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Weiyang Shi

Research Profile

Anatomy

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Genomics

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Publications

TOP 3
David Hendrix; Michael Levine; Weiyang Shi
miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data.
Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
Isolation of individual cells and tissues from electroporated sea squirt (Ciona) embryos by fluorescence-activated cell sorting (FACS).
Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
Whole-mount in situ hybridization on sea squirt (Ciona intestinalis) embryos.

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All Publications

2010: David Hendrix; Michael Levine; Weiyang Shi
miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data.
Genome biology 2010;11(4):R39.
2009: Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
Isolation of individual cells and tissues from electroporated sea squirt (Ciona) embryos by fluorescence-activated cell sorting (FACS).
Cold Spring Harbor protocols 2009;2009(12):pdb.prot5349.
2009: Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
Whole-mount in situ hybridization on sea squirt (Ciona intestinalis) embryos.
Cold Spring Harbor protocols 2009;2009(12):pdb.prot5348.
2009: Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
Microinjection of morpholino oligos and RNAs in sea squirt (Ciona) embryos.
Cold Spring Harbor protocols 2009;2009(12):pdb.prot5347.
2009: Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
X-gal staining of electroporated sea squirt (Ciona) embryos.
Cold Spring Harbor protocols 2009;2009(12):pdb.prot5346.
2009: Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
Electroporation of transgenic DNAs in the sea squirt Ciona.
Cold Spring Harbor protocols 2009;2009(12):pdb.prot5345.
2009: Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
Isolation of sea squirt (Ciona) gametes, fertilization, dechorionation, and development.
Cold Spring Harbor protocols 2009;2009(12):pdb.prot5344.
2009: Lionel Christiaen; Eileen Wagner; Weiyang Shi; Michael Levine
The sea squirt Ciona intestinalis.
Cold Spring Harbor protocols 2009;2009(12):pdb.emo138.
2009: Weiyang Shi; David Hendrix; Mike Levine; Benjamin J. Haley
A distinct class of small RNAs arises from pre-miRNA-proximal regions in a simple chordate.
Nature structural & molecular biology 2009;16(2):183-9.
2009: Weiyang Shi; Sara M Peyrot; Edwin Munro; Michael Levine
FGF3 in the floor plate directs notochord convergent extension in the Ciona tadpole.
Development (Cambridge, England) 2009;136(1):23-8.
2008: Weiyang Shi; Mike Levine
Ephrin signaling establishes asymmetric cell fates in an endomesoderm lineage of the Ciona embryo.
Development (Cambridge, England) 2008;135(5):931-40.
2007: Jeni Beh; Weiyang Shi; Mike Levine; Brad Davidson; Lionel Christiaen
FoxF is essential for FGF-induced migration of heart progenitor cells in the ascidian Ciona intestinalis.
Development (Cambridge, England) 2007;134(18):3297-305.
2006: Brad Davidson; Weiyang Shi; Jeni Beh; Lionel Christiaen; Mike Levine
FGF signaling delineates the cardiac progenitor field in the simple chordate, Ciona intestinalis.
Genes & development 2006;20(19):2728-38.
2005: Weiyang Shi; Michael Levine; Brad Davidson
Unraveling genomic regulatory networks in the simple chordate, Ciona intestinalis.
Genome research 2005;15(12):1668-74.
2005: Brad Davidson; Weiyang Shi; Michael Levine
Uncoupling heart cell specification and migration in the simple chordate Ciona intestinalis.
Development (Cambridge, England) 2005;132(21):4811-8.