Preview
Sign-in for full Details 
Sign-in free and Explore the Exciting World of BiomedExperts:
- Over 1.500.000 Profiles
- More than 1.800 Organizations worldwide
- State of the Art Network Visualizations
- Manage your own Profile
- Locate Experts in your Country/Region
- Locate Experts in your 1. and 2. Level Network
- Connect to Experts Worldwide
NetworkView
Mikako Shirouzu
This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers
together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles
free of charge to researchers worldwide.
Research Profile (preview)
Genes & Molecular Sequences
Concepts & Ideas
Procedures
Living Beings
Chemicals & Drugs
Phenomena
Physiology
Sign-in to see full Profile
Network (preview)
158
Yokoyama, Shigeyuki
89
Terada, Takaho
43
Kigawa, Takanori
43
Kuramitsu, Seiki
29
Murayama, Kazutaka
29
Tanaka, Akiko
28
Inoue, Makoto
24
Yabuki, Takashi
20
Seki, Eiko
18
Matsuda, Takayoshi
17
Aoki, Masaaki
16
Koshiba, Seizo
15
Hayashizaki, Yoshihide
15
Bessho, Yoshitaka
13
Güntert, Peter
Sign-in to see all Coauthors
Publications
Sign-in to see all Publications
Sign in free and see...
Visualized networks:
See your personal network in
sophisticated graphical views
GeoTargeted Searches:
Locate experts around the world
and connect with global collaborators
Research Profiles:
See the visualized research activity
of experts around the globe
Sign-in to see more
Geonetwork of Mikako Shirouzu (preview)
Cities where this author has publications
Cities where co-authors of this author have publications
Sign-in to see more
All Publications
-
2009: Arai Ryoichi; Murayama Kazutaka; Uchikubo-Kamo Tomomi; Nishimoto Madoka; Toyama Mitsutoshi; Kuramitsu Seiki; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
Journal of structural biology 2009;168(3):575-81.
-
2009: Shimono Kazumi; Goto Mie; Kikukawa Takashi; Miyauchi Seiji; Shirouzu Mikako; Kamo Naoki; Yokoyama Shigeyuki
Production of functional bacteriorhodopsin by an Escherichia coli cell-free protein synthesis system supplemented with steroid detergent and lipid.
Protein science : a publication of the Protein Society 2009;18(10):2160-71.
-
2009: Hosaka Toshiaki; Murayama Kazutaka; Kato-Murayama Miyuki; Urushibata Akiko; Akasaka Ryogo; Terada Takaho; Shirouzu Mikako; Kuramitsu Seiki; Yokoyama Shigeyuki
Structure of the putative thioesterase protein TTHA1846 from Thermus thermophilus HB8 complexed with coenzyme A and a zinc ion.
Acta crystallographica. Section D, Biological crystallography 2009;65(Pt 8):767-76.
-
2009: Tsuda Kengo; Kuwasako Kanako; Takahashi Mari; Someya Tatsuhiko; Inoue Makoto; Terada Takaho; Kobayashi Naohiro; Shirouzu Mikako; Kigawa Takanori; Tanaka Akiko; Sugano Sumio; Güntert Peter; Muto Yutaka; Yokoyama Shigeyuki
Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3.
Nucleic acids research 2009;37(15):5151-66.
-
2009: Kawashima Toshiyuki; Bao Ying Chun; Minoshima Yukinori; Nomura Yasushi; Hatori Tomonori; Hori Tetsuya; Fukagawa Tatsuo; Fukada Toshiyuki; Takahashi Noriko; Nosaka Tetsuya; Inoue Makoto; Sato Tomohiro; Kukimoto-Niino Mutsuko; Shirouzu Mikako; Yokoyama Shigeyuki; Kitamura Toshio
A Rac GTPase-activating protein, MgcRacGAP, is a nuclear localizing signal-containing nuclear chaperone in the activation of STAT transcription factors.
Molecular and cellular biology 2009;29(7):1796-813.
-
2009: Wang Hongfei; Takemoto Chie; Akasaka Ryogo; Uchikubo-Kamo Tomomi; Kishishita Seiichiro; Murayama Kazutaka; Terada Takaho; Chen Lirong; Liu Zhi-Jie; Wang Bi-Cheng; Sugano Sumio; Tanaka Akiko; Inoue Makoto; Kigawa Takanori; Shirouzu Mikako; Yokoyama Shigeyuki
Novel dimerization mode of the human Bcl-2 family protein Bak, a mitochondrial apoptosis regulator.
Journal of structural biology 2009;166(1):32-7.
-
2009: Sakamoto Kensaku; Murayama Kazutaka; Oki Kenji; Iraha Fumie; Kato-Murayama Miyuki; Takahashi Masahiro; Ohtake Kazumasa; Kobayashi Takatsugu; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Genetic encoding of 3-iodo-L-tyrosine in Escherichia coli for single-wavelength anomalous dispersion phasing in protein crystallography.
Structure (London, England : 1993) 2009;17(3):335-44.
-
2009: Harada Masayo; Murakami Hirotaka; Okawa Akihiko; Okimoto Noriaki; Hiraoka Shuichi; Nakahara Taka; Akasaka Ryogo; Shiraishi Yo-Ichi; Futatsugi Noriyuki; Mizutani-Koseki Yoko; Kuroiwa Atsushi; Shirouzu Mikako; Yokoyama Shigeyuki; Taiji Makoto; Iseki Sachiko; Ornitz David M; Koseki Haruhiko
FGF9 monomer-dimer equilibrium regulates extracellular matrix affinity and tissue diffusion.
Nature genetics 2009;41(3):289-98.
-
2009: Itoh Yuzuru; Sekine Shun-ichi; Matsumoto Eiko; Akasaka Ryogo; Takemoto Chie; Shirouzu Mikako; Yokoyama Shigeyuki
Structure of selenophosphate synthetase essential for selenium incorporation into proteins and RNAs.
Journal of molecular biology 2009;385(5):1456-69.
-
2009: He Fahu; Dang Weirong; Abe Chikage; Tsuda Kengo; Inoue Makoto; Watanabe Satoru; Kobayashi Naohiro; Kigawa Takanori; Matsuda Takayoshi; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Harada Takushi; Tomabechi Yuri; Terada Takaho; Shirouzu Mikako; Tanaka Akiko; Güntert Peter; Muto Yutaka; Yokoyama Shigeyuki
Solution structure of the RNA binding domain in the human muscleblind-like protein 2.
Protein science : a publication of the Protein Society 2009;18(1):80-91.
-
2008: Murayama Kazutaka; Kato-Murayama Miyuki; Mishima Chiemi; Akasaka Ryogo; Shirouzu Mikako; Fukui Yasuhisa; Yokoyama Shigeyuki
Crystal structure of the Bruton's tyrosine kinase PH domain with phosphatidylinositol.
Biochemical and biophysical research communications 2008;377(1):23-8.
-
2008: Ihsanawati; Nishimoto Madoka; Higashijima Kyoko; Shirouzu Mikako; Grosjean Henri; Bessho Yoshitaka; Yokoyama Shigeyuki
Crystal structure of tRNA N2,N2-guanosine dimethyltransferase Trm1 from Pyrococcus horikoshii.
Journal of molecular biology 2008;383(4):871-84.
-
2008: Kusano Seisuke; Kukimoto-Niino Mutsuko; Akasaka Ryogo; Toyama Mitsutoshi; Terada Takaho; Shirouzu Mikako; Shindo Takayuki; Yokoyama Shigeyuki
Crystal structure of the human receptor activity-modifying protein 1 extracellular domain.
Protein science : a publication of the Protein Society 2008;17(11):1907-14.
-
2008: Kukimoto-Niino Mutsuko; Sakamoto Ayako; Kanno Eiko; Hanawa-Suetsugu Kyoko; Terada Takaho; Shirouzu Mikako; Fukuda Mitsunori; Yokoyama Shigeyuki
Structural basis for the exclusive specificity of Slac2-a/melanophilin for the Rab27 GTPases.
Structure (London, England : 1993) 2008;16(10):1478-90.
-
2008: Nagata Takashi; Suzuki Sakura; Endo Ryuta; Shirouzu Mikako; Terada Takaho; Inoue Makoto; Kigawa Takanori; Kobayashi Naohiro; Güntert Peter; Tanaka Akiko; Hayashizaki Yoshihide; Muto Yutaka; Yokoyama Shigeyuki
The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition.
Nucleic acids research 2008;36(14):4754-67.
-
2008: Itoh Yuzuru; Sekine Shun-ichi; Kuroishi Chizu; Terada Takaho; Shirouzu Mikako; Kuramitsu Seiki; Yokoyama Shigeyuki
Crystallographic and mutational studies of seryl-tRNA synthetase from the archaeon Pyrococcus horikoshii.
RNA biology 2008;5(3):169-77.
-
2008: Handa Noriko; Mizohata Eiichi; Kishishita Seiichiro; Toyama Mitsutoshi; Morita Satoshi; Uchikubo-Kamo Tomomi; Akasaka Ryogo; Omori Kenji; Kotera Jun; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the GAF-B domain from human phosphodiesterase 10A complexed with its ligand, cAMP.
The Journal of biological chemistry 2008;283(28):19657-64.
-
2008: Yamamoto Misaki; Unzai Satoru; Saijo Shinya; Ito Kazuki; Mizutani Kenji; Suno-Ikeda Chiyo; Yabuki-Miyata Yukako; Terada Takaho; Toyama Mitsutoshi; Shirouzu Mikako; Kobayashi Takuya; Kakinuma Yoshimi; Yamato Ichiro; Yokoyama Shigeyuki; Iwata So; Murata Takeshi
Interaction and stoichiometry of the peripheral stalk subunits NtpE and NtpF and the N-terminal hydrophilic domain of NtpI of Enterococcus hirae V-ATPase.
The Journal of biological chemistry 2008;283(28):19422-31.
-
2008: Kuwasako Kanako; Takahashi Mari; Tochio Naoya; Abe Chikage; Tsuda Kengo; Inoue Makoto; Terada Takaho; Shirouzu Mikako; Kobayashi Naohiro; Kigawa Takanori; Taguchi Seiichi; Tanaka Akiko; Hayashizaki Yoshihide; Güntert Peter; Muto Yutaka; Yokoyama Shigeyuki
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
Biochemistry 2008;47(24):6437-50.
-
2008: Kuwasako Kanako; Dohmae Naoshi; Inoue Mio; Shirouzu Mikako; Taguchi Seiichi; Güntert Peter; Séraphin Bertrand; Muto Yutaka; Yokoyama Shigeyuki
Complex assembly mechanism and an RNA-binding mode of the human p14-SF3b155 spliceosomal protein complex identified by NMR solution structure and functional analyses.
Proteins 2008;71(4):1617-36.
-
2008: Kishishita Seiichiro; Shimizu Katsumi; Murayama Kazutaka; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki; Kunishima Naoki
Structures of two archaeal diphthine synthases: insights into the post-translational modification of elongation factor 2.
Acta crystallographica. Section D, Biological crystallography 2008;64(Pt 4):397-406.
-
2008: Nishimura Mitsuhiro; Kaminishi Tatsuya; Takemoto Chie; Kawazoe Masahito; Yoshida Takuya; Tanaka Akiko; Sugano Sumio; Shirouzu Mikako; Ohkubo Tadayasu; Yokoyama Shigeyuki; Kobayashi Yuji
Crystal structure of human ribosomal protein L10 core domain reveals eukaryote-specific motifs in addition to the conserved fold.
Journal of molecular biology 2008;377(2):421-30.
-
2007: Xie Yong; Takemoto Chie; Kishishita Seiichiro; Uchikubo-Kamo Tomomi; Murayama Kazutaka; Chen Lirong; Liu Zhi Jie; Wang Bi Cheng; Manzoku Miho; Ebihara Akio; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Structure of the minimized alpha/beta-hydrolase fold protein from Thermus thermophilus HB8.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 12):993-7.
-
2007: Handa Noriko; Kishishita Seiichiro; Morita Satoshi; Akasaka Ryogo; Jin Zhongmin; Chrzas John; Chen Lirong; Liu Zhi-Jie; Wang Bi-Cheng; Sugano Sumio; Tanaka Akiko; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki
Structure of the human Tim44 C-terminal domain in complex with pentaethylene glycol: ligand-bound form.
Acta crystallographica. Section D, Biological crystallography 2007;63(Pt 12):1225-34.
-
2007: Olsen Shaun K; Ota Naruhisa; Kishishita Seiichiro; Kukimoto-Niino Mutsuko; Murayama Kazutaka; Uchiyama Hidemi; Toyama Mitsutoshi; Terada Takaho; Shirouzu Mikako; Kanagawa Osami; Yokoyama Shigeyuki
Crystal Structure of the interleukin-15.interleukin-15 receptor alpha complex: insights into trans and cis presentation.
The Journal of biological chemistry 2007;282(51):37191-204.
-
2007: Shinkai Akeo; Ohbayashi Naomi; Terada Takaho; Shirouzu Mikako; Kuramitsu Seiki; Yokoyama Shigeyuki
Identification of promoters recognized by RNA polymerase-sigmaE holoenzyme from Thermus thermophilus HB8.
Journal of bacteriology 2007;189(23):8758-64.
-
2007: Kawasaki Y; Sagara M; Shibata Y; Shirouzu M; Yokoyama S; Akiyama T
Identification and characterization of Asef2, a guanine-nucleotide exchange factor specific for Rac1 and Cdc42.
Oncogene 2007;26(55):7620-267.
-
2007: Nishimura Mitsuhiro; Kaminishi Tatsuya; Kawazoe Masahito; Shirouzu Mikako; Takemoto Chie; Yokoyama Shigeyuki; Tanaka Akiko; Sugano Sumio; Yoshida Takuya; Ohkubo Tadayasu; Kobayashi Yuji
Purification, crystallization and preliminary X-ray diffraction study of human ribosomal protein L10 core domain.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 11):950-2.
-
2007: Shinkai Akeo; Sekine Shun-Ichi; Urushibata Akiko; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki
The putative DNA-binding protein Sto12a from the thermoacidophilic archaeon Sulfolobus tokodaii contains intrachain and interchain disulfide bonds.
Journal of molecular biology 2007;372(5):1293-304.
-
2007: Suzuki Sakura; Tatsuguchi Ayako; Matsumoto Eiko; Kawazoe Masahito; Kaminishi Tatsuya; Shirouzu Mikako; Muto Yutaka; Takemoto Chie; Yokoyama Shigeyuki
Structural characterization of the ribosome maturation protein, RimM.
Journal of bacteriology 2007;189(17):6397-406.
-
2007: He Fahu; Umehara Takashi; Tsuda Kengo; Inoue Makoto; Kigawa Takanori; Matsuda Takayoshi; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Terada Takaho; Shirouzu Mikako; Tanaka Akiko; Sugano Sumio; Muto Yutaka; Yokoyama Shigeyuki
Solution structure of the zinc finger HIT domain in protein FON.
Protein science : a publication of the Protein Society 2007;16(8):1577-87.
-
2007: Doi-Katayama Yukiko; Hayashi Fumiaki; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Kigawa Takanori; Yoshida Mayumi; Shirouzu Mikako; Terada Takaho; Hayashizaki Yoshihide; Yokoyama Shigeyuki; Hirota Hiroshi
Solution structure of the general transcription factor 2I domain in mouse TFII-I protein.
Protein science : a publication of the Protein Society 2007;16(8):1788-92.
-
2007: Nakamura Yoshihiro; Umehara Takashi; Hamana Hiroaki; Hayashizaki Yoshihide; Inoue Makoto; Kigawa Takanori; Shirouzu Mikako; Terada Takaho; Tanaka Akiko; Padmanabhan Balasundaram; Yokoyama Shigeyuki
Crystal structure analysis of the PHD domain of the transcription co-activator Pygopus.
Journal of molecular biology 2007;370(1):80-92.
-
2007: Shimada Atsushi; Niwa Hideaki; Tsujita Kazuya; Suetsugu Shiro; Nitta Koji; Hanawa-Suetsugu Kyoko; Akasaka Ryogo; Nishino Yuri; Toyama Mitsutoshi; Chen Lirong; Liu Zhi-Jie; Wang Bi-Cheng; Yamamoto Masaki; Terada Takaho; Miyazawa Atsuo; Tanaka Akiko; Sugano Sumio; Shirouzu Mikako; Nagayama Kuniaki; Takenawa Tadaomi; Yokoyama Shigeyuki
Curved EFC/F-BAR-domain dimers are joined end to end into a filament for membrane invagination in endocytosis.
Cell 2007;129(4):761-72.
-
2007: Bessho Yoshitaka; Shibata Rie; Sekine Shun-ichi; Murayama Kazutaka; Higashijima Kyoko; Hori-Takemoto Chie; Shirouzu Mikako; Kuramitsu Seiki; Yokoyama Shigeyuki
Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(20):8293-8.
-
2007: Yoneyama Misao; Tochio Naoya; Umehara Takashi; Koshiba Seizo; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Watanabe Satoru; Tomo Yasuko; Nishimura Yuji; Harada Takushi; Terada Takaho; Shirouzu Mikako; Hayashizaki Yoshihide; Ohara Osamu; Tanaka Akiko; Kigawa Takanori; Yokoyama Shigeyuki
Structural and functional differences of SWIRM domain subtypes.
Journal of molecular biology 2007;369(1):222-38.
-
2007: Arai Ryoichi; Ito Kaori; Ohnishi Tetsuo; Ohba Hisako; Akasaka Ryogo; Bessho Yoshitaka; Hanawa-Suetsugu Kyoko; Yoshikawa Takeo; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures.
Proteins 2007;67(3):732-42.
-
2007: Takada Kazuma; Takemoto Chie; Kawazoe Masahito; Konno Takayuki; Hanawa-Suetsugu Kyoko; Lee Sungga; Shirouzu Mikako; Yokoyama Shigeyuki; Muto Akira; Himeno Hyouta
In vitro trans-translation of Thermus thermophilus: ribosomal protein S1 is not required for the early stage of trans-translation.
RNA (New York, N.Y.) 2007;13(4):503-10.
-
2007: Kaminishi Tatsuya; Wilson Daniel N; Takemoto Chie; Harms Joerg M; Kawazoe Masahito; Schluenzen Frank; Hanawa-Suetsugu Kyoko; Shirouzu Mikako; Fucini Paola; Yokoyama Shigeyuki
A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine-Dalgarno interaction.
Structure (London, England : 1993) 2007;15(3):289-97.
-
2007: Connell Sean R; Takemoto Chie; Wilson Daniel N; Wang Hongfei; Murayama Kazutaka; Terada Takaho; Shirouzu Mikako; Rost Maximilian; Schüler Martin; Giesebrecht Jan; Dabrowski Marylena; Mielke Thorsten; Fucini Paola; Yokoyama Shigeyuki; Spahn Christian M T
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors.
Molecular cell 2007;25(5):751-64.
-
2007: Okazaki Nobuo; Kumei Maki; Manzoku Miho; Kuramitsu Seiki; Shirouzu Mikako; Shinkai Akeo; Yokoyama Shigeyuki
Structure of a UPF0150-family protein from Thermus thermophilus HB8.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 3):173-7.
-
2007: Yoshikawa Seiko; Arai Ryoichi; Kinoshita Yukiko; Uchikubo-Kamo Tomomi; Wakamatsu Taisuke; Akasaka Ryogo; Masui Ryoji; Terada Takaho; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Structure of archaeal glyoxylate reductase from Pyrococcus horikoshii OT3 complexed with nicotinamide adenine dinucleotide phosphate.
Acta crystallographica. Section D, Biological crystallography 2007;63(Pt 3):357-65.
-
2007: Shibata Rie; Bessho Yoshitaka; Shinkai Akeo; Nishimoto Madoka; Fusatomi Emiko; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure and RNA-binding analysis of the archaeal transcription factor NusA.
Biochemical and biophysical research communications 2007;355(1):122-8.
-
2007: Dong Xuesong; Kato-Murayama Miyuki; Muramatsu Tomonari; Mori Hirotada; Shirouzu Mikako; Bessho Yoshitaka; Yokoyama Shigeyuki
The crystal structure of leucyl/phenylalanyl-tRNA-protein transferase from Escherichia coli.
Protein science : a publication of the Protein Society 2007;16(3):528-34.
-
2007: Tanaka Hiroaki; Umehara Takashi; Inaka Koji; Takahashi Sachiko; Shibata Rie; Bessho Yoshitaka; Sato Masaru; Sugiyama Shigeru; Fusatomi Emiko; Terada Takaho; Shirouzu Mikako; Sano Satoshi; Motohara Moritoshi; Kobayashi Tomoyuki; Tanaka Tetsuo; Tanaka Akiko; Yokoyama Shigeyuki
Crystallization of the archaeal transcription termination factor NusA: a significant decrease in twinning under microgravity conditions.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 2):69-73.
-
2007: Ohnishi Satoshi; Güntert Peter; Koshiba Seizo; Tomizawa Tadashi; Akasaka Ryogo; Tochio Naoya; Sato Manami; Inoue Makoto; Harada Takushi; Watanabe Satoru; Tanaka Akiko; Shirouzu Mikako; Kigawa Takanori; Yokoyama Shigeyuki
Solution structure of an atypical WW domain in a novel beta-clam-like dimeric form.
FEBS letters 2007;581(3):462-8.
-
2007: Murayama Kazutaka; Shirouzu Mikako; Kawasaki Yoshihiro; Kato-Murayama Miyuki; Hanawa-Suetsugu Kyoko; Sakamoto Ayako; Katsura Yasuhiro; Suenaga Atsushi; Toyama Mitsutoshi; Terada Takaho; Taiji Makoto; Akiyama Tetsu; Yokoyama Shigeyuki
Crystal structure of the rac activator, Asef, reveals its autoinhibitory mechanism.
The Journal of biological chemistry 2007;282(7):4238-42.
-
2007: Nakamura Yoshihiro; Umehara Takashi; Nakano Kazumi; Jang Moon Kyoo; Shirouzu Mikako; Morita Satoshi; Uda-Tochio Hiroko; Hamana Hiroaki; Terada Takaho; Adachi Naruhiko; Matsumoto Takehisa; Tanaka Akiko; Horikoshi Masami; Ozato Keiko; Padmanabhan Balasundaram; Yokoyama Shigeyuki
Crystal structure of the human BRD2 bromodomain: insights into dimerization and recognition of acetylated histone H4.
The Journal of biological chemistry 2007;282(6):4193-201.
-
2007: Kodama Koichiro; Fukuzawa Seketsu; Nakayama Hiroshi; Sakamoto Kensaku; Kigawa Takanori; Yabuki Takashi; Matsuda Natsuko; Shirouzu Mikako; Takio Koji; Yokoyama Shigeyuki; Tachibana Kazuo
Site-specific functionalization of proteins by organopalladium reactions.
Chembiochem : a European journal of chemical biology 2007;8(2):232-8.
-
2007: Takada Kazuma; Takemoto Chie; Kawazoe Masahito; Shirouzu Mikako; Yokoyama Shigeyuki; Muto Akira; Himeno Hyouta
Thermus thermophilus tmRNA and trans-translation.
Nucleic acids symposium series (2004) 2007;(51):369-70.
-
2006: Hiyama Takuya B; Zhao Min; Kitago Yu; Yao Min; Sekine Shun-Ichi; Terada Takaho; Kuroishi Chizu; Liu Zhi-Jie; Rose John P; Kuramitsu Seiki; Shirouzu Mikako; Watanabe Nobuhisa; Yokoyama Shigeyuki; Tanaka Isao; Wang Bi-Cheng
Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins.
Journal of structural and functional genomics 2006;7(3-4):119-29.
-
2006: Handa Noriko; Kukimoto-Niino Mutsuko; Akasaka Ryogo; Murayama Kazutaka; Terada Takaho; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Nunokawa Emi; Tanaka Akiko; Hayashizaki Yoshihide; Kigawa Takanori; Shirouzu Mikako; Yokoyama Shigeyuki
Structure of the UNC5H2 death domain.
Acta crystallographica. Section D, Biological crystallography 2006;62(Pt 12):1502-9.
-
2006: Tochio Naoya; Koshiba Seizo; Kobayashi Naohiro; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Tomo Yasuko; Motoda Yoko; Kobayashi Atsuo; Tanaka Akiko; Hayashizaki Yoshihide; Terada Takaho; Shirouzu Mikako; Kigawa Takanori; Yokoyama Shigeyuki
Solution structure of the kinase-associated domain 1 of mouse microtubule-associated protein/microtubule affinity-regulating kinase 3.
Protein science : a publication of the Protein Society 2006;15(11):2534-43.
-
2006: Suetsugu Shiro; Murayama Kazutaka; Sakamoto Ayako; Hanawa-Suetsugu Kyoko; Seto Azusa; Oikawa Tsukasa; Mishima Chiemi; Shirouzu Mikako; Takenawa Tadaomi; Yokoyama Shigeyuki
The RAC binding domain/IRSp53-MIM homology domain of IRSp53 induces RAC-dependent membrane deformation.
The Journal of biological chemistry 2006;281(46):35347-58.
-
2006: Sasaki Hiroshi M; Sekine Shun-ichi; Sengoku Toru; Fukunaga Ryuya; Hattori Motoyuki; Utsunomiya Yukiko; Kuroishi Chizu; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Structural and mutational studies of the amino acid-editing domain from archaeal/eukaryal phenylalanyl-tRNA synthetase.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(40):14744-9.
-
2006: Schluenzen Frank; Takemoto Chie; Wilson Daniel N; Kaminishi Tatsuya; Harms Joerg M; Hanawa-Suetsugu Kyoko; Szaflarski Witold; Kawazoe Masahito; Shirouzu Mikako; Nierhaus Knud H; Yokoyama Shigeyuki; Fucini Paola
The antibiotic kasugamycin mimics mRNA nucleotides to destabilize tRNA binding and inhibit canonical translation initiation.
Nature structural & molecular biology 2006;13(10):871-8.
-
2006: Kodama Koichiro; Fukuzawa Seketsu; Sakamoto Kensaku; Nakayama Hiroshi; Kigawa Takanori; Yabuki Takashi; Matsuda Natsuko; Shirouzu Mikako; Takio Koji; Tachibana Kazuo; Yokoyama Shigeyuki
A new protein engineering approach combining chemistry and biology, part I; site-specific incorporation of 4-iodo-L-phenylalanine in vitro by using misacylated suppressor tRNAPhe.
Chembiochem : a European journal of chemical biology 2006;7(10):1577-81.
-
2006: Handa Noriko; Kukimoto-Niino Mutsuko; Akasaka Ryogo; Kishishita Seiichiro; Murayama Kazutaka; Terada Takaho; Inoue Makoto; Kigawa Takanori; Kose Shingo; Imamoto Naoko; Tanaka Akiko; Hayashizaki Yoshihide; Shirouzu Mikako; Yokoyama Shigeyuki
The crystal structure of mouse Nup35 reveals atypical RNP motifs and novel homodimerization of the RRM domain.
Journal of molecular biology 2006;363(1):114-24.
-
2006: Kukimoto-Niino Mutsuko; Takagi Tetsuo; Akasaka Ryogo; Murayama Kazutaka; Uchikubo-Kamo Tomomi; Terada Takaho; Inoue Makoto; Watanabe Satoru; Tanaka Akiko; Hayashizaki Yoshihide; Kigawa Takanori; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the RUN domain of the RAP2-interacting protein x.
The Journal of biological chemistry 2006;281(42):31843-53.
-
2006: Tokmakov Alexander A; Terazawa Yumiko; Ikeda Mariko; Shirouzu Mikako; Yokoyama Shigeyuki
Coupled transcription-and-translation in Xenopus oocyte and egg extracts.
Journal of biotechnology 2006;125(4):557-64.
-
2006: Dong Xuesong; Bessho Yoshitaka; Shibata Rie; Nishimoto Madoka; Shirouzu Mikako; Kuramitsu Seiki; Yokoyama Shigeyuki
Crystal structure of tRNA pseudouridine synthase TruA from Thermus thermophilus HB8.
RNA biology 2006;3(3):115-22.
-
2006: Iwasaki Wataru; Sekine Shun-ichi; Kuroishi Chizu; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Structural basis of the water-assisted asparagine recognition by asparaginyl-tRNA synthetase.
Journal of molecular biology 2006;360(2):329-42.
-
2006: Hattori Motoyuki; Mizohata Eiichi; Tatsuguchi Ayako; Shibata Rie; Kishishita Seiichiro; Murayama Kazutaka; Terada Takaho; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the single-domain rhodanese homologue TTHA0613 from Thermus thermophilus HB8.
Proteins 2006;64(1):284-7.
-
2006: Ito Kaori; Arai Ryoichi; Fusatomi Emiko; Kamo-Uchikubo Tomomi; Kawaguchi Shin-Ichi; Akasaka Ryogo; Terada Takaho; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the conserved protein TTHA0727 from Thermus thermophilus HB8 at 1.9 A resolution: A CMD family member distinct from carboxymuconolactone decarboxylase (CMD) and AhpD.
Protein science : a publication of the Protein Society 2006;15(5):1187-92.
-
2006: Hamada Toshiyuki; Ito Yoko; Abe Takamasa; Hayashi Fumiaki; Güntert Peter; Inoue Makoto; Kigawa Takanori; Terada Takaho; Shirouzu Mikako; Yoshida Mayumi; Tanaka Akiko; Sugano Sumio; Yokoyama Shigeyuki; Hirota Hiroshi
Solution structure of the antifreeze-like domain of human sialic acid synthase.
Protein science : a publication of the Protein Society 2006;15(5):1010-6.
-
2006: Arai Ryoichi; Yoshikawa Seiko; Murayama Kazutaka; Imai Yuzuru; Takahashi Ryosuke; Shirouzu Mikako; Yokoyama Shigeyuki
Structure of human ubiquitin-conjugating enzyme E2 G2 (UBE2G2/UBC7).
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 4):330-4.
-
2006: Yamasaki Kazuhiko; Kigawa Takanori; Inoue Makoto; Yamasaki Tomoko; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Tomo Yasuko; Terada Takaho; Shirouzu Mikako; Tanaka Akiko; Seki Motoaki; Shinozaki Kazuo; Yokoyama Shigeyuki
An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure.
FEBS letters 2006;580(8):2109-16.
-
2006: Chumpolkulwong Namthip; Sakamoto Kensaku; Hayashi Akiko; Iraha Fumie; Shinya Naoko; Matsuda Natsuko; Kiga Daisuke; Urushibata Akiko; Shirouzu Mikako; Oki Kenji; Kigawa Takanori; Yokoyama Shigeyuki
Translation of 'rare' codons in a cell-free protein synthesis system from Escherichia coli.
Journal of structural and functional genomics 2006;7(1):31-6.
-
2006: Tochio Naoya; Umehara Takashi; Koshiba Seizo; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Watanabe Satoru; Tomo Yasuko; Hanada Masaru; Ikari Masaomi; Sato Miyuki; Terada Takaho; Nagase Takahiro; Ohara Osamu; Shirouzu Mikako; Tanaka Akiko; Kigawa Takanori; Yokoyama Shigeyuki
Solution structure of the SWIRM domain of human histone demethylase LSD1.
Structure (London, England : 1993) 2006;14(3):457-68.
-
2006: Tokmakov Alexander A; Matsumoto Eiko; Shirouzu Mikako; Yokoyama Shigeyuki
Coupled cytoplasmic transcription-and-translation--a method of choice for heterologous gene expression in Xenopus oocytes.
Journal of biotechnology 2006;122(1):5-15.
-
2006: Inagaki Eiji; Sakamoto Keiko; Obayashi Naomi; Terada Takaho; Shirouzu Mikako; Bessho Yoshitaka; Kuroishi Chizu; Kuramitsu Seiki; Shinkai Akeo; Yokoyama Shigeyuki
Expression, purification, crystallization and preliminary X-ray diffraction analysis of galactokinase from Pyrococcus horikoshii.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 2):169-71.
-
2006: Arai Ryoichi; Kukimoto-Niino Mutsuko; Kuroishi Chizu; Bessho Yoshitaka; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the probable haloacid dehalogenase PH0459 from Pyrococcus horikoshii OT3.
Protein science : a publication of the Protein Society 2006;15(2):373-7.
-
2006: Kuratani Mitsuo; Sakai Hiroaki; Takahashi Masahiro; Yanagisawa Tatsuo; Kobayashi Takatsugu; Murayama Kazutaka; Chen Lirong; Liu Zhi-Jie; Wang Bi-Cheng; Kuroishi Chizu; Kuramitsu Seiki; Terada Takaho; Bessho Yoshitaka; Shirouzu Mikako; Sekine Shun-ichi; Yokoyama Shigeyuki
Crystal structures of tyrosyl-tRNA synthetases from Archaea.
Journal of molecular biology 2006;355(3):395-408.
-
2006: Kodama Koichiro; Fukuzawa Seketsu; Nakayama Hiroshi; Kigawa Takanori; Sakamoto Kensaku; Yabuki Takashi; Matsuda Natsuko; Shirouzu Mikako; Takio Koji; Tachibana Kazuo; Yokoyama Shigeyuki
Regioselective carbon-carbon bond formation in proteins with palladium catalysis; new protein chemistry by organometallic chemistry.
Chembiochem : a European journal of chemical biology 2006;7(1):134-9.
-
2005: Nameki Nobukazu; Someya Tatsuhiko; Okano Satoshi; Suemasa Reiko; Kimoto Michiko; Hanawa-Suetsugu Kyoko; Terada Takaho; Shirouzu Mikako; Hirao Ichiro; Takaku Hiroshi; Himeno Hyouta; Muto Akira; Kuramitsu Seiki; Yokoyama Shigeyuki; Kawai Gota
Interaction analysis between tmRNA and SmpB from Thermus thermophilus.
Journal of biochemistry 2005;138(6):729-39.
-
2005: Hattori Motoyuki; Mizohata Eiichi; Manzoku Miho; Bessho Yoshitaka; Murayama Kazutaka; Terada Takaho; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the hypothetical protein TTHA1013 from Thermus thermophilus HB8.
Proteins 2005;61(4):1117-20.
-
2005: Mizohata Eiichi; Sakai Hiroaki; Fusatomi Emiko; Terada Takaho; Murayama Kazutaka; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of an archaeal peroxiredoxin from the aerobic hyperthermophilic crenarchaeon Aeropyrum pernix K1.
Journal of molecular biology 2005;354(2):317-29.
-
2005: Pioszak Augen A; Murayama Kazutaka; Nakagawa Noriko; Ebihara Akio; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Structures of a putative RNA 5-methyluridine methyltransferase, Thermus thermophilus TTHA1280, and its complex with S-adenosyl-L-homocysteine.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 10):867-74.
-
2005: Li Hua; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Nunokawa Emi; Motoda Yoko; Kobayashi Atsuo; Terada Takaho; Shirouzu Mikako; Koshiba Seizo; Lin Yi-Jan; Güntert Peter; Suzuki Harukazu; Hayashizaki Yoshihide; Kigawa Takanori; Yokoyama Shigeyuki
Solution structure of the mouse enhancer of rudimentary protein reveals a novel fold.
Journal of biomolecular NMR 2005;32(4):329-34.
-
2005: Arai Ryoichi; Kukimoto-Niino Mutsuko; Uda-Tochio Hiroko; Morita Satoshi; Uchikubo-Kamo Tomomi; Akasaka Ryogo; Etou Yuuka; Hayashizaki Yoshihide; Kigawa Takanori; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of an enhancer of rudimentary homolog (ERH) at 2.1 Angstroms resolution.
Protein science : a publication of the Protein Society 2005;14(7):1888-93.
-
2005: Arai Ryoichi; Nishimoto Madoka; Toyama Mitsutoshi; Terada Takaho; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Conserved protein TTHA1554 from Thermus thermophilus HB8 binds to glutamine synthetase and cystathionine beta-lyase.
Biochimica et biophysica acta 2005;1750(1):40-7.
-
2005: Kurokawa Sayuri; Bessho Yoshitaka; Higashijima Kyoko; Shirouzu Mikako; Yokoyama Shigeyuki; Watanabe Kazuo I; Ohama Takeshi
Adaptation of intronic homing endonuclease for successful horizontal transmission.
The FEBS journal 2005;272(10):2487-96.
-
2005: Ishihara Goshi; Goto Mie; Saeki Mihoro; Ito Kaori; Hori Tetsuya; Kigawa Takanori; Shirouzu Mikako; Yokoyama Shigeyuki
Expression of G protein coupled receptors in a cell-free translational system using detergents and thioredoxin-fusion vectors.
Protein expression and purification 2005;41(1):27-37.
-
2005: Scott Anna; Pantoja-Uceda David; Koshiba Seizo; Inoue Makoto; Kigawa Takanori; Terada Takaho; Shirouzu Mikako; Tanaka Akiko; Sugano Sumio; Yokoyama Shigeyuki; Güntert Peter
Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.
Journal of biomolecular NMR 2005;31(4):357-61.
-
2005: Sharma Manjuli R; Barat Chandana; Wilson Daniel N; Booth Timothy M; Kawazoe Masahito; Hori-Takemoto Chie; Shirouzu Mikako; Yokoyama Shigeyuki; Fucini Paola; Agrawal Rajendra K
Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly.
Molecular cell 2005;18(3):319-29.
-
2005: Kato-Murayama Miyuki; Bessho Yoshitaka; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the RNA 2'-phosphotransferase from Aeropyrum pernix K1.
Journal of molecular biology 2005;348(2):295-305.
-
2005: Yamasaki Kazuhiko; Kigawa Takanori; Inoue Makoto; Yamasaki Tomoko; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Tomo Yasuko; Terada Takaho; Shirouzu Mikako; Tanaka Akiko; Seki Motoaki; Shinozaki Kazuo; Yokoyama Shigeyuki
Solution structure of the major DNA-binding domain of Arabidopsis thaliana ethylene-insensitive3-like3.
Journal of molecular biology 2005;348(2):253-64.
-
2005: Kurimoto Kazuki; Muto Yutaka; Obayashi Naomi; Terada Takaho; Shirouzu Mikako; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Kigawa Takanori; Okumura Hiromi; Tanaka Akiko; Shibata Norito; Kashikawa Maki; Agata Kiyokazu; Yokoyama Shigeyuki
Crystal structure of the N-terminal RecA-like domain of a DEAD-box RNA helicase, the Dugesia japonica vasa-like gene B protein.
Journal of structural biology 2005;150(1):58-68.
-
2005: Handa Noriko; Terada Takaho; Doi-Katayama Yukiko; Hirota Hiroshi; Tame Jeremy R H; Park Sam-Yong; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8.
Protein science : a publication of the Protein Society 2005;14(4):1004-10.
-
2005: Kuratani Mitsuo; Ishii Ryohei; Bessho Yoshitaka; Fukunaga Ryuya; Sengoku Toru; Shirouzu Mikako; Sekine Shun-Ichi; Yokoyama Shigeyuki
Crystal structure of tRNA adenosine deaminase (TadA) from Aquifex aeolicus.
The Journal of biological chemistry 2005;280(16):16002-8.
-
2005: Yamasaki Kazuhiko; Kigawa Takanori; Inoue Makoto; Tateno Masaru; Yamasaki Tomoko; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Tomo Yasuko; Hayami Nobuhiro; Terada Takaho; Shirouzu Mikako; Tanaka Akiko; Seki Motoaki; Shinozaki Kazuo; Yokoyama Shigeyuki
Solution structure of an Arabidopsis WRKY DNA binding domain.
The Plant cell 2005;17(3):944-56.
-
2005: Nameki Nobukazu; Tochio Naoya; Koshiba Seizo; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Fujikura Yukiko; Saito Miyuki; Ikari Masaomi; Watanabe Megumi; Terada Takaho; Shirouzu Mikako; Yoshida Mayumi; Hirota Hiroshi; Tanaka Akiko; Hayashizaki Yoshihide; Güntert Peter; Kigawa Takanori; Yokoyama Shigeyuki
Solution structure of the PWWP domain of the hepatoma-derived growth factor family.
Protein science : a publication of the Protein Society 2005;14(3):756-64.
-
2005: Kukimoto-Niino Mutsuko; Shibata Rie; Murayama Kazutaka; Hamana Hiroaki; Nishimoto Madoka; Bessho Yoshitaka; Terada Takaho; Shirouzu Mikako; Kuramitsu Seiki; Yokoyama Shigeyuki
Crystal structure of a predicted phosphoribosyltransferase (TT1426) from Thermus thermophilus HB8 at 2.01 A resolution.
Protein science : a publication of the Protein Society 2005;14(3):823-7.
-
2005: Murayama Kazutaka; Shirouzu Mikako; Terada Takaho; Kuramitsu Seiki; Yokoyama Shigeyuki
Crystal structure of TT1662 from Thermus thermophilus HB8: a member of the alpha/beta hydrolase fold enzymes.
Proteins 2005;58(4):982-4.
-
2005: Tokmakov Alexander; Iwasaki Tetsushi; Itakura Shuji; Sato Ken-Ichi; Shirouzu Mikako; Fukami Yasuo; Yokoyama Shigeyuki
Regulation of Src kinase activity during Xenopus oocyte maturation.
Developmental biology 2005;278(2):289-300.
-
2005: Murayama Kazutaka; Kato-Murayama Miyuki; Katsura Kazushige; Uchikubo-Kamo Tomomi; Yamaguchi-Hirafuji Machiko; Kawazoe Masahito; Akasaka Ryogo; Hanawa-Suetsugu Kyoko; Hori-Takemoto Chie; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki
Structure of a putative trans-editing enzyme for prolyl-tRNA synthetase from Aeropyrum pernix K1 at 1.7 A resolution.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 1):26-9.
-
2005: Sakai Hiroaki; Wang Hongfei; Takemoto-Hori Chie; Kaminishi Tatsuya; Yamaguchi Hiroto; Kamewari Yuki; Terada Takaho; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structures of the signal transducing protein GlnK from Thermus thermophilus HB8.
Journal of structural biology 2005;149(1):99-110.
-
2005: Pantoja-Uceda David; López-Méndez Blanca; Koshiba Seizo; Inoue Makoto; Kigawa Takanori; Terada Takaho; Shirouzu Mikako; Tanaka Akiko; Seki Motoaki; Shinozaki Kazuo; Yokoyama Shigeyuki; Güntert Peter
Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana.
Protein science : a publication of the Protein Society 2005;14(1):224-30.
-
2005: Seto Azusa; Murayama Kazutaka; Toyama Mitsutoshi; Ebihara Akio; Nakagawa Noriko; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
ATP-induced structural change of dephosphocoenzyme A kinase from Thermus thermophilus HB8.
Proteins 2005;58(1):235-42.
-
2005: Suenaga Atsushi; Takada Naoki; Hatakeyama Mariko; Ichikawa Mio; Yu Xiaomei; Tomii Kentaro; Okimoto Noriaki; Futatsugi Noriyuki; Narumi Tetsu; Shirouzu Mikako; Yokoyama Shigeyuki; Konagaya Akihiko; Taiji Makoto
Novel mechanism of interaction of p85 subunit of phosphatidylinositol 3-kinase and ErbB3 receptor-derived phosphotyrosyl peptides.
The Journal of biological chemistry 2005;280(2):1321-6.
-
2005: Takada Kazuma; Takemoto Chie; Kawazoe Masahito; Konno Takayuki; Matsuta Noriko; Kurita Daisuke; Asano Krisana; Shirouzu Mikako; Yokoyama Shigeyuki; Muto Akira; Himeno Hyouta
Functional analysis of factors involved in trans-translation.
Nucleic acids symposium series (2004) 2005;(49):101-2.
-
2004: Scott Anna; Pantoja-Uceda David; Koshiba Seizo; Inoue Makoto; Kigawa Takanori; Terada Takaho; Shirouzu Mikako; Tanaka Akiko; Sugano Sumio; Yokoyama Shigeyuki; Güntert Peter
NMR assignment of the SH2 domain from the human feline sarcoma oncogene FES.
Journal of biomolecular NMR 2004;30(4):463-4.
-
2004: Ogiso Hideo; Kagi Noriko; Matsumoto Eiko; Nishimoto Madoka; Arai Ryoichi; Shirouzu Mikako; Mimura Junsei; Fujii-Kuriyama Yoshiaki; Yokoyama Shigeyuki
Phosphorylation analysis of 90 kDa heat shock protein within the cytosolic arylhydrocarbon receptor complex.
Biochemistry 2004;43(49):15510-9.
-
2004: Nishimura Mitsuhiro; Yoshida Takuya; Shirouzu Mikako; Terada Takaho; Kuramitsu Seiki; Yokoyama Shigeyuki; Ohkubo Tadayasu; Kobayashi Yuji
Solution structure of ribosomal protein L16 from Thermus thermophilus HB8.
Journal of molecular biology 2004;344(5):1369-83.
-
2004: Yamasaki Kazuhiko; Kigawa Takanori; Inoue Makoto; Tateno Masaru; Yamasaki Tomoko; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Tomo Yasuko; Hayami Nobuhiro; Terada Takaho; Shirouzu Mikako; Osanai Takashi; Tanaka Akiko; Seki Motoaki; Shinozaki Kazuo; Yokoyama Shigeyuki
Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1.
The Plant cell 2004;16(12):3448-59.
-
2004: Kishishita Seiichiro; Tatsuguchi Ayako; Ushikoshi-Nakayama Ryoko; Terada Takaho; Kuramitsu Seiki; Park Sam-Yong; Tame Jeremy R H; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of a conserved hypothetical protein TT1751 from Thermus thermophilus HB8.
Proteins 2004;57(4):883-7.
-
2004: Kukimoto-Niino Mutsuko; Murayama Kazutaka; Kato-Murayama Miyuki; Idaka Miki; Bessho Yoshitaka; Tatsuguchi Ayako; Ushikoshi-Nakayama Ryoko; Terada Takaho; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structures of possible lysine decarboxylases from Thermus thermophilus HB8.
Protein science : a publication of the Protein Society 2004;13(11):3038-42.
-
2004: Wang Hongfei; Takemoto Chie Hori; Murayama Kazutaka; Sakai Hiroaki; Tatsuguchi Ayako; Terada Takaho; Shirouzu Mikako; Kuramitsu Seiki; Yokoyama Shigeyuki
Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8.
Protein science : a publication of the Protein Society 2004;13(10):2806-10.
-
2004: Saito Kohei; Kigawa Takanori; Koshiba Seizo; Sato Kazuo; Matsuo Yo; Sakamoto Ayako; Takagi Tetsuo; Shirouzu Mikako; Yabuki Takashi; Nunokawa Emi; Seki Eiko; Matsuda Takayoshi; Aoki Masaaki; Miyata Yukako; Hirakawa Noriko; Inoue Makoto; Terada Takaho; Nagase Takahiro; Kikuno Reiko; Nakayama Manabu; Ohara Osamu; Tanaka Akiko; Yokoyama Shigeyuki
The CAP-Gly domain of CYLD associates with the proline-rich sequence in NEMO/IKKgamma.
Structure (London, England : 1993) 2004;12(9):1719-28.
-
2004: Nameki Nobukazu; Yoneyama Misao; Koshiba Seizo; Tochio Naoya; Inoue Makoto; Seki Eiko; Matsuda Takayoshi; Tomo Yasuko; Harada Takushi; Saito Kohei; Kobayashi Naohiro; Yabuki Takashi; Aoki Masaaki; Nunokawa Emi; Matsuda Natsuko; Sakagami Noriko; Terada Takaho; Shirouzu Mikako; Yoshida Mayumi; Hirota Hiroshi; Osanai Takashi; Tanaka Akiko; Arakawa Takahiro; Carninci Piero; Kawai Jun; Hayashizaki Yoshihide; Kinoshita Kengo; Güntert Peter; Kigawa Takanori; Yokoyama Shigeyuki
Solution structure of the RWD domain of the mouse GCN2 protein.
Protein science : a publication of the Protein Society 2004;13(8):2089-100.
-
2004: Reay Paul; Yamasaki Kazuhiko; Terada Takaho; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Structural and sequence comparisons arising from the solution structure of the transcription elongation factor NusG from Thermus thermophilus.
Proteins 2004;56(1):40-51.
-
2004: Hanawa-Suetsugu Kyoko; Sekine Shun-ichi; Sakai Hiroaki; Hori-Takemoto Chie; Terada Takaho; Unzai Satoru; Tame Jeremy R H; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of elongation factor P from Thermus thermophilus HB8.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(26):9595-600.
-
2004: Hatakeyama M; Yumoto N; Yu X; Shirouzu M; Yokoyama S; Konagaya A
Transformation potency of ErbB heterodimer signaling is determined by B-Raf kinase.
Oncogene 2004;23(29):5023-31.
-
2004: Pantoja-Uceda David; López-Méndez Blanca; Koshiba Seizo; Kigawa Takanori; Shirouzu Mikako; Terada Takaho; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Hirota Hiroshi; Yoshida Mayumi; Tanaka Akiko; Osanai Takashi; Seki Motoaki; Shinozaki Kazuo; Yokoyama Shigeyuki; Güntert Peter
NMR assignment of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana.
Journal of biomolecular NMR 2004;29(2):207-8.
-
2004: López-Méndez Blanca; Pantoja-Uceda David; Tomizawa Tadashi; Koshiba Seizo; Kigawa Takanori; Shirouzu Mikako; Terada Takaho; Inoue Makoto; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Hirota Hiroshi; Yoshida Mayumi; Tanaka Akiko; Osanai Takashi; Seki Motoaki; Shinozaki Kazuo; Yokoyama Shigeyuki; Güntert Peter
NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana.
Journal of biomolecular NMR 2004;29(2):205-6.
-
2004: Wada Takashi; Shirouzu Mikako; Terada Takaho; Kamewari Yuki; Park Sam-Yong; Tame Jeremy R H; Kuramitsu Seiki; Yokoyama Shigeyuki
Crystal structure of the conserved hypothetical protein TT1380 from Thermus thermophilus HB8.
Proteins 2004;55(3):778-80.
-
2004: Katsura Yasuhiro; Shirouzu Mikako; Yamaguchi Hiroto; Ishitani Ryuichiro; Nureki Osamu; Kuramitsu Seiki; Hayashi Hideyuki; Yokoyama Shigeyuki
Crystal structure of a putative aspartate aminotransferase belonging to subgroup IV.
Proteins 2004;55(3):487-92.
-
2004: Hosaka T; Tamehiro N; Chumpolkulwong N; Hori-Takemoto C; Shirouzu M; Yokoyama S; Ochi K
The novel mutation K87E in ribosomal protein S12 enhances protein synthesis activity during the late growth phase in Escherichia coli.
Molecular genetics and genomics : MGG 2004;271(3):317-24.
-
2004: Kukimoto-Niino Mutsuko; Murayama Kazutaka; Inoue Mio; Terada Takaho; Tame Jeremy R H; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the GTP-binding protein Obg from Thermus thermophilus HB8.
Journal of molecular biology 2004;337(3):761-70.
-
2004: Chumpolkulwong Namthip; Hori-Takemoto Chie; Hosaka Takeshi; Inaoka Takashi; Kigawa Takanori; Shirouzu Mikako; Ochi Kozo; Yokoyama Shigeyuki
Effects of Escherichia coli ribosomal protein S12 mutations on cell-free protein synthesis.
European journal of biochemistry / FEBS 2004;271(6):1127-34.
-
2004: Yamasaki Kazuhiko; Kigawa Takanori; Inoue Makoto; Tateno Masaru; Yamasaki Tomoko; Yabuki Takashi; Aoki Masaaki; Seki Eiko; Matsuda Takayoshi; Nunokawa Emi; Ishizuka Yoshiko; Terada Takaho; Shirouzu Mikako; Osanai Takashi; Tanaka Akiko; Seki Motoaki; Shinozaki Kazuo; Yokoyama Shigeyuki
A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors.
Journal of molecular biology 2004;337(1):49-63.
-
2004: Maeda Takeshi; Inoue Makoto; Koshiba Seizo; Yabuki Takashi; Aoki Masaaki; Nunokawa Emi; Seki Eiko; Matsuda Takayoshi; Motoda Yoko; Kobayashi Atsuo; Hiroyasu Fumiko; Shirouzu Mikako; Terada Takaho; Hayami Nobuhiro; Ishizuka Yoshiko; Shinya Naoko; Tatsuguchi Ayako; Yoshida Mayumi; Hirota Hiroshi; Matsuo Yo; Tani Kazutoshi; Arakawa Takahiro; Carninci Piero; Kawai Jun; Hayashizaki Yoshihide; Kigawa Takanori; Yokoyama Shigeyuki
Solution structure of the SEA domain from the murine homologue of ovarian cancer antigen CA125 (MUC16).
The Journal of biological chemistry 2004;279(13):13174-82.
-
2004: Kasai Takuma; Inoue Makoto; Koshiba Seizo; Yabuki Takashi; Aoki Masaaki; Nunokawa Emi; Seki Eiko; Matsuda Takayoshi; Matsuda Natsuko; Tomo Yasuko; Shirouzu Mikako; Terada Takaho; Obayashi Naomi; Hamana Hiroaki; Shinya Naoko; Tatsuguchi Ayako; Yasuda Satoko; Yoshida Mayumi; Hirota Hiroshi; Matsuo Yo; Tani Kazutoshi; Suzuki Harukazu; Arakawa Takahiro; Carninci Piero; Kawai Jun; Hayashizaki Yoshihide; Kigawa Takanori; Yokoyama Shigeyuki
Solution structure of a BolA-like protein from Mus musculus.
Protein science : a publication of the Protein Society 2004;13(2):545-8.
-
2003: Seto Azusa; Shirouzu Mikako; Terada Takaho; Murayama Kazutaka; Kuramitsu Seiki; Yokoyama Shigeyuki
Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7 A resolution.
Proteins 2003;53(3):768-71.
-
2003: Sakai Hiroaki; Vassylyeva Marina N; Matsuura Takanori; Sekine Shun ichi; Gotoh Kazumi; Nishiyama Makoto; Terada Takaho; Shirouzu Mikako; Kuramitsu Seiki; Vassylyev Dmitry G; Yokoyama Shigeyuki
Crystal structure of a lysine biosynthesis enzyme, LysX, from Thermus thermophilus HB8.
Journal of molecular biology 2003;332(3):729-40.
-
2003: Vassylyeva Marina N; Sakai Hiroaki; Matsuura Takanori; Sekine Shun-ichi; Nishiyama Makoto; Terada Takaho; Shirouzu Mikako; Kuramitsu Seiki; Vassylyev Dmitry G; Yokoyama Shigeyuki
Cloning, expression, purification, crystallization and initial crystallographic analysis of the lysine-biosynthesis LysX protein from Thermus thermophilus HB8.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 9):1651-2.
-
2003: Handa Noriko; Terada Takaho; Kamewari Yuki; Hamana Hiroaki; Tame Jeremy R H; Park Sam-Yong; Kinoshita Kengo; Ota Motonori; Nakamura Haruki; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8.
Protein science : a publication of the Protein Society 2003;12(8):1621-32.
-
2003: Wada Takashi; Shirouzu Mikako; Terada Takaho; Ishizuka Yoshiko; Matsuda Takayoshi; Kigawa Takanori; Kuramitsu Seiki; Park Sam Yong; Tame Jeremy R H; Yokoyama Shigeyuki
Structure of a conserved CoA-binding protein synthesized by a cell-free system.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 7):1213-8.
-
2003: Hatakeyama Mariko; Kimura Shuhei; Naka Takashi; Kawasaki Takuji; Yumoto Noriko; Ichikawa Mio; Kim Jae-Hoon; Saito Kazuki; Saeki Mihoro; Shirouzu Mikako; Yokoyama Shigeyuki; Konagaya Akihiko
A computational model on the modulation of mitogen-activated protein kinase (MAPK) and Akt pathways in heregulin-induced ErbB signalling.
The Biochemical journal 2003;373(Pt 2):451-63.
-
2003: Kato Miyuki; Shirouzu Mikako; Terada Takaho; Yamaguchi Hiroto; Murayama Kazutaka; Sakai Hiroaki; Kuramitsu Seiki; Yokoyama Shigeyuki
Crystal structure of the 2'-5' RNA ligase from Thermus thermophilus HB8.
Journal of molecular biology 2003;329(5):903-11.
-
2003: Kaminishi Tatsuya; Sakai Hiroaki; Takemoto-Hori Chie; Terada Takaho; Nakagawa Noriko; Maoka Nobuko; Kuramitsu Seiki; Shirouzu Mikako; Yokoyama Shigeyuki
Crystallization and preliminary X-ray diffraction analysis of ribosomal protein L11 methyltransferase from Thermus thermophilus HB8.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 5):930-2.
-
2003: Suenaga Atsushi; Hatakeyama Mariko; Ichikawa Mio; Yu Xiaomei; Futatsugi Noriyuki; Narumi Tetsu; Fukui Kazuhiko; Terada Takaho; Taiji Makoto; Shirouzu Mikako; Yokoyama Shigeyuki; Konagaya Akihiko
Molecular dynamics, free energy, and SPR analyses of the interactions between the SH2 domain of Grb2 and ErbB phosphotyrosyl peptides.
Biochemistry 2003;42(18):5195-200.
-
2003: Fujikawa Norie; Kurumizaka Hitoshi; Nureki Osamu; Terada Takaho; Shirouzu Mikako; Katayama Tsutomu; Yokoyama Shigeyuki
Structural basis of replication origin recognition by the DnaA protein.
Nucleic acids research 2003;31(8):2077-86.
-
2003: Someya Tatsuhiko; Nameki Nobukazu; Hosoi Haruko; Suzuki Sakura; Hatanaka Hideki; Fujii Michiko; Terada Takaho; Shirouzu Mikako; Inoue Yorinao; Shibata Takehiko; Kuramitsu Seiki; Yokoyama Shigeyuki; Kawai Gota
Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus.
FEBS letters 2003;535(1-3):94-100.
-
2003: Kishida Hiroyuki; Wada Takashi; Unzai Satoru; Kuzuyama Tomohisa; Takagi Motoki; Terada Takaho; Shirouzu Mikako; Yokoyama Shigeyuki; Tame Jeremy R H; Park Sam-Yong
Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 1):23-31.
-
2003: Endo Makoto; Shirouzu Mikako; Yokoyama Shigeyuki
The Cdc42 binding and scaffolding activities of the fission yeast adaptor protein Scd2.
The Journal of biological chemistry 2003;278(2):843-52.
-
2003: Takada Kazuma; Hori-Takemoto Chie; Kawazoe Masahito; Lee SungGa; Shirouzu Mikako; Yokoyama Shigeyuki; Muto Akira; Himeno Hyouta
In vitro analysis of the initial steps of trans-translation.
Nucleic acids research. Supplement (2001) 2003;(3):287-8.
-
2002: Sakamoto Kensaku; Hayashi Akiko; Sakamoto Ayako; Kiga Daisuke; Nakayama Hiroshi; Soma Akiko; Kobayashi Takatsugu; Kitabatake Makoto; Takio Koji; Saito Kazuki; Shirouzu Mikako; Hirao Ichiro; Yokoyama Shigeyuki
Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells.
Nucleic acids research 2002;30(21):4692-9.
-
2002: Ogiso Hideo; Ishitani Ryuichiro; Nureki Osamu; Fukai Shuya; Yamanaka Mari; Kim Jae-Hoon; Saito Kazuki; Sakamoto Ayako; Inoue Mio; Shirouzu Mikako; Yokoyama Shigeyuki
Crystal structure of the complex of human epidermal growth factor and receptor extracellular domains.
Cell 2002;110(6):775-87.
-
2002: Kiga Daisuke; Sakamoto Kensaku; Kodama Koichiro; Kigawa Takanori; Matsuda Takayoshi; Yabuki Takashi; Shirouzu Mikako; Harada Yoko; Nakayama Hiroshi; Takio Koji; Hasegawa Yoshinori; Endo Yaeta; Hirao Ichiro; Yokoyama Shigeyuki
An engineered Escherichia coli tyrosyl-tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(15):9715-20.
-
2002: Nureki Osamu; Shirouzu Mikako; Hashimoto Kyoko; Ishitani Ryuichiro; Terada Takaho; Tamakoshi Masatada; Oshima Tairo; Chijimatsu Masao; Takio Koji; Vassylyev Dmitry G; Shibata Takehiko; Inoue Yorinao; Kuramitsu Seiki; Yokoyama Shigeyuki
An enzyme with a deep trefoil knot for the active-site architecture.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 7):1129-37.
-
2002: Kimoto Michiko; Shirouzu Mikako; Mizutani Shin; Koide Hiroshi; Kaziro Yoshito; Hirao Ichiro; Yokoyama Shigeyuki
Anti-(Raf-1) RNA aptamers that inhibit Ras-induced Raf-1 activation.
European journal of biochemistry / FEBS 2002;269(2):697-704.
-
2001: Terada T; Shirouzu M; Fukumori Y; Fujimori F; Ito Y; Kigawa T; Yokoyama S; Uchida T
Solution structure of the human parvulin-like peptidyl prolyl cis/trans isomerase, hPar14.
Journal of molecular biology 2001;305(4):917-26.
-
2001: Nureki O; Fukai S; Sekine S; Shimada A; Terada T; Nakama T; Shirouzu M; Vassylyev D G; Yokoyama S
Structural basis for amino acid and tRNA recognition by class I aminoacyl-tRNA synthetases.
Cold Spring Harbor symposia on quantitative biology 2001;66():167-73.
-
1999: Terada T; Ito Y; Shirouzu M; Tateno M; Hashimoto K; Kigawa T; Ebisuzaki T; Takio K; Shibata T; Yokoyama S; Smith B O; Laue E D; Cooper J A
Nuclear magnetic resonance and molecular dynamics studies on the interactions of the Ras-binding domain of Raf-1 with wild-type and mutant Ras proteins.
Journal of molecular biology 1999;286(1):219-32.
-
1998: Kigawa T; Endo M; Ito Y; Shirouzu M; Kikuchi A; Yokoyama S
Solution structure of the Ras-binding domain of RGL.
FEBS letters 1998;441(3):413-8.
-
1998: Kimoto M; Sakamoto K; Shirouzu M; Hirao I; Yokoyama S
RNA aptamers that specifically bind to the Ras-binding domain of Raf-1.
FEBS letters 1998;441(2):322-6.
-
1998: Kim J H; Shirouzu M; Kataoka T; Bowtell D; Yokoyama S
Activation of Ras and its downstream extracellular signal-regulated protein kinases by the CDC25 homology domain of mouse Son-of-sevenless 1 (mSos1).
Oncogene 1998;16(20):2597-607.
-
1997: Kinoshita T; Shirouzu M; Kamiya A; Hashimoto K; Yokoyama S; Miyajima A
Raf/MAPK and rapamycin-sensitive pathways mediate the anti-apoptotic function of p21Ras in IL-3-dependent hematopoietic cells.
Oncogene 1997;15(6):619-27.
-
1997: Ito Y; Yamasaki K; Iwahara J; Terada T; Kamiya A; Shirouzu M; Muto Y; Kawai G; Yokoyama S; Laue E D; Wälchli M; Shibata T; Nishimura S; Miyazawa T
Regional polysterism in the GTP-bound form of the human c-Ha-Ras protein.
Biochemistry 1997;36(30):9109-19.
-
1997: Koshiba S; Kigawa T; Kim J H; Shirouzu M; Bowtell D; Yokoyama S
The solution structure of the pleckstrin homology domain of mouse Son-of-sevenless 1 (mSos1).
Journal of molecular biology 1997;269(4):579-91.
-
1995: Fujita-Yoshigaki J; Shirouzu M; Ito Y; Hattori S; Furuyama S; Nishimura S; Yokoyama S
A constitutive effector region on the C-terminal side of switch I of the Ras protein.
The Journal of biological chemistry 1995;270(9):4661-7.
-
1995: Yamamoto-Honda R; Tobe K; Kaburagi Y; Ueki K; Asai S; Yachi M; Shirouzu M; Yodoi J; Akanuma Y; Yokoyama S
Upstream mechanisms of glycogen synthase activation by insulin and insulin-like growth factor-I. Glycogen synthase activation is antagonized by wortmannin or LY294002 but not by rapamycin or by inhibiting p21ras.
The Journal of biological chemistry 1995;270(6):2729-34.
-
1994: Shirouzu M; Koide H; Fujita-Yoshigaki J; Oshio H; Toyama Y; Yamasaki K; Fuhrman S A; Villafranca E; Kaziro Y; Yokoyama S
Mutations that abolish the ability of Ha-Ras to associate with Raf-1.
Oncogene 1994;9(8):2153-7.
-
1994: Yamasaki K; Shirouzu M; Muto Y; Fujita-Yoshigaki J; Koide H; Ito Y; Kawai G; Hattori S; Yokoyama S; Nishimura S
Site-directed mutagenesis, fluorescence, and two-dimensional NMR studies on microenvironments of effector region aromatic residues of human c-Ha-Ras protein.
Biochemistry 1994;33(1):65-73.
-
1993: Hiwasa T; Fujita-Yoshigaki J; Shirouzu M; Koide H; Sawada T; Sakiyama S; Yokoyama S
c-Ha-Ras mutants with point mutations in Gln-Val-Val region have reduced inhibitory activity toward cathepsin B.
Cancer letters 1993;69(3):161-5.
-
1992: Shirouzu M; Fujita-Yoshigaki J; Ito Y; Koide H; Nishimura S; Yokoyama S
A glutamic acid residue at position 31 of Ras protein is essential to the signal transduction for neurite outgrowth of PC12 cells and the stimulation of GTPase activity by GAPRas.
Oncogene 1992;7(3):475-80.
-
1991: Fujita-Yoshigaki J; Shirouzu M; Koide H; Nishimura S; Yokoyama S
Identification of amino acid residues of Ras protein that are essential for signal-transducing activity but not for enhancement of GTPase activity by GAP.
FEBS letters 1991;294(3):187-90.
Sign-in to see more
