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Eric Selker

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Publications

TOP 3
Kirsty Jamieson; Zachary A. Lewis; Michael R Rountree; Jason E Stajich; Eric U Selker
Regional control of histone H3 lysine 27 methylation in Neurospora.
Xiaodong Qi; Eric U Selker; Peter F Stadler; Steve Hoffmann; Shinji Honda; Yang Li; Manja Marz; Axel Mosig; Joshua D Podlevsky; Julian J-L Chen
The common ancestral core of vertebrate and fungal telomerase RNAs.
Shinji Honda; Zachary A Lewis; Ragna Sack; Wolfgang Fischle; Kenji Shimada; Eric U Selker
Heterochromatin protein 1 forms distinct complexes to direct histone deacetylation and DNA methylation.

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All Publications

2013: Kirsty Jamieson; Zachary A. Lewis; Michael R Rountree; Jason E Stajich; Eric U Selker
Regional control of histone H3 lysine 27 methylation in Neurospora.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(15):6027-32.
2013: Xiaodong Qi; Eric U Selker; Peter F Stadler; Steve Hoffmann; Shinji Honda; Yang Li; Manja Marz; Axel Mosig; Joshua D Podlevsky; Julian J-L Chen
The common ancestral core of vertebrate and fungal telomerase RNAs.
Nucleic acids research 2013;41(1):450-62.
2012: Shinji Honda; Zachary A Lewis; Ragna Sack; Wolfgang Fischle; Kenji Shimada; Eric U Selker
Heterochromatin protein 1 forms distinct complexes to direct histone deacetylation and DNA methylation.
Nature structural & molecular biology 2012;19(5):471-7, S1.
2011: William J Belden; Zachary A. Lewis; Jennifer J Loros; Eric U Selker; Jay C Dunlap
CHD1 remodels chromatin and influences transient DNA methylation at the clock gene frequency.
PLoS genetics 2011;7(7):e1002166.
2011: Eric U Selker
Neurospora.
Current biology : CB 2011;21(4):R139-40.
2010: Kristina M Smith; Joseph R Dobosy; Jennifer E Reifsnyder; Michael R Rountree; D C Anderson; George R Green; Eric U Selker
H2B- and H3-specific histone deacetylases are required for DNA methylation in Neurospora crassa.
Genetics 2010;186(4):1207-16.
2010: Zachary A. Lewis; Keyur K Adhvaryu; Shinji Honda; Anthony L Shiver; Marijn Knip; Ragna Sack; Eric U Selker
DNA methylation and normal chromosome behavior in Neurospora depend on five components of a histone methyltransferase complex, DCDC.
PLoS genetics 2010;6(11):e1001196.
2010: D C Anderson; George Ray Green; Kristina Smith; Eric U Selker
Extensive and varied modifications in histone H2B of wild-type and histone deacetylase 1 mutant Neurospora crassa.
Biochemistry 2010;49(25):5244-57.
2010: Lei Xiong; Keyur K Adhvaryu; Eric U Selker; Yinsheng Wang
Mapping of lysine methylation and acetylation in core histones of Neurospora crassa.
Biochemistry 2010;49(25):5236-43.
2010: Heng-Chi Lee; Liande Li; Weifeng Gu; Zhihong Xue; Susan K Crosthwaite; Alexander Pertsemlidis; Zachary A Lewis; Michael Freitag; Eric U Selker; Craig C Mello; Yi Liu
Diverse pathways generate microRNA-like RNAs and Dicer-independent small interfering RNAs in fungi.
Molecular cell 2010;38(6):803-14.
2010: Zachary A. Lewis; Keyur K Adhvaryu; Shinji Honda; Anthony L Shiver; Eric U Selker
Identification of DIM-7, a protein required to target the DIM-5 H3 methyltransferase to chromatin.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(18):8310-5.
2010: Gregory O Kothe; Maki Kitamura; Mitsuko Masutani; Eric U Selker; Hirokazu Inoue
PARP is involved in replicative aging in Neurospora crassa.
Fungal genetics and biology : FG & B 2010;47(4):297-309.
2010: Shinji Honda; Zachary A Lewis; Maite Huarte; Lucy Y Cho; Larry L David; Yang Shi; Eric U Selker
The DMM complex prevents spreading of DNA methylation from transposons to nearby genes in Neurospora crassa.
Genes & development 2010;24(5):443-54.
2009: Shinji Honda; Eric U Selker
Tools for fungal proteomics: multifunctional neurospora vectors for gene replacement, protein expression and protein purification.
Genetics 2009;182(1):11-23.
2009: Cheng Wu; Yun-Sik Kim; Kristina Smith; Weixi Li; Heather M Hood; Chuck Staben; Eric U Selker; Matthew S Sachs; Mark L Farman
Characterization of chromosome ends in the filamentous fungus Neurospora crassa.
Genetics 2009;181(3):1129-45.
2009: Zachary A. Lewis; Shinji Honda; Tamir K Khlafallah; Jennifer K Jeffress; Michael Freitag; Fabio Mohn; Dirk Schübeler; Eric U Selker
Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa.
Genome research 2009;19(3):427-37.
2008: Keyur K Adhvaryu; Eric U Selker
Protein phosphatase PP1 is required for normal DNA methylation in Neurospora.
Genes & development 2008;22(24):3391-6.
2008: Shinji Honda; Eric U Selker
Direct interaction between DNA methyltransferase DIM-2 and HP1 is required for DNA methylation in Neurospora crassa.
Molecular and cellular biology 2008;28(19):6044-55.
2008: Eric U Selker
Robert L. Metzenberg, June 11, 1930-July 15, 2007: geneticist extraordinaire and "model human".
Genetics 2008;178(2):611-9.
2008: Kristina Smith; Gregory O Kothe; Cindy B Matsen; Tamir K Khlafallah; Keyur K Adhvaryu; Melissa Hemphill; Michael Freitag; Mohammad R Motamedi; Eric U Selker
The fungus Neurospora crassa displays telomeric silencing mediated by multiple sirtuins and by methylation of histone H3 lysine 9.
Epigenetics & chromatin 2008;1(1):5.
2008: Nathan A Baird; Paul D Etter; Tressa S Atwood; Mark C Currey; Anthony L Shiver; Zachary A. Lewis; Eric U Selker; William A Cresko; Eric A Johnson
Rapid SNP discovery and genetic mapping using sequenced RAD markers.
PloS one 2008;3(10):e3376.
2008: Dong W Lee; Michael Freitag; Eric U Selker; Rodolfo Aramayo
A cytosine methyltransferase homologue is essential for sexual development in Aspergillus nidulans.
PloS one 2008;3(6):e2531.
2007: Zachary A. Lewis; Anthony L Shiver; Nicholas Stiffler; Michael R Miller; Eric A Johnson; Eric U Selker
High-density detection of restriction-site-associated DNA markers for rapid mapping of mutated loci in Neurospora.
Genetics 2007;177(2):1163-71.
2007: David D Perkins; Michael Freitag; Virginia C Pollard; Lori A Bailey-Shrode; Eric U Selker; Daniel J Ebbole
Recurrent locus-specific mutation resulting from a cryptic ectopic insertion in Neurospora.
Genetics 2007;175(2):527-44.
2006: Benedetto Grimaldi; Pierluca Coiro; patrizia filetici; Emanuela Berge; Joseph R Dobosy; Michael Freitag; Eric U Selker; Paola Ballario
The Neurospora crassa White Collar-1 dependent blue light response requires acetylation of histone H3 lysine 14 by NGF-1.
Molecular biology of the cell 2006;17(10):4576-83.
2005: Keyur K Adhvaryu; Stephanie A Morris; Brian D Strahl; Eric U Selker
Methylation of histone H3 lysine 36 is required for normal development in Neurospora crassa.
Eukaryotic cell 2005;4(8):1455-64.
2005: Michael Freitag; Eric U Selker
Controlling DNA methylation: many roads to one modification.
Current opinion in genetics & development 2005;15(2):191-9.
2005: Robert E Collins; Makoto Tachibana; Hisashi Tamaru; Kristina Smith; Da Jia; Xing Zhang; Eric U Selker; Yoichi Shinkai; Xiaodong Cheng
In vitro and in vivo analyses of a Phe/Tyr switch controlling product specificity of histone lysine methyltransferases.
The Journal of biological chemistry 2005;280(7):5563-70.
2005: Eric U Selker; Rowland H Davis; David D Perkins
The 2005 Thomas Hunt Morgan Medal. Robert L. Metzenberg.
Genetics 2005;169(2):503-5.
2004: Michael Freitag; Patrick C Hickey; Namboori B Raju; Eric U Selker; Nick D Read
GFP as a tool to analyze the organization, dynamics and function of nuclei and microtubules in Neurospora crassa.
Fungal genetics and biology : FG & B 2004;41(10):897-910.
2004: James E Galagan; Eric U Selker
RIP: the evolutionary cost of genome defense.
Trends in genetics : TIG 2004;20(9):417-23.
2004: Michael Freitag; Dong W Lee; Gregory O Kothe; Robert J Pratt; Rodolfo Aramayo; Eric U Selker
DNA methylation is independent of RNA interference in Neurospora.
Science (New York, N.Y.) 2004;304(5679):1939.
2004: Michael Freitag; Patrick C Hickey; Tamir K Khlafallah; Nick D Read; Eric U Selker
HP1 is essential for DNA methylation in neurospora.
Molecular cell 2004;13(3):427-34.
2004: Eric U Selker
Genome defense and DNA methylation in Neurospora.
Cold Spring Harbor symposia on quantitative biology 2004;69():119-24.
2003: Xing Zhang; Zhe Yang; Seema I Khan; John Horton; Hisashi Tamaru; Eric U Selker; Xiaodong Cheng
Structural basis for the product specificity of histone lysine methyltransferases.
Molecular cell 2003;12(1):177-85.
2003: Eric U Selker
Molecular biology. A self-help guide for a trim genome.
Science (New York, N.Y.) 2003;300(5625):1517-8.
2003: Hisashi Tamaru; Xing Zhang; Debra McMillen; Prim B Singh; Jun-ichi Nakayama; Shiv I S Grewal; C David Allis; Xiaodong Cheng; Eric U Selker
Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa.
Nature genetics 2003;34(1):75-9.
2003: Eric U Selker; Nikolaos A Tountas; Sally H Cross; Brian S Margolin; Jonathan Murphy; Adrian P Bird; Michael Freitag
The methylated component of the Neurospora crassa genome.
Nature 2003;422(6934):893-7.
2003: Hernán Diego Folco; Michael Freitag; Ana Ramón; Esteban D Temporini; María E Alvarez; Irene García; Claudio Scazzocchio; Eric U Selker; Alberto L Rosa
Histone H1 Is required for proper regulation of pyruvate decarboxylase gene expression in Neurospora crassa.
Eukaryotic cell 2003;2(2):341-50.
2003: Hisashi Tamaru; Eric U Selker
Synthesis of signals for de novo DNA methylation in Neurospora crassa.
Molecular and cellular biology 2003;23(7):2379-94.
2003: Jonathan C Cheng; Cindy B Matsen; Felicidad A Gonzales; Wei Ye; Sheldon Greer; Victor E Marquez; Peter A Jones; Eric U Selker
Inhibition of DNA methylation and reactivation of silenced genes by zebularine.
Journal of the National Cancer Institute 2003;95(5):399-409.
2002: Eric U Selker; Michael Freitag; Gregory O Kothe; Brian S Margolin; Michael R Rountree; C David Allis; Hisashi Tamaru
Induction and maintenance of nonsymmetrical DNA methylation in Neurospora.
Proceedings of the National Academy of Sciences of the United States of America 2002;99 Suppl 4():16485-90.
2002: Xing Zhang; Hisashi Tamaru; Seema I Khan; John Horton; Lisa J Keefe; Eric U Selker; Xiaodong Cheng
Structure of the Neurospora SET domain protein DIM-5, a histone H3 lysine methyltransferase.
Cell 2002;111(1):117-27.
2002: Michael Freitag; Rebecca L Williams; Gregory O Kothe; Eric U Selker
A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(13):8802-7.
2002: Shan M Hays; Johanna Swanson; Eric U Selker
Identification and characterization of the genes encoding the core histones and histone variants of Neurospora crassa.
Genetics 2002;160(3):961-73.
2002: Eric U Selker
Repeat-induced gene silencing in fungi.
Advances in genetics 2002;46():439-50.
2001: Hisashi Tamaru; Eric U Selker
A histone H3 methyltransferase controls DNA methylation in Neurospora crassa.
Nature 2001;414(6861):277-83.
2001: E Kouzminova; Eric U Selker
dim-2 encodes a DNA methyltransferase responsible for all known cytosine methylation in Neurospora.
The EMBO journal 2001;20(15):4309-23.
2001: Joseph R Dobosy; Eric U Selker
Emerging connections between DNA methylation and histone acetylation.
Cellular and molecular life sciences : CMLS 2001;58(5-6):721-7.
2000: V P Miao; Michael Freitag; Eric U Selker
Short TpA-rich segments of the zeta-eta region induce DNA methylation in Neurospora crassa.
Journal of molecular biology 2000;300(2):249-73.
1999: M K Watters; T A Randall; Brian S Margolin; Eric U Selker; D R Stadler
Action of repeat-induced point mutation on both strands of a duplex and on tandem duplications of various sizes in Neurospora.
Genetics 1999;153(2):705-14.
1999: Eric U Selker
Gene silencing: repeats that count.
Cell 1999;97(2):157-60.
1998: Eric U Selker
Trichostatin A causes selective loss of DNA methylation in Neurospora.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(16):9430-5.
1998: Brian S Margolin; P W Garrett-Engele; J N Stevens; D Y Fritz; C Garrett-Engele; R L Metzenberg; Eric U Selker
A methylated Neurospora 5S rRNA pseudogene contains a transposable element inactivated by repeat-induced point mutation.
Genetics 1998;149(4):1787-97.
1998: H M Foss; C J Roberts; Eric U Selker
Mutations in the dim-1 gene of Neurospora crassa reduce the level of DNA methylation.
Molecular & general genetics : MGG 1998;259(1):60-71.
1997: M R Rountree; Eric U Selker
DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa.
Genes & development 1997;11(18):2383-95.
1997: David D Perkins; Brian S Margolin; Eric U Selker; S D Haedo
Occurrence of repeat induced point mutation in long segmental duplications of Neurospora.
Genetics 1997;147(1):125-36.
1997: Eric U Selker
Epigenetic phenomena in filamentous fungi: useful paradigms or repeat-induced confusion?
Trends in genetics : TIG 1997;13(8):296-301.
1997: Matthew S Sachs; Eric U Selker; B Lin; C J Roberts; Z Luo; D Vaught-Alexander; Brian S Margolin
Expression of herpes virus thymidine kinase in Neurospora crassa.
Nucleic acids research 1997;25(12):2389-95.
1997: J T Irelan; Eric U Selker
Cytosine methylation associated with repeat-induced point mutation causes epigenetic gene silencing in Neurospora crassa.
Genetics 1997;146(2):509-23.
1996: Carlo Cogoni; J T Irelan; M Schumacher; T J Schmidhauser; Eric U Selker; Giuseppe Macino
Transgene silencing of the al-1 gene in vegetative cells of Neurospora is mediated by a cytoplasmic effector and does not depend on DNA-DNA interactions or DNA methylation.
The EMBO journal 1996;15(12):3153-63.
1996: E B Cambareri; H M Foss; M R Rountree; Eric U Selker; J A Kinsey
Epigenetic control of a transposon-inactivated gene in Neurospora is dependent on DNA methylation.
Genetics 1996;143(1):137-46.
1995: C J Roberts; Eric U Selker
Mutations affecting the biosynthesis of S-adenosylmethionine cause reduction of DNA methylation in Neurospora crassa.
Nucleic acids research 1995;23(23):4818-26.
1995: M J Singer; B A Marcotte; Eric U Selker
DNA methylation associated with repeat-induced point mutation in Neurospora crassa.
Molecular and cellular biology 1995;15(10):5586-97.
1995: V P Miao; M R Rountree; Eric U Selker
Ectopic integration of transforming DNA is rare among neurospora transformants selected for gene replacement.
Genetics 1995;139(4):1533-44.
1995: H M Foss; C J Roberts; K M Claeys; Eric U Selker
Abnormal chromosome behavior in Neurospora mutants defective in DNA methylation.
Science (New York, N.Y.) 1995;267(5196):316.
1995: M J Singer; Eric U Selker
Genetic and epigenetic inactivation of repetitive sequences in Neurospora crassa: RIP, DNA methylation, and quelling.
Current topics in microbiology and immunology 1995;197():165-77.
1994: J T Irelan; A T Hagemann; Eric U Selker
High frequency repeat-induced point mutation (RIP) is not associated with efficient recombination in Neurospora.
Genetics 1994;138(4):1093-103.
1994: V P Miao; M J Singer; M R Rountree; Eric U Selker
A targeted-replacement system for identification of signals for de novo methylation in Neurospora crassa.
Molecular and cellular biology 1994;14(11):7059-67.
1994: J A Kinsey; P W Garrett-Engele; E B Cambareri; Eric U Selker
The Neurospora transposon Tad is sensitive to repeat-induced point mutation (RIP).
Genetics 1994;138(3):657-64.
1993: Eric U Selker; D Y Fritz; M J Singer
Dense nonsymmetrical DNA methylation resulting from repeat-induced point mutation in Neurospora.
Science (New York, N.Y.) 1993;262(5140):1724-8.
1993: H M Foss; C J Roberts; K M Claeys; Eric U Selker
Abnormal chromosome behavior in Neurospora mutants defective in DNA methylation.
Science (New York, N.Y.) 1993;262(5140):1737-41.
1993: Eric U Selker
Control of DNA methylation in fungi.
EXS 1993;64():212-7.
1993: Eric U Selker; G A Richardson; P W Garrett-Engele; M J Singer; V Miao
Dissection of the signal for DNA methylation in the zeta-eta region of Neurospora.
Cold Spring Harbor symposia on quantitative biology 1993;58():323-9.
1991: H M Foss; Eric U Selker
Efficient DNA pairing in a Neurospora mutant defective in chromosome pairing.
Molecular & general genetics : MGG 1991;231(1):49-52.
1991: E J Foss; P W Garrett; J A Kinsey; Eric U Selker
Specificity of repeat-induced point mutation (RIP) in Neurospora: sensitivity of non-Neurospora sequences, a natural diverged tandem duplication, and unique DNA adjacent to a duplicated region.
Genetics 1991;127(4):711-7.
1991: E B Cambareri; M J Singer; Eric U Selker
Recurrence of repeat-induced point mutation (RIP) in Neurospora crassa.
Genetics 1991;127(4):699-710.
1990: Eric U Selker
DNA methylation and chromatin structure: a view from below.
Trends in biochemical sciences 1990;15(3):103-7.
1990: Eric U Selker
Premeiotic instability of repeated sequences in Neurospora crassa.
Annual review of genetics 1990;24():579-613.
1989: W S Grayburn; Eric U Selker
A natural case of RIP: degeneration of the DNA sequence in an ancestral tandem duplication.
Molecular and cellular biology 1989;9(10):4416-21.
1989: E B Cambareri; B C Jensen; E Schabtach; Eric U Selker
Repeat-induced G-C to A-T mutations in Neurospora.
Science (New York, N.Y.) 1989;244(4912):1571-5.
1988: Eric U Selker; E B Cambareri; P W Garrett; K R Haack; B C Jensen; E Schabtach
DNA methylation and control of genome organization in Neurospora crassa.
Gene 1988;74(1):109-11.
1988: Eric U Selker; P W Garrett
DNA sequence duplications trigger gene inactivation in Neurospora crassa.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(18):6870-4.
1987: Eric U Selker; E B Cambareri; B C Jensen; K R Haack
Rearrangement of duplicated DNA in specialized cells of Neurospora.
Cell 1987;51(5):741-52.
1987: Eric U Selker; B C Jensen; G A Richardson
A portable signal causing faithful DNA methylation de novo in Neurospora crassa.
Science (New York, N.Y.) 1987;238(4823):48-53.
1987: Eric U Selker; J N Stevens
Signal for DNA methylation associated with tandem duplication in Neurospora crassa.
Molecular and cellular biology 1987;7(3):1032-8.
1986: David D Perkins; R L Metzenberg; N B Raju; Eric U Selker; E G Barry
Reversal of a Neurospora translocation by crossing over involving displaced rDNA, and methylation of the rDNA segments that result from recombination.
Genetics 1986;114(3):791-817.
1986: Eric U Selker; E Morzycka-Wroblewska; J N Stevens; R L Metzenberg
An upstream signal is required for in vitro transcription of Neurospora 5S RNA genes.
Molecular & general genetics : MGG 1986;205(1):189-92.
1985: Eric U Selker; J N Stevens
DNA methylation at asymmetric sites is associated with numerous transition mutations.
Proceedings of the National Academy of Sciences of the United States of America 1985;82(23):8114-8.
1985: R L Metzenberg; J N Stevens; Eric U Selker; E Morzycka-Wroblewska
Identification and chromosomal distribution of 5S rRNA genes in Neurospora crassa.
Proceedings of the National Academy of Sciences of the United States of America 1985;82(7):2067-71.
1985: Eric U Selker; J N Stevens; R L Metzenberg
Heterogeneity of 5S RNA in fungal ribosomes.
Science (New York, N.Y.) 1985;227(4692):1340-3.
1985: E Morzycka-Wroblewska; Eric U Selker; J N Stevens; R L Metzenberg
Concerted evolution of dispersed Neurospora crassa 5S RNA genes: pattern of sequence conservation between allelic and nonallelic genes.
Molecular and cellular biology 1985;5(1):46-51.
1981: Eric U Selker; S J Free; R L Metzenberg; C Yanofsky
An isolated pseudogene related to the 5S RNA genes in Neurospora crassa.
Nature 1981;294(5841):576-8.
1981: Eric U Selker; C Yanofsky; K Driftmier; R L Metzenberg; B Alzner-DeWeerd; U L RajBhandary
Dispersed 5S RNA genes in N. crassa: structure, expression and evolution.
Cell 1981;24(3):819-28.