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Forrest Spencer

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Saccharomyces cerevisiae

Physiology

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Rebecca Deering Brose; Gao-xiang Dong; JEFFREY KEEFER; Martina C McGuinness; Shirley Purvis; Tonya Schneidereith; Gloria Shin; Forrest Spencer; Kirby D Smith
Activation of the stress proteome as a mechanism for small molecule therapeutics.
Peter C Stirling; Cheryl M Tucker; Forrest Spencer; Munira A Basrai; Matthew J Crisp; Maitreya J Dunham; Philip Hieter
Mutability and mutational spectrum of chromosome transmission fidelity genes.
Eitan Halper-Stromberg; Laurence Frelin; Ingo Ruczinski; Robert B Scharpf; Chunfa Jie; Benilton Carvalho; Haiping Hao; Kurt Hetrick; Anne E Jedlicka; Amanda Dziedzic; Kim Doheny; Alan F Scott; Stephen B Baylin; Jonathan Pevsner; Forrest Spencer; Rafael A Irizarry
Performance assessment of copy number microarray platforms using a spike-in experiment.

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All Publications

2012: Rebecca Deering Brose; Gao-xiang Dong; JEFFREY KEEFER; Martina C McGuinness; Shirley Purvis; Tonya Schneidereith; Gloria Shin; Forrest Spencer; Kirby D Smith
Activation of the stress proteome as a mechanism for small molecule therapeutics.
Human molecular genetics 2012;21(19):4237-52.
2012: Peter C Stirling; Cheryl M Tucker; Forrest Spencer; Munira A Basrai; Matthew J Crisp; Maitreya J Dunham; Philip Hieter
Mutability and mutational spectrum of chromosome transmission fidelity genes.
Chromosoma 2012;121(3):263-75.
2011: Eitan Halper-Stromberg; Laurence Frelin; Ingo Ruczinski; Robert B Scharpf; Chunfa Jie; Benilton Carvalho; Haiping Hao; Kurt Hetrick; Anne E Jedlicka; Amanda Dziedzic; Kim Doheny; Alan F Scott; Stephen B Baylin; Jonathan Pevsner; Forrest Spencer; Rafael A Irizarry
Performance assessment of copy number microarray platforms using a spike-in experiment.
Bioinformatics (Oxford, England) 2011;27(8):1052-60.
2008: Thomas D Barber; Kirk McManus; Karen W Y Yuen; Marcelo Reis; Giovanni Parmigiani; Dong Shen; Irene Barrett; Yasaman Nouhi; Forrest Spencer; Sanford Markowitz; Victor E Velculescu; Kenneth W Kinzler; Bert Vogelstein; Christoph Lengauer; Philip Hieter
Chromatid cohesion defects may underlie chromosome instability in human colorectal cancers.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(9):3443-8.
2008: Brian D Peyser; Rafael A Irizarry; Forrest Spencer
Statistical analysis of fitness data determined by TAG hybridization on microarrays.
Methods in molecular biology (Clifton, N.J.) 2008;416():369-81.
2008: Pamela B Meluh; Xuewen Pan; Daniel S Yuan; CAROL TIFFANY; Ou Chen; Sharon Sookhai-Mahadeo; Xiaoling Wang; Brian D Peyser; Rafael A Irizarry; Forrest Spencer; Jef Boeke
Analysis of genetic interactions on a genome-wide scale in budding yeast: diploid-based synthetic lethality analysis by microarray.
Methods in molecular biology (Clifton, N.J.) 2008;416():221-47.
2007: Karen W Y Yuen; Cheryl D Warren; Ou Chen; Teresa Kwok; Philip Hieter; Forrest Spencer
Systematic genome instability screens in yeast and their potential relevance to cancer.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(10):3925-30.
2007: Sean R Collins; Patrick Kemmeren; Xue-Chu Zhao; Jack F Greenblatt; Forrest Spencer; Frank C P Holstege; Jonathan S Weissman; Nevan J Krogan
Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae.
Molecular & cellular proteomics : MCP 2007;6(3):439-50.
2006: Siew Loon Ooi; Xuewen Pan; Brian D Peyser; Ping Ye; Pamela B Meluh; Daniel S Yuan; Rafael A Irizarry; Joel S Bader; Forrest Spencer; Jef Boeke
Global synthetic-lethality analysis and yeast functional profiling.
Trends in genetics : TIG 2006;22(1):56-63.
2006: Cory D Dunn; Marina S Lee; Forrest Spencer; Robert E Jensen
A genomewide screen for petite-negative yeast strains yields a new subunit of the i-AAA protease complex.
Molecular biology of the cell 2006;17(1):213-26.
2005: James P Kastenmayer; Marina S Lee; Andrew L Hong; Forrest Spencer; Munira A Basrai
The C-terminal half of Saccharomyces cerevisiae Mad1p mediates spindle checkpoint function, chromosome transmission fidelity and CEN association.
Genetics 2005;170(2):509-17.
2005: Rafael A Irizarry; Daniel S Warren; Forrest Spencer; Irene F Kim; Shyam Biswal; Bryan C Frank; Edward Gabrielson; Joe G. N. Garcia; Joel Geoghegan; Gregory G Germino; Constance A Griffin; Sara C Hilmer; Eric Hoffman; Anne E Jedlicka; Ernest Kawasaki; Francisco Martínez-Murillo; Laura Morsberger; Hannah Lee; David Petersen; John Quackenbush; Alan L Scott; Michael Wilson; Yanqin Yang; Shui Q Ye; Wayne Yu
Multiple-laboratory comparison of microarray platforms.
Nature methods 2005;2(5):345-50.
2005: Ping Ye; Brian D Peyser; Xuewen Pan; Jef Boeke; Forrest Spencer; Joel S Bader
Gene function prediction from congruent synthetic lethal interactions in yeast.
Molecular systems biology 2005;1():2005.0026.
2005: Ping Ye; Brian D Peyser; Forrest Spencer; Joel S Bader
Commensurate distances and similar motifs in genetic congruence and protein interaction networks in yeast.
BMC bioinformatics 2005;6():270.
2005: Brian D Peyser; Rafael A Irizarry; CAROL TIFFANY; Ou Chen; Daniel S Yuan; Jef Boeke; Forrest Spencer
Improved statistical analysis of budding yeast TAG microarrays revealed by defined spike-in pools.
Nucleic acids research 2005;33(16):e140.
2005: Daniel S Yuan; Xuewen Pan; Siew Loon Ooi; Brian D Peyser; Forrest Spencer; Rafael A Irizarry; Jef Boeke
Improved microarray methods for profiling the Yeast Knockout strain collection.
Nucleic acids research 2005;33(12):e103.
2004: Xuewen Pan; Daniel S Yuan; Dong Xiang; Xiaoling Wang; Sharon Sookhai-Mahadeo; Joel S Bader; Philip Hieter; Forrest Spencer; Jef Boeke
A robust toolkit for functional profiling of the yeast genome.
Molecular cell 2004;16(3):487-96.
2004: Marina S Lee; Forrest Spencer
Bipolar orientation of chromosomes in Saccharomyces cerevisiae is monitored by Mad1 and Mad2, but not by Mad3.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(29):10655-60.
2004: Cheryl D Warren; D Mark Eckley; Marina S Lee; Joseph S Hanna; Adam Hughes; Brian D Peyser; Chunfa Jie; Rafael A Irizarry; Forrest Spencer
S-phase checkpoint genes safeguard high-fidelity sister chromatid cohesion.
Molecular biology of the cell 2004;15(4):1724-35.
2002: Cheryl D Warren; D Michelle Brady; Raymond C Johnston; Joseph S Hanna; Kevin G Hardwick; Forrest Spencer
Distinct chromosome segregation roles for spindle checkpoint proteins.
Molecular biology of the cell 2002;13(9):3029-41.
2001: Forrest Spencer; G Simchen
Transfer of YAC clones to new hosts by karyogamy-deficient mating.
Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.] 2001;Chapter 5():Unit 5.14.
2001: Joseph S Hanna; E S Kroll; V Lundblad; Forrest Spencer
Saccharomyces cerevisiae CTF18 and CTF4 are required for sister chromatid cohesion.
Molecular and cellular biology 2001;21(9):3144-58.
2000: R Krishnan; F Pangilinan; C Lee; Forrest Spencer
Saccharomyces cerevisiae BUB2 prevents mitotic exit in response to both spindle and kinetochore damage.
Genetics 2000;156(2):489-500.
2000: R Ploger; J Zhang; D Bassett; Roger H Reeves; Philip Hieter; Mark S Boguski; Forrest Spencer
XREFdb: cross-referencing the genetics and genes of mammals and model organisms.
Nucleic acids research 2000;28(1):120-2.
1999: Nancy J Biery; Zayd Eldadah; CS Moore; Gail Stetten; Forrest Spencer; Harry C Dietz
Revised genomic organization of FBN1 and significance for regulated gene expression.
Genomics 1999;56(1):70-7.
1999: DY Jin; Christine A Kozak; F Pangilinan; Forrest Spencer; Eric Green; Kuan-Teh Jeang
Mitotic checkpoint locus MAD1L1 maps to human chromosome 7p22 and mouse chromosome 5.
Genomics 1999;55(3):363-4.
1998: R Krishnan; B Goodman; DY Jin; Kuan-Teh Jeang; C Collins; Gail Stetten; Forrest Spencer
Map location and gene structure of the Homo sapiens mitotic arrest deficient 2 (MAD2L1) gene at 4q27.
Genomics 1998;49(3):475-8.
1998: DY Jin; Forrest Spencer; Kuan-Teh Jeang
Human T cell leukemia virus type 1 oncoprotein Tax targets the human mitotic checkpoint protein MAD1.
Cell 1998;93(1):81-91.
1997: F Pangilinan; Q Li; T Weaver; BC Lewis; Chi Dang; Forrest Spencer
Mammalian BUB1 protein kinases: map positions and in vivo expression.
Genomics 1997;46(3):379-88.
1997: D E Bassett; Mark S Boguski; Forrest Spencer; Roger H Reeves; S Kim; T Weaver; Philip Hieter
Genome cross-referencing and XREFdb: implications for the identification and analysis of genes mutated in human disease.
Nature genetics 1997;15(4):339-44.
1997: Forrest Spencer
Surveillance and genome stability in budding yeast: implications for mammalian carcinogenesis.
Current topics in microbiology and immunology 1997;221():19-35.
1996: H A Perlick; S M Medghalchi; Forrest Spencer; R J Kendzior; Harry C Dietz
Mammalian orthologues of a yeast regulator of nonsense transcript stability.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(20):10928-32.
1996: F Pangilinan; Forrest Spencer
Abnormal kinetochore structure activates the spindle assembly checkpoint in budding yeast.
Molecular biology of the cell 1996;7(8):1195-208.
1996: Munira A Basrai; J Kingsbury; Douglas Koshland; Forrest Spencer; Philip Hieter
Faithful chromosome transmission requires Spt4p, a putative regulator of chromatin structure in Saccharomyces cerevisiae.
Molecular and cellular biology 1996;16(6):2838-47.
1996: Forrest Spencer; Giora Simchen
Transfer of YAC clones to new yeast hosts.
Methods in molecular biology (Clifton, N.J.) 1996;54():239-52.
1995: D E Bassett; Mark S Boguski; Forrest Spencer; Roger H Reeves; M Goebl; Philip Hieter
Comparative genomics, genome cross-referencing and XREFdb.
Trends in genetics : TIG 1995;11(9):372-3.
1994: Forrest Spencer; Y Hugerat; Giora Simchen; O Hurko; C Connelly; Philip Hieter
Yeast kar1 mutants provide an effective method for YAC transfer to new hosts.
Genomics 1994;22(1):118-26.
1994: Y Hugerat; Forrest Spencer; Drora Zenvirth; Giora Simchen
A versatile method for efficient YAC transfer between any two strains.
Genomics 1994;22(1):108-17.
1994: Gary Ketner; Forrest Spencer; Tugendreich Stuart; C Connelly; Philip Hieter
Efficient manipulation of the human adenovirus genome as an infectious yeast artificial chromosome clone.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(13):6186-90.
1993: Kimberly F Doheny; Peter K Sorger; Anthony A Hyman; Tugendreich Stuart; Forrest Spencer; Philip Hieter
Identification of essential components of the S. cerevisiae kinetochore.
Cell 1993;73(4):761-74.
1993: Natalay Kouprina; A Tsouladze; M Koryabin; Philip Hieter; Forrest Spencer; Vladimir Larionov
Identification and genetic mapping of CHL genes controlling mitotic chromosome transmission in yeast.
Yeast (Chichester, England) 1993;9(1):11-9.
1992: Natalay Kouprina; E Kroll; V Bannikov; V Bliskovsky; Rinat Z Gizatullin; A Kirillov; B Shestopalov; V Zakharyev; Philip Hieter; Forrest Spencer
CTF4 (CHL15) mutants exhibit defective DNA metabolism in the yeast Saccharomyces cerevisiae.
Molecular and cellular biology 1992;12(12):5736-47.
1992: Forrest Spencer; Philip Hieter
Centromere DNA mutations induce a mitotic delay in Saccharomyces cerevisiae.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(19):8908-12.
1991: J H Shero; Michael Koval; Forrest Spencer; R E Palmer; Philip Hieter; Douglas Koshland
Analysis of chromosome segregation in Saccharomyces cerevisiae.
Methods in enzymology 1991;194():749-73.
1990: S L Gerring; Forrest Spencer; Philip Hieter
The CHL 1 (CTF 1) gene product of Saccharomyces cerevisiae is important for chromosome transmission and normal cell cycle progression in G2/M.
The EMBO journal 1990;9(13):4347-58.
1990: Forrest Spencer; S L Gerring; C Connelly; Philip Hieter
Mitotic chromosome transmission fidelity mutants in Saccharomyces cerevisiae.
Genetics 1990;124(2):237-49.
1989: Forrest Spencer; C Connelly; S Gerring; J Shero; R Sikorski; Philip Hieter
Chromosomal aneuploidy in Saccharomyces cerevisiae.
Progress in clinical and biological research 1989;318():293-306.
1982: Forrest Spencer; F Michael Hoffmann; William M Gelbart
Decapentaplegic: a gene complex affecting morphogenesis in Drosophila melanogaster.
Cell 1982;28(3):451-61.