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Michael Smerdon

Research Profile

Physiology

Phenomena

Ultraviolet Rays

Chemicals & Drugs

Anatomy

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DNA Damage

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Publications

TOP 3
Wioletta Czaja; Peng Mao; Michael J Smerdon
The Emerging Roles of ATP-Dependent Chromatin Remodeling Enzymes in Nucleotide Excision Repair.
Wioletta Czaja; Vyacheslav A Bespalov; John M Hinz; Michael J Smerdon
Proficient repair in chromatin remodeling defective ino80 mutants of Saccharomyces cerevisiae highlights replication defects as the main contributor to DNA damage sensitivity.
John M Hinz; Yesenia Rodriguez; Michael J Smerdon
Rotational dynamics of DNA on the nucleosome surface markedly impact accessibility to a DNA repair enzyme.

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All Publications

2012: Wioletta Czaja; Peng Mao; Michael J Smerdon
The Emerging Roles of ATP-Dependent Chromatin Remodeling Enzymes in Nucleotide Excision Repair.
International journal of molecular sciences 2012;13(9):11954-73.
2010: Wioletta Czaja; Vyacheslav A Bespalov; John M Hinz; Michael J Smerdon
Proficient repair in chromatin remodeling defective ino80 mutants of Saccharomyces cerevisiae highlights replication defects as the main contributor to DNA damage sensitivity.
DNA repair 2010;9(9):976-84.
2010: John M Hinz; Yesenia Rodriguez; Michael J Smerdon
Rotational dynamics of DNA on the nucleosome surface markedly impact accessibility to a DNA repair enzyme.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(10):4646-51.
2010: Ronita Nag; McKenna Kyriss; John W Smerdon; John J Wyrick; Michael J Smerdon
A cassette of N-terminal amino acids of histone H2B are required for efficient cell survival, DNA repair and Swi/Snf binding in UV irradiated yeast.
Nucleic acids research 2010;38(5):1450-60.
2009: Ronita Nag; Michael J Smerdon
Altering the chromatin landscape for nucleotide excision repair.
Mutation research 2009;682(1):13-20.
2009: Shubho Chaudhuri; John J Wyrick; Michael J Smerdon
Histone H3 Lys79 methylation is required for efficient nucleotide excision repair in a silenced locus of Saccharomyces cerevisiae.
Nucleic acids research 2009;37(5):1690-700.
2008: Ronita Nag; Feng Gong; Deirdre Fahy; Michael J Smerdon
A single amino acid change in histone H4 enhances UV survival and DNA repair in yeast.
Nucleic acids research 2008;36(11):3857-66.
2008: Feng Gong; Deirdre Fahy; Hong Liu; Weidong Wang; Michael J Smerdon
Role of the mammalian SWI/SNF chromatin remodeling complex in the cellular response to UV damage.
Cell cycle (Georgetown, Tex.) 2008;7(8):1067-74.
2007: Scott C Maloney; Jennifer E Adair; Michael J Smerdon; Raymond Reeves
Gene-specific nucleotide excision repair is impaired in human cells expressing elevated levels of high mobility group A1 nonhistone proteins.
DNA repair 2007;6(9):1371-9.
2007: Jennifer E Adair; Scott C Maloney; Gregory A Dement; Kelsey J Wertzler; Michael J Smerdon; Raymond Reeves
High-mobility group A1 proteins inhibit expression of nucleotide excision repair factor xeroderma pigmentosum group A.
Cancer research 2007;67(13):6044-52.
2007: Shima Nakanishi; Rajendra Prasad; Samuel H Wilson; Michael J Smerdon
Different structural states in oligonucleosomes are required for early versus late steps of base excision repair.
Nucleic acids research 2007;35(13):4313-21.
2006: Feng Gong; Deirdre Fahy; Michael J Smerdon
Rad4-Rad23 interaction with SWI/SNF links ATP-dependent chromatin remodeling with nucleotide excision repair.
Nature structural & molecular biology 2006;13(10):902-7.
2005: Zeljko M Svedruzić; Chenbo Wang; Joseph V Kosmoski; Michael J Smerdon
Accommodation and repair of a UV photoproduct in DNA at different rotational settings on the nucleosome surface.
The Journal of biological chemistry 2005;280(48):40051-7.
2005: Antonio Conconi; Michel Paquette; Deirdre Fahy; Vyacheslav A Bespalov; Michael J Smerdon
Repair-independent chromatin assembly onto active ribosomal genes in yeast after UV irradiation.
Molecular and cellular biology 2005;25(22):9773-83.
2005: Jennifer E Adair; Youngho Kwon; Gregory A Dement; Michael J Smerdon; Raymond Reeves
Inhibition of nucleotide excision repair by high mobility group protein HMGA1.
The Journal of biological chemistry 2005;280(37):32184-92.
2005: Youngho Kwon; Michael J Smerdon
DNA repair in a protein-DNA complex: searching for the key to get in.
Mutation research 2005;577(1-2):118-30.
2005: Raymond Waters; Michael J Smerdon
Preface.
DNA repair 2005;4(8):853-4.
2005: Feng Gong; Youngho Kwon; Michael J Smerdon
Nucleotide excision repair in chromatin and the right of entry.
DNA repair 2005;4(8):884-96.
2005: Deirdre Fahy; Antonio Conconi; Michael J Smerdon
Rapid changes in transcription and chromatin structure of ribosomal genes in yeast during growth phase transitions.
Experimental cell research 2005;305(2):365-73.
2005: Brian C Beard; Jill J Stevenson; Samuel H Wilson; Michael J Smerdon
Base excision repair in nucleosomes lacking histone tails.
DNA repair 2005;4(2):203-9.
2004: Shisheng Li; Michael J Smerdon
Dissecting transcription-coupled and global genomic repair in the chromatin of yeast GAL1-10 genes.
The Journal of biological chemistry 2004;279(14):14418-26.
2004: Brian C Beard; Michael J Smerdon
Analysis of DNA repair on nucleosome templates.
Methods in enzymology 2004;377():499-507.
2003: Youngho Kwon; Michael J Smerdon
Binding of zinc finger protein transcription factor IIIA to its cognate DNA sequence with single UV photoproducts at specific sites and its effect on DNA repair.
The Journal of biological chemistry 2003;278(46):45451-9.
2003: Brian C Beard; Samuel H Wilson; Michael J Smerdon
Suppressed catalytic activity of base excision repair enzymes on rotationally positioned uracil in nucleosomes.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(13):7465-70.
2002: Shisheng Li; Michael J Smerdon
Nucleosome structure and repair of N-methylpurines in the GAL1-10 genes of Saccharomyces cerevisiae.
The Journal of biological chemistry 2002;277(47):44651-9.
2002: Shisheng Li; Michael J Smerdon
Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae.
The EMBO journal 2002;21(21):5921-9.
2002: Antonio Conconi; Vyacheslav A Bespalov; Michael J Smerdon
Transcription-coupled repair in RNA polymerase I-transcribed genes of yeast.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(2):649-54.
2001: Joseph V Kosmoski; Eric J Ackerman; Michael J Smerdon
DNA repair of a single UV photoproduct in a designed nucleosome.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(18):10113-8.
2001: Vyacheslav A Bespalov; Antonio Conconi; X Zhang; Deirdre Fahy; Michael J Smerdon
Improved method for measuring the ensemble average of strand breaks in genomic DNA.
Environmental and molecular mutagenesis 2001;38(2-3):166-74.
2000: S Li; R Waters; Michael J Smerdon
Low- and high-resolution mapping of DNA damage at specific sites.
Methods (San Diego, Calif.) 2000;22(2):170-9.
2000: X Liu; Michael J Smerdon
Nucleotide excision repair of the 5 S ribosomal RNA gene assembled into a nucleosome.
The Journal of biological chemistry 2000;275(31):23729-35.
2000: Philip J Brooks; D S Wise; D A Berry; Joseph V Kosmoski; Michael J Smerdon; R L Somers; H Mackie; A Y Spoonde; Eric J Ackerman; K Coleman; Robert E Tarone; Jay H Robbins
The oxidative DNA lesion 8,5'-(S)-cyclo-2'-deoxyadenosine is repaired by the nucleotide excision repair pathway and blocks gene expression in mammalian cells.
The Journal of biological chemistry 2000;275(29):22355-62.
2000: Antonio Conconi; P Jager-Vottero; X Zhang; Brian C Beard; Michael J Smerdon
Mitotic viability and metabolic competence in UV-irradiated yeast cells.
Mutation research 2000;459(1):55-64.
2000: X Liu; D B Mann; C Suquet; D L Springer; Michael J Smerdon
Ultraviolet damage and nucleosome folding of the 5S ribosomal RNA gene.
Biochemistry 2000;39(3):557-66.
1999: Shisheng Li; Magdalena Livingstone-Zatchej; R Gupta; M Meijer; Fritz Thoma; Michael J Smerdon
Nucleotide excision repair in a constitutive and inducible gene of a yeast minichromosome in intact cells.
Nucleic acids research 1999;27(17):3610-20.
1999: Joseph V Kosmoski; Michael J Smerdon
Synthesis and nucleosome structure of DNA containing a UV photoproduct at a specific site.
Biochemistry 1999;38(29):9485-94.
1999: M Meijer; Michael J Smerdon
Accessing DNA damage in chromatin: insights from transcription.
BioEssays : news and reviews in molecular, cellular and developmental biology 1999;21(7):596-603.
1999: Shisheng Li; Michael J Smerdon
Base excision repair of N-methylpurines in a yeast minichromosome. Effects of transcription, dna sequence, and nucleosome positioning.
The Journal of biological chemistry 1999;274(18):12201-4.
1999: Antonio Conconi; X Liu; Lilia Koriazova; Eric J Ackerman; Michael J Smerdon
Tight correlation between inhibition of DNA repair in vitro and transcription factor IIIA binding in a 5S ribosomal RNA gene.
The EMBO journal 1999;18(5):1387-96.
1999: Michael J Smerdon; Antonio Conconi
Modulation of DNA damage and DNA repair in chromatin.
Progress in nucleic acid research and molecular biology 1999;62():227-55.
1997: X Liu; Antonio Conconi; Michael J Smerdon
Strand-specific modulation of UV photoproducts in 5S rDNA by TFIIIA binding and their effect on TFIIIA complex formation.
Biochemistry 1997;36(44):13710-7.
1997: D B Mann; D L Springer; Michael J Smerdon
DNA damage can alter the stability of nucleosomes: effects are dependent on damage type.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(6):2215-20.
1996: Antonio Conconi; Michael J Smerdon; Gregg A Howe; Clarence A Ryan
The octadecanoid signalling pathway in plants mediates a response to ultraviolet radiation.
Nature 1996;383(6603):826-9.
1996: L K Fritz; C Suquet; Michael J Smerdon
Strand breaks are repaired efficiently in human ribosomal genes.
The Journal of biological chemistry 1996;271(22):12972-6.
1996: J P Mueller; Michael J Smerdon
Rad23 is required for transcription-coupled repair and efficient overrall repair in Saccharomyces cerevisiae.
Molecular and cellular biology 1996;16(5):2361-8.
1995: L K Fritz; Michael J Smerdon
Repair of UV damage in actively transcribed ribosomal genes.
Biochemistry 1995;34(40):13117-24.
1995: J P Mueller; Michael J Smerdon
Repair of plasmid and genomic DNA in a rad7 delta mutant of yeast.
Nucleic acids research 1995;23(17):3457-64.
1995: X Liu; Michael J Smerdon
A slot blot method for detection of ultraviolet photoproducts in DNA.
Analytical biochemistry 1995;229(2):323-8.
1995: C Suquet; D L Mitchell; Michael J Smerdon
Repair of UV-induced (6-4) photoproducts in nucleosome core DNA.
The Journal of biological chemistry 1995;270(28):16507-9.
1995: A O Murad; J de Cock; D Brown; Michael J Smerdon
Variations in transcription-repair coupling in mouse cells.
The Journal of biological chemistry 1995;270(8):3949-57.
1994: D W Brown; L J Libertini; C Suquet; E W Small; Michael J Smerdon
Effects of nucleosome unfolding on the distribution of UV damage in DNA.
Annals of the New York Academy of Sciences 1994;726():292-4.
1994: Brian D Thrall; D B Mann; Michael J Smerdon; D L Springer
Nucleosome structure modulates benzo[a]pyrenediol epoxide adduct formation.
Biochemistry 1994;33(8):2210-6.
1993: C Suquet; Michael J Smerdon
UV damage to DNA strongly influences its rotational setting on the histone surface of reconstituted nucleosomes.
The Journal of biological chemistry 1993;268(32):23755-7.
1993: D W Brown; L J Libertini; C Suquet; E W Small; Michael J Smerdon
Unfolding of nucleosome cores dramatically changes the distribution of ultraviolet photoproducts in DNA.
Biochemistry 1993;32(40):10527-31.
1992: Brian D Thrall; D B Mann; Michael J Smerdon; D L Springer
DNA polymerase, RNA polymerase and exonuclease activities on a DNA sequence modified by benzo[a]pyrene diolepoxide.
Carcinogenesis 1992;13(9):1529-34.
1992: J C Huijzer; Michael J Smerdon
Characterization of biotinylated repair regions in reversibly permeabilized human fibroblasts.
Biochemistry 1992;31(21):5077-84.
1992: J Bedoyan; R Gupta; Fritz Thoma; Michael J Smerdon
Transcription, nucleosome stability, and DNA repair in a yeast minichromosome.
The Journal of biological chemistry 1992;267(9):5996-6005.
1992: Khalifah B. Sidik; Michael J Smerdon
Correlation between repair patch ligation and nucleosome rearrangement in human cells treated with bleomycin, UV radiation or methyl methanesulfonate.
Carcinogenesis 1992;13(1):135-8.
1991: Michael J Smerdon
DNA repair and the role of chromatin structure.
Current opinion in cell biology 1991;3(3):422-8.
1990: Khalifah B. Sidik; Michael J Smerdon
Nucleosome rearrangement in human cells following short patch repair of DNA damaged by bleomycin.
Biochemistry 1990;29(32):7501-11.
1990: K A Jensen; Michael J Smerdon
DNA repair within nucleosome cores of UV-irradiated human cells.
Biochemistry 1990;29(20):4773-82.
1990: Michael J Smerdon; Fritz Thoma
Site-specific DNA repair at the nucleosome level in a yeast minichromosome.
Cell 1990;61(4):675-84.
1990: Michael J Smerdon; J Bedoyan; Fritz Thoma
DNA repair in a small yeast plasmid folded into chromatin.
Nucleic acids research 1990;18(8):2045-51.
1990: James Gale; Michael J Smerdon
UV induced (6-4) photoproducts are distributed differently than cyclobutane dimers in nucleosomes.
Photochemistry and photobiology 1990;51(4):411-7.
1990: Khalifah B. Sidik; Michael J Smerdon
Bleomycin-induced DNA damage and repair in human cells permeabilized with lysophosphatidylcholine.
Cancer research 1990;50(5):1613-9.
1989: B Ramanathan; Michael J Smerdon
Enhanced DNA repair synthesis in hyperacetylated nucleosomes.
The Journal of biological chemistry 1989;264(19):11026-34.
1988: James Gale; Michael J Smerdon
Photofootprint of nucleosome core DNA in intact chromatin having different structural states.
Journal of molecular biology 1988;204(4):949-58.
1988: James Gale; Michael J Smerdon
UV-induced pyrimidine dimers and trimethylpsoralen cross-links do not alter chromatin folding in vitro.
Biochemistry 1988;27(19):7197-205.
1988: J D Lorenz; J F Watkins; Michael J Smerdon
Excision repair of UV damage in human fibroblasts reversibly permeabilized by lysolecithin.
Mutation research 1988;193(2):167-79.
1987: James Gale; K A Nissen; Michael J Smerdon
UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases.
Proceedings of the National Academy of Sciences of the United States of America 1987;84(19):6644-8.
1987: G E Arnold; A Keith Dunker; Michael J Smerdon
Limited nucleosome migration can completely randomize DNA repair patches in intact human cells.
Journal of molecular biology 1987;196(2):433-6.
1987: Khalifah B. Sidik; Michael J Smerdon
Rearrangement of nucleosome structure during excision repair in xeroderma pigmentosum (group A) human fibroblasts.
Carcinogenesis 1987;8(5):733-6.
1986: K A Nissen; S Y Lan; Michael J Smerdon
Stability of nucleosome placement in newly repaired regions of DNA.
The Journal of biological chemistry 1986;261(19):8585-8.
1986: B Ramanathan; Michael J Smerdon
Changes in nuclear protein acetylation in u.v.-damaged human cells.
Carcinogenesis 1986;7(7):1087-94.
1985: S Y Lan; Michael J Smerdon
A nonuniform distribution of excision repair synthesis in nucleosome core DNA.
Biochemistry 1985;24(26):7771-83.
1985: J F Watkins; Michael J Smerdon
Nucleosome rearrangement in vitro. 2. Formation of nucleosomes in newly repaired regions of DNA.
Biochemistry 1985;24(25):7288-95.
1985: J F Watkins; Michael J Smerdon
Nucleosome rearrangement in vitro. 1. Two phases of salt-induced nucleosome migration in nuclei.
Biochemistry 1985;24(25):7279-87.
1984: Khalifah B. Sidik; Michael J Smerdon
Nuclease sensitivity of repair-incorporated nucleotides in chromatin and nucleosome rearrangement in human cells damaged by methyl methanesulfonate and methylnitrosourea.
Carcinogenesis 1984;5(2):245-53.
1982: Michael J Smerdon; S Y Lan; R E Calza; R Reeves
Sodium butyrate stimulates DNA repair in UV-irradiated normal and xeroderma pigmentosum human fibroblasts.
The Journal of biological chemistry 1982;257(22):13441-7.
1982: Michael J Smerdon; J F Watkins; M W Lieberman
Effect of histone H1 removal on the distribution of ultraviolet-induced deoxyribonucleic acid repair synthesis within chromatin.
Biochemistry 1982;21(16):3879-85.