FIND

researchers

DISCOVER

relevant articles

PROMOTE

your research

now for free

Albin Sandelin

Research Profile

Chemicals & Drugs

Genes & Molecular Sequences

Occupations

Physiology

Concepts & Ideas

Co-author Network

Publications

TOP 3
Xiaobei Zhao; Albin Sandelin
GMD: measuring the distance between histograms with applications on high-throughput sequencing reads.
Boris Lenhard; Albin Sandelin; piero carninci
Metazoan promoters: emerging characteristics and insights into transcriptional regulation.
Andrea Pauli; Aviv Regev; John L Rinn; Albin Sandelin; Lin Fan; Manuel Garber; Joshua Z Levin; Michael F Lin; Eivind Valen; Nadine L Vastenhouw; Alexander F Schier
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.

Register for free to view:

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the research activity
of experts around the globe

Geonetwork of Albin Sandelin (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

All Publications

2012: Xiaobei Zhao; Albin Sandelin
GMD: measuring the distance between histograms with applications on high-throughput sequencing reads.
Bioinformatics (Oxford, England) 2012;28(8):1164-5.
2012: Boris Lenhard; Albin Sandelin; piero carninci
Metazoan promoters: emerging characteristics and insights into transcriptional regulation.
Nature reviews. Genetics 2012;13(4):233-45.
2012: Andrea Pauli; Aviv Regev; John L Rinn; Albin Sandelin; Lin Fan; Manuel Garber; Joshua Z Levin; Michael F Lin; Eivind Valen; Nadine L Vastenhouw; Alexander F Schier
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.
Genome research 2012;22(3):577-91.
2011: Eivind Valen; Albin Sandelin
Genomic and chromatin signals underlying transcription start-site selection.
Trends in genetics : TIG 2011;27(11):475-85.
2011: Eivind Valen; Xiaobei Zhao; Gunter Meister; Pascal Preker; Albin Sandelin; Peter Refsing Andersen; Yun Chen; Anne Dueck; Christine Ender; Torben Heick Jensen
Biogenic mechanisms and utilization of small RNAs derived from human protein-coding genes.
Nature structural & molecular biology 2011;18(9):1075-82.
2011: Pascal Preker; Albin Sandelin; Eivind Valen; Kristina Almvig; Marianne S Christensen; Christophe K Mapendano; Torben Heick Jensen
PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters.
Nucleic acids research 2011;39(16):7179-93.
2011: Yun Chen; Mette Jørgensen; Raivo Kolde; Brian Parker; Eivind Valen; Jiayu Wen; Xiaobei Zhao; Albin Sandelin
Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data.
BMC genomics 2011;12():544.
2011: Xiaobei Zhao; Eivind Valen; Brian J Parker; Albin Sandelin
Systematic clustering of transcription start site landscapes.
PloS one 2011;6(8):e23409.
2010: T T Marstrand; Rehannah Borup; A Willer; Niels Borregaard; Albin Sandelin; Bo T Porse; Kim Theilgaard-Mönch
A conceptual framework for the identification of candidate drugs and drug targets in acute promyelocytic leukemia.
Leukemia 2010;24(7):1265-75.
2010: Lisbeth Carstensen; Albin Sandelin; Ole Winther; Niels R Hansen
Multivariate Hawkes process models of the occurrence of regulatory elements.
BMC bioinformatics 2010;11():456.
2010: Jesper Ryge; Ole Winther; Jacob Wienecke; Albin Sandelin; Ann-Charlotte Westerdahl; Hans Hultborn; Ole Kiehn
Transcriptional regulation of gene expression clusters in motor neurons following spinal cord injury.
BMC genomics 2010;11():365.
2010: Elodie Portales-Casamar; Supat Thongjuea; Andrew T Kwon; David J Arenillas; Xiaobei Zhao; Eivind Valen; Dimas Yusuf; Boris Lenhard; Wyeth W Wasserman; Albin Sandelin
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles.
Nucleic acids research 2010;38(Database issue):D105-10.
2009: Eivind Valen; Albin Sandelin; Ole Winther; Anders Krogh
Discovery of regulatory elements is improved by a discriminatory approach.
PLoS computational biology 2009;5(11):e1000562.
2009: Eivind Valen; Giovanni Pascarella; Alistair Chalk; Norihiro Maeda; Miki Kojima; Chika Kawazu; Mitsuyoshi Murata; Hiromi Nishiyori; Dejan Lazarevic; Dario Motti; Troels Torben Marstrand; Man-Hung Eric Tang; Xiaobei Zhao; Anders Krogh; Ole Winther; Takahiro Arakawa; Jun Kawai; Christine Wells; Carsten Daub; Matthias Harbers; Yoshihide Hayashizaki; Stefano Gustincich; Albin Sandelin; piero carninci
Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE.
Genome research 2009;19(2):255-65.
2008: Kyoung-Jae Won; Albin Sandelin; Troels Torben Marstrand; Anders Krogh
Modeling promoter grammars with evolving hidden Markov models.
Bioinformatics (Oxford, England) 2008;24(15):1669-75.
2008: Yawen Liu; Hui Gao; Troels Torben Marstrand; Anders Ström; Eivind Valen; Albin Sandelin; Jan-�ke GUSTAFSSON; Karin Dahlman-Wright
The genome landscape of ERalpha- and ERbeta-binding DNA regions.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(7):2604-9.
2008: Albin Sandelin
Prediction of regulatory elements.
Methods in molecular biology (Clifton, N.J.) 2008;453():233-44.
2008: Martin C Frith; Eivind Valen; Anders Krogh; Yoshihide Hayashizaki; piero carninci; Albin Sandelin
A code for transcription initiation in mammalian genomes.
Genome research 2008;18(1):1-12.
2008: Jan Christian Bryne; Eivind Valen; Man-Hung Eric Tang; Troels Marstrand; Ole Winther; Isabelle da Piedade; Anders Krogh; Boris Lenhard; Albin Sandelin
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update.
Nucleic acids research 2008;36(Database issue):D102-6.
2007: Albin Sandelin; piero carninci; Boris Lenhard; Jasmina Ponjavic; Yoshihide Hayashizaki; David A Hume
Mammalian RNA polymerase II core promoters: insights from genome-wide studies.
Nature reviews. Genetics 2007;8(6):424-36.
2006: Peter J Bailey; Joanna M Klos; Elisabet Andersson; Mattias Karlén; Magdalena Källström; Jasmina Ponjavic; Jonas Muhr; Boris Lenhard; Albin Sandelin; Johan Ericson
A global genomic transcriptional code associated with CNS-expressed genes.
Experimental cell research 2006;312(16):3108-19.
2006: Stefano Gustincich; Albin Sandelin; Charles Plessy; Shintaro Katayama; Roberto Simone; Dejan Lazarevic; Yoshihide Hayashizaki; piero carninci
The complexity of the mammalian transcriptome.
The Journal of physiology 2006;575(Pt 2):321-32.
2006: Martin C Frith; Jasmina Ponjavic; David Fredman; Chikatoshi Kai; Jun Kawai; piero carninci; Yoshihide Hayashizaki; Yoshihide Hayshizaki; Albin Sandelin
Evolutionary turnover of mammalian transcription start sites.
Genome research 2006;16(6):713-22.
2006: Hideya Kawaji; Martin C Frith; Shintaro Katayama; Albin Sandelin; Chikatoshi Kai; Jun Kawai; piero carninci; Yoshihide Hayashizaki
Dynamic usage of transcription start sites within core promoters.
Genome biology 2006;7(12):R118.
2006: Jasmina Ponjavic; Boris Lenhard; Chikatoshi Kai; Jun Kawai; piero carninci; Yoshihide Hayashizaki; Albin Sandelin
Transcriptional and structural impact of TATA-initiation site spacing in mammalian core promoters.
Genome biology 2006;7(8):R78.
2006: Dominique Vlieghe; Albin Sandelin; Pieter J De Bleser; Kris Vleminckx; Wyeth W Wasserman; Frans van Roy; Boris Lenhard
A new generation of JASPAR, the open-access repository for transcription factor binding site profiles.
Nucleic acids research 2006;34(Database issue):D95-7.
2005: Albin Sandelin; Wyeth W Wasserman
Prediction of nuclear hormone receptor response elements.
Molecular endocrinology (Baltimore, Md.) 2005;19(3):595-606.
2005: Nina Ståhlberg; Roxana Merino; Luis Henríquez Hernández; Leandro Fernández-Pérez; Albin Sandelin; Pär G Engström; Petra Tollet-Egnell; Boris Lenhard; Amilcar Flores-Morales
Exploring hepatic hormone actions using a compilation of gene expression profiles.
BMC physiology 2005;5(1):8.
2004: Albin Sandelin; Wyeth W Wasserman; Boris Lenhard
ConSite: web-based prediction of regulatory elements using cross-species comparison.
Nucleic acids research 2004;32(Web Server issue):W249-52.
2004: Albin Sandelin; Wyeth W Wasserman
Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics.
Journal of molecular biology 2004;338(2):207-15.
2004: Wyeth W Wasserman; Albin Sandelin
Applied bioinformatics for the identification of regulatory elements.
Nature reviews. Genetics 2004;5(4):276-87.
2004: Albin Sandelin; Peter Bailey; Sara Bruce; Pär G Engström; Joanna M Klos; Wyeth W Wasserman; Johan Ericson; Boris Lenhard
Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes.
BMC genomics 2004;5(1):99.
2004: Albin Sandelin; Wynand B L Alkema; Pär G Engström; Wyeth W Wasserman; Boris Lenhard
JASPAR: an open-access database for eukaryotic transcription factor binding profiles.
Nucleic acids research 2004;32(Database issue):D91-4.
2003: Albin Sandelin; Annette Höglund; Boris Lenhard; Wyeth W Wasserman
Integrated analysis of yeast regulatory sequences for biologically linked clusters of genes.
Functional & integrative genomics 2003;3(3):125-34.
2003: Boris Lenhard; Albin Sandelin; Luis Mendoza; Pär G Engström; Niclas Jareborg; Wyeth W Wasserman
Identification of conserved regulatory elements by comparative genome analysis.
Journal of biology 2003;2(2):13.