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Ben Scheres

Research Profile

Living Beings

Chemicals & Drugs

Physiology

Genes & Molecular Sequences

Genes, Plant

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Plant Development

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Stem Cells

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Publications

TOP 3
Klaartje van Berkel; Rob J De Boer; Ben Scheres; Kirsten Ten Tusscher
Polar auxin transport: models and mechanisms.
Klementina Kakar; Ben Scheres; Hongtao Zhang; Pankaj Dhonukshe
CLASP-mediated cortical microtubule organization guides PIN polarization axis.
Violaine Pinon; Kalika Prasad; Gabino F Sanchez-Perez; Stephen P Grigg; Ben Scheres
Local auxin biosynthesis regulation by PLETHORA transcription factors controls phyllotaxis in Arabidopsis.

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All Publications

2013: Klaartje van Berkel; Rob J De Boer; Ben Scheres; Kirsten Ten Tusscher
Polar auxin transport: models and mechanisms.
Development (Cambridge, England) 2013;140(11):2253-68.
2013: Klementina Kakar; Ben Scheres; Hongtao Zhang; Pankaj Dhonukshe
CLASP-mediated cortical microtubule organization guides PIN polarization axis.
Nature 2013;495(7442):529-33.
2013: Violaine Pinon; Kalika Prasad; Gabino F Sanchez-Perez; Stephen P Grigg; Ben Scheres
Local auxin biosynthesis regulation by PLETHORA transcription factors controls phyllotaxis in Arabidopsis.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(3):1107-12.
2012: Raffaele Dello Ioio; Alexander G Fletcher; Carla Galinha; Stephen P Grigg; Philip K Maini; Attila Molnar; Sabrina Sabatini; Ben Scheres; David Baulcombe; Viola Willemsen; Miltos Tsiantis
A PHABULOSA/cytokinin feedback loop controls root growth in Arabidopsis.
Current biology : CB 2012;22(18):1699-704.
2012: Massimiliano Sassi; Ben Scheres; Jan Traas; Teva Vernoux; Haiyang Wang; Juan Wang; Xuhong Yu; Yonghong Zhang; Ikram Blilou; Minqiu Dai; Pankaj Dhonukshe; Ximing Gong; Yvon Jaillais; Juan Li; Yanfen Lu; Ida Ruberti; Jian Xu
COP1 mediates the coordination of root and shoot growth by light through modulation of PIN1- and PIN2-dependent auxin transport in Arabidopsis.
Development (Cambridge, England) 2012;139(18):3402-12.
2012: Alfredo Cruz-Ramírez; Pankaj Dhonukshe; Sara Díaz-Triviño; Verônica A Grieneisen; Beatrix Horvath; Yuchen Long; Ari Pekka Mähönen; Athanasius F M Marée; Pál Miskolczi; James A H Murray; Jeroen Nieuwland; Laszlo Bako; Philip N Benfey; René Benjamins; Ikram Blilou; Juan Caballero-Pérez; Rosangela Sozzani; Jian Xu; Christos Zamioudis; Hongtao Zhang; Ben Scheres
A bistable circuit involving SCARECROW-RETINOBLASTOMA integrates cues to inform asymmetric stem cell division.
Cell 2012;150(5):1002-15.
2012: Deshu Lin; Shingo Nagawa; Ben Scheres; Tongda Xu; Chizuko Yamamuro; Lingyan Cao; Jisheng Chen; Xu Chen; Pankaj Dhonukshe; Jirí Friml; Ying Fu; Hongjiang Li; Zhenbiao Yang
A ROP GTPase-dependent auxin signaling pathway regulates the subcellular distribution of PIN2 in Arabidopsis roots.
Current biology : CB 2012;22(14):1319-25.
2012: Pankaj Dhonukshe; Renze Heidstra; Klementina Kakar; Marijn Luijten; Yasunori Machida; Ari Pekka Mähönen; Bela M Mulder; Kalika Prasad; Michiko Sasabe; Chris Ambrose; Tom Bennett; Alfredo Cruz-Ramirez; Eva E Deinum; Simon H Tindemans; Guy Wachsmann; Geoffrey Wasteneys; Daan A Weits; Ben Scheres
A PLETHORA-auxin transcription module controls cell division plane rotation through MAP65 and CLASP.
Cell 2012;149(2):383-96.
2012: Verônica A Grieneisen; Paulien Hogeweg; Ben Scheres; Athanasius F M Marée
Morphogengineering roots: comparing mechanisms of morphogen gradient formation.
BMC systems biology 2012;6():37.
2012: Shingo Nagawa; Ben Scheres; Tongda Xu; Pankaj Dhonukshe; Jirí Friml; Ying Fu; Deshu Lin; Xingxing Zhang; Zhenbiao Yang
ROP GTPase-dependent actin microfilaments promote PIN1 polarization by localized inhibition of clathrin-dependent endocytosis.
PLoS biology 2012;10(4):e1001299.
2011: Kirsten ten Tusscher; Ben Scheres
Joining forces: feedback and integration in plant development.
Current opinion in genetics & development 2011;21(6):799-805.
2011: Kalika Prasad; Smita Raman; G Venugopala Reddy; Gabino F Sanchez-Perez; Berend Snel; Miltos Tsiantis; Arie J Verkleij; Ram Kishor Yadav; Michalis Barkoulas; Ikram Blilou; Pankaj Dhonukshe; Carla Galinha; Stephen P Grigg; Hugo Hofhuis; Ari Pekka Mähönen; Wally H Muller; Violaine Pinon; Ben Scheres
Arabidopsis PLETHORA transcription factors control phyllotaxis.
Current biology : CB 2011;21(13):1123-8.
2011: Guy Wachsman; Renze Heidstra; Ben Scheres
Distinct cell-autonomous functions of RETINOBLASTOMA-RELATED in Arabidopsis stem cells revealed by the Brother of Brainbow clonal analysis system.
The Plant cell 2011;23(7):2581-91.
2011: Anthony Bishopp; Satu J Lehesranta; Anne Vatén; Hanna Help; Sedeer El-Showk; Ben Scheres; Kerttuli Helariutta; Ari Pekka Mähönen; Hitoshi Sakakibara; Ykä Helariutta
Phloem-transported cytokinin regulates polar auxin transport and maintains vascular pattern in the root meristem.
Current biology : CB 2011;21(11):927-32.
2011: Anthony Bishopp; Hanna Help; Sedeer El-Showk; Dolf Weijers; Ben Scheres; Jirí Friml; Eva Benková; Ari Pekka Mähönen; Ykä Helariutta
A mutually inhibitory interaction between auxin and cytokinin specifies vascular pattern in roots.
Current biology : CB 2011;21(11):917-26.
2011: Colette A ten Hove; Zoltán Bochdanovits; Vera M A Jansweijer; Fenne G Koning; Lidija Berke; Gabino F Sanchez-Perez; Ben Scheres; Renze Heidstra
Probing the roles of LRR RLK genes in Arabidopsis thaliana roots using a custom T-DNA insertion set.
Plant molecular biology 2011;76(1-2):69-83.
2011: Michal Mokry; Isaäc J Nijman; Ben Scheres; Anja van Dijken; Rene Benjamins; Renze Heidstra; Edwin Cuppen
Identification of factors required for meristem function in Arabidopsis using a novel next generation sequencing fast forward genetics approach.
BMC genomics 2011;12():256.
2010: Pankaj Dhonukshe; Fang Huang; Carlos S Galvan-Ampudia; Ari Pekka Mähönen; Jurgen Kleine-Vehn; Jian Xu; Ab Quint; Kalika Prasad; Jirí Friml; Ben Scheres; Remko Offringa
Plasma membrane-bound AGC3 kinases phosphorylate PIN auxin carriers at TPRXS(N/S) motifs to direct apical PIN recycling.
Development (Cambridge, England) 2010;137(19):3245-55.
2010: Hala Hassan; Ben Scheres; Ikram Blilou
JACKDAW controls epidermal patterning in the Arabidopsis root meristem through a non-cell-autonomous mechanism.
Development (Cambridge, England) 2010;137(9):1523-9.
2010: Colette A ten Hove; Viola Willemsen; Wouter J de Vries; Anja van Dijken; Ben Scheres; Renze Heidstra
SCHIZORIZA encodes a nuclear factor regulating asymmetry of stem cell divisions in the Arabidopsis root.
Current biology : CB 2010;20(5):452-7.
2010: Tom Bennett; Albert van den Toorn; Gabino F Sanchez-Perez; Ana Campilho; Viola Willemsen; Berend Snel; Ben Scheres
SOMBRERO, BEARSKIN1, and BEARSKIN2 regulate root cap maturation in Arabidopsis.
The Plant cell 2010;22(3):640-54.
2010: Tom Bennett; Ben Scheres
Root development-two meristems for the price of one?
Current topics in developmental biology 2010;91():67-102.
2009: Verônica A Grieneisen; Ben Scheres
Back to the future: evolution of computational models in plant morphogenesis.
Current opinion in plant biology 2009;12(5):606-14.
2009: Frank L H Menke; Ben Scheres
Plant asymmetric cell division, vive la différence!
Cell 2009;137(7):1189-92.
2009: Noortje Kornet; Ben Scheres
Members of the GCN5 histone acetyltransferase complex regulate PLETHORA-mediated root stem cell niche maintenance and transit amplifying cell proliferation in Arabidopsis.
The Plant cell 2009;21(4):1070-9.
2009: Alexis Thomann; Esther Lechner; Maureen Hansen; Eva Dumbliauskas; Yves Parmentier; Joe Kieber; Ben Scheres; Pascal Genschik
Arabidopsis CULLIN3 genes regulate primary root growth and patterning by ethylene-dependent and -independent mechanisms.
PLoS genetics 2009;5(1):e1000328.
2008: René Benjamins; Ben Scheres
Auxin: the looping star in plant development.
Annual review of plant biology 2008;59():443-65.
2008: José M Pérez-Pérez; Olivier Serralbo; Marleen Vanstraelen; Cristina González; Marie Claire Criqui; Pascal Genschik; Eva Kondorosi; Ben Scheres
Specialization of CDC27 function in the Arabidopsis thaliana anaphase-promoting complex (APC/C).
The Plant journal : for cell and molecular biology 2008;53(1):78-89.
2007: Ben Scheres; Volker Lipka
Plant cell biology--get your networks together.
Current opinion in plant biology 2007;10(6):546-8.
2007: Carla Galinha; Hugo Hofhuis; Marijn Luijten; Viola Willemsen; Ikram Blilou; Renze Heidstra; Ben Scheres
PLETHORA proteins as dose-dependent master regulators of Arabidopsis root development.
Nature 2007;449(7165):1053-7.
2007: Verônica A Grieneisen; Jian Xu; Athanasius F M Marée; Paulien Hogeweg; Ben Scheres
Auxin transport is sufficient to generate a maximum and gradient guiding root growth.
Nature 2007;449(7165):1008-13.
2007: David Welch; Hala Hassan; Ikram Blilou; Richard Immink; Renze Heidstra; Ben Scheres
Arabidopsis JACKDAW and MAGPIE zinc finger proteins delimit asymmetric cell division and stabilize tissue boundaries by restricting SHORT-ROOT action.
Genes & development 2007;21(17):2196-204.
2007: Ben Scheres
Stem-cell niches: nursery rhymes across kingdoms.
Nature reviews. Molecular cell biology 2007;8(5):345-54.
2007: Hongchang Cui; Mitchell P Levesque; Teva Vernoux; Jee W Jung; Alice J Paquette; Kimberly L Gallagher; Jean Y Wang; Ikram Blilou; Ben Scheres; Philip N Benfey
An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants.
Science (New York, N.Y.) 2007;316(5823):421-5.
2007: Ananda K Sarkar; Marijn Luijten; Shunsuke Miyashima; Michael Lenhard; Takashi Hashimoto; Keiji Nakajima; Ben Scheres; Renze Heidstra; Thomas Laux
Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers.
Nature 2007;446(7137):811-4.
2007: Ben Scheres
Plant biology: the force from without.
Nature 2007;446(7132):151-2.
2006: Urs Fischer; Yoshihisa Ikeda; Karin Ljung; Olivier Serralbo; Manoj Singh; Renze Heidstra; Klaus Palme; Ben Scheres; Markus Grebe
Vectorial information for Arabidopsis planar polarity is mediated by combined AUX1, EIN2, and GNOM activity.
Current biology : CB 2006;16(21):2143-9.
2006: Ana Campilho; Bernardo Garcia; Henk V D Toorn; Henk V Wijk; Aurélio Campilho; Ben Scheres
Time-lapse analysis of stem-cell divisions in the Arabidopsis thaliana root meristem.
The Plant journal : for cell and molecular biology 2006;48(4):619-27.
2006: Olivier Serralbo; José Manuel Pérez-Pérez; Renze Heidstra; Ben Scheres
Non-cell-autonomous rescue of anaphase-promoting complex function revealed by mosaic analysis of HOBBIT, an Arabidopsis CDC27 homolog.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(35):13250-5.
2006: Justyna Wisniewska; Jian Xu; Daniela Seifertová; Philip B Brewer; Kamil Ruzicka; Ikram Blilou; David Rouquié; Eva Benková; Ben Scheres; Jirí Friml
Polar PIN localization directs auxin flow in plants.
Science (New York, N.Y.) 2006;312(5775):883.
2006: Mitchell P Levesque; Teva Vernoux; Wolfgang Busch; Hongchang Cui; Jean Y Wang; Ikram Blilou; Hala Hassan; Keiji Nakajima; Noritaka Matsumoto; Jan U Lohmann; Ben Scheres; Philip N Benfey
Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis.
PLoS biology 2006;4(5):e143.
2006: Ben Scheres; Jian Xu
Polar auxin transport and patterning: grow with the flow.
Genes & development 2006;20(8):922-6.
2006: Jian Xu; Hugo Hofhuis; Renze Heidstra; Michael Sauer; Jirí Friml; Ben Scheres
A molecular framework for plant regeneration.
Science (New York, N.Y.) 2006;311(5759):385-8.
2006: Jan Hejátko; Ikram Blilou; Philip B Brewer; Jirí Friml; Ben Scheres; Eva Benková
In situ hybridization technique for mRNA detection in whole mount Arabidopsis samples.
Nature protocols 2006;1(4):1939-46.
2006: Jirí Friml; Philip N Benfey; Eva Benková; Malcolm Bennett; Thomas Berleth; Niko Geldner; Markus Grebe; Marcus G Heisler; Jan Hejátko; Gerd Jürgens; Thomas Laux; Keith Lindsey; Wolfgang Lukowitz; Christian Luschnig; Rienk Offringa; Ben Scheres; Ranjan Swarup; Ramón Torres-Ruiz; Dolf Weijers; Eva Zazímalová
Apical-basal polarity: why plant cells don't stand on their heads.
Trends in plant science 2006;11(1):12-4.
2005: Marjolein Wildwater; Ana Campilho; Jose Manuel Perez-Perez; Renze Heidstra; Ikram Blilou; Henrie Korthout; Jayanta Chatterjee; Luisa Mariconti; Wilhelm Gruissem; Ben Scheres
The RETINOBLASTOMA-RELATED gene regulates stem cell maintenance in Arabidopsis roots.
Cell 2005;123(7):1337-49.
2005: Jian Xu; Ben Scheres
Cell polarity: ROPing the ends together.
Current opinion in plant biology 2005;8(6):613-8.
2005: Ben Scheres
Stem cells: a plant biology perspective.
Cell 2005;122(4):499-504.
2005: Jian Xu; Ben Scheres
Dissection of Arabidopsis ADP-RIBOSYLATION FACTOR 1 function in epidermal cell polarity.
The Plant cell 2005;17(2):525-36.
2005: Ikram Blilou; Jian Xu; Marjolein Wildwater; Viola Willemsen; Ivan Paponov; Jirí Friml; Renze Heidstra; Mitsuhiro Aida; Klaus Palme; Ben Scheres
The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots.
Nature 2005;433(7021):39-44.
2004: Mitsuhiro Aida; Dimitris Beis; Renze Heidstra; Viola Willemsen; Ikram Blilou; Carla Galinha; Laurent Nussaume; Yoo-Sun Noh; Richard M Amasino; Ben Scheres
The PLETHORA genes mediate patterning of the Arabidopsis root stem cell niche.
Cell 2004;119(1):109-20.
2004: Renze Heidstra; David Welch; Ben Scheres
Mosaic analyses using marked activation and deletion clones dissect Arabidopsis SCARECROW action in asymmetric cell division.
Genes & development 2004;18(16):1964-9.
2004: Viola Willemsen; Ben Scheres
Mechanisms of pattern formation in plant embryogenesis.
Annual review of genetics 2004;38():587-614.
2004: Ben Scheres; Henk van den Toorn; Renze Heidstra
Root genomics: towards digital in situ hybridization.
Genome biology 2004;5(6):227.
2003: Arnaud Capron; Olivier Serralbo; Katalin Fülöp; Florian Frugier; Yves Parmentier; Aiwu Dong; Alain Lecureuil; Philippe Guerche; Eva Kondorosi; Ben Scheres; Pascal Genschik
The Arabidopsis anaphase-promoting complex or cyclosome: molecular and genetic characterization of the APC2 subunit.
The Plant cell 2003;15(10):2370-82.
2003: Eva Casamitjana-Martínez; Hugo Hofhuis; Jian Xu; Chun-Ming Liu; Renze Heidstra; Ben Scheres
Root-specific CLE19 overexpression and the sol1/2 suppressors implicate a CLV-like pathway in the control of Arabidopsis root meristem maintenance.
Current biology : CB 2003;13(16):1435-41.
2003: Markus Grebe; Jian Xu; Wiebke Möbius; Takashi Ueda; Akihiko Nakano; Hans J Geuze; Martin B Rook; Ben Scheres
Arabidopsis sterol endocytosis involves actin-mediated trafficking via ARA6-positive early endosomes.
Current biology : CB 2003;13(16):1378-87.
2003: Viola Willemsen; Jirí Friml; Markus Grebe; Albert van den Toorn; Klaus Palme; Ben Scheres
Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1 function.
The Plant cell 2003;15(3):612-25.
2003: Sabrina Sabatini; Renze Heidstra; Marjolein Wildwater; Ben Scheres
SCARECROW is involved in positioning the stem cell niche in the Arabidopsis root meristem.
Genes & development 2003;17(3):354-8.
2002: Ben Scheres
Plant patterning: TRY to inhibit your neighbors.
Current biology : CB 2002;12(23):R804-6.
2002: Ikram Blilou; Florian Frugier; Saskia Folmer; Olivier Serralbo; Viola Willemsen; Harald Wolkenfelt; Núbia B Eloy; P C G Ferreira; Peter J Weisbeek; Ben Scheres
The Arabidopsis HOBBIT gene encodes a CDC27 homolog that links the plant cell cycle to progression of cell differentiation.
Genes & development 2002;16(19):2566-75.
2002: Jirí Friml; Eva Benková; Ikram Blilou; Justyna Wisniewska; Thorsten Hamann; Karin Ljung; Scott Woody; Göran Sandberg; Ben Scheres; Gerd Jürgens; Klaus Palme
AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis.
Cell 2002;108(5):661-73.
2002: Markus Grebe; Jirí Friml; Ranjan Swarup; Karin Ljung; Göran Sandberg; Maarten Terlou; Klaus Palme; Malcolm J Bennett; Ben Scheres
Cell polarity signaling in Arabidopsis involves a BFA-sensitive auxin influx pathway.
Current biology : CB 2002;12(4):329-34.
2001: Markus Grebe; Jian Xu; Ben Scheres
Cell axiality and polarity in plants--adding pieces to the puzzle.
Current opinion in plant biology 2001;4(6):520-6.
2001: Ben Scheres
Plant cell identity. The role of position and lineage.
Plant physiology 2001;125(1):112-4.
2000: Philip N Benfey; Ben Scheres
Root development.
Current biology : CB 2000;10(22):R813-5.
2000: Ben Scheres
Non-linear signaling for pattern formation?
Current opinion in plant biology 2000;3(5):412-7.
1999: Sabrina Sabatini; D Beis; Harald Wolkenfelt; Jane Murfett; Tom J Guilfoyle; J Malamy; Philip N Benfey; O Leyser; N Bechtold; Peter J Weisbeek; Ben Scheres
An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis root.
Cell 1999;99(5):463-72.
1999: Ben Scheres
Plant development and signalling. Introduction.
Seminars in cell & developmental biology 1999;10(2):117-9.
1999: Ben Scheres; Renze Heidstra
Digging out roots: pattern formation, cell division, and morphogenesis in plants.
Current topics in developmental biology 1999;45():207-47.
1998: C van den Berg; Peter J Weisbeek; Ben Scheres
Cell fate and cell differentiation status in the Arabidopsis root.
Planta 1998;205(4):483-91.
1998: Ben Scheres; Thomas Berleth
Root development: new meanings for root canals?
Current opinion in plant biology 1998;1(1):32-6.
1998: Viola Willemsen; Harald Wolkenfelt; G de Vrieze; Peter J Weisbeek; Ben Scheres
The HOBBIT gene is required for formation of the root meristem in the Arabidopsis embryo.
Development (Cambridge, England) 1998;125(3):521-31.
1997: C van den Berg; Viola Willemsen; Giel Hendriks; Peter J Weisbeek; Ben Scheres
Short-range control of cell differentiation in the Arabidopsis root meristem.
Nature 1997;390(6657):287-9.
1997: Ben Scheres
Cell signaling in root development.
Current opinion in genetics & development 1997;7(4):501-6.
1995: C van den Berg; Viola Willemsen; WJ Hage; Peter J Weisbeek; Ben Scheres
Cell fate in the Arabidopsis root meristem determined by directional signalling.
Nature 1995;378(6552):62-5.
1993: Liam Dolan; K Janmaat; Viola Willemsen; Paul Linstead; S Poethig; Keith Roberts; Ben Scheres
Cellular organisation of the Arabidopsis thaliana root.
Development (Cambridge, England) 1993;119(1):71-84.