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Rolf Boelens

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Phenomena

Concepts & Ideas

Genes & Molecular Sequences

Amino Acid Sequence

Procedures

Biomolecular Nuclear Magnetic Resonance

Chemicals & Drugs

Living Beings

Escherichia coli

Physiology

Protein Folding

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Co-Publications
Name
117
Kaptein, Robert
32
Bonvin, Alexandre
12
Wechselberger, Rainer
12
Folkers, Gert
10
Hellingwerf, Klaas
9
Timmers, Th Marc
8
Gualerzi, Claudio
7
Kamerling, Johannis
7
Mulder, FA
7
Dekker, Nick
6
Díaz-Orejas, Ramón
6
Kalodimos, Charalampos
6
Spurio, Roberto
6
van der Saag, Paul
6
van Tilborg, PJ

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Publications

TOP 3
Sette Marco; Spurio Roberto; Trotta Edoardo; Brandizi Cinzia; Brandi Anna; Pon Cynthia L; Barbato Gaetano; Boelens Rolf; Gualerzi Claudio O
Sequence-specific recognition of DNA by the C-terminal domain of nucleoid-associated protein H-NS.
Romanuka Julija; van den Bulke Heidi; Kaptein Robert; Boelens Rolf; Folkers Gert E
Novel strategies to overcome expression problems encountered with toxic proteins: application to the production of Lac repressor proteins for NMR studies.
Romanuka Julija; Folkers Gert E; Biris Nikolaos; Tishchenko Evgeny; Wienk Hans; Bonvin Alexandre M J J; Kaptein Robert; Boelens Rolf
Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.

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All Publications

2009: Sette Marco; Spurio Roberto; Trotta Edoardo; Brandizi Cinzia; Brandi Anna; Pon Cynthia L; Barbato Gaetano; Boelens Rolf; Gualerzi Claudio O
Sequence-specific recognition of DNA by the C-terminal domain of nucleoid-associated protein H-NS.
The Journal of biological chemistry 2009;284(44):30453-62.
2009: Romanuka Julija; van den Bulke Heidi; Kaptein Robert; Boelens Rolf; Folkers Gert E
Novel strategies to overcome expression problems encountered with toxic proteins: application to the production of Lac repressor proteins for NMR studies.
Protein expression and purification 2009;67(2):104-12.
2009: Romanuka Julija; Folkers Gert E; Biris Nikolaos; Tishchenko Evgeny; Wienk Hans; Bonvin Alexandre M J J; Kaptein Robert; Boelens Rolf
Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
Journal of molecular biology 2009;390(3):478-89.
2009: Krzeminski Mickaël; Fuentes Gloria; Boelens Rolf; Bonvin Alexandre M J J
MINOES: a new approach to select a representative ensemble of structures in NMR studies of (partially) unfolded states. Application to Delta25-PYP.
Proteins 2009;74(4):895-904.
2009: Huang Anding; de Jong Rob N; Wienk Hans; Winkler G Sebastiaan; Timmers H Th Marc; Boelens Rolf
E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity.
Journal of molecular biology 2009;385(2):507-19.
2009: van Wijk Sjoerd J L; de Vries Sjoerd J; Kemmeren Patrick; Huang Anding; Boelens Rolf; Bonvin Alexandre M J J; Timmers H Th Marc
A comprehensive framework of E2-RING E3 interactions of the human ubiquitin-proteasome system.
Molecular systems biology 2009;5():295.
2008: van Ingen Hugo; van Schaik Frederik M A; Wienk Hans; Ballering Joost; Rehmann Holger; Dechesne Annemarie C; Kruijzer John A W; Liskamp Rob M J; Timmers H Th Marc; Boelens Rolf
Structural insight into the recognition of the H3K4me3 mark by the TFIID subunit TAF3.
Structure (London, England : 1993) 2008;16(8):1245-56.
2008: Blanchard Véronique; Gadkari Rupali A; George Albert V E; Roy Satarupa; Gerwig Gerrit J; Leeflang Bas R; Dighe Rajan R; Boelens Rolf; Kamerling Johannis P
High-level expression of biologically active glycoprotein hormones in Pichia pastoris strains--selection of strain GS115, and not X-33, for the production of biologically active N-glycosylated 15N-labeled phCG.
Glycoconjugate journal 2008;25(3):245-57.
2008: Blanchard Véronique; Frank Martin; Leeflang Bas R; Boelens Rolf; Kamerling Johannis P
The structural basis of the difference in sensitivity for PNGase F in the de-N-glycosylation of the native bovine pancreatic ribonucleases B and BS.
Biochemistry 2008;47(11):3435-46.
2008: Harper Shannon M; Wienk Hans; Wechselberger Rainer W; Bos Johannes L; Boelens Rolf; Rehmann Holger
Structural dynamics in the activation of Epac.
The Journal of biological chemistry 2008;283(10):6501-8.
2008: Das Devashish; Tripsianes Konstantinos; Jaspers Nicolaas G J; Hoeijmakers Jan H J; Kaptein Robert; Boelens Rolf; Folkers Gert E
The HhH domain of the human DNA repair protein XPF forms stable homodimers.
Proteins 2008;70(4):1551-63.
2007: Gauden Magdalena; Grinstead Jeffrey S; Laan Wouter; van Stokkum Ivo H M; Avila-Perez Marcela; Toh K C; Boelens Rolf; Kaptein Robert; van Grondelle Rienk; Hellingwerf Klaas J; Kennis John T M
On the role of aromatic side chains in the photoactivation of BLUF domains.
Biochemistry 2007;46(25):7405-15.
2007: van Dijk Aalt D J; Ciofi-Baffoni Simone; Banci Lucia; Bertini Ivano; Boelens Rolf; Bonvin Alexandre M J J
Modeling protein-protein complexes involved in the cytochrome C oxidase copper-delivery pathway.
Journal of proteome research 2007;6(4):1530-9.
2007: Kamphuis Monique B; Monti Maria Chiara; van den Heuvel Robert H H; Santos-Sierra Sandra; Folkers Gert E; Lemonnier Marc; Díaz-Orejas Ramón; Heck Albert J R; Boelens Rolf
Interactions between the toxin Kid of the bacterial parD system and the antitoxins Kis and MazE.
Proteins 2007;67(1):219-31.
2007: Tripsianes Konstantinos; Folkers Gert E; Zheng Chao; Das Devashish; Grinstead Jeffrey S; Kaptein Robert; Boelens Rolf
Analysis of the XPA and ssDNA-binding surfaces on the central domain of human ERCC1 reveals evidence for subfunctionalization.
Nucleic acids research 2007;35(17):5789-98.
2007: Monti Maria C; Hernández-Arriaga Ana M; Kamphuis Monique B; López-Villarejo Juan; Heck Albert J R; Boelens Rolf; Díaz-Orejas Ramón; van den Heuvel Robert H H
Interactions of Kid-Kis toxin-antitoxin complexes with the parD operator-promoter region of plasmid R1 are piloted by the Kis antitoxin and tuned by the stoichiometry of Kid-Kis oligomers.
Nucleic acids research 2007;35(5):1737-49.
2007: Kamphuis Monique B; Monti Maria Chiara; van den Heuvel Robert H H; López-Villarejo Juan; Díaz-Orejas Ramón; Boelens Rolf
Structure and function of bacterial kid-kis and related toxin-antitoxin systems.
Protein and peptide letters 2007;14(2):113-24.
2006: Grinstead Jeffrey S; Avila-Perez Marcela; Hellingwerf Klaas J; Boelens Rolf; Kaptein Robert
Light-induced flipping of a conserved glutamine sidechain and its orientation in the AppA BLUF domain.
Journal of the American Chemical Society 2006;128(47):15066-7.
2006: Milon Pohl; Tischenko Eugene; Tomsic Jerneja; Caserta Enrico; Folkers Gert; La Teana Anna; Rodnina Marina V; Pon Cynthia L; Boelens Rolf; Gualerzi Claudio O
The nucleotide-binding site of bacterial translation initiation factor 2 (IF2) as a metabolic sensor.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(38):13962-7.
2006: Tomaselli Simona; Crescenzi Orlando; Sanfelice Domenico; Ab Eiso; Wechselberger Rainer; Angeli Sergio; Scaloni Andrea; Boelens Rolf; Tancredi Teodorico; Pelosi Paolo; Picone Delia
Solution structure of a chemosensory protein from the desert locust Schistocerca gregaria.
Biochemistry 2006;45(35):10606-13.
2006: Sibille Nathalie; Favier Adrien; Azuaga Ana I; Ganshaw Grant; Bott Richard; Bonvin Alexandre M J J; Boelens Rolf; van Nuland Nico A J
Comparative NMR study on the impact of point mutations on protein stability of Pseudomonas mendocina lipase.
Protein science : a publication of the Protein Society 2006;15(8):1915-27.
2006: Salinas Roberto K; Diercks Tammo; Kaptein Robert; Boelens Rolf
Cooperative alpha-helix unfolding in a protein-DNA complex from hydrogen-deuterium exchange.
Protein science : a publication of the Protein Society 2006;15(7):1752-9.
2006: AB Eiso; Pugh David J R; Kaptein Robert; Boelens Rolf; Bonvin Alexandre M J J
Direct use of unassigned resonances in NMR structure calculations with proxy residues.
Journal of the American Chemical Society 2006;128(23):7566-71.
2006: van Dijk Aalt D J; Kaptein Robert; Boelens Rolf; Bonvin Alexandre M J J
Combining NMR relaxation with chemical shift perturbation data to drive protein-protein docking.
Journal of biomolecular NMR 2006;34(4):237-44.
2006: Jonker Hendrik R A; Wechselberger Rainer W; Boelens Rolf; Kaptein Rob; Folkers Gert E
The intrinsically unstructured domain of PC4 modulates the activity of the structured core through inter- and intramolecular interactions.
Biochemistry 2006;45(15):5067-81.
2006: Kamphuis Monique B; Bonvin Alexandre M J J; Monti Maria Chiara; Lemonnier Marc; Muñoz-Gómez Ana; van den Heuvel Robert H H; Díaz-Orejas Ramón; Boelens Rolf
Model for RNA binding and the catalytic site of the RNase Kid of the bacterial parD toxin-antitoxin system.
Journal of molecular biology 2006;357(1):115-26.
2006: Grinstead Jeffrey S; Hsu Shang-Te D; Laan Wouter; Bonvin Alexandre M J J; Hellingwerf Klaas J; Boelens Rolf; Kaptein Robert
The solution structure of the AppA BLUF domain: insight into the mechanism of light-induced signaling.
Chembiochem : a European journal of chemical biology 2006;7(1):187-93.
2006: van Dijk Marc; van Dijk Aalt D J; Hsu Victor; Boelens Rolf; Bonvin Alexandre M J J
Information-driven protein-DNA docking using HADDOCK: it is a matter of flexibility.
Nucleic acids research 2006;34(11):3317-25.
2005: Tripsianes Konstantinos; Folkers Gert; Ab Eiso; Das Devashish; Odijk Hanny; Jaspers Nicolaas G J; Hoeijmakers Jan H J; Kaptein Robert; Boelens Rolf
The structure of the human ERCC1/XPF interaction domains reveals a complementary role for the two proteins in nucleotide excision repair.
Structure (London, England : 1993) 2005;13(12):1849-58.
2005: Fuentes Gloria; Nederveen Aart J; Kaptein Robert; Boelens Rolf; Bonvin Alexandre M J J
Describing partially unfolded states of proteins from sparse NMR data.
Journal of biomolecular NMR 2005;33(3):175-86.
2005: Bonvin Alexandre M J J; Boelens Rolf; Kaptein Robert
NMR analysis of protein interactions.
Current opinion in chemical biology 2005;9(5):501-8.
2005: Kopke Salinas Roberto; Folkers Gert E; Bonvin Alexandre M J J; Das Devashish; Boelens Rolf; Kaptein Robert
Altered specificity in DNA binding by the lac repressor: a mutant lac headpiece that mimics the gal repressor.
Chembiochem : a European journal of chemical biology 2005;6(9):1628-37.
2005: Wienk Hans; Tomaselli Simona; Bernard Cédric; Spurio Roberto; Picone Delia; Gualerzi Claudio O; Boelens Rolf
Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2.
Protein science : a publication of the Protein Society 2005;14(9):2461-8.
2005: Bernard Cédric; Houben Klaartje; Derix Nocky M; Marks David; van der Horst Michael A; Hellingwerf Klaas J; Boelens Rolf; Kaptein Robert; van Nuland Nico A J
The solution structure of a transient photoreceptor intermediate: Delta25 photoactive yellow protein.
Structure (London, England : 1993) 2005;13(7):953-62.
2005: Houben Klaartje; Wasielewski Emeric; Dominguez Cyril; Kellenberger Esther; Atkinson R Andrew; Timmers H Th Marc; Kieffer Bruno; Boelens Rolf
Dynamics and metal exchange properties of C4C4 RING domains from CNOT4 and the p44 subunit of TFIIH.
Journal of molecular biology 2005;349(3):621-37.
2005: Kellenberger Esther; Dominguez Cyril; Fribourg Sébastien; Wasielewski Emeric; Moras Dino; Poterszman Arnaud; Boelens Rolf; Kieffer Bruno
Solution structure of the C-terminal domain of TFIIH P44 subunit reveals a novel type of C4C4 ring domain involved in protein-protein interactions.
The Journal of biological chemistry 2005;280(21):20785-92.
2005: van Dijk Aalt D J; Boelens Rolf; Bonvin Alexandre M J J
Data-driven docking for the study of biomolecular complexes.
The FEBS journal 2005;272(2):293-312.
2005: Jonker Hendrik R A; Wechselberger Rainer W; Boelens Rolf; Folkers Gert E; Kaptein Rob
Structural properties of the promiscuous VP16 activation domain.
Biochemistry 2005;44(3):827-39.
2004: Houben Klaartje; Dominguez Cyril; van Schaik Frederik M A; Timmers H Th Marc; Bonvin Alexandre M J J; Boelens Rolf
Solution structure of the ubiquitin-conjugating enzyme UbcH5B.
Journal of molecular biology 2004;344(2):513-26.
2004: Kalodimos Charalampos G; Boelens Rolf; Kaptein Robert
Toward an integrated model of protein-DNA recognition as inferred from NMR studies on the Lac repressor system.
Chemical reviews 2004;104(8):3567-86.
2004: Kalodimos Charalampos G; Biris Nikolaos; Bonvin Alexandre M J J; Levandoski Marc M; Guennuegues Marc; Boelens Rolf; Kaptein Robert
Structure and flexibility adaptation in nonspecific and specific protein-DNA complexes.
Science (New York, N.Y.) 2004;305(5682):386-9.
2004: Houben Klaartje; Boelens Rolf
Side chain dynamics monitored by 13C-13C cross-relaxation.
Journal of biomolecular NMR 2004;29(2):151-66.
2004: Durney Michael A; Wechselberger Rainer W; Kalodimos Charalampos G; Kaptein Robert; Vorgias Constantinos E; Boelens Rolf
An alternate conformation of the hyperthermostable HU protein from Thermotoga maritima has unexpectedly high flexibility.
FEBS letters 2004;563(1-3):49-54.
2004: Dominguez Cyril; Bonvin Alexandre M J J; Winkler G Sebastiaan; van Schaik Frederik M A; Timmers H Th Marc; Boelens Rolf
Structural model of the UbcH5B/CNOT4 complex revealed by combining NMR, mutagenesis, and docking approaches.
Structure (London, England : 1993) 2004;12(4):633-44.
2004: Winkler G Sebastiaan; Albert Thomas K; Dominguez Cyril; Legtenberg Yvonne I A; Boelens Rolf; Timmers H Th Marc
An altered-specificity ubiquitin-conjugating enzyme/ubiquitin-protein ligase pair.
Journal of molecular biology 2004;337(1):157-65.
2003: Derix Nocky M; Wechselberger Rainer W; van der Horst Michael A; Hellingwerf Klaas J; Boelens Rolf; Kaptein Rob; van Nuland Nico A J
Lack of negative charge in the E46Q mutant of photoactive yellow protein prevents partial unfolding of the blue-shifted intermediate.
Biochemistry 2003;42(49):14501-6.
2003: Koharudin Leonardus M I; Bonvin Alexandre M J J; Kaptein Robert; Boelens Rolf
Use of very long-distance NOEs in a fully deuterated protein: an approach for rapid protein fold determination.
Journal of magnetic resonance (San Diego, Calif. : 1997) 2003;163(2):228-35.
2003: Dominguez Cyril; Boelens Rolf; Bonvin Alexandre M J J
HADDOCK: a protein-protein docking approach based on biochemical or biophysical information.
Journal of the American Chemical Society 2003;125(7):1731-7.
2003: Feiters Martinus C; Eijkelenboom Astrid P A M; Nolting Hans Friedrich; Krebs Bernt; van den Ent Fusinita M I; Plasterk Ronald H A; Kaptein Robert; Boelens Rolf
X-ray absorption spectroscopic studies of zinc in the N-terminal domain of HIV-2 integrase and model compounds.
Journal of synchrotron radiation 2003;10(Pt 1):86-95.
2002: Singh S; Folkers G E; Bonvin A M J J; Boelens R; Wechselberger R; Niztayev A; Kaptein R
Solution structure and DNA-binding properties of the C-terminal domain of UvrC from E.coli.
The EMBO journal 2002;21(22):6257-66.
2002: Hargreaves David; Santos-Sierra Sandra; Giraldo Rafael; Sabariegos-Jareño Rosario; de la Cueva-Méndez Guillermo; Boelens Rolf; Díaz-Orejas Ramon; Rafferty John B
Structural and functional analysis of the kid toxin protein from E. coli plasmid R1.
Structure (London, England : 1993) 2002;10(10):1425-33.
2002: Kalodimos Charalampos G; Bonvin Alexandre M J J; Salinas Roberto K; Wechselberger Rainer; Boelens Rolf; Kaptein Robert
Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain.
The EMBO journal 2002;21(12):2866-76.
2002: Kalodimos Charalampos G; Boelens Rolf; Kaptein Robert
A residue-specific view of the association and dissociation pathway in protein--DNA recognition.
Nature structural biology 2002;9(3):193-7.
2002: Boelens R; Gualerzi C O
Structure and function of bacterial initiation factors.
Current protein & peptide science 2002;3(1):107-19.
2002: Albert Thomas K; Hanzawa Hiroyuki; Legtenberg Yvonne I A; de Ruwe Marjolein J; van den Heuvel Fiona A J; Collart Martine A; Boelens Rolf; Timmers H Th Marc
Identification of a ubiquitin-protein ligase subunit within the CCR4-NOT transcription repressor complex.
The EMBO journal 2002;21(3):355-64.
2002: Hargreaves David; Giraldo Rafael; Santos-Sierra Sandra; Boelens Rolf; Rice David W; Díaz Orejas Ramón; Rafferty John B
Crystallization and preliminary X-ray crystallographic studies on the parD-encoded protein Kid from Escherichia coli plasmid R1.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 2):355-8.
2001: Bonvin A M; Houben K; Guenneugues M; Kaptein R; Boelens R
Rapid protein fold determination using secondary chemical shifts and cross-hydrogen bond 15N-13C' scalar couplings (3hbJNC').
Journal of biomolecular NMR 2001;21(3):221-33.
2001: Kalodimos C G; Folkers G E; Boelens R; Kaptein R
Strong DNA binding by covalently linked dimeric Lac headpiece: evidence for the crucial role of the hinge helices.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(11):6039-44.
2001: Hanzawa H; de Ruwe M J; Albert T K; van Der Vliet P C; Timmers H T; Boelens R
The structure of the C4C4 ring finger of human NOT4 reveals features distinct from those of C3HC4 RING fingers.
The Journal of biological chemistry 2001;276(13):10185-90.
2000: Craven C J; Derix N M; Hendriks J; Boelens R; Hellingwerf K J; Kaptein R
Probing the nature of the blue-shifted intermediate of photoactive yellow protein in solution by NMR: hydrogen-deuterium exchange data and pH studies.
Biochemistry 2000;39(47):14392-9.
2000: Eijkelenboom A P; van den Ent F M; Wechselberger R; Plasterk R H; Kaptein R; Boelens R
Refined solution structure of the dimeric N-terminal HHCC domain of HIV-2 integrase.
Journal of biomolecular NMR 2000;18(2):119-28.
2000: Guenneugues M; Caserta E; Brandi L; Spurio R; Meunier S; Pon C L; Boelens R; Gualerzi C O
Mapping the fMet-tRNA(f)(Met) binding site of initiation factor IF2.
The EMBO journal 2000;19(19):5233-40.
2000: van Tilborg P J; Czisch M; Mulder F A; Folkers G E; Bonvin A M; Nair M; Boelens R; Kaptein R
Changes in dynamical behavior of the retinoid X receptor DNA-binding domain upon binding to a 14 base-pair DNA half site.
Biochemistry 2000;39(30):8747-57.
2000: Melacini G; Bonvin A M; Goodman M; Boelens R; Kaptein R
Hydration dynamics of the collagen triple helix by NMR.
Journal of molecular biology 2000;300(5):1041-9.
2000: Erbel P J; Karimi-Nejad Y; van Kuik J A; Boelens R; Kamerling J P; Vliegenthart J F
Effects of the N-linked glycans on the 3D structure of the free alpha-subunit of human chorionic gonadotropin.
Biochemistry 2000;39(20):6012-21.
2000: Meunier S; Spurio R; Czisch M; Wechselberger R; Guenneugues M; Gualerzi C O; Boelens R
Structure of the fMet-tRNA(fMet)-binding domain of B. stearothermophilus initiation factor IF2.
The EMBO journal 2000;19(8):1918-26.
1999: Spronk C A; Bonvin A M; Radha P K; Melacini G; Boelens R; Kaptein R
The solution structure of Lac repressor headpiece 62 complexed to a symmetrical lac operator.
Structure (London, England : 1993) 1999;7(12):1483-92.
1999: Melacini G; Boelens R; Kaptein R
Water-macromolecule interactions by NMR: a quadrature-free constant-time approach and its application to CI2.
Journal of biomolecular NMR 1999;15(3):189-201.
1999: Spronk C A; Folkers G E; Noordman A M; Wechselberger R; van den Brink N; Boelens R; Kaptein R
Hinge-helix formation and DNA bending in various lac repressor-operator complexes.
The EMBO journal 1999;18(22):6472-80.
1999: Mulder F A; Schipper D; Bott R; Boelens R
Altered flexibility in the substrate-binding site of related native and engineered high-alkaline Bacillus subtilisins.
Journal of molecular biology 1999;292(1):111-23.
1999: Eijkelenboom A P; Sprangers R; Hård K; Puras Lutzke R A; Plasterk R H; Boelens R; Kaptein R
Refined solution structure of the C-terminal DNA-binding domain of human immunovirus-1 integrase.
Proteins 1999;36(4):556-64.
1999: Nooren I M; Kaptein R; Sauer R T; Boelens R
The tetramerization domain of the Mnt repressor consists of two right-handed coiled coils.
Nature structural biology 1999;6(8):755-9.
1999: Nooren I M; Rietveld A W; Melacini G; Sauer R T; Kaptein R; Boelens R
The solution structure and dynamics of an Arc repressor mutant reveal premelting conformational changes related to DNA binding.
Biochemistry 1999;38(19):6035-42.
1999: Rubinstenn G; Vuister G W; Zwanenburg N; Hellingwerf K J; Boelens R; Kaptein R
NMR experiments for the study of photointermediates: application to the photoactive yellow protein.
Journal of magnetic resonance (San Diego, Calif. : 1997) 1999;137(2):443-7.
1999: Mulder F A; van Tilborg P J; Kaptein R; Boelens R
Microsecond time scale dynamics in the RXR DNA-binding domain from a combination of spin-echo and off-resonance rotating frame relaxation measurements.
Journal of biomolecular NMR 1999;13(3):275-88.
1999: Erbel P J; Karimi-Nejad Y; De Beer T; Boelens R; Kamerling J P; Vliegenthart J F
Solution structure of the alpha-subunit of human chorionic gonadotropin.
European journal of biochemistry / FEBS 1999;260(2):490-8.
1999: van Tilborg P J; Mulder F A; de Backer M M; Nair M; van Heerde E C; Folkers G; van der Saag P T; Karimi-Nejad Y; Boelens R; Kaptein R
Millisecond to microsecond time scale dynamics of the retinoid X and retinoic acid receptor DNA-binding domains and dimeric complex formation.
Biochemistry 1999;38(7):1951-6.
1999: Melacini G; Kaptein R; Boelens R
Editing of chemical exchange-relayed NOEs in NMR experiments for the observation of protein-water interactions.
Journal of magnetic resonance (San Diego, Calif. : 1997) 1999;136(2):214-8.
1999: Werten S; Wechselberger R; Boelens R; van der Vliet P C; Kaptein R
Identification of the single-stranded DNA binding surface of the transcriptional coactivator PC4 by NMR.
The Journal of biological chemistry 1999;274(6):3693-9.
1999: Sette M; Spurio R; van Tilborg P; Gualerzi C O; Boelens R
Identification of the ribosome binding sites of translation initiation factor IF3 by multidimensional heteronuclear NMR spectroscopy.
RNA (New York, N.Y.) 1999;5(1):82-92.
1998: Czisch M; Boelens R
Sensitivity enhancement in the TROSY experiment.
Journal of magnetic resonance (San Diego, Calif. : 1997) 1998;134(1):158-60.
1998: Düx P; Rubinstenn G; Vuister G W; Boelens R; Mulder F A; Hård K; Hoff W D; Kroon A R; Crielaard W; Hellingwerf K J; Kaptein R
Solution structure and backbone dynamics of the photoactive yellow protein.
Biochemistry 1998;37(37):12689-99.
1998: Rubinstenn G; Vuister G W; Mulder F A; Düx P E; Boelens R; Hellingwerf K J; Kaptein R
Structural and dynamic changes of photoactive yellow protein during its photocycle in solution.
Nature structural biology 1998;5(7):568-70.
1998: van Zuylen C W; de Beer T; Leeflang B R; Boelens R; Kaptein R; Kamerling J P; Vliegenthart J F
Mobilities of the inner three core residues and the Man(alpha 1--6) branch of the glycan at Asn78 of the alpha-subunit of human chorionic gonadotropin are restricted by the protein.
Biochemistry 1998;37(7):1933-40.
1997: Eijkelenboom A P; van den Ent F M; Vos A; Doreleijers J F; Hård K; Tullius T D; Plasterk R H; Kaptein R; Boelens R
The solution structure of the amino-terminal HHCC domain of HIV-2 integrase: a three-helix bundle stabilized by zinc.
Current biology : CB 1997;7(10):739-46.
1997: Martin J R; Mulder F A; Karimi-Nejad Y; van der Zwan J; Mariani M; Schipper D; Boelens R
The solution structure of serine protease PB92 from Bacillus alcalophilus presents a rigid fold with a flexible substrate-binding site.
Structure (London, England : 1993) 1997;5(4):521-32.
1997: Sette M; van Tilborg P; Spurio R; Kaptein R; Paci M; Gualerzi C O; Boelens R
The structure of the translational initiation factor IF1 from E.coli contains an oligomer-binding motif.
The EMBO journal 1997;16(6):1436-43.
1997: Slijper M; Boelens R; Davis A L; Konings R N; van der Marel G A; van Boom J H; Kaptein R
Backbone and side chain dynamics of lac repressor headpiece (1-56) and its complex with DNA.
Biochemistry 1997;36(1):249-54.
1996: Doreleijers J F; Langedijk J P; Hård K; Boelens R; Rullmann J A; Schaaper W M; van Oirschot J T; Kaptein R
Solution structure of the immunodominant region of protein G of bovine respiratory syncytial virus.
Biochemistry 1996;35(47):14684-8.
1996: van Geerestein-Ujah E C; Mariani M; Vis H; Boelens R; Kaptein R
Use of graph theory for secondary structure recognition and sequential assignment in heteronuclear (13C, 15N) NMR spectra: application to HU protein from Bacillus stearothermophilus.
Biopolymers 1996;39(5):691-707.
1996: De Beer T; Van Zuylen C W; Leeflang B R; Hård K; Boelens R; Kaptein R; Kamerling J P; Vliegenthart J F
NMR studies of the free alpha subunit of human chorionic gonadotropin. Structural influences of N-glycosylation and the beta subunit on the conformation of the alpha subunit.
European journal of biochemistry / FEBS 1996;241(1):229-42.
1996: Slijper M; Bonvin A M; Boelens R; Kaptein R
Refined structure of lac repressor headpiece (1-56) determined by relaxation matrix calculations from 2D and 3D NOE data: change of tertiary structure upon binding to the lac operator.
Journal of molecular biology 1996;259(4):761-73.
1996: Slijper M; Kaptein R; Boelens R
Simultaneous 13C and 15N isotope editing of biomolecular complexes. Application to a mutant lac repressor headpiece DNA complex.
Journal of magnetic resonance. Series B 1996;111(2):199-203.
1996: Boelens R; Vis H; Vorgias C E; Wilson K S; Kaptein R
Structure and dynamics of the DNA binding protein HU from Bacillus stearothermophilus by NMR spectroscopy.
Biopolymers 1996;40(5):553-9.
1995: Kaptein R; Slijper M; Boelens R
Structure and dynamics of the lac repressor-operator complex as determined by NMR.
Toxicology letters 1995;82-83():591-9.
1995: Vis H; Mariani M; Vorgias C E; Wilson K S; Kaptein R; Boelens R
Solution structure of the HU protein from Bacillus stearothermophilus.
Journal of molecular biology 1995;254(4):692-703.
1995: van den Berg B; Tessari M; de Haas G H; Verheij H M; Boelens R; Kaptein R
Solution structure of porcine pancreatic phospholipase A2.
The EMBO journal 1995;14(17):4123-31.
1995: Eijkelenboom A P; Lutzke R A; Boelens R; Plasterk R H; Kaptein R; Hård K
The DNA-binding domain of HIV-1 integrase has an SH3-like fold.
Nature structural biology 1995;2(9):807-10.
1995: Chupin V; Killian J A; Breg J; de Jongh H H; Boelens R; Kaptein R; de Kruijff B
PhoE signal peptide inserts into micelles as a dynamic helix-break-helix structure, which is modulated by the environment. A two-dimensional 1H NMR study.
Biochemistry 1995;34(36):11617-24.
1995: van Geerestein-Ujah E C; Slijper M; Boelens R; Kaptein R
Graph-theoretical assignment of secondary structure in multidimensional protein NMR spectra: application to the lac repressor headpiece.
Journal of biomolecular NMR 1995;6(1):67-78.
1995: Cox M; van Tilborg P J; de Laat W; Boelens R; van Leeuwen H C; van der Vliet P C; Kaptein R
Solution structure of the Oct-1 POU homeodomain determined by NMR and restrained molecular dynamics.
Journal of biomolecular NMR 1995;6(1):23-32.
1995: van den Berg B; Tessari M; Boelens R; Dijkman R; de Haas G H; Kaptein R; Verheij H M
NMR structures of phospholipase A2 reveal conformational changes during interfacial activation.
Nature structural biology 1995;2(5):402-6.
1995: Fogh R H; Schipper D; Boelens R; Kaptein R
Complete 1H, 13C and 15N NMR assignments and secondary structure of the 269-residue serine protease PB92 from Bacillus alcalophilus.
Journal of biomolecular NMR 1995;5(3):259-70.
1995: van Tilborg M A; Bonvin A M; Hård K; Davis A L; Maler B; Boelens R; Yamamoto K R; Kaptein R
Structure refinement of the glucocorticoid receptor-DNA binding domain from NMR data by relaxation matrix calculations.
Journal of molecular biology 1995;247(4):689-700.
1995: Knegtel R M; Fogh R H; Ottleben G; Rüterjans H; Dumoulin P; Schnarr M; Boelens R; Kaptein R
A model for the LexA repressor DNA complex.
Proteins 1995;21(3):226-36.
1995: Breg J N; Sarda L; Cozzone P J; Rugani N; Boelens R; Kaptein R
Solution structure of porcine pancreatic procolipase as determined from 1H homonuclear two-dimensional and three-dimensional NMR.
European journal of biochemistry / FEBS 1995;227(3):663-72.
1995: van den Berg B; Tessari M; Boelens R; Dijkman R; Kaptein R; de Haas G H; Verheij H M
Solution structure of porcine pancreatic phospholipase A2 complexed with micelles and a competitive inhibitor.
Journal of biomolecular NMR 1995;5(2):110-21.
1995: Burgering M J; Hald M; Boelens R; Breg J N; Kaptein R
Hydrogen exchange studies of the Arc repressor: evidence for a monomeric folding intermediate.
Biopolymers 1995;35(2):217-26.
1995: Kaptein R; Boelens R; Chuprina V P; Rullmann J A; Slijper M
NMR and nucleic acid-protein interactions: the lac repressor-operator system.
Methods in enzymology 1995;261():513-24.
1995: Knegtel R M; van Tilborg M A; Boelens R; Kaptein R
NMR structural studies on the zinc finger domains of nuclear hormone receptors.
EXS 1995;73():279-95.
1994: Burgering M J; Boelens R; Gilbert D E; Breg J N; Knight K L; Sauer R T; Kaptein R
Solution structure of dimeric Mnt repressor (1-76).
Biochemistry 1994;33(50):15036-45.
1994: Vis H; Boelens R; Mariani M; Stroop R; Vorgias C E; Wilson K S; Kaptein R
1H, 13C, and 15N resonance assignments and secondary structure analysis of the HU protein from Bacillus stearothermophilus using two- and three-dimensional double- and triple-resonance heteronuclear magnetic resonance spectroscopy.
Biochemistry 1994;33(49):14858-70.
1994: Holm L; Sander C; Rüterjans H; Schnarr M; Fogh R; Boelens R; Kaptein R
LexA repressor and iron uptake regulator from Escherichia coli: new members of the CAP-like DNA binding domain superfamily.
Protein engineering 1994;7(12):1449-53.
1994: Hoff W D; Düx P; Hård K; Devreese B; Nugteren-Roodzant I M; Crielaard W; Boelens R; Kaptein R; van Beeumen J; Hellingwerf K J
Thiol ester-linked p-coumaric acid as a new photoactive prosthetic group in a protein with rhodopsin-like photochemistry.
Biochemistry 1994;33(47):13959-62.
1994: Fogh R H; Ottleben G; Rüterjans H; Schnarr M; Boelens R; Kaptein R
Solution structure of the LexA repressor DNA binding domain determined by 1H NMR spectroscopy.
The EMBO journal 1994;13(17):3936-44.
1994: de Beer T; van Zuylen C W; Hård K; Boelens R; Kaptein R; Kamerling J P; Vliegenthart J F
Rapid and simple approach for the NMR resonance assignment of the carbohydrate chains of an intact glycoprotein. Application of gradient-enhanced natural abundance 1H-13C HSQC and HSQC-TOCSY to the alpha-subunit of human chorionic gonadotropin.
FEBS letters 1994;348(1):1-6.
1994: Knegtel R M; Boelens R; Kaptein R
Monte Carlo docking of protein-DNA complexes: incorporation of DNA flexibility and experimental data.
Protein engineering 1994;7(6):761-7.
1994: Bonvin A M; Vis H; Breg J N; Burgering M J; Boelens R; Kaptein R
Nuclear magnetic resonance solution structure of the Arc repressor using relaxation matrix calculations.
Journal of molecular biology 1994;236(1):328-41.
1994: Knegtel R M; Antoon J; Rullmann C; Boelens R; Kaptein R
MONTY: a Monte Carlo approach to protein-DNA recognition.
Journal of molecular biology 1994;235(1):318-24.
1993: Chuprina V P; Rullmann J A; Lamerichs R M; van Boom J H; Boelens R; Kaptein R
Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
Journal of molecular biology 1993;234(2):446-62.
1993: Burgering M J; Boelens R; Caffrey M; Breg J N; Kaptein R
Observation of inter-subunit nuclear Overhauser effects in a dimeric protein. Application to the Arc repressor.
FEBS letters 1993;330(1):105-9.
1993: Cox M; Dekker N; Boelens R; Verrijzer C P; van der Vliet P C; Kaptein R
NMR studies of the POU-specific DNA-binding domain of Oct-1: sequential 1H and 15N assignments and secondary structure.
Biochemistry 1993;32(23):6032-40.
1993: Knegtel R M; Boelens R; Ganadu M L; George A V; Katahira M; Bonvin A M; Eib D; van der Saag P T; Kaptein R
NMR studies of the human retinoic acid receptor-beta DNA-binding domain. Metal coordination and three-dimensional structure.
Annals of the New York Academy of Sciences 1993;684():49-62.
1993: Dekker N; Cox M; Boelens R; Verrijzer C P; van der Vliet P C; Kaptein R
Solution structure of the POU-specific DNA-binding domain of Oct-1.
Nature 1993;362(6423):852-5.
1993: Bonvin A M; Rullmann J A; Lamerichs R M; Boelens R; Kaptein R
"Ensemble" iterative relaxation matrix approach: a new NMR refinement protocol applied to the solution structure of crambin.
Proteins 1993;15(4):385-400.
1993: Knegtel R M; Boelens R; Ganadu M L; George A V; van der Saag P T; Kaptein R
Heteronuclear 113Cd-1H NMR study of metal coordination in the human retinoic acid receptor-beta DNA binding domain.
Biochemical and biophysical research communications 1993;192(2):492-8.
1993: Knegtel R M; Katahira M; Schilthuis J G; Bonvin A M; Boelens R; Eib D; van der Saag P T; Kaptein R
The solution structure of the human retinoic acid receptor-beta DNA-binding domain.
Journal of biomolecular NMR 1993;3(1):1-17.
1992: Peters A R; Dekker N; van den Berg L; Boelens R; Kaptein R; Slotboom A J; de Haas G H
Conformational changes in phospholipase A2 upon binding to micellar interfaces in the absence and presence of competitive inhibitors. A 1H and 15N NMR study.
Biochemistry 1992;31(41):10024-30.
1992: Peters A R; Dekker N; van den Berg L; Boelens R; Slotboom A J; de Haas G H; Kaptein R
NMR studies of interactions between inhibitors and porcine pancreatic phospholipase A2.
Biochimie 1992;74(9-10):859-66.
1992: Katahira M; Knegtel R M; Boelens R; Eib D; Schilthuis J G; van der Saag P T; Kaptein R
Homo- and heteronuclear NMR studies of the human retinoic acid receptor beta DNA-binding domain: sequential assignments and identification of secondary structure elements.
Biochemistry 1992;31(28):6474-80.
1992: de Waard P; Leeflang B R; Vliegenthart J F; Boelens R; Vuister G W; Kaptein R
Application of 2D and 3D NMR experiments to the conformational study of a diantennary oligosaccharide.
Journal of biomolecular NMR 1992;2(3):211-26.
1992: Kellenbach E R; Remerowski M L; Eib D; Boelens R; van der Marel G A; van den Elst H; van Boom J H; Kaptein R
Synthesis of isotope labeled oligonucleotides and their use in an NMR study of a protein-DNA complex.
Nucleic acids research 1992;20(4):653-7.
1992: Katahira M; Knegtel R; Schilthius J; Boelens R; Eib D; van der Saag P; Kaptein R
The structure of the human retinoic acid receptor-beta DNA-binding domain determined by NMR.
Nucleic acids symposium series 1992;(27):65-6.
1991: Knegtel R M; Boelens R; Ganadu M L; Kaptein R
The solution structure of a monomeric insulin. A two-dimensional 1H-NMR study of des-(B26-B30)-insulin in combination with distance geometry and restrained molecular dynamics.
European journal of biochemistry / FEBS 1991;202(2):447-58.
1991: Remerowski M L; Kellenbach E; Boelens R; van der Marel G A; van Boom J H; Maler B A; Yamamoto K R; Kaptein R
1H NMR studies of DNA recognition by the glucocorticoid receptor: complex of the DNA binding domain with a half-site response element.
Biochemistry 1991;30(50):11620-4.
1991: Vuister G W; Boelens R; Padilla A; Kaptein R
Statistical analysis of double NOE transfer pathways in proteins as measured in 3D NOE-NOE spectroscopy.
Journal of biomolecular NMR 1991;1(4):421-38.
1991: Kellenbach E; Maler B A; Yamamoto K R; Boelens R; Kaptein R
Identification of the metal coordinating residues in the DNA binding domain of the glucocorticoid receptor by 113Cd-1H heteronuclear NMR spectroscopy.
FEBS letters 1991;291(2):367-70.
1991: Bonvin A M; Boelens R; Kaptein R
Direct NOE refinement of biomolecular structures using 2D NMR data.
Journal of biomolecular NMR 1991;1(3):305-9.
1991: Dekker N; Peters A R; Slotboom A J; Boelens R; Kaptein R; Dijkman R; de Haas G
Two-dimensional 1H-NMR studies of phospholipase-A2-inhibitor complexes bound to a micellar lipid-water interface.
European journal of biochemistry / FEBS 1991;199(3):601-7.
1991: Kleywegt G J; Boelens R; Cox M; Llinás M; Kaptein R
Computer-assisted assignment of 2D 1H NMR spectra of proteins: basic algorithms and application to phoratoxin B.
Journal of biomolecular NMR 1991;1(1):23-47.
1991: Kellenbach E; Härd T; Boelens R; Dahlman K; Carlstedt-Duke J; Gustafsson J A; van der Marel G A; van Boom J H; Maler B; Yamamoto K R
Photo-CIDNP study of the interaction between the glucocorticoid receptor DNA-binding domain and glucocorticoid response elements.
Journal of biomolecular NMR 1991;1(1):105-10.
1991: Koning T M; Boelens R; van der Marel G A; van Boom J H; Kaptein R
Structure determination of a DNA octamer in solution by NMR spectroscopy. Effect of fast local motions.
Biochemistry 1991;30(15):3787-97.
1991: Dekker N; Peters A R; Slotboom A J; Boelens R; Kaptein R; de Haas G
Porcine pancreatic phospholipase A2: sequence-specific 1H and 15N NMR assignments and secondary structure.
Biochemistry 1991;30(12):3135-46.
1990: Lamerichs R M; Boelens R; Van der Marel G A; Van Boom J H; Kaptein R
Assignment of the 1H-NMR spectrum of a lac repressor headpiece-operator complex in H2O and identification of NOEs. Consequences for protein-DNA interaction.
European journal of biochemistry / FEBS 1990;194(2):629-37.
1990: Härd T; Kellenbach E; Boelens R; Kaptein R; Dahlman K; Carlstedt-Duke J; Freedman L P; Maler B A; Hyde E I; Gustafsson J A
1H NMR studies of the glucocorticoid receptor DNA-binding domain: sequential assignments and identification of secondary structure elements.
Biochemistry 1990;29(38):9015-23.
1990: Breg J N; van Opheusden J H; Burgering M J; Boelens R; Kaptein R
Structure of Arc repressor in solution: evidence for a family of beta-sheet DNA-binding proteins.
Nature 1990;346(6284):586-9.
1990: Kaptein R; Lamerichs R M; Boelens R; Rullmann J A
Two-dimensional NMR study of a protein-DNA complex. lac repressor headpiece-operator interaction.
Biochemical pharmacology 1990;40(1):89-96.
1990: Boelens R; Ganadu M L; Verheyden P; Kaptein R
Two-dimensional NMR studies on des-pentapeptide-insulin. Proton resonance assignments and secondary structure analysis.
European journal of biochemistry / FEBS 1990;191(1):147-53.
1990: Härd T; Kellenbach E; Boelens R; Maler B A; Dahlman K; Freedman L P; Carlstedt-Duke J; Yamamoto K R; Gustafsson J A; Kaptein R
Solution structure of the glucocorticoid receptor DNA-binding domain.
Science (New York, N.Y.) 1990;249(4965):157-60.
1990: Vuister G W; Boelens R; Padilla A; Kleywegt G J; Kaptein R
Assignment strategies in homonuclear three-dimensional 1H NMR spectra of proteins.
Biochemistry 1990;29(7):1829-39.
1989: Breg J N; Boelens R; George A V; Kaptein R
Sequence-specific 1H NMR assignment and secondary structure of the Arc repressor of bacteriophage P22, as determined by two-dimensional 1H NMR spectroscopy.
Biochemistry 1989;28(25):9826-33.
1989: Lamerichs R M; Padilla A; Boelens R; Kaptein R; Ottleben G; Rüterjans H; Granger-Schnarr M; Oertel P; Schnarr M
The amino-terminal domain of LexA repressor is alpha-helical but differs from canonical helix-turn-helix proteins: a two-dimensional 1H NMR study.
Proceedings of the National Academy of Sciences of the United States of America 1989;86(18):6863-7.
1989: Fisher J; Primrose W U; Roberts G C; Dekker N; Boelens R; Kaptein R; Slotboom A J
1H NMR studies of bovine and porcine phospholipase A2: assignment of aromatic resonances and evidence for a conformational equilibrium in solution.
Biochemistry 1989;28(14):5939-46.
1989: Lamerichs R M; Boelens R; van der Marel G A; van Boom J H; Kaptein R; Buck F; Fera B; Rüterjans H
H NMR study of a complex between the lac repressor headpiece and a 22 base pair symmetric lac operator.
Biochemistry 1989;28(7):2985-91.
1988: Kaptein R; Boelens R; Scheek R M; van Gunsteren W F
Protein structures from NMR.
Biochemistry 1988;27(15):5389-95.
1988: Lamerichs R M; Berliner L J; Boelens R; De Marco A; Llinàs M; Kaptein R
Secondary structure and hydrogen bonding of crambin in solution. A two-dimensional NMR study.
European journal of biochemistry / FEBS 1988;171(1-2):307-12.
1988: Boelens R; Lamerichs R M; Rullmann J A; van Boom J H; Kaptein R
The interaction of lac repressor headpiece with its operator: an NMR view.
Protein sequences & data analysis 1988;1(6):487-98.

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