Bhadra; James A Birchler
Interrelationship of RNA interference and transcriptional gene silencing in Drosophila.
Cold Spring Harbor symposia on quantitative biology 2004;69():433-8.
2004: Jonathan C Lamb; James Theuri; James A Birchler
What's in a centromere?
Genome biology 2004;5(9):239.
2004: TL Phelps-Durr; James A Birchler
An asymptotic determination of minimum centromere size for the maize B chromosome.
Cytogenetic and genome research 2004;106(2-4):309-13.
2004: James A Birchler; Kathleen J Newton
Discovering the seeds of diversity in plant genomes.
Genome biology 2004;5(5):323.
2003: Jiming Jiang; James A Birchler; Wayne A Parrott; R Kelly Dawe
A molecular view of plant centromeres.
Trends in plant science 2003;8(12):570-5.
2003: Nicole C Riddle; James A Birchler
Effects of reunited diverged regulatory hierarchies in allopolyploids and species hybrids.
Trends in genetics : TIG 2003;19(11):597-600.
2003: James A Birchler; Donald L Auger; Nicole C Riddle
In search of the molecular basis of heterosis.
The Plant cell 2003;15(10):2236-9.
2003: James A Birchler; R Kelly Dawe; John Doebley
Marcus rhoades, preferential segregation and meiotic drive.
Genetics 2003;164(3):835-41.
2003: James A Birchler; Manika Pal-Bhadra; Utpal Bhadra
Dosage dependent gene regulation and the compensation of the X chromosome in Drosophila males.
Genetica 2003;117(2-3):179-90.
2003: Thomas C Osborn; J Chris Pires; James A Birchler; Donald L Auger; Z Jeffery Chen; Hyeon-Se Lee; Luca Comai; Andreas Madlung; Rebecca W Doerge; Vincent Colot; Robert A Martienssen
Understanding mechanisms of novel gene expression in polyploids.
Trends in genetics : TIG 2003;19(3):141-7.
2003: Jonathan C Lamb; James A Birchler
The role of DNA sequence in centromere formation.
Genome biology 2003;4(5):214.
2002: Cathy X Zhong; Joshua B Marshall; Christopher N Topp; Rebecca J Mroczek; Akio Kato; Kiyotaka Nagaki; James A Birchler; Jiming Jiang; R Kelly Dawe
Centromeric retroelements and satellites interact with maize kinetochore protein CENH3.
The Plant cell 2002;14(11):2825-36.
2002: Etienne Kaszás; Akio Kato; James A Birchler
Cytological and molecular analysis of centromere misdivision in maize.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 2002;45(4):759-68.
2002: Manika Pal-Bhadra; Utpal Bhadra; James A Birchler
RNAi related mechanisms affect both transcriptional and posttranscriptional transgene silencing in Drosophila.
Molecular cell 2002;9(2):315-27.
2002: Donald L Auger; James A Birchler
Maize tertiary trisomic stocks derived from B-A translocations.
The Journal of heredity 2002;93(1):42-7.
2001: B T Page; M K Wanous; James A Birchler
Characterization of a maize chromosome 4 centromeric sequence: evidence for an evolutionary relationship with the B chromosome centromere.
Genetics 2001;159(1):291-302.
2001: James A Birchler; Utpal Bhadra; Manika Pal Bhadra; Donald L Auger
Dosage-dependent gene regulation in multicellular eukaryotes: implications for dosage compensation, aneuploid syndromes, and quantitative traits.
Developmental biology 2001;234(2):275-88.
2001: Maxim Frolov; Elizaveta V. Benevolenskay; James A Birchler
Molecular analysis of a novel Drosophila diacylglycerol kinase, DGKepsilon.
Biochimica et biophysica acta 2001;1538(2-3):339-52.
2001: Donald L Auger; Kathleen J Newton; James A Birchler
Nuclear gene dosage effects upon the expression of maize mitochondrial genes.
Genetics 2001;157(4):1711-21.
2000: Maxim Frolov; Elizaveta V. Benevolenskay; James A Birchler
The oxen gene of Drosophila encodes a homolog of subunit 9 of yeast ubiquinol-cytochrome c oxidoreductase complex: evidence for modulation of gene expression in response to mitochondrial activity.
Genetics 2000;156(4):1727-36.
2000: Utpal Bhadra; Manika Pal-Bhadra; James A Birchler
Histone acetylation and gene expression analysis of sex lethal mutants in Drosophila.
Genetics 2000;155(2):753-63.
2000: Elizaveta V. Benevolenskay; Maxim Frolov; James A Birchler
Krüppel homolog (Kr h) is a dosage-dependent modifier of gene expression in Drosophila.
Genetical research 2000;75(2):137-42.
2000: James A Birchler; Manika Pal Bhadra; Utpal Bhadra
Making noise about silence: repression of repeated genes in animals.
Current opinion in genetics & development 2000;10(2):211-6.
1999: Manika Pal-Bhadra; Utpal Bhadra; James A Birchler
Cosuppression of nonhomologous transgenes in Drosophila involves mutually related endogenous sequences.
Cell 1999;99(1):35-46.
1999: Utpal Bhadra; Manika Pal-Bhadra; James A Birchler
Role of the male specific lethal (msl) genes in modifying the effects of sex chromosomal dosage in Drosophila.
Genetics 1999;152(1):249-68.
1998: E Kaszás; James A Birchler
Meiotic transmission rates correlate with physical features of rearranged centromeres in maize.
Genetics 1998;150(4):1683-92.
1998: Maxim Frolov; James A Birchler
Mutation in P0, a dual function ribosomal protein/apurinic/apyrimidinic endonuclease, modifies gene expression and position effect variegation in Drosophila.
Genetics 1998;150(4):1487-95.
1998: Elizaveta V. Benevolenskay; Maxim Frolov; James A Birchler
The sugarless mutation affects the expression of the white eye color gene in Drosophila melanogaster.
Molecular & general genetics : MGG 1998;260(2-3):131-43.
1998: Utpal Bhadra; Manika Pal Bhadra; James A Birchler
Interactions among dosage-dependent trans-acting modifiers of gene expression and position-effect variegation in Drosophila.
Genetics 1998;150(1):251-63.
1998: Manika Pal-Bhadra; Utpal Bhadra; James A Birchler
Role of multiple trans-acting regulators in modifying the effect of the retrotransposon copia on host gene expression in Drosophila.
Molecular & general genetics : MGG 1998;259(2):198-206.
1998: Maxim Frolov; Elizaveta V. Benevolenskay; James A Birchler
Regena (Rga), a Drosophila homolog of the global negative transcriptional regulator CDC36 (NOT2) from yeast, modifies gene expression and suppresses position effect variegation.
Genetics 1998;148(1):317-29.
1997: James A Birchler
Do these sequences make CENs yet?
Genome research 1997;7(11):1035-7.
1997: Manika Pal-Bhadra; Utpal Bhadra; James A Birchler
Cosuppression in Drosophila: gene silencing of Alcohol dehydrogenase by white-Adh transgenes is Polycomb dependent.
Cell 1997;90(3):479-90.
1997: Utpal Bhadra; Manika Pal-Bhadra; James A Birchler
A sex-influenced modifier in Drosophila that affects a broad spectrum of target loci including the histone repeats.
Genetics 1997;146(3):903-17.
1997: Utpal Bhadra; Manika Pal-Bhadra; James A Birchler
A trans-acting modifier causing extensive overexpression of genes in Drosophila melanogaster.
Molecular & general genetics : MGG 1997;254(6):621-34.
1996: E Kaszás; James A Birchler
Misdivision analysis of centromere structure in maize.
The EMBO journal 1996;15(19):5246-55.
1996: M Guo; D Davis; James A Birchler
Dosage effects on gene expression in a maize ploidy series.
Genetics 1996;142(4):1349-55.
1996: Utpal Bhadra; James A Birchler
Characterization of a sex-influenced modifier of gene expression and suppressor of position-effect variegation in Drosophila.
Molecular & general genetics : MGG 1996;250(5):601-13.
1994: Amy K. Csink; R Linsk; James A Birchler
The Lighten up (Lip) gene of Drosophila melanogaster, a modifier of retroelement expression, position effect variegation and white locus insertion alleles.
Genetics 1994;138(1):153-63.
1994: James A Birchler; Utpal Bhadra; L Rabinow; R Linsk; Anh T Nguyen-Huynh
Weakener of white (Wow), a gene that modifies the expression of the white eye color locus and that suppresses position effect variegation in Drosophila melanogaster.
Genetics 1994;137(4):1057-70.
1994: J C Hiebert; James A Birchler
Effects of the maleless mutation on X and autosomal gene expression in Drosophila melanogaster.
Genetics 1994;136(3):913-26.
1994: Amy K. Csink; R Linsk; James A Birchler
Mosaic suppressor, a gene in Drosophila that modifies retrotransposon expression and interacts with zeste.
Genetics 1994;136(2):573-83.
1993: M R Alfenito; James A Birchler
Molecular characterization of a maize B chromosome centric sequence.
Genetics 1993;135(2):589-97.
1993: J F Sabl; James A Birchler
Dosage dependent modifiers of white alleles in Drosophila melanogaster.
Genetical research 1993;62(1):15-22.
1993: L Rabinow; S L Chiang; James A Birchler
Mutations at the Darkener of apricot locus modulate transcript levels of copia and copia-induced mutations in Drosophila melanogaster.
Genetics 1993;134(4):1175-85.
1993: James A Birchler
Dosage analysis of maize endosperm development.
Annual review of genetics 1993;27():181-204.
1992: J C Hiebert; James A Birchler
Dosage compensation of the copia retrotransposon in Drosophila melanogaster.
Genetics 1992;130(3):539-45.
1992: James A Birchler
Expression of cis-regulatory mutations of the white locus in metafemales of Drosophila melanogaster.
Genetical research 1992;59(1):11-8.
1991: L Rabinow; Anh T Nguyen-Huynh; James A Birchler
A trans-acting regulatory gene that inversely affects the expression of the white, brown and scarlet loci in Drosophila.
Genetics 1991;129(2):463-80.
1991: James A Birchler; D M Levin
Directed synthesis of a segmental chromosomal transposition: an approach to the study of chromosomes lethal to the gametophyte generation of maize.
Genetics 1991;127(3):609-18.
1990: James A Birchler; D J Chalfoun; D M Levin
Recombination in the B chromosome of maize to produce A-B-A chromosomes.
Genetics 1990;126(3):723-33.
1990: James A Birchler
Amaizing results.
Trends in genetics : TIG 1990;6(8):231-3.
1990: L Rabinow; James A Birchler
Interactions among modifiers of retrotransposon-induced alleles of the white locus of Drosophila melanogaster.
Genetical research 1990;55(3):141-51.
1990: L Rabinow; James A Birchler
Interactions of vestigial and scabrous with the Notch locus of Drosophila melanogaster.
Genetics 1990;125(1):41-50.
1990: James A Birchler; J C Hiebert; K Paigen
Analysis of autosomal dosage compensation involving the alcohol dehydrogenase locus in Drosophila melanogaster.
Genetics 1990;124(3):679-86.
1989: James A Birchler; J C Hiebert; M Krietzman
Gene expression in adult metafemales of Drosophila melanogaster.
Genetics 1989;122(4):869-79.
1989: James A Birchler; J C Hiebert
Interaction of the Enhancer of white-apricot with transposable element alleles at the white locus in Drosophila melanogaster.
Genetics 1989;122(1):129-38.
1989: L Rabinow; James A Birchler
A dosage-sensitive modifier of retrotransposon-induced alleles of the Drosophila white locus.
The EMBO journal 1989;8(3):879-89.
1989: James A Birchler; J C Hiebert; L Rabinow
Interaction of the mottler of white with transposable element alleles at the white locus in Drosophila melanogaster.
Genes & development 1989;3(1):73-84.
1987: James A Birchler; J R Hart
Interaction of endosperm size factors in maize.
Genetics 1987;117(2):309-17.