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Peter Simmonds

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TOP 3
Donald B Smith; Michael A Purdy; Peter Simmonds
Genetic variability and the classification of hepatitis E virus.
Donald B Smith; Jeff Vanek; Louise Wellington; Ingolfur Johannessen; Sandeep Ramalingam; Peter Simmonds
Hepatitis e virus mixed infection in immunocompetent patient.
Peter Simmonds
The origin of hepatitis C virus.

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All Publications

2013: Donald B Smith; Michael A Purdy; Peter Simmonds
Genetic variability and the classification of hepatitis E virus.
Journal of virology 2013;87(8):4161-9.
2013: Donald B Smith; Jeff Vanek; Louise Wellington; Ingolfur Johannessen; Sandeep Ramalingam; Peter Simmonds
Hepatitis e virus mixed infection in immunocompetent patient.
Emerging infectious diseases 2013;19(3):468-70.
2013: Peter Simmonds
The origin of hepatitis C virus.
Current topics in microbiology and immunology 2013;369():1-15.
2012: G McAllister; Peter Simmonds; F Cameron; J A Cepeda; K Cloy; J Danial; L Garcia; A Holmes; K E Templeton
Molecular epidemiology of norovirus in Edinburgh healthcare facilities, Scotland 2007-2011.
Epidemiology and infection 2012;140(12):2273-81.
2012: Donald B Smith; Kate Templeton; Jeff Vanek; Ingolfur Johannessen; Sandeep Ramalingam; Peter Simmonds
Evolution of the hepatitis E virus hypervariable region.
The Journal of general virology 2012;93(Pt 11):2408-18.
2012: Nigel J McLeish; E Carol McWilliam Leitch; Peter Muir; Riikka Osterback; Kate E Templeton; Barry Vipond; Matti Waris; Jeroen Witteveldt; Katja C Wolthers; Susan Bennett; Kimberley Benschop; William F Carman; Lucy Clasper; Peter V Coyle; Susan A Feeney; Rory Gunson; Alison Hardie; Heli Harvala; Ingo Johannessen; Chloe McIntyre; Peter Simmonds
Development and assay of RNA transcripts of enterovirus species A to D, rhinovirus species a to C, and human parechovirus: assessment of assay sensitivity and specificity of real-time screening and typing methods.
Journal of clinical microbiology 2012;50(9):2910-7.
2012: Heli Harvala; Sharon Labonte; Chloe McIntyre; Richard Othieno; Huw Roddie; Peter Simmonds; Evonne Curran; Eleanor Gaunt; John Bremner
Epidemiology and clinical characteristics of parainfluenza virus 3 outbreak in a Haemato-oncology unit.
The Journal of infection 2012;65(3):246-54.
2012: Andrew Tuplin; Peter Simmonds; Madeleine Struthers; David J Evans
A twist in the tail: SHAPE mapping of long-range interactions and structural rearrangements of RNA elements involved in HCV replication.
Nucleic acids research 2012;40(14):6908-21.
2012: Colin P Sharp; Sharyne Donfield; Edward D Gomperts; Alice Lail; Peter Simmonds
Virologic and clinical features of primary infection with human parvovirus 4 in subjects with hemophilia: frequent transmission by virally inactivated clotting factor concentrates.
Transfusion 2012;52(7):1482-9.
2012: Samantha Lycett; Nigel J McLeish; James McMenamin; Andrew Rambaut; Christopher Robertson; Peter Simmonds; Mark Woolhouse; Gregory Baillie; William Carman; Andrew J Leigh Brown
Origin and fate of A/H1N1 influenza in Scotland during 2009.
The Journal of general virology 2012;93(Pt 6):1253-60.
2012: H Harvala; J Kondracka; C L McIntyre; N J McLeish; P Molyneaux; J Palmer; S Bennett; R Gunson; Kate E Templeton; Peter Simmonds
High detection frequency and viral loads of human rhinovirus species A to C in fecal samples; diagnostic and clinical implications.
Journal of medical virology 2012;84(3):536-42.
2012: E Carol McWilliam Leitch; D Perera; M Roivainen; P Susi; Gloria Trallero; M Cabrerizo; J Cardosa; David J Evans; H Harvala; O E Ivanova; S Koike; A C M Kroes; Alexander Lukashev; Peter Simmonds
The association of recombination events in the founding and emergence of subgenogroup evolutionary lineages of human enterovirus 71.
Journal of virology 2012;86(5):2676-85.
2012: Donald B Smith; Richard J Blundell; Nora McFadden; Anna Meredith; Peter Simmonds
Diversity of murine norovirus in wild-rodent populations: species-specific associations suggest an ancient divergence.
The Journal of general virology 2012;93(Pt 2):259-66.
2012: Sinéad Lyons; Colin Sharp; Ubald Tamoufé; Nathan D Wolfe; Tafon G Bibila; Cyrille F Djoko; Joseph Fair; John A Kiyang; Felix Lankester; Matthew LeBreton; Peter Simmonds
Species association of hepatitis B virus (HBV) in non-human apes; evidence for recombination between gorilla and chimpanzee variants.
PloS one 2012;7(3):e33430.
2012: Peter Simmonds
SSE: a nucleotide and amino acid sequence analysis platform.
BMC research notes 2012;5():50.
2011: Paul M Sharp; Peter Simmonds
Evaluating the evidence for virus/host co-evolution.
Current opinion in virology 2011;1(5):436-41.
2011: Peter Simmonds; Esteban Domingo
Virus evolution.
Current opinion in virology 2011;1(5):410-2.
2011: Susan Bennett; William F Carman; Rory Gunson; Heli Harvala; Nigel McLeish; E Carol McWilliam Leitch; Kate E Templeton; Jeroen Witteveldt; Peter Simmonds
Rapid simultaneous detection of enterovirus and parechovirus RNAs in clinical samples by one-step real-time reverse transcription-PCR assay.
Journal of clinical microbiology 2011;49(7):2620-4.
2011: Heli Harvala; Nigel McLeish; Jasmina Kondracka; Chloe L McIntyre; E Carol McWilliam Leitch; Kate E Templeton; Peter Simmonds
Comparison of human parechovirus and enterovirus detection frequencies in cerebrospinal fluid samples collected over a 5-year period in edinburgh: HPeV type 3 identified as the most common picornavirus type.
Journal of medical virology 2011;83(5):889-96.
2011: Heli Harvala; Colin P Sharp; Eitel Mpoudi Ngole; Eric Delaporte; Martine Peeters; Peter Simmonds
Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: relationship with human and simian enteroviruses.
Journal of virology 2011;85(9):4480-6.
2011: Ingrid Imhof; Peter Simmonds
Genotype differences in susceptibility and resistance development of hepatitis C virus to protease inhibitors telaprevir (VX-950) and danoprevir (ITMN-191).
Hepatology (Baltimore, Md.) 2011;53(4):1090-9.
2011: Ricky W C Siu; Rennos Fragkoudis; Peter Simmonds; Claire L Donald; Margo E Chase-Topping; Gerald Barry; Ghassem Attarzadeh-Yazdi; Julio Rodriguez-Andres; Anthony A Nash; Andres Merits; John Fazakerley; Alain Kohl
Antiviral RNA interference responses induced by Semliki Forest virus infection of mosquito cells: characterization, origin, and frequency-dependent functions of virus-derived small interfering RNAs.
Journal of virology 2011;85(6):2907-17.
2011: Nigel J McLeish; James McMenamin; David J Porteous; Chris Robertson; Peter Simmonds; Brajendra K Singh; Katy Sinka; Mark Bronsvoort; William Carman; Margo E Chase-Topping; Ian Handel; Shona Kerr; Andrew Leigh-Brown; Mark McGilchrist; M E J Woolhouse
Sero-prevalence and incidence of A/H1N1 2009 influenza infection in Scotland in winter 2009-2010.
PloS one 2011;6(6):e20358.
2011: Eleanor R Gaunt; Rogier R Jansen; yong poovorawan; Kate E Templeton; Geoffrey L Toms; Peter Simmonds
Molecular epidemiology and evolution of human respiratory syncytial virus and human metapneumovirus.
PloS one 2011;6(3):e17427.
2010: Colin P Sharp; Marion Vermeulen; Yacouba Nébié; Cyrille F Djoko; Matthew LeBreton; Ubald Tamoufe; Anne W Rimoin; Patrick K Kayembe; Jean K Carr; Annabelle Servant-Delmas; Syria Laperche; G L Abby Harrison; Oliver G Pybus; Eric Delwart; Nathan D Wolfe; Andrew Saville; Jean Jacques Lefrère; Peter Simmonds
Changing epidemiology of human parvovirus 4 infection in sub-Saharan Africa.
Emerging infectious diseases 2010;16(10):1605-7.
2010: Chloe L McIntyre; E Carol McWilliam Leitch; Carita Savolainen-Kopra; Tapani Hovi; Peter Simmonds
Analysis of genetic diversity and sites of recombination in human rhinovirus species C.
Journal of virology 2010;84(19):10297-310.
2010: Colin P Sharp; Matthew LeBreton; Kalle Kantola; Ahmadou Nana; Joseph Le Doux Diffo; Cyrille F Djoko; Ubald Tamoufe; John A Kiyang; Tafon G Babila; Eitel Mpoudi Ngole; Oliver G Pybus; Eric Delwart; Eric Delaporte; Martine Peeters; Maria Soderlund-Venermo; Klaus Hedman; Nathan D Wolfe; Peter Simmonds
Widespread infection with homologues of human parvoviruses B19, PARV4, and human bocavirus of chimpanzees and gorillas in the wild.
Journal of virology 2010;84(19):10289-96.
2010: Peter Simmonds; Chloe McIntyre; Carita Savolainen-Kopra; Caroline Tapparel; Ian M Mackay; Tapani Hovi
Proposals for the classification of human rhinovirus species C into genotypically assigned types.
The Journal of general virology 2010;91(Pt 10):2409-19.
2010: E Carol McWilliam Leitch; M Cabrerizo; J Cardosa; H Harvala; O E Ivanova; A C M Kroes; Alexander Lukashev; P Muir; J Odoom; M Roivainen; P Susi; G Trallero; David J Evans; Peter Simmonds
Evolutionary dynamics and temporal/geographical correlates of recombination in the human enterovirus echovirus types 9, 11, and 30.
Journal of virology 2010;84(18):9292-300.
2010: E R Gaunt; A Hardie; Eric C J Claas; Peter Simmonds; Kate E Templeton
Epidemiology and clinical presentations of the four human coronaviruses 229E, HKU1, NL63, and OC43 detected over 3 years using a novel multiplex real-time PCR method.
Journal of clinical microbiology 2010;48(8):2940-7.
2010: Ingrid Imhof; Peter Simmonds
Development of an intergenotypic hepatitis C virus (HCV) cell culture method to assess antiviral susceptibilities and resistance development of HCV NS3 protease genes from HCV genotypes 1 to 6.
Journal of virology 2010;84(9):4597-610.
2010: J Calvert; T Chieochansin; K S Benschop; E C McWilliam Leitch; J F Drexler; K Grywna; H da Costa Ribeiro; C Drosten; H Harvala; Y Poovorawan; K C Wolthers; Peter Simmonds
Recombination dynamics of human parechoviruses: investigation of type-specific differences in frequency and epidemiological correlates.
The Journal of general virology 2010;91(Pt 5):1229-38.
2010: Dalan Bailey; Ioannis Karakasiliotis; Surender Vashist; Liliane Man Wah Chung; Jivan Rees; Jivan Reese; Nora McFadden; Alicia Benson; Felix Yarovinsky; Peter Simmonds; Ian G Goodfellow
Functional analysis of RNA structures present at the 3' extremity of the murine norovirus genome: the variable polypyrimidine tract plays a role in viral virulence.
Journal of virology 2010;84(6):2859-70.
2010: H Harvala; R Gunson; Peter Simmonds; A Hardie; S Bennett; F Scott; H Roddie; J McKnight; T Walsh; D Rowney; A Clark; J Bremner; C Aitken; Kate E Templeton
The emergence of oseltamivir-resistant pandemic influenza A (H1N1) 2009 virus amongst hospitalised immunocompromised patients in Scotland, November-December, 2009.
Euro surveillance : bulletin Européen sur les maladies transmissibles = European communicable disease bulletin 2010;15(14):.
2010: Kimberley Benschop; M de Vries; R P Minnaar; G Stanway; Lia van der Hoek; Katja C Wolthers; Peter Simmonds
Comprehensive full-length sequence analyses of human parechoviruses: diversity and recombination.
The Journal of general virology 2010;91(Pt 1):145-54.
2009: A Wisdom; E C McWilliam Leitch; E Gaunt; H Harvala; Peter Simmonds
Screening respiratory samples for detection of human rhinoviruses (HRVs) and enteroviruses: comprehensive VP4-VP2 typing reveals high incidence and genetic diversity of HRV species C.
Journal of clinical microbiology 2009;47(12):3958-67.
2009: Eleanor Gaunt; E Carol McWilliam Leitch; Kate Templeton; Peter Simmonds
Incidence, molecular epidemiology and clinical presentations of human metapneumovirus; assessment of its importance as a diagnostic screening target.
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2009;46(4):318-24.
2009: Colin P Sharp; Alice Lail; Sharyne Donfield; Ruth Simmons; Clifford Leen; Paul Klenerman; Eric Delwart; Edward D Gomperts; Peter Simmonds
High frequencies of exposure to the novel human parvovirus PARV4 in hemophiliacs and injection drug users, as detected by a serological assay for PARV4 antibodies.
The Journal of infectious diseases 2009;200(7):1119-25.
2009: H Harvala; I Robertson; Thaweesak Chieochansin; E C McWilliam Leitch; Kate E Templeton; Peter Simmonds
Specific association of human parechovirus type 3 with sepsis and fever in young infants, as identified by direct typing of cerebrospinal fluid samples.
The Journal of infectious diseases 2009;199(12):1753-60.
2009: H Harvala; Peter Simmonds
Human parechoviruses: biology, epidemiology and clinical significance.
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2009;45(1):1-9.
2009: E C McWilliam Leitch; J Bendig; M Cabrerizo; J Cardosa; T Hyypiä; O E Ivanova; A Kelly; A C M Kroes; Alexander Lukashev; A MacAdam; P McMinn; M Roivainen; G Trallero; David J Evans; Peter Simmonds
Transmission networks and population turnover of echovirus 30.
Journal of virology 2009;83(5):2109-18.
2009: E C McWilliam Leitch; H Harvala; I Robertson; I Ubillos; K Templeton; Peter Simmonds
Direct identification of human enterovirus serotypes in cerebrospinal fluid by amplification and sequencing of the VP1 region.
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2009;44(2):119-24.
2009: Colin P Sharp; Päivi Norja; Iain Anthony; Jeanne E Bell; Peter Simmonds
Reactivation and mutation of newly discovered WU, KI, and Merkel cell carcinoma polyomaviruses in immunosuppressed individuals.
The Journal of infectious diseases 2009;199(3):398-404.
2009: Anne Wisdom; Aldona E Kutkowska; E Carol McWilliam Leitch; Eleanor Gaunt; Kate Templeton; Heli Harvala; Peter Simmonds
Genetics, recombination and clinical features of human rhinovirus species C (HRV-C) infections; interactions of HRV-C with other respiratory viruses.
PloS one 2009;4(12):e8518.
2009: Carla Kuiken; Peter Simmonds
Nomenclature and numbering of the hepatitis C virus.
Methods in molecular biology (Clifton, N.J.) 2009;510():33-53.
2008: Matthew Davis; Selena M Sagan; John P Pezacki; David J Evans; Peter Simmonds
Bioinformatic and physical characterizations of genome-scale ordered RNA structure in mammalian RNA viruses.
Journal of virology 2008;82(23):11824-36.
2008: H Harvala; I Robertson; E C McWilliam Leitch; Kimberley Benschop; Katja C Wolthers; Kate E Templeton; Peter Simmonds
Epidemiology and clinical associations of human parechovirus respiratory infections.
Journal of clinical microbiology 2008;46(10):3446-53.
2008: Peter Simmonds; Jill Douglas; Giovanna Bestetti; Erika Longhi; Spinello Antinori; Carlo Parravicini; Mario Corbellino
A third genotype of the human parvovirus PARV4 in sub-Saharan Africa.
The Journal of general virology 2008;89(Pt 9):2299-302.
2008: Sinéad Diviney; Andrew Tuplin; Madeleine Struthers; Victoria Armstrong; Richard M Elliott; Peter Simmonds; David J Evans
A hepatitis C virus cis-acting replication element forms a long-range RNA-RNA interaction with upstream RNA sequences in NS5B.
Journal of virology 2008;82(18):9008-22.
2008: Päivi Norja; Anna Maria Eis-Hübinger; Maria Söderlund-Venermo; Klaus Hedman; Peter Simmonds
Rapid sequence change and geographical spread of human parvovirus B19: comparison of B19 virus evolution in acute and persistent infections.
Journal of virology 2008;82(13):6427-33.
2008: Peter Simmonds; Ioannis Karakasiliotis; Dalan Bailey; Yasmin Chaudhry; David J Evans; Ian G Goodfellow
Bioinformatic and functional analysis of RNA secondary structure elements among different genera of human and animal caliciviruses.
Nucleic acids research 2008;36(8):2530-46.
2008: Gareth Hughes; Alexandra Cochrane; Clifford Leen; Sheila Morris; Jeanne E Bell; Peter Simmonds
HIV-1-infected CD8+CD4+ T cells decay in vivo at a similar rate to infected CD4 T cells during HAART.
AIDS (London, England) 2008;22(1):57-65.
2008: Iain Crawford Anthony; Juan Arango; Ben Stephens; Peter Simmonds; Jeanne Elisabeth Bell
The effects of illicit drugs on the HIV infected brain.
Frontiers in bioscience : a journal and virtual library 2008;13():1294-307.
2007: Peter Simmonds; Ashleigh Manning; Rachel Kenneil; Frances W Carnie; Jeanne E Bell
Parenteral transmission of the novel human parvovirus PARV4.
Emerging infectious diseases 2007;13(9):1386-8.
2007: Gareth Hughes; Samantha J Willey; Alexandra Cochrane; Clifford Leen; Jeanne E Bell; Peter Simmonds
Virus immunocapture provides evidence of CD8 lymphocyte-derived HIV-1 in vivo.
AIDS (London, England) 2007;21(12):1507-13.
2007: Ashleigh Manning; Samantha J Willey; Jeanne E Bell; Peter Simmonds
Comparison of tissue distribution, persistence, and molecular epidemiology of parvovirus B19 and novel human parvoviruses PARV4 and human bocavirus.
The Journal of infectious diseases 2007;195(9):1345-52.
2006: Jon Welch; Carol Bienek; Edward D Gomperts; Peter Simmonds
Resistance of porcine circovirus and chicken anemia virus to virus inactivation procedures used for blood products.
Transfusion 2006;46(11):1951-8.
2006: Carla Kuiken; Christophe Combet; Jens Bukh; Tadasu Shin-i; Gilbert Deleage; Masashi Mizokami; Russell Richardson; Erwin Sablon; Karina Yusim; Jean-Michel Pawlotsky; Peter Simmonds
A comprehensive system for consistent numbering of HCV sequences, proteins and epitopes.
Hepatology (Baltimore, Md.) 2006;44(5):1355-61.
2006: A Manning; V Russell; K Eastick; G H Leadbetter; NF Hallam; K Templeton; Peter Simmonds
Epidemiological profile and clinical associations of human bocavirus and other human parvoviruses.
The Journal of infectious diseases 2006;194(9):1283-90.
2006: Peter Simmonds
Recombination and selection in the evolution of picornaviruses and other Mammalian positive-stranded RNA viruses.
Journal of virology 2006;80(22):11124-40.
2006: Jeanne E Bell; Iain C Anthony; Peter Simmonds
Impact of HIV on regional & cellular organisation of the brain.
Current HIV research 2006;4(3):249-57.
2006: Iain C Anthony; Stephen N Ramage; Frances W Carnie; Peter Simmonds; Jeanne E Bell
Accelerated Tau deposition in the brains of individuals infected with human immunodeficiency virus-1 before and after the advent of highly active anti-retroviral therapy.
Acta neuropathologica 2006;111(6):529-38.
2006: M McCrossan; ME Marsden; Frances W Carnie; S Minnis; B Hansoti; Iain C Anthony; Raymond P Brettle; Jeanne E Bell; Peter Simmonds
An immune control model for viral replication in the CNS during presymptomatic HIV infection.
Brain : a journal of neurology 2006;129(Pt 2):503-16.
2006: Christopher A Ludlam; William G Powderly; Samuel A Bozzette; Michael Diamond; Marion A Koerper; Roshni Kulkarni; Bruce Ritchie; Jamie Siegel; Peter Simmonds; Samuel Stanley; Michael L Tapper; Mario von Depka
Clinical perspectives of emerging pathogens in bleeding disorders.
Lancet 2006;367(9506):252-61.
2006: Peter Simmonds; Jon Welch
Frequency and dynamics of recombination within different species of human enteroviruses.
Journal of virology 2006;80(1):483-93.
2005: Peter Simmonds; Sofie Midgley
Recombination in the genesis and evolution of hepatitis B virus genotypes.
Journal of virology 2005;79(24):15467-76.
2005: Peter Simmonds; Jens Bukh; Christophe Combet; Gilbert Deléage; Nobuyuki Enomoto; Stephen Feinstone; Phillippe Halfon; Geneviève Inchauspé; Carla Kuiken; Geert Maertens; Masashi Mizokami; Donald G Murphy; Hiroaki Okamoto; Jean-Michel Pawlotsky; François Penin; Erwin Sablon; Tadasu Shin-i; Lieven Stuyver; Heinz-Jürgen Thiel; Sergei Viazov; Amy J Weiner; Anders Widell
Consensus proposals for a unified system of nomenclature of hepatitis C virus genotypes.
Hepatology (Baltimore, Md.) 2005;42(4):962-73.
2005: Alexandra Cochrane; Gareth Hughes; Ronald A Seaton; Peter Simmonds
First evidence of HIV infection of CD8 lymphocytes expressing CD4 during primary HIV-1 infection.
AIDS (London, England) 2005;19(11):1237-9.
2005: Iain C Anthony; Stephen N Ramage; Frances W Carnie; Peter Simmonds; Jeanne E Bell
Influence of HAART on HIV-related CNS disease and neuroinflammation.
Journal of neuropathology and experimental neurology 2005;64(6):529-36.
2005: Iain C Anthony; Stephen N Ramage; Frances W Carnie; Peter Simmonds; Jeanne E Bell
Does drug abuse alter microglial phenotype and cell turnover in the context of advancing HIV infection?
Neuropathology and applied neurobiology 2005;31(3):325-38.
2004: Catriona Macfarlane; Peter Simmonds
Allelic variation of HERV-K(HML-2) endogenous retroviral elements in human populations.
Journal of molecular evolution 2004;59(5):642-56.
2004: Peter Simmonds
Genetic diversity and evolution of hepatitis C virus--15 years on.
The Journal of general virology 2004;85(Pt 11):3173-88.
2004: Andrew Tuplin; David J Evans; Peter Simmonds
Detailed mapping of RNA secondary structures in core and NS5B-encoding region sequences of hepatitis C virus by RNase cleavage and novel bioinformatic prediction methods.
The Journal of general virology 2004;85(Pt 10):3037-47.
2004: Alexandra Cochrane; Stuart Imlach; Clifford Leen; Gordon Scott; Dermot Kennedy; Peter Simmonds
High levels of human immunodeficiency virus infection of CD8 lymphocytes expressing CD4 in vivo.
Journal of virology 2004;78(18):9862-71.
2004: Peter Simmonds; Andrew Tuplin; David J Evans
Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence.
RNA (New York, N.Y.) 2004;10(9):1337-51.
2004: Juan Arango; Peter Simmonds; Raymond P Brettle; Jeanne E Bell
Does drug abuse influence the microglial response in AIDS and HIV encephalitis?
AIDS (London, England) 2004;18 Suppl 1():S69-74.
2003: S E Starkman; DM MacDonald; J C M Lewis; E C Holmes; Peter Simmonds
Geographic and species association of hepatitis B virus genotypes in non-human primates.
Virology 2003;314(1):381-93.
2003: C E Anderson; GS Tomlinson; B Pauly; F W Brannan; A Chiswick; Ruth Brack-Werner; Peter Simmonds; Jeanne E Bell
Relationship of Nef-positive and GFAP-reactive astrocytes to drug use in early and late HIV infection.
Neuropathology and applied neurobiology 2003;29(4):378-88.
2003: Jon Welch; Kate Maclaran; Tony Jordan; Peter Simmonds
Frequency, viral loads, and serotype identification of enterovirus infections in Scottish blood donors.
Transfusion 2003;43(8):1060-6.
2003: K Thom; C Morrison; J C M Lewis; Peter Simmonds
Distribution of TT virus (TTV), TTV-like minivirus, and related viruses in humans and nonhuman primates.
Virology 2003;306(2):324-33.
2003: Stuart Imlach; Clifford Leen; Jeanne E Bell; Peter Simmonds
Phenotypic analysis of peripheral blood gammadelta T lymphocytes and their targeting by human immunodeficiency virus type 1 in vivo.
Virology 2003;305(2):415-27.
2002: Alexandra Cochrane; Benjamin Searle; Alison Hardie; Roy Robertson; Toby Delahooke; Sheila Cameron; Richard S Tedder; Geoff M Dusheiko; Xavier de Lamballerie; Peter Simmonds
A genetic analysis of hepatitis C virus transmission between injection drug users.
The Journal of infectious diseases 2002;186(9):1212-21.
2002: Jeanne E Bell; Juan Arango; Roy Robertson; Raymond P Brettle; Clifford Leen; Peter Simmonds
HIV and drug misuse in the Edinburgh cohort.
Journal of acquired immune deficiency syndromes (1999) 2002;31 Suppl 2():S35-42.
2002: LM Jarvis; Peter Simmonds
Scottish experience with NAT.
Transfusion medicine (Oxford, England) 2002;12(4):259-64.
2002: John Mokili; Melissa Rogers; Jean K Carr; Peter Simmonds; Johnny M Bopopi; Brian Foley; Bette T Korber; Deborah L Birx; Francine E McCutchan
Identification of a novel clade of human immunodeficiency virus type 1 in Democratic Republic of Congo.
AIDS research and human retroviruses 2002;18(11):817-23.
2002: Andrew Tuplin; Jonny Wood; David J Evans; Arvind H Patel; Peter Simmonds
Thermodynamic and phylogenetic prediction of RNA secondary structures in the coding region of hepatitis C virus.
RNA (New York, N.Y.) 2002;8(6):824-41.
2002: Peter Simmonds; J Kurtz; Richard S Tedder
The UK blood transfusion service: over a (patent) barrel?
Lancet 2002;359(9319):1713-4.
2001: T H Wang; Y K Donaldson; Raymond P Brettle; Jeanne E Bell; Peter Simmonds
Identification of shared populations of human immunodeficiency virus type 1 infecting microglia and tissue macrophages outside the central nervous system.
Journal of virology 2001;75(23):11686-99.
2001: Stuart Imlach; S McBreen; T Shirafuji; Clifford Leen; Jeanne E Bell; Peter Simmonds
Activated peripheral CD8 lymphocytes express CD4 in vivo and are targets for infection by human immunodeficiency virus type 1.
Journal of virology 2001;75(23):11555-64.
2001: Peter Simmonds
Reconstructing the origins of human hepatitis viruses.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2001;356(1411):1013-26.
2001: J B Welch; K McGowan; B Searle; J Gillon; LM Jarvis; Peter Simmonds
Detection of enterovirus viraemia in blood donors.
Vox sanguinis 2001;80(4):211-5.
2001: S McBreen; Stuart Imlach; T Shirafuji; GR Scott; Clifford Leen; Jeanne E Bell; Peter Simmonds
Infection of the CD45RA+ (naive) subset of peripheral CD8+ lymphocytes by human immunodeficiency virus type 1 in vivo.
Journal of virology 2001;75(9):4091-102.
2001: TJ Hewson; J J Logie; Peter Simmonds; Sarah E M Howie
A CCR5-dependent novel mechanism for type 1 HIV gp120 induced loss of macrophage cell surface CD4.
Journal of immunology (Baltimore, Md. : 1950) 2001;166(8):4835-42.
2001: NM Cuceanu; Andrew Tuplin; Peter Simmonds
Evolutionarily conserved RNA secondary structures in coding and non-coding sequences at the 3' end of the hepatitis G virus/GB-virus C genome.
The Journal of general virology 2001;82(Pt 4):713-22.
2001: Peter Simmonds
The origin and evolution of hepatitis viruses in humans.
The Journal of general virology 2001;82(Pt 4):693-712.
2001: Alexandra A Cleland; C Davis; N Adams; C Lycett; LM Jarvis; H Holmes; Peter Simmonds
Development of multiplexed nucleic acid testing for human immunodeficiency virus type 1 and hepatitis C virus.
Vox sanguinis 2001;81(2):93-101.
2000: DM MacDonald; E C Holmes; J C M Lewis; Peter Simmonds
Detection of hepatitis B virus infection in wild-born chimpanzees (Pan troglodytes verus): phylogenetic relationships with human and other primate genotypes.
Journal of virology 2000;74(9):4253-7.
2000: DB Smith; M Basaras; S Frost; Daniel T Haydon; NM Cuceanu; LE Prescott; C Kamenka; D Millband; Mahomed A Sathar; Peter Simmonds
Phylogenetic analysis of GBV-C/hepatitis G virus.
The Journal of general virology 2000;81(Pt 3):769-80.
2000: LM Jarvis; Alexandra A Cleland; Peter Simmonds; Brian Charles Dow; M Munro; A Jordan; Chris V Prowse; P L Yap
Screening blood donations for hepatitis C virus by polymerase chain reaction.
Vox sanguinis 2000;78(1):57-8.
1999: Mahomed A Sathar; PN Soni; R Pegoraro; Peter Simmonds; DB Smith; A P Dhillon; Geoffrey Dusheiko
A new variant of GB virus C/hepatitis G virus (GBV-C/HGV) from South Africa.
Virus research 1999;64(2):151-60.
1999: Peter Simmonds; LE Prescott; Christopher Logue; F Davidson; A E Thomas; Christopher A Ludlam
TT virus--part of the normal human flora?
The Journal of infectious diseases 1999;180(5):1748-50.
1999: GS Tomlinson; Peter Simmonds; Anthony Busuttil; A Chiswick; Jeanne E Bell
Upregulation of microglia in drug users with and without pre-symptomatic HIV infection.
Neuropathology and applied neurobiology 1999;25(5):369-79.
1999: A Morris; ME Marsden; K Halcrow; ES Hughes; Raymond P Brettle; Jeanne E Bell; Peter Simmonds
Mosaic structure of the human immunodeficiency virus type 1 genome infecting lymphoid cells and the brain: evidence for frequent in vivo recombination events in the evolution of regional populations.
Journal of virology 1999;73(10):8720-31.
1999: J Mellor; A Hawkins; Peter Simmonds
Genotype dependence of hepatitis C virus load measurement in commercially available quantitative assays.
Journal of clinical microbiology 1999;37(8):2525-32.
1999: LE Prescott; DM MacDonald; F Davidson; John Mokili; D I Pritchard; David E Arnot; E M Riley; B M Greenwood; S Hamid; AA Saeed; M O McClure; DB Smith; Peter Simmonds
Sequence diversity of TT virus in geographically dispersed human populations.
The Journal of general virology 1999;80 ( Pt 7)():1751-8.
1999: Peter Simmonds; DB Smith
Structural constraints on RNA virus evolution.
Journal of virology 1999;73(7):5787-94.
1999: John Mokili; Christopher M Wade; S M Burns; WA Cutting; J M Bopopi; S D Green; JF Peutherer; Peter Simmonds
Genetic heterogeneity of HIV type 1 subtypes in Kimpese, rural Democratic Republic of Congo.
AIDS research and human retroviruses 1999;15(7):655-64.
1999: F Davidson; D MacDonald; John Mokili; LE Prescott; S Graham; Peter Simmonds
Early acquisition of TT virus (TTV) in an area endemic for TTV infection.
The Journal of infectious diseases 1999;179(5):1070-6.
1999: C Casino; J McAllister; F Davidson; J Power; Emer Lawlor; PL Yap; Peter Simmonds; DB Smith
Variation of hepatitis C virus following serial transmission: multiple mechanisms of diversification of the hypervariable region and evidence for convergent genome evolution.
The Journal of general virology 1999;80 ( Pt 3)():717-25.
1999: DM MacDonald; GR Scott; Daniel Clutterbuck; Peter Simmonds
Infrequent detection of TT virus infection in intravenous drug users, prostitutes, and homosexual men.
The Journal of infectious diseases 1999;179(3):686-9.
1999: E J Shepherd; R P Brettle; P P Liberski; A Aguzzi; James W Ironside; Peter Simmonds; Jeanne E Bell
Spinal cord pathology and viral burden in homosexuals and drug users with AIDS.
Neuropathology and applied neurobiology 1999;25(1):2-10.
1999: Helge Bell; Kjell Block Hellum; S Harthug; Bjørn Myrvang; Ståle Ritland; A Maeland; Bent von der Lippe; Kristian Bjøro; Kjell Skaug; BG Gutigard; Nils Raknerud; Peter Simmonds
Treatment with interferon-alpha2a alone or interferon-alpha2a plus ribavirin in patients with chronic hepatitis C previously treated with interferon-alpha2a. CONSTRUCT Group.
Scandinavian journal of gastroenterology 1999;34(2):194-8.
1999: Peter Simmonds
Viral heterogeneity of the hepatitis C virus.
Journal of hepatology 1999;31 Suppl 1():54-60.
1999: DB Smith; Emer Lawlor; J Power; James M O'Riordan; J McAllister; C Lycett; F Davidson; Stephen Pathirana; Jeremy A Garson; Richard S Tedder; PL Yap; Peter Simmonds
A second outbreak of hepatitis C virus infection from anti-D immunoglobulin in Ireland.
Vox sanguinis 1999;76(3):175-80.
1999: Alexandra A Cleland; P Nettleton; LM Jarvis; Peter Simmonds
Use of bovine viral diarrhoea virus as an internal control for amplification of hepatitis C virus.
Vox sanguinis 1999;76(3):170-4.
1999: Emer Lawlor; J Power; Jeremy A Garson; PL Yap; F Davidson; G Columb; D Smith; L Pomeroy; James M O'Riordan; Peter Simmonds; Richard S Tedder
Transmission rates of hepatitis C virus by different batches of a contaminated anti-D immunoglobulin preparation.
Vox sanguinis 1999;76(3):138-43.
1998: Einar S Berg; LM Jarvis; Peter Simmonds; Helge Bell; Kjell Skaug
Detection of GB virus C RNA by GBV-C LCx and two PCR assays with primers from the 5' non-coding and NS5B region.
Journal of virological methods 1998;76(1-2):43-9.
1998: CS Blair; F Davidson; C Lycett; D M McDonald; Geoffrey Haydon; PL Yap; Peter C Hayes; Peter Simmonds; J Gillon
Prevalence, incidence, and clinical characteristics of hepatitis G virus/GB virus C infection in Scottish blood donors.
The Journal of infectious diseases 1998;178(6):1779-82.
1998: Jeanne E Bell; Raymond P Brettle; A Chiswick; Peter Simmonds
HIV encephalitis, proviral load and dementia in drug users and homosexuals with AIDS. Effect of neocortical involvement.
Brain : a journal of neurology 1998;121 ( Pt 11)():2043-52.
1998: Peter Simmonds
Transfusion virology: progress and challenges.
Blood reviews 1998;12(3):171-7.
1998: NJ Adams; LE Prescott; LM Jarvis; J C M Lewis; M O McClure; DB Smith; Peter Simmonds
Detection in chimpanzees of a novel flavivirus related to GB virus-C/hepatitis G virus.
The Journal of general virology 1998;79 ( Pt 8)():1871-7.
1998: Peter Simmonds; F Davidson; C Lycett; LE Prescott; DM MacDonald; J Ellender; PL Yap; Christopher A Ludlam; Geoffrey Haydon; J Gillon; LM Jarvis
Detection of a novel DNA virus (TTV) in blood donors and blood products.
Lancet 1998;352(9123):191-5.
1998: MF Scallan; Daniel Clutterbuck; LM Jarvis; GR Scott; Peter Simmonds
Sexual transmission of GB virus C/hepatitis G virus.
Journal of medical virology 1998;55(3):203-8.
1998: J McAllister; C Casino; F Davidson; J Power; Emer Lawlor; PL Yap; Peter Simmonds; DB Smith
Long-term evolution of the hypervariable region of hepatitis C virus in a common-source-infected cohort.
Journal of virology 1998;72(6):4893-905.
1998: Geoffrey Haydon; LM Jarvis; CS Blair; Peter Simmonds; David J Harrison; Kenneth J Simpson; Peter C Hayes
Clinical significance of intrahepatic hepatitis C virus levels in patients with chronic HCV infection.
Gut 1998;42(4):570-5.
1998: J Mellor; Geoffrey Haydon; C Blair; W Livingstone; Peter Simmonds
Low level or absent in vivo replication of hepatitis C virus and hepatitis G virus/GB virus C in peripheral blood mononuclear cells.
The Journal of general virology 1998;79 ( Pt 4)():705-14.
1998: P M Strappe; T H Wang; C A McKenzie; S Lowrie; Peter Simmonds; Jeanne E Bell
In situ polymerase chain reaction amplification of HIV-1 DNA in brain tissue.
Journal of virological methods 1998;70(2):119-27.
1998: LM Jarvis; Helge Bell; Peter Simmonds; A Hawkins; Kjell Block Hellum; S Harthug; A Maeland; Ståle Ritland; Bjørn Myrvang; Bent von der Lippe; Nils Raknerud; Kjell Skaug
The effect of treatment with alpha-interferon on hepatitis G/GBV-C viraemia. The CONSTRUCT Group.
Scandinavian journal of gastroenterology 1998;33(2):195-200.
1997: I Nordøy; Henrik Krarup; Helge Bell; Peer B Christensen; K Elgjo; Bent von der Lippe; O S De Muckadell; A Maeland; Helmer Ring-Larsen; Helvi H Samdal; Peter Simmonds; Kjell Skaug; Ulrik Tage-Jensen; Erik Schrumpf
Interferon-alpha 2b therapy in low-activity hepatitis C: a pilot study.
Scandinavian journal of gastroenterology 1997;32(12):1256-60.
1997: Judith Neville; LE Prescott; V Bhattacherjee; N Adams; I Pike; B Rodgers; A El-Zayadi; S Hamid; G M Dusheiko; AA Saeed; Geoffrey Haydon; Peter Simmonds
Antigenic variation of core, NS3, and NS5 proteins among genotypes of hepatitis C virus.
Journal of clinical microbiology 1997;35(12):3062-70.
1997: ES Hughes; Jeanne E Bell; Peter Simmonds
Investigation of population diversity of human immunodeficiency virus type 1 in vivo by nucleotide sequencing and length polymorphism analysis of the V1/V2 hypervariable region of env.
The Journal of general virology 1997;78 ( Pt 11)():2871-82.
1997: LE Prescott; A Berger; Jean-Michel Pawlotsky; P Conjeevaram; I Pike; Peter Simmonds
Sequence analysis of hepatitis C virus variants producing discrepant results with two different genotyping assays.
Journal of medical virology 1997;53(3):237-44.
1997: D B Smith; Peter Simmonds
Characteristics of nucleotide substitution in the hepatitis C virus genome: constraints on sequence change in coding regions at both ends of the genome.
Journal of molecular evolution 1997;45(3):238-46.
1997: P M Strappe; T H Wang; C A McKenzie; S Lowrie; Peter Simmonds; Jeanne E Bell
Enhancement of immunohistochemical detection of HIV-1 p24 antigen in brain by tyramide signal amplification.
Journal of virological methods 1997;67(1):103-12.
1997: RW Chamberlain; NJ Adams; L A Taylor; Peter Simmonds; Richard M Elliott
The complete coding sequence of hepatitis C virus genotype 5a, the predominant genotype in South Africa.
Biochemical and biophysical research communications 1997;236(1):44-9.
1997: DB Smith; NM Cuceanu; F Davidson; LM Jarvis; John Mokili; S Hamid; Christopher A Ludlam; Peter Simmonds
Discrimination of hepatitis G virus/GBV-C geographical variants by analysis of the 5' non-coding region.
The Journal of general virology 1997;78 ( Pt 7)():1533-42.
1997: DB Smith; J McAllister; C Casino; Peter Simmonds
Virus 'quasispecies': making a mountain out of a molehill?
The Journal of general virology 1997;78 ( Pt 7)():1511-9.
1997: RW Chamberlain; N Adams; AA Saeed; Peter Simmonds; Richard M Elliott
Complete nucleotide sequence of a type 4 hepatitis C virus variant, the predominant genotype in the Middle East.
The Journal of general virology 1997;78 ( Pt 6)():1341-7.
1997: NJ Adams; RW Chamberlain; L A Taylor; F Davidson; C K Lin; Richard M Elliott; Peter Simmonds
Complete coding sequence of hepatitis C virus genotype 6a.
Biochemical and biophysical research communications 1997;234(2):393-6.
1997: Peter Simmonds
Clinical relevance of hepatitis C virus genotypes.
Gut 1997;40(3):291-3.
1997: DB Smith; Stephen Pathirana; F Davidson; Emer Lawlor; J Power; PL Yap; Peter Simmonds
The origin of hepatitis C virus genotypes.
The Journal of general virology 1997;78 ( Pt 2)():321-8.
1997: ES Hughes; Jeanne E Bell; Peter Simmonds
Investigation of the dynamics of the spread of human immunodeficiency virus to brain and other tissues by evolutionary analysis of sequences from the p17gag and env genes.
Journal of virology 1997;71(2):1272-80.
1997: Geoffrey Haydon; LM Jarvis; Peter Simmonds; David J Harrison; O James Garden; Peter C Hayes
Association between chronic hepatitis C infection and hepatocellular carcinoma in a Scottish population.
Gut 1997;40(1):128-32.
1997: Helge Bell; Kjell Block Hellum; S Harthug; A Maeland; Ståle Ritland; Bjørn Myrvang; Bent von der Lippe; Nils Raknerud; Kjell Skaug; BG Gutigard; R Skjaerven; L E Prescott; Peter Simmonds
Genotype, viral load and age as independent predictors of treatment outcome of interferon-alpha 2a treatment in patients with chronic hepatitis C. Construct group.
Scandinavian journal of infectious diseases 1997;29(1):17-22.
1997: Peter Simmonds; DB Smith
Investigation of the pattern of diversity of hepatitis C virus in relation to times of transmission.
Journal of viral hepatitis 1997;4 Suppl 1():69-74.
1997: Geoffrey Haydon; LM Jarvis; Kenneth J Simpson; Peter C Hayes; Peter Simmonds
The clinical significance of the detection of hepatitis GBV-C RNA in the serum of patients with fulminant, presumed viral, hepatitis.
Journal of viral hepatitis 1997;4(1):45-9.
1997: A Hawkins; F Davidson; Peter Simmonds
Comparison of plasma virus loads among individuals infected with hepatitis C virus (HCV) genotypes 1, 2, and 3 by quantiplex HCV RNA assay versions 1 and 2, Roche Monitor assay, and an in-house limiting dilution method.
Journal of clinical microbiology 1997;35(1):187-92.
1996: Peter Simmonds; J Mellor; T Sakuldamrongpanich; C Nuchaprayoon; S Tanprasert; E C Holmes; DB Smith
Evolutionary analysis of variants of hepatitis C virus found in South-East Asia: comparison with classifications based upon sequence similarity.
The Journal of general virology 1996;77 ( Pt 12)():3013-24.
1996: LM Jarvis; F Davidson; JP Hanley; PL Yap; C A Ludlam; Peter Simmonds
Infection with hepatitis G virus among recipients of plasma products.
Lancet 1996;348(9038):1352-5.
1996: LE Prescott; Peter Simmonds; C L Lai; N K Chan; I Pike; PL Yap; C K Lin
Detection and clinical features of hepatitis C virus type 6 infections in blood donors from Hong Kong.
Journal of medical virology 1996;50(2):168-75.
1996: W J Livingstone; M Moore; D Innes; Jeanne E Bell; Peter Simmonds
Frequent infection of peripheral blood CD8-positive T-lymphocytes with HIV-1. Edinburgh Heterosexual Transmission Study Group.
Lancet 1996;348(9028):649-54.
1996: JP Hanley; LM Jarvis; Peter Simmonds; C A Ludlam
Development of anti-interferon antibodies and breakthrough hepatitis during treatment for HCV infection in haemophiliacs.
British journal of haematology 1996;94(3):551-6.
1996: JP Hanley; LM Jarvis; J Andrews; R Dennis; R Lee; Peter Simmonds; J Piris; P Hayes; C A Ludlam
Investigation of chronic hepatitis C infection in individuals with haemophilia: assessment of invasive and non-invasive methods.
British journal of haematology 1996;94(1):159-65.
1996: Brian Charles Dow; I Buchanan; H Munro; E A Follett; F Davidson; LE Prescott; PL Yap; Peter Simmonds
Relevance of RIBA-3 supplementary test to HCV PCR positivity and genotypes for HCV confirmation of blood donors.
Journal of medical virology 1996;49(2):132-6.
1996: Brian Charles Dow; H Munro; I Buchanan; E A Follett; F Davidson; PL Yap; Peter Simmonds
Third-generation recombinant immunoblot assay: comparison of reactivities according to hepatitis C virus genotype.
Transfusion 1996;36(6):547-51.
1996: Peter Simmonds; J Mellor; A Craxi; J M Sanchez-Tapias; A Alberti; J Prieto; M Colombo; M G Rumi; O Lo Iacano; S Ampurdanes-Mingall; X Forns-Bernhardt; Liliana Chemello; M P Civeira; C Frost; Geoffrey Dusheiko
Epidemiological, clinical and therapeutic associations of hepatitis C types in western European patients.
Journal of hepatology 1996;24(5):517-24.
1996: Jeanne E Bell; Y K Donaldson; S Lowrie; C A McKenzie; R A Elton; A Chiswick; Raymond P Brettle; James W Ironside; Peter Simmonds
Influence of risk group and zidovudine therapy on the development of HIV encephalitis and cognitive impairment in AIDS patients.
AIDS (London, England) 1996;10(5):493-9.
1996: LM Jarvis; C A Ludlam; J A Ellender; L Nemes; Stephen Field; E Song; A Chuansumrit; F E Preston; Peter Simmonds
Investigation of the relative infectivity and pathogenicity of different hepatitis C virus genotypes in hemophiliacs.
Blood 1996;87(7):3007-11.
1996: JP Hanley; LM Jarvis; J Andrew; R Dennis; Peter C Hayes; J Piris; R Lee; Peter Simmonds; C A Ludlam
Interferon treatment for chronic hepatitis C infection in hemophiliacs--influence of virus load, genotype, and liver pathology on response.
Blood 1996;87(5):1704-9.
1996: D B Smith; F Davidson; PL Yap; H Brown; Janice A Kolberg; Jill Detmer; MS Urdea; Peter Simmonds
Levels of hepatitis C virus in blood donors infected with different viral genotypes. International HCV Collaborative Study Group.
The Journal of infectious diseases 1996;173(3):727-30.
1996: S K Dhaliwal; LE Prescott; Brian Charles Dow; F Davidson; H Brown; PL Yap; E A Follett; Peter Simmonds
Influence of viraemia and genotype upon serological reactivity in screening assays for antibody to hepatitis C virus.
Journal of medical virology 1996;48(2):184-90.
1996: J Mellor; E A Walsh; LE Prescott; LM Jarvis; F Davidson; PL Yap; Peter Simmonds
Survey of type 6 group variants of hepatitis C virus in Southeast Asia by using a core-based genotyping assay.
Journal of clinical microbiology 1996;34(2):417-23.
1996: Helge Bell; Kjell Block Hellum; S Harthug; A Maeland; Ståle Ritland; Bjørn Myrvang; Bent von der Lippe; Nils Raknerud; Kjell Skaug; L Prescott; Peter Simmonds
Prevalence of hepatitis C genotypes among patients with chronic hepatitis C in Norway. Construct Group.
Scandinavian journal of infectious diseases 1996;28(4):357-9.
1995: Paresh Jobanputra; F Davidson; S Graham; H O'Neill; Peter Simmonds; P L Yap
High frequency of parvovirus B19 in patients tested for rheumatoid factor.
BMJ (Clinical research ed.) 1995;311(7019):1542.
1995: J Mellor; E C Holmes; LM Jarvis; PL Yap; Peter Simmonds
Investigation of the pattern of hepatitis C virus sequence diversity in different geographical regions: implications for virus classification. The International HCV Collaborative Study Group.
The Journal of general virology 1995;76 ( Pt 10)():2493-507.
1995: J P Power; F Davidson; James M O'Riordan; Peter Simmonds; PL Yap; Emer Lawlor
Hepatitis C infection from anti-D immunoglobulin.
Lancet 1995;346(8971):372-3.
1995: DB Smith; J Mellor; LM Jarvis; F Davidson; Janice A Kolberg; MS Urdea; PL Yap; Peter Simmonds
Variation of the hepatitis C virus 5' non-coding region: implications for secondary structure, virus detection and typing. The International HCV Collaborative Study Group.
The Journal of general virology 1995;76 ( Pt 7)():1749-61.
1995: J P Power; Emer Lawlor; F Davidson; E C Holmes; PL Yap; Peter Simmonds
Molecular epidemiology of an outbreak of infection with hepatitis C virus in recipients of anti-D immunoglobulin.
Lancet 1995;345(8959):1211-3.
1995: F Davidson; Peter Simmonds; J C Ferguson; L M Jarvis; Brian Charles Dow; E A Follett; C R Seed; T Krusius; C Lin; G A Medgyesi
Survey of major genotypes and subtypes of hepatitis C virus using RFLP of sequences amplified from the 5' non-coding region.
The Journal of general virology 1995;76 ( Pt 5)():1197-204.
1995: Geoffrey Haydon; LM Jarvis; Peter Simmonds; Peter C Hayes
Association between chronic hepatitis C infection and hepatocellular carcinoma.
Lancet 1995;345(8954):928-9.
1995: D B Smith; F Davidson; Peter Simmonds
Hepatitis C virus variants and the role of genotyping.
Journal of hepatology 1995;23 Suppl 2():26-31.
1995: H G Watson; C A Ludlam; F McOmish; R Dennis; H Hart; Peter Simmonds
Absence of hepatitis A virus transmission by high-purity solvent detergent treated coagulation factor concentrates in Scottish haemophiliacs.
British journal of haematology 1995;89(1):214-6.
1995: E C Holmes; L Q Zhang; P Robertson; A Cleland; E Harvey; Peter Simmonds; Andrew J Leigh Brown
The molecular epidemiology of human immunodeficiency virus type 1 in Edinburgh.
The Journal of infectious diseases 1995;171(1):45-53.
1994: LM Jarvis; H G Watson; F McOmish; JF Peutherer; C A Ludlam; Peter Simmonds
Frequent reinfection and reactivation of hepatitis C virus genotypes in multitransfused hemophiliacs.
The Journal of infectious diseases 1994;170(4):1018-22.
1994: Y K Donaldson; Jeanne E Bell; E C Holmes; ES Hughes; H K Brown; Peter Simmonds
In vivo distribution and cytopathology of variants of human immunodeficiency virus type 1 showing restricted sequence variability in the V3 loop.
Journal of virology 1994;68(9):5991-6005.
1994: Peter Simmonds; DB Smith; F McOmish; PL Yap; Janice A Kolberg; MS Urdea; E C Holmes
Identification of genotypes of hepatitis C virus by sequence comparisons in the core, E1 and NS-5 regions.
The Journal of general virology 1994;75 ( Pt 5)():1053-61.
1994: Y K Donaldson; Jeanne E Bell; James W Ironside; Raymond P Brettle; J Roy Robertson; Anthony Busuttil; Peter Simmonds
Redistribution of HIV outside the lymphoid system with onset of AIDS.
Lancet 1994;343(8894):383-5.
1994: F McOmish; PL Yap; H Hart; K Peerlinck; S M Burns; Peter Simmonds
Failure to detect hepatitis A virus RNA in factor VIII concentrates using the polymerase chain reaction. Results of a preliminary study.
Vox sanguinis 1994;67 Suppl 1():47-50.
1994: Brian Charles Dow; E A Follett; H Munro; I Buchanan; K Roy; F McOmish; PL Yap; Peter Simmonds
Failure of 2nd- and 3rd-generation HCV ELISA and RIBA to detect HCV polymerase chain reaction-positive donations.
Vox sanguinis 1994;67(2):236-7.
1993: Peter Simmonds; E C Holmes; T A Cha; S W Chan; F McOmish; B Irvine; E Beall; PL Yap; Janice A Kolberg; MS Urdea
Classification of hepatitis C virus into six major genotypes and a series of subtypes by phylogenetic analysis of the NS-5 region.
The Journal of general virology 1993;74 ( Pt 11)():2391-9.
1993: Brian Charles Dow; I Coote; H Munro; F McOmish; PL Yap; Peter Simmonds; E A Follett
Confirmation of hepatitis C virus antibody in blood donors.
Journal of medical virology 1993;41(3):215-20.
1993: Jeanne E Bell; Anthony Busuttil; James W Ironside; Selma Rebus; Y K Donaldson; Peter Simmonds; JF Peutherer
Human immunodeficiency virus and the brain: investigation of virus load and neuropathologic changes in pre-AIDS subjects.
The Journal of infectious diseases 1993;168(4):818-24.
1993: H Hart; F McOmish; W G Hart; Peter Simmonds; PL Yap
A comparison of polymerase chain reaction and an infectivity assay for human immunodeficiency virus type 1 titration during virus inactivation of blood components.
Transfusion 1993;33(10):838-41.
1993: E C Holmes; L Q Zhang; Peter Simmonds; A S Rogers; Andrew J Leigh Brown
Molecular investigation of human immunodeficiency virus (HIV) infection in a patient of an HIV-infected surgeon.
The Journal of infectious diseases 1993;167(6):1411-4.
1993: L Q Zhang; P MacKenzie; A Cleland; E C Holmes; Andrew J Leigh Brown; Peter Simmonds
Selection for specific sequences in the external envelope protein of human immunodeficiency virus type 1 upon primary infection.
Journal of virology 1993;67(6):3345-56.
1993: Peter Simmonds; K A Rose; S Graham; S W Chan; F McOmish; Brian Charles Dow; E A Follett; PL Yap; H Marsden
Mapping of serotype-specific, immunodominant epitopes in the NS-4 region of hepatitis C virus (HCV): use of type-specific peptides to serologically differentiate infections with HCV types 1, 2, and 3.
Journal of clinical microbiology 1993;31(6):1493-503.
1993: Peter Simmonds; F McOmish; PL Yap; S W Chan; C K Lin; Geoffrey Dusheiko; A A Saeed; E C Holmes
Sequence variability in the 5' non-coding region of hepatitis C virus: identification of a new virus type and restrictions on sequence diversity.
The Journal of general virology 1993;74 ( Pt 4)():661-8.
1993: J P Lam; F McOmish; S M Burns; PL Yap; J Y Mok; Peter Simmonds
Infrequent vertical transmission of hepatitis C virus.
The Journal of infectious diseases 1993;167(3):572-6.
1993: F McOmish; PL Yap; A Jordan; H Hart; B J Cohen; Peter Simmonds
Detection of parvovirus B19 in donated blood: a model system for screening by polymerase chain reaction.
Journal of clinical microbiology 1993;31(2):323-8.
1993: F McOmish; S W Chan; Brian Charles Dow; J Gillon; W D Frame; R J Crawford; PL Yap; E A Follett; Peter Simmonds
Detection of three types of hepatitis C virus in blood donors: investigation of type-specific differences in serologic reactivity and rate of alanine aminotransferase abnormalities.
Transfusion 1993;33(1):7-13.
1992: C A Robertson; J Y Mok; Karin Froebel; Peter Simmonds; S M Burns; Howard S Marsden; S Graham
Maternal antibodies to gp120 V3 sequence do not correlate with protection against vertical transmission of human immunodeficiency virus.
The Journal of infectious diseases 1992;166(4):704-9.
1992: S W Chan; F McOmish; E C Holmes; Brian Charles Dow; JF Peutherer; E Follett; PL Yap; Peter Simmonds
Analysis of a new hepatitis C virus type and its phylogenetic relationship to existing variants.
The Journal of general virology 1992;73 ( Pt 5)():1131-41.
1992: H G Watson; C A Ludlam; Selma Rebus; L Q Zhang; JF Peutherer; Peter Simmonds
Use of several second generation serological assays to determine the true prevalence of hepatitis C virus infection in haemophiliacs treated with non-virus inactivated factor VIII and IX concentrates.
British journal of haematology 1992;80(4):514-8.
1992: W J Nicholson; S H Black; Peter Simmonds; C W Chung; D Aw; JF Peutherer
Comparison of hepatitis B virus subtyping of d/y determinants by radioimmunoprecipitation assay and the polymerase chain reaction.
Journal of medical virology 1992;36(1):21-7.
1992: Jeremy A Garson; J P Clewley; Peter Simmonds; L Q Zhang; J Mori; C Ring; E A Follett; Brian Charles Dow; S Martin; H Gunson
Hepatitis C viraemia in United Kingdom blood donors. A multicentre study.
Vox sanguinis 1992;62(4):218-23.
1991: S W Chan; Peter Simmonds; F McOmish; PL Yap; R Mitchell; Brian Charles Dow; E Follett
Serological responses to infection with three different types of hepatitis C virus.
Lancet 1991;338(8779):1391.
1991: Peter Simmonds; D Beatson; R J Cuthbert; H Watson; B Reynolds; JF Peutherer; J V Parry; C A Ludlam; C M Steel
Determinants of HIV disease progression: six-year longitudinal study in the Edinburgh haemophilia/HIV cohort.
Lancet 1991;338(8776):1159-63.
1991: Peter Simmonds; L Q Zhang; F McOmish; P Balfe; C A Ludlam; Andrew J Leigh Brown
Discontinuous sequence change of human immunodeficiency virus (HIV) type 1 env sequences in plasma viral and lymphocyte-associated proviral populations in vivo: implications for models of HIV pathogenesis.
Journal of virology 1991;65(11):6266-76.
1991: L Q Zhang; Peter Simmonds; C A Ludlam; Andrew J Leigh Brown
Detection, quantification and sequencing of HIV-1 from the plasma of seropositive individuals and from factor VIII concentrates.
AIDS (London, England) 1991;5(6):675-81.
1990: Peter Simmonds; L Q Zhang; H G Watson; Selma Rebus; E D Ferguson; P Balfe; G H Leadbetter; PL Yap; JF Peutherer; C A Ludlam
Hepatitis C quantification and sequencing in blood products, haemophiliacs, and drug users.
Lancet 1990;336(8729):1469-72.
1990: Peter Simmonds; P Balfe; C A Ludlam; JO Bishop; Andrew J Leigh Brown
Analysis of sequence diversity in hypervariable regions of the external glycoprotein of human immunodeficiency virus type 1.
Journal of virology 1990;64(12):5840-50.
1990: P Balfe; Peter Simmonds; C A Ludlam; JO Bishop; Andrew J Leigh Brown
Concurrent evolution of human immunodeficiency virus type 1 in patients infected from the same source: rate of sequence change and low frequency of inactivating mutations.
Journal of virology 1990;64(12):6221-33.
1990: Peter Simmonds; P Balfe; JF Peutherer; C A Ludlam; JO Bishop; Andrew J Leigh Brown
Human immunodeficiency virus-infected individuals contain provirus in small numbers of peripheral mononuclear cells and at low copy numbers.
Journal of virology 1990;64(2):864-72.
1990: Peter Simmonds
Variation in HIV virus load of individuals at different stages in infection: possible relationship with risk of transmission.
AIDS (London, England) 1990;4 Suppl 1():S77-83.
1988: C M Steel; C A Ludlam; D Beatson; JF Peutherer; R J Cuthbert; Peter Simmonds; H Morrison; M Jones
HLA haplotype A1 B8 DR3 as a risk factor for HIV-related disease.
Lancet 1988;1(8596):1185-8.
1988: Peter Simmonds; alex lainson; R Cuthbert; C M Steel; JF Peutherer; C A Ludlam
HIV antigen and antibody detection: variable responses to infection in the Edinburgh haemophiliac cohort.
British medical journal (Clinical research ed.) 1988;296(6622):593-8.