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Ko Shimamoto

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Co-Publications
Name
13
Kawasaki, Tsutomu
9
Izawa, Takeshi
8
Yokoi, Shuji
8
Wong, Hann Ling
6
Umemura, Kenji
5
Isshiki, Masayuki
5
Kyozuka, Junko
5
Miki, Daisuke
5
Tamaki, Shojiro
4
Nakajima, M
3
Oikawa, Tetsuo
3
Morino, Kazuko
3
Satoh, H
2
Olsen, Odd-Arne
1
Peacock, James

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Publications

TOP 3
Komiya Reina; Yokoi Shuji; Shimamoto Ko
A gene network for long-day flowering activates RFT1 encoding a mobile flowering signal in rice.
Ishikawa Ryo; Shinomura Tomoko; Takano Makoto; Shimamoto Ko
Phytochrome dependent quantitative control of Hd3a transcription is the basis of the night break effect in rice flowering.
Takahashi Yasuyuki; Teshima Kosuke M; Yokoi Shuji; Innan Hideki; Shimamoto Ko
Variations in Hd1 proteins, Hd3a promoters, and Ehd1 expression levels contribute to diversity of flowering time in cultivated rice.

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All Publications

2009: Komiya Reina; Yokoi Shuji; Shimamoto Ko
A gene network for long-day flowering activates RFT1 encoding a mobile flowering signal in rice.
Development (Cambridge, England) 2009;136(20):3443-50.
2009: Ishikawa Ryo; Shinomura Tomoko; Takano Makoto; Shimamoto Ko
Phytochrome dependent quantitative control of Hd3a transcription is the basis of the night break effect in rice flowering.
Genes & genetic systems 2009;84(2):179-84.
2009: Takahashi Yasuyuki; Teshima Kosuke M; Yokoi Shuji; Innan Hideki; Shimamoto Ko
Variations in Hd1 proteins, Hd3a promoters, and Ehd1 expression levels contribute to diversity of flowering time in cultivated rice.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(11):4555-60.
2009: Purwestri Yekti Asih; Ogaki Yuka; Tamaki Shojiro; Tsuji Hiroyuki; Shimamoto Ko
The 14-3-3 protein GF14c acts as a negative regulator of flowering in rice by interacting with the florigen Hd3a.
Plant & cell physiology 2009;50(3):429-38.
2009: Wong Hann Ling; Shimamoto Ko
Sending ROS on a bullet train.
Science signaling 2009;2(90):pe60.
2008: Miki Daisuke; Shimamoto Ko
De novo DNA methylation induced by siRNA targeted to endogenous transcribed sequences is gene-specific and OsMet1-independent in rice.
The Plant journal : for cell and molecular biology 2008;56(4):539-49.
2008: Nakashima Ayako; Chen Letian; Thao Nguyen Phuong; Fujiwara Masayuki; Wong Hann Ling; Kuwano Masayoshi; Umemura Kenji; Shirasu Ken; Kawasaki Tsutomu; Shimamoto Ko
RACK1 functions in rice innate immunity by interacting with the Rac1 immune complex.
The Plant cell 2008;20(8):2265-79.
2008: Abe Makoto; Fujiwara Masayuki; Kurotani Ken-Ichi; Yokoi Shuji; Shimamoto Ko
Identification of dynamin as an interactor of rice GIGANTEA by tandem affinity purification (TAP).
Plant & cell physiology 2008;49(3):420-32.
2008: Komiya Reina; Ikegami Akiko; Tamaki Shojiro; Yokoi Shuji; Shimamoto Ko
Hd3a and RFT1 are essential for flowering in rice.
Development (Cambridge, England) 2008;135(4):767-74.
2008: Okano Yosuke; Miki Daisuke; Shimamoto Ko
Small interfering RNA (siRNA) targeting of endogenous promoters induces DNA methylation, but not necessarily gene silencing, in rice.
The Plant journal : for cell and molecular biology 2008;53(1):65-77.
2007: Thao Nguyen Phuong; Chen Letian; Nakashima Ayako; Hara Shin-ichiro; Umemura Kenji; Takahashi Akira; Shirasu Ken; Kawasaki Tsutomu; Shimamoto Ko
RAR1 and HSP90 form a complex with Rac/Rop GTPase and function in innate-immune responses in rice.
The Plant cell 2007;19(12):4035-45.
2007: Wong Hann Ling; Pinontoan Reinhard; Hayashi Kokoro; Tabata Ryo; Yaeno Takashi; Hasegawa Kana; Kojima Chojiro; Yoshioka Hirofumi; Iba Koh; Kawasaki Tsutomu; Shimamoto Ko
Regulation of rice NADPH oxidase by binding of Rac GTPase to its N-terminal extension.
The Plant cell 2007;19(12):4022-34.
2007: Fujiwara Masayuki; Wong Hann Ling; Shimamoto Ko
[New aspect of rice pathology research revealed by proteomics and bioimaging]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2007;52(6 Suppl):711-6.
2007: Tamaki Shojiro; Matsuo Shoichi; Wong Hann Ling; Yokoi Shuji; Shimamoto Ko
Hd3a protein is a mobile flowering signal in rice.
Science (New York, N.Y.) 2007;316(5827):1033-6.
2006: Ishikawa Ryo; Yokoi Shuji; Shimamoto Ko
[Molecular basis of night break effect on the photoperiodic control of flowering in rice]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2006;51(8):933-42.
2006: Fujiwara Masayuki; Umemura Kenji; Kawasaki Tsutomu; Shimamoto Ko
Proteomics of Rac GTPase signaling reveals its predominant role in elicitor-induced defense response of cultured rice cells.
Plant physiology 2006;140(2):734-45.
2006: Kawasaki Tsutomu; Koita Hisako; Nakatsubo Tomoyuki; Hasegawa Kana; Wakabayashi Kenichi; Takahashi Hiroki; Umemura Kenji; Umezawa Toshiaki; Shimamoto Ko
Cinnamoyl-CoA reductase, a key enzyme in lignin biosynthesis, is an effector of small GTPase Rac in defense signaling in rice.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(1):230-5.
2006: Isshiki Masayuki; Tsumoto Ayako; Shimamoto Ko
The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA.
The Plant cell 2006;18(1):146-58.
2005: Ishikawa Ryo; Tamaki Shojiro; Yokoi Shuji; Inagaki Noritoshi; Shinomura Tomoko; Takano Makoto; Shimamoto Ko
Suppression of the floral activator Hd3a is the principal cause of the night break effect in rice.
The Plant cell 2005;17(12):3326-36.
2005: Miki Daisuke; Itoh Rika; Shimamoto Ko
RNA silencing of single and multiple members in a gene family of rice.
Plant physiology 2005;138(4):1903-13.
2005: Lieberherr Damien; Thao Nguyen Phuong; Nakashima Ayako; Umemura Kenji; Kawasaki Tsutomu; Shimamoto Ko
A sphingolipid elicitor-inducible mitogen-activated protein kinase is regulated by the small GTPase OsRac1 and heterotrimeric G-protein in rice 1[w].
Plant physiology 2005;138(3):1644-52.
2005: Moritoh Satoru; Miki Daisuke; Akiyama Masahiro; Kawahara Mihoko; Izawa Takeshi; Maki Hisaji; Shimamoto Ko
RNAi-mediated silencing of OsGEN-L (OsGEN-like), a new member of the RAD2/XPG nuclease family, causes male sterility by defect of microspore development in rice.
Plant & cell physiology 2005;46(5):699-715.
2005: Tsunezuka Hajime; Fujiwara Masayuki; Kawasaki Tsutomu; Shimamoto Ko
Proteome analysis of programmed cell death and defense signaling using the rice lesion mimic mutant cdr2.
Molecular plant-microbe interactions : MPMI 2005;18(1):52-9.
2004: Morino Kazuko; Olsen Odd-Arne; Shimamoto Ko
Silencing of the aleurone-specific Ltp2-gus gene in transgenic rice is reversed by transgene rearrangements and loss of aberrant transcripts.
Plant & cell physiology 2004;45(10):1500-8.
2004: Wong Hann Ling; Sakamoto Tsuyoshi; Kawasaki Tsutomu; Umemura Kenji; Shimamoto Ko
Down-regulation of metallothionein, a reactive oxygen scavenger, by the small GTPase OsRac1 in rice.
Plant physiology 2004;135(3):1447-56.
2004: Miki Daisuke; Shimamoto Ko
Simple RNAi vectors for stable and transient suppression of gene function in rice.
Plant & cell physiology 2004;45(4):490-5.
2003: Takahashi Akira; Kawasaki Tsutomu; Wong Hann Ling; Suharsono Utut; Hirano Hisashi; Shimamoto Ko
Hyperphosphorylation of a mitochondrial protein, prohibitin, is induced by calyculin A in a rice lesion-mimic mutant cdr1.
Plant physiology 2003;132(4):1861-9.
2003: Hayama Ryosuke; Yokoi Shuji; Tamaki Shojiro; Yano Masahiro; Shimamoto Ko
Adaptation of photoperiodic control pathways produces short-day flowering in rice.
Nature 2003;422(6933):719-22.
2002: Suharsono Utut; Fujisawa Yukiko; Kawasaki Tsutomu; Iwasaki Yukimoto; Satoh Hikaru; Shimamoto Ko
The heterotrimeric G protein alpha subunit acts upstream of the small GTPase Rac in disease resistance of rice.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(20):13307-12.
2002: Izawa Takeshi; Oikawa Tetsuo; Sugiyama Nobuko; Tanisaka Takatoshi; Yano Masahiro; Shimamoto Ko
Phytochrome mediates the external light signal to repress FT orthologs in photoperiodic flowering of rice.
Genes & development 2002;16(15):2006-20.
2002: Hayama Ryousuke; Izawa Takeshi; Shimamoto Ko
Isolation of rice genes possibly involved in the photoperiodic control of flowering by a fluorescent differential display method.
Plant & cell physiology 2002;43(5):494-504.
2002: Shimamoto Ko; Kyozuka Junko
Rice as a model for comparative genomics of plants.
Annual review of plant biology 2002;53():399-419.
2001: Sugiyama N; Izawa T; Oikawa T; Shimamoto K
Light regulation of circadian clock-controlled gene expression in rice.
The Plant journal : for cell and molecular biology 2001;26(6):607-15.
2001: Isshiki M; Yamamoto Y; Satoh H; Shimamoto K
Nonsense-mediated decay of mutant waxy mRNA in rice.
Plant physiology 2001;125(3):1388-95.
2001: Komatsu M; Maekawa M; Shimamoto K; Kyozuka J
The LAX1 and FRIZZY PANICLE 2 genes determine the inflorescence architecture of rice by controlling rachis-branch and spikelet development.
Developmental biology 2001;231(2):364-73.
2001: Ono E; Wong H L; Kawasaki T; Hasegawa M; Kodama O; Shimamoto K
Essential role of the small GTPase Rac in disease resistance of rice.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(2):759-64.
2000: Isshiki M; Nakajima M; Satoh H; Shimamoto K
dull: rice mutants with tissue-specific effects on the splicing of the waxy pre-mRNA.
The Plant journal : for cell and molecular biology 2000;23(4):451-60.
2000: Terada R; Nakajima M; Isshiki M; Okagaki R J; Wessler S R; Shimamoto K
Antisense waxy genes with highly active promoters effectively suppress waxy gene expression in transgenic rice.
Plant & cell physiology 2000;41(7):881-8.
2000: Kyozuka J; Kobayashi T; Morita M; Shimamoto K
Spatially and temporally regulated expression of rice MADS box genes with similarity to Arabidopsis class A, B and C genes.
Plant & cell physiology 2000;41(6):710-8.
2000: Izawa T; Oikawa T; Tokutomi S; Okuno K; Shimamoto K
Phytochromes confer the photoperiodic control of flowering in rice (a short-day plant).
The Plant journal : for cell and molecular biology 2000;22(5):391-9.
1999: Enoki H; Izawa T; Kawahara M; Komatsu M; Koh S; Kyozuka J; Shimamoto K
Ac as a tool for the functional genomics of rice.
The Plant journal : for cell and molecular biology 1999;19(5):605-13.
1999: Kawasaki T; Henmi K; Ono E; Hatakeyama S; Iwano M; Satoh H; Shimamoto K
The small GTP-binding protein rac is a regulator of cell death in plants.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(19):10922-6.
1999: Takahashi A; Kawasaki T; Henmi K; ShiI K; Kodama O; Satoh H; Shimamoto K
Lesion mimic mutants of rice with alterations in early signaling events of defense.
The Plant journal : for cell and molecular biology 1999;17(5):535-45.
1999: Morino K; Olsen O A; Shimamoto K
Silencing of an aleurone-specific gene in transgenic rice is caused by a rearranged transgene.
The Plant journal : for cell and molecular biology 1999;17(3):275-85.
1998: Isshiki M; Morino K; Nakajima M; Okagaki R J; Wessler S R; Izawa T; Shimamoto K
A naturally occurring functional allele of the rice waxy locus has a GT to TT mutation at the 5' splice site of the first intron.
The Plant journal : for cell and molecular biology 1998;15(1):133-8.
1998: Kyozuka J; Konishi S; Nemoto K; Izawa T; Shimamoto K
Down-regulation of RFL, the FLO/LFY homolog of rice, accompanied with panicle branch initiation.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(5):1979-82.
1997: Izawa T; Ohnishi T; Nakano T; Ishida N; Enoki H; Hashimoto H; Itoh K; Terada R; Wu C; Miyazaki C; Endo T; Iida S; Shimamoto K
Transposon tagging in rice.
Plant molecular biology 1997;35(1-2):219-29.
1997: Itoh K; Nakajima M; Shimamoto K
Silencing of waxy genes in rice containing Wx transgenes.
Molecular & general genetics : MGG 1997;255(4):351-8.
1996: Ono A; Izawa T; Chua N H; Shimamoto K
The rab16B promoter of rice contains two distinct abscisic acid-responsive elements.
Plant physiology 1996;112(2):483-91.
1996: Izawa T; Ishida N; Shimamoto K
[Transposon tagging using transgenic plants]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1996;41(9):1415-21; discussion 1397-8.
1995: Terada R; Nakayama T; Iwabuchi M; Shimamoto K
A type I element composed of the hexamer (ACGTCA) and octamer (CGCGGATC) motifs plays a role(s) in meristematic expression of a wheat histone H3 gene in transgenic rice plants.
Plant molecular biology 1995;27(1):17-26.
1994: Kyozuka J; Olive M; Peacock W J; Dennis E S; Shimamoto K
Promoter elements required for developmental expression of the maize Adh1 gene in transgenic rice.
The Plant cell 1994;6(6):799-810.
1993: Fujimoto H; Itoh K; Yamamoto M; Kyozuka J; Shimamoto K
Insect resistant rice generated by introduction of a modified delta-endotoxin gene of Bacillus thuringiensis.
Bio/technology (Nature Publishing Company) 1993;11(10):1151-5.
1993: Kyozuka J; McElroy D; Hayakawa T; Xie Y; Wu R; Shimamoto K
Light-regulated and cell-specific expression of tomato rbcS-gusA and rice rbcS-gusA fusion genes in transgenic rice.
Plant physiology 1993;102(3):991-1000.
1993: Shimamoto K; Miyazaki C; Hashimoto H; Izawa T; Itoh K; Terada R; Inagaki Y; Iida S
Trans-activation and stable integration of the maize transposable element Ds cotransfected with the Ac transposase gene in transgenic rice plants.
Molecular & general genetics : MGG 1993;239(3):354-60.
1993: Iwabuchi M; Kyozuka J; Shimamoto K
Processing followed by complete editing of an altered mitochondrial atp6 RNA restores fertility of cytoplasmic male sterile rice.
The EMBO journal 1993;12(4):1437-46.
1993: Terada R; Nakayama T; Iwabuchi M; Shimamoto K
A wheat histone H3 promoter confers cell division-dependent and -independent expression of the gus A gene in transgenic rice plants.
The Plant journal : for cell and molecular biology 1993;3(2):241-52.
1992: Hayakawa T; Zhu Y; Itoh K; Kimura Y; Izawa T; Shimamoto K; Toriyama S
Genetically engineered rice resistant to rice stripe virus, an insect-transmitted virus.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(20):9865-9.
1992: Kyozuka J; Shimamoto K
[Analysis of gene expression in cereal species]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1992;37(7):1287-91.
1991: Kyozuka J; Fujimoto H; Izawa T; Shimamoto K
Anaerobic induction and tissue-specific expression of maize Adh1 promoter in transgenic rice plants and their progeny.
Molecular & general genetics : MGG 1991;228(1-2):40-8.
1991: Izawa T; Miyazaki C; Yamamoto M; Terada R; Iida S; Shimamoto K
Introduction and transposition of the maize transposable element Ac in rice (Oryza sativa L.).
Molecular & general genetics : MGG 1991;227(3):391-6.
1990: Tanaka A; Mita S; Ohta S; Kyozuka J; Shimamoto K; Nakamura K
Enhancement of foreign gene expression by a dicot intron in rice but not in tobacco is correlated with an increased level of mRNA and an efficient splicing of the intron.
Nucleic acids research 1990;18(23):6767-70.

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