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Rimma Samoilova

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Electron Spin Resonance Spectroscopy

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Myat T Lin; Chad M Rienstra; Rimma I Samoilova; Lindsay J Sperling; Ming Tang; Sergei Dikanov; Heather L Frericks Schmidt; Toshio Iwasaki; Takashi Kumasaka; Robert B Gennis
A rapid and robust method for selective isotope labeling of proteins.
Rimma I Samoilova; Antony R Crofts; Sergei Dikanov
Reaction of superoxide radical with quinone molecules.
Dmitriy Lukoyanov; Kuppala V Narasimhulu; Rimma I Samoilova; Lance C Seefeldt; Zhi-Yong Yang; Brett M Barney; Dennis R Dean; Sergei Dikanov; Brian M Hoffman
ENDOR/HYSCORE studies of the common intermediate trapped during nitrogenase reduction of N2H2, CH3N2H, and N2H4 support an alternating reaction pathway for N2 reduction.

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2011: Myat T Lin; Chad M Rienstra; Rimma I Samoilova; Lindsay J Sperling; Ming Tang; Sergei Dikanov; Heather L Frericks Schmidt; Toshio Iwasaki; Takashi Kumasaka; Robert B Gennis
A rapid and robust method for selective isotope labeling of proteins.
Methods (San Diego, Calif.) 2011;55(4):370-8.
2011: Rimma I Samoilova; Antony R Crofts; Sergei Dikanov
Reaction of superoxide radical with quinone molecules.
The journal of physical chemistry. A 2011;115(42):11589-93.
2011: Dmitriy Lukoyanov; Kuppala V Narasimhulu; Rimma I Samoilova; Lance C Seefeldt; Zhi-Yong Yang; Brett M Barney; Dennis R Dean; Sergei Dikanov; Brian M Hoffman
ENDOR/HYSCORE studies of the common intermediate trapped during nitrogenase reduction of N2H2, CH3N2H, and N2H4 support an alternating reaction pathway for N2 reduction.
Journal of the American Chemical Society 2011;133(30):11655-64.
2011: Erik Martin; Rimma I Samoilova; Kuppala V Narasimhulu; Tzu-Jen Lin; Patrick J O'Malley; Colin A Wraight; Sergei Dikanov
Hydrogen bonding and spin density distribution in the Qb semiquinone of bacterial reaction centers and comparison with the Qa site.
Journal of the American Chemical Society 2011;133(14):5525-37.
2011: Myat T Lin; Alexander A Shubin; Rimma I Samoilova; Kuppala V Narasimhulu; Amgalanbaatar Baldansuren; Robert B Gennis; Sergei A Dikanov
Exploring by pulsed EPR the electronic structure of ubisemiquinone bound at the QH site of cytochrome bo3 from Escherichia coli with in vivo 13C-labeled methyl and methoxy substituents.
The Journal of biological chemistry 2011;286(12):10105-14.
2010: Lai Lai Yap; Myat T Lin; Hanlin Ouyang; Rimma I Samoilova; Sergei Dikanov; Robert B Gennis
The quinone-binding sites of the cytochrome bo3 ubiquinol oxidase from Escherichia coli.
Biochimica et biophysica acta 2010;1797(12):1924-32.
2010: Erik Martin; Rimma I Samoilova; Kupala V Narasimhulu; Colin A Wraight; Sergei A Dikanov
Hydrogen bonds between nitrogen donors and the semiquinone in the Q(B) site of bacterial reaction centers.
Journal of the American Chemical Society 2010;132(33):11671-7.
2010: Sophia M Yi; Kuppala V Narasimhulu; Rimma I Samoilova; Robert B Gennis; Sergei Dikanov
Characterization of the semiquinone radical stabilized by the cytochrome aa3-600 menaquinol oxidase of Bacillus subtilis.
The Journal of biological chemistry 2010;285(24):18241-51.
2009: Toshio Iwasaki; Rimma I Samoilova; Asako Kounosu; Sergei Dikanov
Two-dimensional pulsed electron spin resonance characterization of 15N-labeled archaeal Rieske-type ferredoxin.
FEBS letters 2009;583(21):3467-72.
2009: Toshio Iwasaki; Rimma I Samoilova; Asako Kounosu; Daijiro Ohmori; Sergei Dikanov
Continuous-wave and pulsed EPR characterization of the [2Fe-2S](Cys)3(His)1 cluster in rat MitoNEET.
Journal of the American Chemical Society 2009;131(38):13659-67.
2009: Nikita A Kuznetsov; Alexandr D Milov; Vladimir V Koval; Rimma I Samoilova; Yuri A Grishin; Dmitry G Knorre; Yuri D Tsvetkov; Olga S Fedorova; Sergei A Dzuba
PELDOR study of conformations of double-spin-labeled single- and double-stranded DNA with non-nucleotide inserts.
Physical chemistry chemical physics : PCCP 2009;11(31):6826-32.
2009: Sergei Dikanov; Rimma I Samoilova; Reinhard Kappl; Antony R Crofts; Jürgen Hüttermann
The reduced [2Fe-2S] clusters in adrenodoxin and Arthrospira platensis ferredoxin share spin density with protein nitrogens, probed using 2D ESEEM.
Physical chemistry chemical physics : PCCP 2009;11(31):6807-19.
2009: Alexander D Milov; Rimma I Samoilova; Yu D Tsvetkov; Marta De Zotti; Fernando Formaggio; Claudio Toniolo; Jan-Willem Handgraaf; Jan Raap
Structure of self-aggregated alamethicin in ePC membranes detected by pulsed electron-electron double resonance and electron spin echo envelope modulation spectroscopies.
Biophysical journal 2009;96(8):3197-209.
2009: Derrick R J Kolling; Rimma I Samoilova; Alexander A Shubin; Antony R Crofts; Sergei Dikanov
Proton environment of reduced Rieske iron-sulfur cluster probed by two-dimensional ESEEM spectroscopy.
The journal of physical chemistry. A 2009;113(4):653-67.
2008: Alexander D Milov; Rimma I Samoilova; Yuri D Tsvetkov; Marta De Zotti; Claudio Toniolo; Jan Raap
PELDOR conformational analysis of bis-labeled alamethicin aggregated in phospholipid vesicles.
The journal of physical chemistry. B 2008;112(43):13469-72.
2007: Sergei Dikanov; J Todd Holland; Burkhard Endeward; Derrick R J Kolling; Rimma I Samoilova; Thomas F Prisner; Antony R Crofts
Hydrogen bonds between nitrogen donors and the semiquinone in the Qi-site of the bc1 complex.
The Journal of biological chemistry 2007;282(35):25831-41.
2007: Alexander D Milov; Rimma I Samoilova; Yu D Tsvetkov; Fernando Formaggio; Claudio Toniolo; Jan Raap
Self-aggregation of spin-labeled alamethicin in ePC vesicles studied by pulsed electron - electron double resonance.
Journal of the American Chemical Society 2007;129(30):9260-1.
2007: Lai Lai Yap; Rimma I Samoilova; Robert B Gennis; Sergei Dikanov
Characterization of mutants that change the hydrogen bonding of the semiquinone radical at the QH site of the cytochrome bo3 from Escherichia coli.
The Journal of biological chemistry 2007;282(12):8777-85.
2006: Sergei Dikanov; Derrick R J Kolling; Burkhard Endeward; Rimma I Samoilova; Thomas F Prisner; Satish K Nair; Antony R Crofts
Identification of hydrogen bonds to the Rieske cluster through the weakly coupled nitrogens detected by electron spin echo envelope modulation spectroscopy.
The Journal of biological chemistry 2006;281(37):27416-25.
2006: Lai Lai Yap; Rimma I Samoilova; Robert B Gennis; Sergei Dikanov
Characterization of the exchangeable protons in the immediate vicinity of the semiquinone radical at the QH site of the cytochrome bo3 from Escherichia coli.
The Journal of biological chemistry 2006;281(25):16879-87.
2006: Toshio Iwasaki; Asako Kounosu; Rimma I Samoilova; Sergei Dikanov
15N HYSCORE characterization of the fully deprotonated, reduced form of the archaeal Rieske [2Fe-2S] center.
Journal of the American Chemical Society 2006;128(7):2170-1.
2004: Toshio Iwasaki; Asako Kounosu; Taketoshi Uzawa; Rimma I Samoilova; Sergei Dikanov
Orientation-selected 15N-HYSCORE detection of weakly coupled nitrogens around the archaeal rieske [2Fe-2S] center.
Journal of the American Chemical Society 2004;126(43):13902-3.
2004: Sergei Dikanov; Alexandr A Shubin; Asako Kounosu; Toshio Iwasaki; Rimma I Samoilova
A comparative, two-dimensional 14N ESEEM characterization of reduced [2Fe-2S] clusters in hyperthermophilic archaeal high- and low-potential Rieske-type proteins.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2004;9(6):753-67.
2004: Sergei Dikanov; Rimma I Samoilova; Derrick R J Kolling; J Todd Holland; Antony R Crofts
Hydrogen bonds involved in binding the Qi-site semiquinone in the bc1 complex, identified through deuterium exchange using pulsed EPR.
The Journal of biological chemistry 2004;279(16):15814-23.
2003: Derrick R J Kolling; Rimma I Samoilova; J Todd Holland; Edward A Berry; Sergei Dikanov; Antony R Crofts
Exploration of ligands to the Qi site semiquinone in the bc1 complex using high-resolution EPR.
The Journal of biological chemistry 2003;278(41):39747-54.
2002: Antony R Crofts; Vladimir P Shinkarev; Sergei Dikanov; Rimma I Samoilova; Derrick R J Kolling
Interactions of quinone with the iron-sulfur protein of the bc(1) complex: is the mechanism spring-loaded?
Biochimica et biophysica acta 2002;1555(1-3):48-53.
2002: Rimma I Samoilova; Derrick R J Kolling; Taketoshi Uzawa; Toshio Iwasaki; Antony R Crofts; Sergei Dikanov
The interaction of the Rieske iron-sulfur protein with occupants of the Qo-site of the bc1 complex, probed by electron spin echo envelope modulation.
The Journal of biological chemistry 2002;277(7):4605-8.
2000: Alexander D Milov; A G Mar'yasov; Rimma I Samoilova; Yu D Tsvetkov; Jan Raap; V Monaco; Fernando Formaggio; Marco Crisma; Claudio Toniolo
Pulsed electron double resonance of spin-labeled peptides: data on the peptide-chain secondary structure.
Doklady biochemistry : proceedings of the Academy of Sciences of the USSR, Biochemistry section / translated from Russian 2000;370(1-6):8-11.