Dieter Söll

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Alkalaeva Elena; Eliseev Boris; Ambrogelly Alexandre; Vlasov Peter; Kondrashov Fyodor A; Gundllapalli Sharath; Frolova Lyudmila; Söll Dieter; Kisselev Lev
Translation termination in pyrrolysine-utilizing archaea.
Araiso Yuhei; Sherrer R Lynn; Ishitani Ryuichiro; Ho Joanne M L; Söll Dieter; Nureki Osamu
Structure of a tRNA-dependent kinase essential for selenocysteine decoding.
Mitchell Michelle; Xue Song; Erdman Rachel; Randau Lennart; Söll Dieter; Li Hong
Crystal structure and assembly of the functional Nanoarchaeum equitans tRNA splicing endonuclease.

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All Publications

2009: Alkalaeva Elena; Eliseev Boris; Ambrogelly Alexandre; Vlasov Peter; Kondrashov Fyodor A; Gundllapalli Sharath; Frolova Lyudmila; Söll Dieter; Kisselev Lev
Translation termination in pyrrolysine-utilizing archaea.
FEBS letters 2009;583(21):3455-60.
2009: Araiso Yuhei; Sherrer R Lynn; Ishitani Ryuichiro; Ho Joanne M L; Söll Dieter; Nureki Osamu
Structure of a tRNA-dependent kinase essential for selenocysteine decoding.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(38):16215-20.
2009: Mitchell Michelle; Xue Song; Erdman Rachel; Randau Lennart; Söll Dieter; Li Hong
Crystal structure and assembly of the functional Nanoarchaeum equitans tRNA splicing endonuclease.
Nucleic acids research 2009;37(17):5793-802.
2009: Alfonzo Juan D; Söll Dieter
Mitochondrial tRNA import--the challenge to understand has just begun.
Biological chemistry 2009;390(8):717-22.
2009: Wu Jing; Bu Weishu; Sheppard Kelly; Kitabatake Makoto; Kwon Suk-Tae; Söll Dieter; Smith Janet L
Insights into tRNA-dependent amidotransferase evolution and catalysis from the structure of the Aquifex aeolicus enzyme.
Journal of molecular biology 2009;391(4):703-16.
2009: Palioura Sotiria; Sherrer R Lynn; Steitz Thomas A; Söll Dieter; Simonovic Miljan
The human SepSecS-tRNASec complex reveals the mechanism of selenocysteine formation.
Science (New York, N.Y.) 2009;325(5938):321-5.
2009: Charrière Fabien; O'Donoghue Patrick; Helgadóttir Sunna; Maréchal-Drouard Laurence; Cristodero Marina; Horn Elke K; Söll Dieter; Schneider André
Dual targeting of a tRNAAsp requires two different aspartyl-tRNA synthetases in Trypanosoma brucei.
The Journal of biological chemistry 2009;284(24):16210-7.
2009: Randau Lennart; Stanley Bradford J; Kohlway Andrew; Mechta Sarah; Xiong Yong; Söll Dieter
A cytidine deaminase edits C to U in transfer RNAs in Archaea.
Science (New York, N.Y.) 2009;324(5927):657-9.
2009: Aeby Eric; Palioura Sotiria; Pusnik Mascha; Marazzi Janine; Lieberman Allyson; Ullu Elisabetta; Söll Dieter; Schneider André
The canonical pathway for selenocysteine insertion is dispensable in Trypanosomes.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(13):5088-92.
2009: Nozawa Kayo; O'Donoghue Patrick; Gundllapalli Sarath; Araiso Yuhei; Ishitani Ryuichiro; Umehara Takuya; Söll Dieter; Nureki Osamu
Pyrrolysyl-tRNA synthetase-tRNA(Pyl) structure reveals the molecular basis of orthogonality.
Nature 2009;457(7233):1163-7.
2009: Su Dan; Hohn Michael J; Palioura Sotiria; Sherrer R Lynn; Yuan Jing; Söll Dieter; O'Donoghue Patrick
How an obscure archaeal gene inspired the discovery of selenocysteine biosynthesis in humans.
IUBMB life 2009;61(1):35-9.
2008: Ruan Benfang; Palioura Sotiria; Sabina Jeffrey; Marvin-Guy Laure; Kochhar Sunil; Larossa Robert A; Söll Dieter
Quality control despite mistranslation caused by an ambiguous genetic code.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(43):16502-7.
2008: Gundllapalli Sarath; Ambrogelly Alexandre; Umehara Takuya; Li Darrick; Polycarpo Carla; Söll Dieter
Misacylation of pyrrolysine tRNA in vitro and in vivo.
FEBS letters 2008;582(23-24):3353-8.
2008: Yuan Jing; Sheppard Kelly; Söll Dieter
Amino acid modifications on tRNA.
Acta biochimica et biophysica Sinica 2008;40(7):539-53.
2008: Rubio Mary Anne T; Rinehart Jesse J; Krett Bethany; Duvezin-Caubet Stéphane; Reichert Andreas S; Söll Dieter; Alfonzo Juan D
Mammalian mitochondria have the innate ability to import tRNAs by a mechanism distinct from protein import.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(27):9186-91.
2008: Randau Lennart; Söll Dieter
Transfer RNA genes in pieces.
EMBO reports 2008;9(7):623-8.
2008: Randau Lennart; Schröder Imke; Söll Dieter
Life without RNase P.
Nature 2008;453(7191):120-3.
2008: RajBhandary Uttam L; Söll Dieter
Aminoacyl-tRNAs, the bacterial cell envelope, and antibiotics.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(14):5285-6.
2008: Sherrer R Lynn; Ho Joanne M L; Söll Dieter
Divergence of selenocysteine tRNA recognition by archaeal and eukaryotic O-phosphoseryl-tRNASec kinase.
Nucleic acids research 2008;36(6):1871-80.
2008: Sheppard Kelly; Yuan Jing; Hohn Michael J; Jester Brian; Devine Kevin M; Söll Dieter
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
Nucleic acids research 2008;36(6):1813-25.
2008: Sheppard Kelly; Sherrer R Lynn; Söll Dieter
Methanothermobacter thermautotrophicus tRNA Gln confines the amidotransferase GatCAB to asparaginyl-tRNA Asn formation.
Journal of molecular biology 2008;377(3):845-53.
2008: Sheppard Kelly; Söll Dieter
On the evolution of the tRNA-dependent amidotransferases, GatCAB and GatDE.
Journal of molecular biology 2008;377(3):831-44.
2008: Hendrickson Erik L; Liu Yuchen; Rosas-Sandoval Guillermina; Porat Iris; Söll Dieter; Whitman William B; Leigh John A
Global responses of Methanococcus maripaludis to specific nutrient limitations and growth rate.
Journal of bacteriology 2008;190(6):2198-205.
2008: Sherrer R Lynn; O'Donoghue Patrick; Söll Dieter
Characterization and evolutionary history of an archaeal kinase involved in selenocysteinyl-tRNA formation.
Nucleic acids research 2008;36(4):1247-59.
2008: Araiso Yuhei; Palioura Sotiria; Ishitani Ryuichiro; Sherrer R Lynn; O'Donoghue Patrick; Yuan Jing; Oshikane Hiroyuki; Domae Naoshi; Defranco Julian; Söll Dieter; Nureki Osamu
Structural insights into RNA-dependent eukaryal and archaeal selenocysteine formation.
Nucleic acids research 2008;36(4):1187-99.
2008: Sheppard Kelly; Akochy Pierre-Marie; Söll Dieter
Assays for transfer RNA-dependent amino acid biosynthesis.
Methods (San Diego, Calif.) 2008;44(2):139-45.
2007: Namy Olivier; Zhou Yu; Gundllapalli Sarath; Polycarpo Carla R; Denise Alain; Rousset Jean-Pierre; Söll Dieter; Ambrogelly Alexandre
Adding pyrrolysine to the Escherichia coli genetic code.
FEBS letters 2007;581(27):5282-8.
2007: Levengood Jeffrey D; Roy Hervé; Ishitani Ryuichiro; Söll Dieter; Nureki Osamu; Ibba Michael
Anticodon recognition and discrimination by the alpha-helix cage domain of class I lysyl-tRNA synthetase.
Biochemistry 2007;46(39):11033-8.
2007: Kavran Jennifer M; Gundllapalli Sarath; O'Donoghue Patrick; Englert Markus; Söll Dieter; Steitz Thomas A
Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(27):11268-73.
2007: Herring Stephanie; Ambrogelly Alexandre; Gundllapalli Sarath; O'Donoghue Patrick; Polycarpo Carla R; Söll Dieter
The amino-terminal domain of pyrrolysyl-tRNA synthetase is dispensable in vitro but required for in vivo activity.
FEBS letters 2007;581(17):3197-203.
2007: Sheppard Kelly; Akochy Pierre-Marie; Salazar Juan C; Söll Dieter
The Helicobacter pylori amidotransferase GatCAB is equally efficient in glutamine-dependent transamidation of Asp-tRNAAsn and Glu-tRNAGln.
The Journal of biological chemistry 2007;282(16):11866-73.
2007: Ambrogelly Alexandre; Gundllapalli Sarath; Herring Stephanie; Polycarpo Carla; Frauer Carina; Söll Dieter
Pyrrolysine is not hardwired for cotranslational insertion at UAG codons.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(9):3141-6.
2007: Kamtekar Satwik; Hohn Michael J; Park Hee-Sung; Schnitzbauer Michael; Sauerwald Anselm; Söll Dieter; Steitz Thomas A
Toward understanding phosphoseryl-tRNACys formation: the crystal structure of Methanococcus maripaludis phosphoseryl-tRNA synthetase.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(8):2620-5.
2007: Namgoong Suk; Sheppard Kelly; Sherrer R Lynn; Söll Dieter
Co-evolution of the archaeal tRNA-dependent amidotransferase GatCAB with tRNA(Asn).
FEBS letters 2007;581(2):309-14.
2007: Ambrogelly Alexandre; Palioura Sotiria; Söll Dieter
Natural expansion of the genetic code.
Nature chemical biology 2007;3(1):29-35.
2007: Helgadóttir Sunna; Rosas-Sandoval Guillermina; Söll Dieter; Graham David E
Biosynthesis of phosphoserine in the Methanococcales.
Journal of bacteriology 2007;189(2):575-82.
2007: Söll Dieter
The genetic code revisited--four decades after Francis Crick.
Nucleic acids symposium series (2004) 2007;(51):13-4.
2007: Herring Stephanie; Ambrogelly Alexandre; Polycarpo Carla R; Söll Dieter
Recognition of pyrrolysine tRNA by the Desulfitobacterium hafniense pyrrolysyl-tRNA synthetase.
Nucleic acids research 2007;35(4):1270-8.
2006: Yuan Jing; Palioura Sotiria; Salazar Juan Carlos; Su Dan; O'Donoghue Patrick; Hohn Michael J; Cardoso Alexander Machado; Whitman William B; Söll Dieter
RNA-dependent conversion of phosphoserine forms selenocysteine in eukaryotes and archaea.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(50):18923-7.
2006: Polycarpo Carla R; Herring Stephanie; Bérubé Amélie; Wood John L; Söll Dieter; Ambrogelly Alexandre
Pyrrolysine analogues as substrates for pyrrolysyl-tRNA synthetase.
FEBS letters 2006;580(28-29):6695-700.
2006: Hohn Michael J; Park Hee-Sung; O'Donoghue Patrick; Schnitzbauer Michael; Söll Dieter
Emergence of the universal genetic code imprinted in an RNA record.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(48):18095-100.
2006: Söll Dieter; RajBhandary Uttam L
The genetic code - thawing the 'frozen accident'.
Journal of biosciences 2006;31(4):459-63.
2006: Cardoso Alexander Machado; Polycarpo Carla; Martins Orlando Bonifácio; Söll Dieter
A non-discriminating aspartyl-tRNA synthetase from Halobacterium salinarum.
RNA biology 2006;3(3):110-4.
2006: Oshikane Hiroyuki; Sheppard Kelly; Fukai Shuya; Nakamura Yuko; Ishitani Ryuichiro; Numata Tomoyuki; Sherrer R Lynn; Feng Liang; Schmitt Emmanuelle; Panvert Michel; Blanquet Sylvain; Mechulam Yves; Söll Dieter; Nureki Osamu
Structural basis of RNA-dependent recruitment of glutamine to the genetic code.
Science (New York, N.Y.) 2006;312(5782):1950-4.
2006: Bilokapic Silvija; Maier Timm; Ahel Dragana; Gruic-Sovulj Ita; Söll Dieter; Weygand-Durasevic Ivana; Ban Nenad
Structure of the unusual seryl-tRNA synthetase reveals a distinct zinc-dependent mode of substrate recognition.
The EMBO journal 2006;25(11):2498-509.
2006: Charrière Fabien; Helgadóttir Sunna; Horn Elke K; Söll Dieter; Schneider André
Dual targeting of a single tRNA(Trp) requires two different tryptophanyl-tRNA synthetases in Trypanosoma brucei.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(18):6847-52.
2006: Choi Jeong Jin; Nam Ki Hoon; Min Bokkee; Kim Sang-Jin; Söll Dieter; Kwon Suk-Tae
Protein trans-splicing and characterization of a split family B-type DNA polymerase from the hyperthermophilic archaeal parasite Nanoarchaeum equitans.
Journal of molecular biology 2006;356(5):1093-106.
2006: Sabina Jeffrey; Söll Dieter
The RNA-binding PUA domain of archaeal tRNA-guanine transglycosylase is not required for archaeosine formation.
The Journal of biological chemistry 2006;281(11):6993-7001.
2005: Randau Lennart; Calvin Kate; Hall Michelle; Yuan Jing; Podar Mircea; Li Hong; Söll Dieter
The heteromeric Nanoarchaeum equitans splicing endonuclease cleaves noncanonical bulge-helix-bulge motifs of joined tRNA halves.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(50):17934-9.
2005: Levicán Gloria; Katz Assaf; Valenzuela Patricio; Söll Dieter; Orellana Omar
A tRNA(Glu) that uncouples protein and tetrapyrrole biosynthesis.
FEBS letters 2005;579(28):6383-7.
2005: Ambrogelly Alexandre; Kamtekar Satwik; Stathopoulos Constantinos; Kennedy Dexter; Söll Dieter
Asymmetric behavior of archaeal prolyl-tRNA synthetase.
FEBS letters 2005;579(27):6017-22.
2005: Ahel Dragana; Slade Dea; Mocibob Marko; Söll Dieter; Weygand-Durasevic Ivana
Selective inhibition of divergent seryl-tRNA synthetases by serine analogues.
FEBS letters 2005;579(20):4344-8.
2005: Ruan Benfang; Söll Dieter
The bacterial YbaK protein is a Cys-tRNAPro and Cys-tRNA Cys deacylase.
The Journal of biological chemistry 2005;280(27):25887-91.
2005: Sauerwald Anselm; Sitaramaiah Devarasetty; McCloskey James A; Söll Dieter; Crain Pamela F
N6-Acetyladenosine: a new modified nucleoside from Methanopyrus kandleri tRNA.
FEBS letters 2005;579(13):2807-10.
2005: Randau Lennart; Pearson Michael; Söll Dieter
The complete set of tRNA species in Nanoarchaeum equitans.
FEBS letters 2005;579(13):2945-7.
2005: Ambrogelly Alexandre; Frugier Magali; Ibba Michael; Söll Dieter; Giegé Richard
Transfer RNA recognition by class I lysyl-tRNA synthetase from the Lyme disease pathogen Borrelia burgdorferi.
FEBS letters 2005;579(12):2629-34.
2005: Feng Liang; Yuan Jing; Toogood Helen; Tumbula-Hansen Debra; Söll Dieter
Aspartyl-tRNA synthetase requires a conserved proline in the anticodon-binding loop for tRNA(Asn) recognition in vivo.
The Journal of biological chemistry 2005;280(21):20638-41.
2005: Sauerwald Anselm; Zhu Wenhong; Major Tiffany A; Roy Hervé; Palioura Sotiria; Jahn Dieter; Whitman William B; Yates John R; Ibba Michael; Söll Dieter
RNA-dependent cysteine biosynthesis in archaea.
Science (New York, N.Y.) 2005;307(5717):1969-72.
2005: Rinehart Jesse; Krett Bethany; Rubio Mary Anne T; Alfonzo Juan D; Söll Dieter
Saccharomyces cerevisiae imports the cytosolic pathway for Gln-tRNA synthesis into the mitochondrion.
Genes & development 2005;19(5):583-92.
2005: Feng Liang; Sheppard Kelly; Tumbula-Hansen Debra; Söll Dieter
Gln-tRNAGln formation from Glu-tRNAGln requires cooperation of an asparaginase and a Glu-tRNAGln kinase.
The Journal of biological chemistry 2005;280(9):8150-5.
2005: Randau Lennart; Münch Richard; Hohn Michael J; Jahn Dieter; Söll Dieter
Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5'- and 3'-halves.
Nature 2005;433(7025):537-41.
2005: Ruan Benfang; Bovee Michael L; Sacher Meik; Stathopoulos Constantinos; Poralla Karl; Francklyn Christopher S; Söll Dieter
A unique hydrophobic cluster near the active site contributes to differences in borrelidin inhibition among threonyl-tRNA synthetases.
The Journal of biological chemistry 2005;280(1):571-7.
2004: Korencic Dragana; Polycarpo Carla; Weygand-Durasevic Ivana; Söll Dieter
Differential modes of transfer RNASer recognition in Methanosarcina barkeri.
The Journal of biological chemistry 2004;279(47):48780-6.
2004: Ambrogelly A; Kamtekar S; Sauerwald A; Ruan B; Tumbula-Hansen D; Kennedy D; Ahel I; Söll D
Cys-tRNACys formation and cysteine biosynthesis in methanogenic archaea: two faces of the same problem?
Cellular and molecular life sciences : CMLS 2004;61(19-20):2437-45.
2004: Polycarpo Carla; Ambrogelly Alexandre; Bérubé Amélie; Winbush SusAnn M; McCloskey James A; Crain Pamela F; Wood John L; Söll Dieter
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(34):12450-4.
2004: Randau Lennart; Schauer Stefan; Ambrogelly Alexandre; Salazar Juan Carlos; Moser Jürgen; Sekine Shun-ichi; Yokoyama Shigeyuki; Söll Dieter; Jahn Dieter
tRNA recognition by glutamyl-tRNA reductase.
The Journal of biological chemistry 2004;279(33):34931-7.
2004: Korencic Dragana; Ahel Ivan; Schelert James; Sacher Meik; Ruan Benfang; Stathopoulos Constantinos; Blum Paul; Ibba Michael; Söll Dieter
A freestanding proofreading domain is required for protein synthesis quality control in Archaea.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(28):10260-5.
2004: Baick Ji-Won; Yoon Jang-Ho; Namgoong Suk; Söll Dieter; Kim Sung-Il; Eom Soo-Hyun; Hong Kwang-Won
Growth inhibition of Escherichia coli during heterologous expression of Bacillus subtilis glutamyl-tRNA synthetase that catalyzes the formation of mischarged glutamyl-tRNA1 Gln.
Journal of microbiology (Seoul, Korea) 2004;42(2):111-6.
2004: Feng Liang; Sheppard Kelly; Namgoong Suk; Ambrogelly Alexandre; Polycarpo Carla; Randau Lennart; Tumbula-Hansen Debra; Söll Dieter
Aminoacyl-tRNA synthesis by pre-translational amino acid modification.
RNA biology 2004;1(1):16-20.
2004: Salazar Juan C; Ambrogelly Alexandre; Crain Pamela F; McCloskey James A; Söll Dieter
A truncated aminoacyl-tRNA synthetase modifies RNA.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(20):7536-41.
2004: Ibba Michael; Söll Dieter
Aminoacyl-tRNAs: setting the limits of the genetic code.
Genes & development 2004;18(7):731-8.
2004: Bilokapic Silvija; Korencic Dragana; Söll Dieter; Weygand-Durasevic Ivana
The unusual methanogenic seryl-tRNA synthetase recognizes tRNASer species from all three kingdoms of life.
European journal of biochemistry / FEBS 2004;271(4):694-702.
2004: Núñez Harold; Lefimil Claudia; Min Bokkee; Söll Dieter; Orellana Omar
In vivo formation of glutamyl-tRNA(Gln) in Escherichia coli by heterologous glutamyl-tRNA synthetases.
FEBS letters 2004;557(1-3):133-5.
2004: Ruan Benfang; Nakano Hiroaki; Tanaka Masashi; Mills Jonathan A; DeVito Joseph A; Min Bokkee; Low K Brooks; Battista John R; Söll Dieter
Cysteinyl-tRNA(Cys) formation in Methanocaldococcus jannaschii: the mechanism is still unknown.
Journal of bacteriology 2004;186(1):8-14.
2004: Söll Dieter
Aminoacyl-tRNA tRNA formation: an essential function in protein synthesis and its quality control.
Nucleic acids symposium series (2004) 2004;(48):283-4.
2003: Ahel Ivan; Korencic Dragana; Ibba Michael; Söll Dieter
Trans-editing of mischarged tRNAs.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(26):15422-7.
2003: Salazar Juan C; Ahel Ivan; Orellana Omar; Tumbula-Hansen Debra; Krieger Robert; Daniels Lacy; Söll Dieter
Coevolution of an aminoacyl-tRNA synthetase with its tRNA substrates.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(24):13863-8.
2003: Sabina Jeffrey; Dover Nir; Templeton Lori J; Smulski Dana R; Söll Dieter; LaRossa Robert A
Interfering with different steps of protein synthesis explored by transcriptional profiling of Escherichia coli K-12.
Journal of bacteriology 2003;185(20):6158-70.
2003: Polycarpo Carla; Ambrogelly Alexandre; Ruan Benfang; Tumbula-Hansen Debra; Ataide Sandro F; Ishitani Ryuichiro; Yokoyama Shigeyuki; Nureki Osamu; Ibba Michael; Söll Dieter
Activation of the pyrrolysine suppressor tRNA requires formation of a ternary complex with class I and class II lysyl-tRNA synthetases.
Molecular cell 2003;12(2):287-94.
2003: Min Bokkee; Kitabatake Makoto; Polycarpo Carla; Pelaschier Joanne; Raczniak Gregory; Ruan Benfang; Kobayashi Hiroyuki; Namgoong Suk; Söll Dieter
Protein synthesis in Escherichia coli with mischarged tRNA.
Journal of bacteriology 2003;185(12):3524-6.
2003: Kamtekar Satwik; Kennedy W Dexter; Wang Jimin; Stathopoulos Constantinos; Söll Dieter; Steitz Thomas A
The structural basis of cysteine aminoacylation of tRNAPro by prolyl-tRNA synthetases.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(4):1673-8.
2002: Rosas-Sandoval Guillermina; Ambrogelly Alexandre; Rinehart Jesse; Wei David; Cruz-Vera L Rogelio; Graham David E; Stetter Karl O; Guarneros Gabriel; Söll Dieter
Orthologs of a novel archaeal and of the bacterial peptidyl-tRNA hydrolase are nonessential in yeast.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(26):16707-12.
2002: Schauer Stefan; Chaturvedi Shalini; Randau Lennart; Moser Jürgen; Kitabatake Makoto; Lorenz Stefan; Verkamp Elizabeth; Schubert Wolf-Dieter; Nakayashiki Toru; Murai Masatoshi; Wall Kristen; Thomann Hans-Ulrich; Heinz Dirk W; Inokuchi Hachiro; Söll Dieter; Jahn Dieter
Escherichia coli glutamyl-tRNA reductase. Trapping the thioester intermediate.
The Journal of biological chemistry 2002;277(50):48657-63.
2002: Gruic-Sovulj Ita; Landeka Irena; Söll Dieter; Weygand-Durasevic Ivana
tRNA-dependent amino acid discrimination by yeast seryl-tRNA synthetase.
European journal of biochemistry / FEBS 2002;269(21):5271-9.
2002: Korencic Dragana; Söll Dieter; Ambrogelly Alexandre
A one-step method for in vitro production of tRNA transcripts.
Nucleic acids research 2002;30(20):e105.
2002: Tumbula-Hansen Debra; Feng Liang; Toogood Helen; Stetter Karl O; Söll Dieter
Evolutionary divergence of the archaeal aspartyl-tRNA synthetases into discriminating and nondiscriminating forms.
The Journal of biological chemistry 2002;277(40):37184-90.
2002: Ujwal M L; McCormac Alex C; Goulding Ann; Kumar A Madan; Söll Dieter; Terry Matthew J
Divergent regulation of the HEMA gene family encoding glutamyl-tRNA reductase in Arabidopsis thaliana: expression of HEMA2 is regulated by sugars, but is independent of light and plastid signalling.
Plant molecular biology 2002;50(1):83-91.
2002: Ambrogelly Alexandre; Ahel Ivan; Polycarpo Carla; Bunjun-Srihari Shipra; Krett Bethany; Jacquin-Becker Clarisse; Ruan Benfang; Köhrer Caroline; Stathopoulos Constantinos; RajBhandary Uttam L; Söll Dieter
Methanocaldococcus jannaschii prolyl-tRNA synthetase charges tRNA(Pro) with cysteine.
The Journal of biological chemistry 2002;277(38):34749-54.
2002: Ahel Ivan; Stathopoulos Constantinos; Ambrogelly Alexandre; Sauerwald Anselm; Toogood Helen; Hartsch Thomas; Söll Dieter
Cysteine activation is an inherent in vitro property of prolyl-tRNA synthetases.
The Journal of biological chemistry 2002;277(38):34743-8.
2002: Ibba Michael; Söll Dieter
Genetic code: introducing pyrrolysine.
Current biology : CB 2002;12(13):R464-6.
2002: Kitabatake Makoto; Ali Kamilah; Demain Arnold; Sakamoto Kensaku; Yokoyama Shigeyuki; Söll Dieter
Indolmycin resistance of Streptomyces coelicolor A3(2) by induced expression of one of its two tryptophanyl-tRNA synthetases.
The Journal of biological chemistry 2002;277(26):23882-7.
2002: Feng Liang; Stathopoulos Constantinos; Ahel Ivan; Mitra Anusri; Tumbula-Hansen Debra; Hartsch Thomas; Söll Dieter
Aminoacyl-tRNA formation in the extreme thermophile Thermus thermophilus.
Extremophiles : life under extreme conditions 2002;6(2):167-74.
2002: Terada Takaho; Nureki Osamu; Ishitani Ryuichiro; Ambrogelly Alexandre; Ibba Michael; Söll Dieter; Yokoyama Shigeyuki
Functional convergence of two lysyl-tRNA synthetases with unrelated topologies.
Nature structural biology 2002;9(4):257-62.
2002: Jacquin-Becker Clarisse; Ahel Ivan; Ambrogelly Alexandre; Ruan Benfang; Söll Dieter; Stathopoulos Constantinos
Cysteinyl-tRNA formation and prolyl-tRNA synthetase.
FEBS letters 2002;514(1):34-6.
2002: Min Bokkee; Pelaschier Joanne T; Graham David E; Tumbula-Hansen Debra; Söll Dieter
Transfer RNA-dependent amino acid biosynthesis: an essential route to asparagine formation.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(5):2678-83.
2001: Stathopoulos C; Kim W; Li T; Anderson I; Deutsch B; Palioura S; Whitman W; Söll D
Cysteinyl-tRNA synthetase is not essential for viability of the archaeon Methanococcus maripaludis.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(25):14292-7.
2001: Raczniak G; Becker H D; Min B; Söll D
A single amidotransferase forms asparaginyl-tRNA and glutaminyl-tRNA in Chlamydia trachomatis.
The Journal of biological chemistry 2001;276(49):45862-7.
2001: McCloskey J A; Graham D E; Zhou S; Crain P F; Ibba M; Konisky J; Söll D; Olsen G J
Post-transcriptional modification in archaeal tRNAs: identities and phylogenetic relations of nucleotides from mesophilic and hyperthermophilic Methanococcales.
Nucleic acids research 2001;29(22):4699-706.
2001: Salazar J C; Zúñiga R; Raczniak G; Becker H; Söll D; Orellana O
A dual-specific Glu-tRNA(Gln) and Asp-tRNA(Asn) amidotransferase is involved in decoding glutamine and asparagine codons in Acidithiobacillus ferrooxidans.
FEBS letters 2001;500(3):129-31.
2001: McCormac A C; Fischer A; Kumar A M; Söll D; Terry M J
Regulation of HEMA1 expression by phytochrome and a plastid signal during de-etiolation in Arabidopsis thaliana.
The Plant journal : for cell and molecular biology 2001;25(5):549-61.
2001: Raczniak G; Ibba M; Söll D
Genomics-based identification of targets in pathogenic bacteria for potential therapeutic and diagnostic use.
Toxicology 2001;160(1-3):181-9.
2001: Salazar J C; Zuñiga R; Lefimil C; Söll D; Orellana O
Conserved amino acids near the carboxy terminus of bacterial tyrosyl-tRNA synthetase are involved in tRNA and Tyr-AMP binding.
FEBS letters 2001;491(3):257-60.
2001: Stathopoulos C; Jacquin-Becker C; Becker H D; Li T; Ambrogelly A; Longman R; Söll D
Methanococcus jannaschii prolyl-cysteinyl-tRNA synthetase possesses overlapping amino acid binding sites.
Biochemistry 2001;40(1):46-52.
2001: Stathopoulos C; Ahel I; Ali K; Ambrogelly A; Becker H; Bunjun S; Feng L; Herring S; Jacquin-Becker C; Kobayashi H; Korencic D; Krett B; Mejlhede N; Min B; Nakano H; Namgoong S; Polycarpo C; Raczniak G; Rinehart J; Rosas-Sandoval G; Ruan B; Sabina J; Sauerwald A; Toogood H; Tumbula-Hansen D; Ibba M; Söll D
Aminoacyl-tRNA synthesis: a postgenomic perspective.
Cold Spring Harbor symposia on quantitative biology 2001;66():175-83.
2001: Ruan B; Ahel I; Ambrogelly A; Becker H D; Bunjun S; Feng L; Tumbula-Hansen D; Ibba M; Korencic D; Kobayashi H; Jacquin-Becker C; Mejlhede N; Min B; Raczniak G; Rinehart J; Stathopoulos C; Li T; Söll D
Genomics and the evolution of aminoacyl-tRNA synthesis.
Acta biochimica Polonica 2001;48(2):313-21.
2000: Bunjun S; Stathopoulos C; Graham D; Min B; Kitabatake M; Wang A L; Wang C C; Vivarès C P; Weiss L M; Söll D
A dual-specificity aminoacyl-tRNA synthetase in the deep-rooted eukaryote Giardia lamblia.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(24):12997-3002.
2000: Praetorius-Ibba M; Stange-Thomann N; Kitabatake M; Ali K; Söll I; Carter C W; Ibba M; Söll D
Ancient adaptation of the active site of tryptophanyl-tRNA synthetase for tryptophan binding.
Biochemistry 2000;39(43):13136-43.
2000: Tumbula D L; Becker H D; Chang W Z; Söll D
Domain-specific recruitment of amide amino acids for protein synthesis.
Nature 2000;407(6800):106-10.
2000: Becker H D; Min B; Jacobi C; Raczniak G; Pelaschier J; Roy H; Klein S; Kern D; Söll D
The heterotrimeric Thermus thermophilus Asp-tRNA(Asn) amidotransferase can also generate Gln-tRNA(Gln).
FEBS letters 2000;476(3):140-4.
2000: Ibba M; Becker H D; Stathopoulos C; Tumbula D L; Söll D
The adaptor hypothesis revisited.
Trends in biochemical sciences 2000;25(7):311-6.
2000: Woese C R; Olsen G J; Ibba M; Söll D
Aminoacyl-tRNA synthetases, the genetic code, and the evolutionary process.
Microbiology and molecular biology reviews : MMBR 2000;64(1):202-36.
2000: Stathopoulos C; Li T; Longman R; Vothknecht U C; Becker H D; Ibba M; Söll D
One polypeptide with two aminoacyl-tRNA synthetase activities.
Science (New York, N.Y.) 2000;287(5452):479-82.
2000: Kumar A M; Söll D
Antisense HEMA1 RNA expression inhibits heme and chlorophyll biosynthesis in arabidopsis.
Plant physiology 2000;122(1):49-56.
2000: Kitabatake M; So M W; Tumbula D L; Söll D
Cysteine biosynthesis pathway in the archaeon Methanosarcina barkeri encoded by acquired bacterial genes?
Journal of bacteriology 2000;182(1):143-5.
1999: Jackson K; Söll D
Mutations in a new Arabidopsis cyclophilin disrupt its interaction with protein phosphatase 2A.
Molecular & general genetics : MGG 1999;262(4-5):830-8.
1999: Li T; Graham D E; Stathopoulos C; Haney P J; Kim H S; Vothknecht U; Kitabatake M; Hong K W; Eggertsson G; Curnow A W; Lin W; Celic I; Whitman W; Söll D
Cysteinyl-tRNA formation: the last puzzle of aminoacyl-tRNA synthesis.
FEBS letters 1999;462(3):302-6.
1999: Deruère J; Jackson K; Garbers C; Söll D; Delong A
The RCN1-encoded A subunit of protein phosphatase 2A increases phosphatase activity in vivo.
The Plant journal : for cell and molecular biology 1999;20(4):389-99.
1999: Ibba M; Sever S; Praetorius-Ibba M; Söll D
Transfer RNA identity contributes to transition state stabilization during aminoacyl-tRNA synthesis.
Nucleic acids research 1999;27(18):3631-7.
1999: Tumbula D; Vothknecht U C; Kim H S; Ibba M; Min B; Li T; Pelaschier J; Stathopoulos C; Becker H; Söll D
Archaeal aminoacyl-tRNA synthesis: diversity replaces dogma.
Genetics 1999;152(4):1269-76.
1999: Kumar M A; Chaturvedi S; Söll D
Selective inhibition of HEMA gene expression by photooxidation in Arabidopsis thaliana.
Phytochemistry 1999;51(7):847-51.
1999: Ibba M; Curnow A W; Bono J; Rosa P A; Woese C R; Söll D
Archaeal aminoacyl-tRNA synthesis: unique determinants of a universal genetic code?
The Biological bulletin 1999;196(3):335-6; discussion 336-7.
1999: Ibba M; Losey H C; Kawarabayasi Y; Kikuchi H; Bunjun S; Söll D
Substrate recognition by class I lysyl-tRNA synthetases: a molecular basis for gene displacement.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(2):418-23.
1998: Kim H S; Vothknecht U C; Hedderich R; Celic I; Söll D
Sequence divergence of seryl-tRNA synthetases in archaea.
Journal of bacteriology 1998;180(24):6446-9.
1998: Mullen J L; Turk E; Johnson K; Wolverton C; Ishikawa H; Simmons C; Söll D; Evans M L
Root-growth behavior of the Arabidopsis mutant rgr1. Roles of gravitropism and circumnutation in the waving/coiling phenomenon.
Plant physiology 1998;118(4):1139-45.
1998: Lenhard B; Praetorius-Ibba M; Filipic S; Söll D; Weygand-Durasevic I
C-terminal truncation of yeast SerRS is toxic for Saccharomyces cerevisiae due to altered mechanism of substrate recognition.
FEBS letters 1998;439(3):235-40.
1998: Curnow A W; Tumbula D L; Pelaschier J T; Min B; Söll D
Glutamyl-tRNA(Gln) amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(22):12838-43.
1998: Rokov J; Söll D; Weygand-Durasevic I
Maize mitochondrial seryl-tRNA synthetase recognizes Escherichia coli tRNA(Ser) in vivo and in vitro.
Plant molecular biology 1998;38(3):497-502.
1998: Hong K W; Ibba M; Söll D
Retracing the evolution of amino acid specificity in glutaminyl-tRNA synthetase.
FEBS letters 1998;434(1-2):149-54.
1998: Liu J; Ibba M; Hong K W; Söll D
The terminal adenosine of tRNA(Gln) mediates tRNA-dependent amino acid recognition by glutaminyl-tRNA synthetase.
Biochemistry 1998;37(27):9836-42.
1997: Ibba M; Bono J L; Rosa P A; Söll D
Archaeal-type lysyl-tRNA synthetase in the Lyme disease spirochete Borrelia burgdorferi.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(26):14383-8.
1997: Ibba M; Morgan S; Curnow A W; Pridmore D R; Vothknecht U C; Gardner W; Lin W; Woese C R; Söll D
A euryarchaeal lysyl-tRNA synthetase: resemblance to class I synthetases.
Science (New York, N.Y.) 1997;278(5340):1119-22.
1997: Curnow A W; Hong K w; Yuan R; Kim S i; Martins O; Winkler W; Henkin T M; Söll D
Glu-tRNAGln amidotransferase: a novel heterotrimeric enzyme required for correct decoding of glutamine codons during translation.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(22):11819-26.
1997: Kim S I; Stange-Thomann N; Martins O; Hong K W; Söll D; Fox T D
A nuclear genetic lesion affecting Saccharomyces cerevisiae mitochondrial translation is complemented by a homologous Bacillus gene.
Journal of bacteriology 1997;179(17):5625-7.
1997: Ibba M; Curnow A W; Söll D
Aminoacyl-tRNA synthesis: divergent routes to a common goal.
Trends in biochemical sciences 1997;22(2):39-42.
1997: Lenhard B; Filipic S; Landeka I; Skrtic I; Söll D; Weygand-Durasevic I
Defining the active site of yeast seryl-tRNA synthetase. Mutations in motif 2 loop residues affect tRNA-dependent amino acid recognition.
The Journal of biological chemistry 1997;272(2):1136-41.
1997: Ibba M; Celic I; Curnow A; Kim H; Pelaschier J; Tumbula D; Vothknecht U; Woese C; Söll D
Aminoacyl-tRNA synthesis in Archaea.
Nucleic acids symposium series 1997;(37):305-6.
1997: Curnow A W; Hong K W; Yuan R; Söll D
tRNA-dependent amino acid transformations.
Nucleic acids symposium series 1997;(36):2-4.
1996: Kitabatake M; Ibba M; Hong K W; Söll D; Inokuchi H
Genetic analysis of functional connectivity between substrate recognition domains of Escherichia coli glutaminyl-tRNA synthetase.
Molecular & general genetics : MGG 1996;252(6):717-22.
1996: Curnow A W; Ibba M; Söll D
tRNA-dependent asparagine formation.
Nature 1996;382(6592):589-90.
1996: Kim S I; Nalaskowska M; Germond J E; Pridmore D; Söll D
Asn-tRNA in Lactobacillus bulgaricus is formed by asparaginylation of tRNA and not by transamidation of Asp-tRNA.
Nucleic acids research 1996;24(14):2648-51.
1996: Ibba M; Hong K W; Sherman J M; Sever S; Söll D
Interactions between tRNA identity nucleotides and their recognition sites in glutaminyl-tRNA synthetase determine the cognate amino acid affinity of the enzyme.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(14):6953-8.
1996: Ibba M; Hong K W; Söll D
Glutaminyl-tRNA synthetase: from genetics to molecular recognition.
Genes to cells : devoted to molecular & cellular mechanisms 1996;1(5):421-7.
1996: Garbers C; DeLong A; Deruére J; Bernasconi P; Söll D
A mutation in protein phosphatase 2A regulatory subunit A affects auxin transport in Arabidopsis.
The EMBO journal 1996;15(9):2115-24.
1996: Kim S I; Germond J E; Pridmore D; Söll D
Lactobacillus bulgaricus asparagine synthetase and asparaginyl-tRNA synthetase: coregulation by transcription antitermination?
Journal of bacteriology 1996;178(8):2459-61.
1996: Hong K W; Ibba M; Weygand-Durasevic I; Rogers M J; Thomann H U; Söll D
Transfer RNA-dependent cognate amino acid recognition by an aminoacyl-tRNA synthetase.
The EMBO journal 1996;15(8):1983-91.
1996: Sherman J M; Thomann H U; Söll D
Functional connectivity between tRNA binding domains in glutaminyl-tRNA synthetase.
Journal of molecular biology 1996;256(5):818-28.
1996: Madan Kumar A; Söll D
Glutamate transfer RNA: a cofactor for heme and chlorophyll biosynthesis.
Indian journal of biochemistry & biophysics 1996;33(1):30-4.
1996: Kumar A M; Csankovszki G; Söll D
A second and differentially expressed glutamyl-tRNA reductase gene from Arabidopsis thaliana.
Plant molecular biology 1996;30(3):419-26.
1996: Weygand-Durasevic I; Lenhard B; Filipic S; Söll D
The C-terminal extension of yeast seryl-tRNA synthetase affects stability of the enzyme and its substrate affinity.
The Journal of biological chemistry 1996;271(5):2455-61.
1996: Thomann H U; Ibba M; Hong K W; Söll D
Homologous expression and purification of mutants of an essential protein by reverse epitope-tagging.
Bio/technology (Nature Publishing Company) 1996;14(1):50-5.
1996: Sherman J M; Söll D
Aminoacyl-tRNA synthetases optimize both cognate tRNA recognition and discrimination against noncognate tRNAs.
Biochemistry 1996;35(2):601-7.
1996: Sever S; Rogers K; Rogers M J; Carter C; Söll D
Escherichia coli tryptophanyl-tRNA synthetase mutants selected for tryptophan auxotrophy implicate the dimer interface in optimizing amino acid binding.
Biochemistry 1996;35(1):32-40.
1995: Lloyd A J; Thomann H U; Ibba M; Söll D
A broadly applicable continuous spectrophotometric assay for measuring aminoacyl-tRNA synthetase activity.
Nucleic acids research 1995;23(15):2886-92.
1995: Rogers K C; Söll D
Divergence of glutamate and glutamine aminoacylation pathways: providing the evolutionary rationale for mischarging.
Journal of molecular evolution 1995;40(5):476-81.
1995: Ibba M; Thomann H U; Hong K W; Sherman J M; Weygand-Durasevic I; Sever S; Stange-Thomann N; Praetorius M; Söll D
Substrate selection by aminoacyl-tRNA synthetases.
Nucleic acids symposium series 1995;(33):40-2.
1995: Rogers K C; Crescenzo A T; Söll D
Aminoacylation of transfer RNAs with 2-thiouridine derivatives in the wobble position of the anticodon.
Biochimie 1995;77(1-2):66-74.
1994: Stange-Thomann N; Thomann H U; Lloyd A J; Lyman H; Söll D
A point mutation in Euglena gracilis chloroplast tRNA(Glu) uncouples protein and chlorophyll biosynthesis.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(17):7947-51.
1994: Weygand-Durasevic I; Rogers M J; Söll D
Connecting anticodon recognition with the active site of Escherichia coli glutaminyl-tRNA synthetase.
Journal of molecular biology 1994;240(2):111-8.
1994: Salazar O; Sagredo B; Jedlicki E; Söll D; Weygand-Durasevic I; Orellana O
Thiobacillus ferrooxidans tyrosyl-tRNA synthetase functions in vivo in Escherichia coli.
Journal of bacteriology 1994;176(14):4409-15.
1994: Ilag L L; Kumar A M; Söll D
Light regulation of chlorophyll biosynthesis at the level of 5-aminolevulinate formation in Arabidopsis.
The Plant cell 1994;6(2):265-75.
1994: Weygand-Durasevic I; Nalaskowska M; Söll D
Coexpression of eukaryotic tRNASer and yeast seryl-tRNA synthetase leads to functional amber suppression in Escherichia coli.
Journal of bacteriology 1994;176(1):232-9.
1994: Rogers M J; Adachi T; Inokuchi H; Söll D
Functional communication in the recognition of tRNA by Escherichia coli glutaminyl-tRNA synthetase.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(1):291-5.
1994: Palme K; Hesse T; Garbers C; Simmons C; Söll D
The ERabp gene family: structural and physiological analyses.
Basic life sciences 1994;62():155-61.
1993: Schwob E; Söll D
Selection of a 'minimal' glutaminyl-tRNA synthetase and the evolution of class I synthetases.
The EMBO journal 1993;12(13):5201-8.
1993: Rogers K C; Söll D
Discrimination among tRNAs intermediate in glutamate and glutamine acceptor identity.
Biochemistry 1993;32(51):14210-9.
1993: Zimmerly S; Drainas D; Sylvers L A; Söll D
Identification of a 100-kDa protein associated with nuclear ribonuclease P activity in Schizosaccharomyces pombe.
European journal of biochemistry / FEBS 1993;217(2):501-7.
1993: Hesse T; Garbers C; Brzobohaty B; Kreimer G; Söll D; Melkonian M; Schell J; Palme K
Two members of the ERabp gene family are expressed differentially in reproductive organs but to similar levels in the coleoptile of maize.
Plant molecular biology 1993;23(1):57-66.
1993: Schwob E; Choi S Y; Simmons C; Migliaccio F; Ilag L; Hesse T; Palme K; Söll D
Molecular analysis of three maize 22 kDa auxin-binding protein genes--transient promoter expression and regulatory regions.
The Plant journal : for cell and molecular biology 1993;4(3):423-32.
1993: Weygand-Durasevic I; Ban N; Jahn D; Söll D
Yeast seryl-tRNA synthetase expressed in Escherichia coli recognizes bacterial serine-specific tRNAs in vivo.
European journal of biochemistry / FEBS 1993;214(3):869-77.
1993: Sylvers L A; Rogers K C; Shimizu M; Ohtsuka E; Söll D
A 2-thiouridine derivative in tRNAGlu is a positive determinant for aminoacylation by Escherichia coli glutamyl-tRNA synthetase.
Biochemistry 1993;32(15):3836-41.
1993: Verkamp E; Backman V M; Björnsson J M; Söll D; Eggertsson G
The periplasmic dipeptide permease system transports 5-aminolevulinic acid in Escherichia coli.
Journal of bacteriology 1993;175(5):1452-6.
1993: Kolman C; Söll D
SPL1-1, a Saccharomyces cerevisiae mutation affecting tRNA splicing.
Journal of bacteriology 1993;175(5):1433-42.
1993: Weygand-Durasevic I; Schwob E; Söll D
Acceptor end binding domain interactions ensure correct aminoacylation of transfer RNA.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(5):2010-4.
1993: Rogers M J; Weygand-Durasevic I; Schwob E; Sherman J M; Rogers K C; Adachi T; Inokuchi H; Söll D
Selectivity and specificity in the recognition of tRNA by E coli glutaminyl-tRNA synthetase.
Biochimie 1993;75(12):1083-90.
1993: Rogers M J; Weygand-Durasevic I; Schwob E; Sherman J M; Rogers K C; Thomann H U; Sylvers L A; Ohtsuka E; Inokuchi H; Söll D
The recognition of E. coli glutamine tRNA by glutaminyl-tRNA synthetase.
Nucleic acids symposium series 1993;(29):211-3.
1992: Sherman J M; Rogers K; Rogers M J; Söll D
Synthetase competition and tRNA context determine the in vivo identify of tRNA discriminator mutants.
Journal of molecular biology 1992;228(4):1055-62.
1992: Schön A; Gough S; Söll D
Chloroplast tRNA(Asp): nucleotide sequence and variation of in vivo levels during plastid maturation.
Plant molecular biology 1992;20(4):601-7.
1992: Kumar A M; Söll D
Arabidopsis alternative oxidase sustains Escherichia coli respiration.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(22):10842-6.
1992: Hayase Y; Jahn M; Rogers M J; Sylvers L A; Koizumi M; Inoue H; Ohtsuka E; Söll D
Recognition of bases in Escherichia coli tRNA(Gln) by glutaminyl-tRNA synthetase: a complete identity set.
The EMBO journal 1992;11(11):4159-65.
1992: Jahn D; Verkamp E; Söll D
Glutamyl-transfer RNA: a precursor of heme and chlorophyll biosynthesis.
Trends in biochemical sciences 1992;17(6):215-8.
1992: Sherman J M; Rogers M J; Söll D
Competition of aminoacyl-tRNA synthetases for tRNA ensures the accuracy of aminoacylation.
Nucleic acids research 1992;20(11):2847-52.
1992: Beresten S; Jahn M; Söll D
Aminoacyl-tRNA synthetase-induced cleavage of tRNA.
Nucleic acids research 1992;20(7):1523-30.
1992: Verkamp E; Jahn M; Jahn D; Kumar A M; Söll D
Glutamyl-tRNA reductase from Escherichia coli and Synechocystis 6803. Gene structure and expression.
The Journal of biological chemistry 1992;267(12):8275-80.
1992: Rogers M J; Adachi T; Inokuchi H; Söll D
Switching tRNA(Gln) identity from glutamine to tryptophan.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(8):3463-7.
1991: Englisch-Peters S; Conley J; Plumbridge J; Leptak C; Söll D; Rogers M J
Mutant enzymes and tRNAs as probes of the glutaminyl-tRNA synthetase: tRNA(Gln) interaction.
Biochimie 1991;73(12):1501-8.
1991: Pande S; Jahn D; Söll D
Histidine tRNA guanylyltransferase from Saccharomyces cerevisiae. I. Purification and physical properties.
The Journal of biological chemistry 1991;266(34):22826-31.
1991: Jahn M; Rogers M J; Söll D
Anticodon and acceptor stem nucleotides in tRNA(Gln) are major recognition elements for E. coli glutaminyl-tRNA synthetase.
Nature 1991;352(6332):258-60.
1991: Ilag L L; Jahn D; Eggertsson G; Söll D
The Escherichia coli hemL gene encodes glutamate 1-semialdehyde aminotransferase.
Journal of bacteriology 1991;173(11):3408-13.
1991: Jahn M J; Jahn D; Kumar A M; Söll D
Mono Q chromatography permits recycling of DNA template and purification of RNA transcripts after T7 RNA polymerase reaction.
Nucleic acids research 1991;19(10):2786.
1991: Jahn D; Michelsen U; Söll D
Two glutamyl-tRNA reductase activities in Escherichia coli.
The Journal of biological chemistry 1991;266(4):2542-8.
1991: O'Neill G P; Thorbjarnardóttir S; Michelsen U; Pálsson S; Söll D; Eggertsson G
delta-Aminolevulinic acid dehydratase deficiency can cause delta-aminolevulinate auxotrophy in Escherichia coli.
Journal of bacteriology 1991;173(1):94-100.
1991: Jahn D; Chen M W; Söll D
Purification and functional characterization of glutamate-1-semialdehyde aminotransferase from Chlamydomonas reinhardtii.
The Journal of biological chemistry 1991;266(1):161-7.
1991: O'Neill G P; Jahn D; Söll D
Transfer RNA involvement in chlorophyll biosynthesis.
Sub-cellular biochemistry 1991;17():235-64.
1990: Söll D
The accuracy of aminoacylation--ensuring the fidelity of the genetic code.
Experientia 1990;46(11-12):1089-96.
1990: O'Neill G P; Söll D
Expression of the Synechocystis sp. strain PCC 6803 tRNA(Glu) gene provides tRNA for protein and chlorophyll biosynthesis.
Journal of bacteriology 1990;172(11):6363-71.
1990: O'Neill G P; Söll D
Transfer RNA and the formation of the heme and chlorophyll precursor, 5-aminolevulinic acid.
BioFactors (Oxford, England) 1990;2(4):227-35.
1990: Zimmerly S; Gamulin V; Burkard U; Söll D
The RNA component of RNase P in Schizosaccharomyces species.
FEBS letters 1990;271(1-2):189-93.
1990: O'Neill G P; Schön A; Chow H; Chen M W; Kim Y C; Söll D
Sequence of tRNA(Glu) and its genes from the chloroplast genome of Chlamydomonas reinhardtii.
Nucleic acids research 1990;18(19):5893.
1990: Rokem J S; Schön A; Söll D
Sequence of a tRNAGly from Streptomyces coelicolor.
Nucleic acids research 1990;18(13):3988.
1990: Jahn D; Kim Y C; Ishino Y; Chen M W; Söll D
Purification and functional characterization of the Glu-tRNA(Gln) amidotransferase from Chlamydomonas reinhardtii.
The Journal of biological chemistry 1990;265(14):8059-64.
1990: Chen M W; Jahn D; O'Neill G P; Söll D
Purification of the glutamyl-tRNA reductase from Chlamydomonas reinhardtii involved in delta-aminolevulinic acid formation during chlorophyll biosynthesis.
The Journal of biological chemistry 1990;265(7):4058-63.
1990: Chen M W; Jahn D; Schön A; O'Neill G P; Söll D
Purification and characterization of Chlamydomonas reinhardtii chloroplast glutamyl-tRNA synthetase, a natural misacylating enzyme.
The Journal of biological chemistry 1990;265(7):4054-7.
1990: Rogers M J; Söll D
Inaccuracy and the recognition of tRNA.
Progress in nucleic acid research and molecular biology 1990;39():185-208.
1990: Nichols M; Willis I; Söll D
Yeast suppressor mutations and transfer RNA processing.
Methods in enzymology 1990;181():377-94.
1989: Perona J J; Swanson R N; Rould M A; Steitz T A; Söll D
Structural basis for misaminoacylation by mutant E. coli glutaminyl-tRNA synthetase enzymes.
Science (New York, N.Y.) 1989;246(4934):1152-4.
1989: Rould M A; Perona J J; Söll D; Steitz T A
Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution.
Science (New York, N.Y.) 1989;246(4934):1135-42.
1989: Nichols M; Bell J; Klekamp M S; Weil P A; Söll D
Multiple mutations of the first gene of a dimeric tRNA gene abolish in vitro tRNA gene transcription.
The Journal of biological chemistry 1989;264(29):17084-90.
1989: Schön A; Böck A; Ott G; Sprinzl M; Söll D
The selenocysteine-inserting opal suppressor serine tRNA from E. coli is highly unusual in structure and modification.
Nucleic acids research 1989;17(18):7159-65.
1989: O'Neill G P; Chen M W; Söll D
delta-Aminolevulinic acid biosynthesis in Escherichia coli and Bacillus subtilis involves formation of glutamyl-tRNA.
FEMS microbiology letters 1989;51(3):255-9.
1989: Drainas D; Zimmerly S; Willis I; Söll D
Substrate structural requirements of Schizosaccharomyces pombe RNase P.
FEBS letters 1989;251(1-2):84-8.
1989: Plumbridge J; Söll D
Characterization of cis-acting mutations which increase expression of a glnS-lacZ fusion in Escherichia coli.
Molecular & general genetics : MGG 1989;216(1):113-9.
1988: Swanson R; Hoben P; Sumner-Smith M; Uemura H; Watson L; Söll D
Accuracy of in vivo aminoacylation requires proper balance of tRNA and aminoacyl-tRNA synthetase.
Science (New York, N.Y.) 1988;242(4885):1548-51.
1988: Burkard U; Söll D
The unusually long amino acid acceptor stem of Escherichia coli selenocysteine tRNA results from abnormal cleavage by RNase P.
Nucleic acids research 1988;16(24):11617-24.
1988: Uemura H; Rogers M J; Swanson R; Watson L; Söll D
Site-directed mutagenesis to fine-tune enzyme specificity.
Protein engineering 1988;2(4):293-6.
1988: Kolman C J; Snyder M; Söll D
Genomic organization of tRNA and aminoacyl-tRNA synthetase genes for two amino acids in Saccharomyces cerevisiae.
Genomics 1988;3(3):201-6.
1988: Rogers M J; Söll D
Discrimination between glutaminyl-tRNA synthetase and seryl-tRNA synthetase involves nucleotides in the acceptor helix of tRNA.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(18):6627-31.
1988: O'Neill G P; Peterson D M; Schön A; Chen M W; Söll D
Formation of the chlorophyll precursor delta-aminolevulinic acid in cyanobacteria requires aminoacylation of a tRNAGlu species.
Journal of bacteriology 1988;170(9):3810-6.
1988: Burkard U; Söll D
The 5'-terminal guanylate of chloroplast histidine tRNA is encoded in its gene.
The Journal of biological chemistry 1988;263(20):9578-81.
1988: Perona J J; Swanson R; Steitz T A; Söll D
Overproduction and purification of Escherichia coli tRNA(2Gln) and its use in crystallization of the glutaminyl-tRNA synthetase-tRNA(Gln) complex.
Journal of molecular biology 1988;202(1):121-6.
1988: Nichols M; Söll D; Willis I
Yeast RNase P: catalytic activity and substrate binding are separate functions.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(5):1379-83.
1988: Schön A; Hottinger H; Söll D
Misaminoacylation and transamidation are required for protein biosynthesis in Lactobacillus bulgaricus.
Biochimie 1988;70(3):391-4.
1988: Burkard U; Willis I; Söll D
Processing of histidine transfer RNA precursors. Abnormal cleavage site for RNase P.
The Journal of biological chemistry 1988;263(5):2447-51.
1988: Schön A; Kannangara C G; Gough S; Söll D
Protein biosynthesis in organelles requires misaminoacylation of tRNA.
Nature 1988;331(6152):187-90.
1988: Rogers M J; Ohgi T; Plumbridge J; Söll D
Nucleotide sequences of the Escherichia coli nagE and nagB genes: the structural genes for the N-acetylglucosamine transport protein of the bacterial phosphoenolpyruvate: sugar phosphotransferase system and for glucosamine-6-phosphate deaminase.
Gene 1988;62(2):197-207.
1988: Uemura H; Conley J; Yamao F; Rogers J; Söll D
Escherichia coli glutaminyl-tRNA synthetase: a single amino acid replacement relaxes rRNA specificity.
Protein sequences & data analysis 1988;1(6):479-85.
1987: Plumbridge J; Söll D
The effect of dam methylation on the expression of glnS in E. coli.
Biochimie 1987;69(5):539-41.
1987: Cherayil B; Krupp G; Schuchert P; Char S; Söll D
The RNA components of Schizosaccharomyces pombe RNase P are essential for cell viability.
Gene 1987;60(2-3):157-61.
1986: Willis I; Nichols M; Chisholm V; Söll D; Heyer W D; Szankasi P; Amstutz H; Munz P; Kohli J
Functional complementation between mutations in a yeast suppressor tRNA gene reveals potential for evolution of tRNA sequences.
Proceedings of the National Academy of Sciences of the United States of America 1986;83(20):7860-4.
1986: Schön A; Krupp G; Gough S; Berry-Lowe S; Kannangara C G; Söll D
The RNA required in the first step of chlorophyll biosynthesis is a chloroplast glutamate tRNA.
Nature 1986;322(6076):281-4.
1986: Willis I; Frendewey D; Nichols M; Hottinger-Werlen A; Schaack J; Söll D
A single base change in the intron of a serine tRNA affects the rate of RNase P cleavage in vitro and suppressor activity in vivo in Saccharomyces cerevisiae.
The Journal of biological chemistry 1986;261(13):5878-85.
1985: Hottinger-Werlen A; Schaack J; Lapointe J; Mao J; Nichols M; Söll D
Dimeric tRNA gene arrangement in Schizosaccharomyces pombe allows increased expression of the downstream gene.
Nucleic acids research 1985;13(24):8739-47.
1985: Uemura H; Thorbjarnardóttir S; Gamulin V; Yano J; Andrésson O S; Söll D; Eggertsson G
supN ochre suppressor gene in Escherichia coli codes for tRNALys.
Journal of bacteriology 1985;163(3):1288-9.
1985: Pearson D; Willis I; Hottinger H; Bell J; Kumar A; Leupold U; Söll D
Mutations preventing expression of sup3 tRNASer nonsense suppressors of Schizosaccharomyces pombe.
Molecular and cellular biology 1985;5(4):808-15.
1985: Thorbjarnardóttir S; Uemura H; Dingermann T; Rafnar T; Thorsteinsdóttir S; Söll D; Eggertsson G
Escherichia coli supH suppressor: temperature-sensitive missense suppression caused by an anticodon change in tRNASer2.
Journal of bacteriology 1985;161(1):207-11.
1985: Thorbjarnardóttir S; Dingermann T; Rafnar T; Andrésson O S; Söll D; Eggertsson G
Leucine tRNA family of Escherichia coli: nucleotide sequence of the supP(Am) suppressor gene.
Journal of bacteriology 1985;161(1):219-22.
1984: Hoben P; Uemura H; Yamao F; Cheung A; Swanson R; Sumner-Smith M; Söll D
Misaminoacylation by glutaminyl-tRNA synthetase: relaxed specificity in wild-type and mutant enzymes.
Federation proceedings 1984;43(15):2972-6.
1984: Inokuchi H; Hoben P; Yamao F; Ozeki H; Söll D
Transfer RNA mischarging mediated by a mutant Escherichia coli glutaminyl-tRNA synthetase.
Proceedings of the National Academy of Sciences of the United States of America 1984;81(16):5076-80.
1984: Willis I; Hottinger H; Pearson D; Chisholm V; Leupold U; Söll D
Mutations affecting excision of the intron from a eukaryotic dimeric tRNA precursor.
The EMBO journal 1984;3(7):1573-80.
1984: Sumner-Smith M; Hottinger H; Willis I; Koch T L; Arentzen R; Söll D
The sup8 tRNALeu gene of Schizosaccharomyces pombe has an unusual intervening sequence and reduced pairing in the anticodon stem.
Molecular & general genetics : MGG 1984;197(3):447-52.
1983: Gamulin V; Mao J; Appel B; Sumner-Smith M; Yamao F; Söll D
Six Schizosaccharomyces pombe tRNA genes including a gene for a tRNALys with an intervening sequence which cannot base-pair with the anticodon.
Nucleic acids research 1983;11(24):8537-46.
1983: Cheung A; Hoben P; Inokuchi H; Ozeki H; Sumner-Smith M; Swanson R; Uemura H; Yamao F; Söll D
The structure and regulation of Escherichia coli glutaminyl-tRNA synthetase.
Nucleic acids symposium series 1983;(12):221-2.
1982: Hoben P; Royal N; Cheung A; Yamao F; Biemann K; Söll D
Escherichia coli glutaminyl-tRNA synthetase. II. Characterization of the glnS gene product.
The Journal of biological chemistry 1982;257(19):11644-50.
1982: Hottinger H; Pearson D; Yamao F; Gamulin V; Cooley L; Cooper T; Söll D
Nonsense suppression in Schizosaccharomyces pombe: the S. pombe Sup3-e tRNASerUGA gene is active in S. cerevisiae.
Molecular & general genetics : MGG 1982;188(2):219-24.

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