Didier Stainier

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Herbert Shane P; Huisken Jan; Kim Tyson N; Feldman Morri E; Houseman Benjamin T; Wang Rong A; Shokat Kevan M; Stainier Didier Y R
Arterial-venous segregation by selective cell sprouting: an alternative mode of blood vessel formation.
Lee Christina Y; Vogeli Kevin M; Kim Se-Hee; Chong Shang-Wei; Jiang Yun-Jin; Stainier Didier Y R; Jin Suk-Won
Notch signaling functions as a cell-fate switch between the endothelial and hematopoietic lineages.
Anderson Ryan M; Bosch Justin A; Goll Mary G; Hesselson Daniel; Dong P Duc Si; Shin Donghun; Chi Neil C; Shin Chong Hyun; Schlegel Amnon; Halpern Marnie; Stainier Didier Y R
Loss of Dnmt1 catalytic activity reveals multiple roles for DNA methylation during pancreas development and regeneration.

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All Publications

2009: Herbert Shane P; Huisken Jan; Kim Tyson N; Feldman Morri E; Houseman Benjamin T; Wang Rong A; Shokat Kevan M; Stainier Didier Y R
Arterial-venous segregation by selective cell sprouting: an alternative mode of blood vessel formation.
Science (New York, N.Y.) 2009;326(5950):294-8.
2009: Lee Christina Y; Vogeli Kevin M; Kim Se-Hee; Chong Shang-Wei; Jiang Yun-Jin; Stainier Didier Y R; Jin Suk-Won
Notch signaling functions as a cell-fate switch between the endothelial and hematopoietic lineages.
Current biology : CB 2009;19(19):1616-22.
2009: Anderson Ryan M; Bosch Justin A; Goll Mary G; Hesselson Daniel; Dong P Duc Si; Shin Donghun; Chi Neil C; Shin Chong Hyun; Schlegel Amnon; Halpern Marnie; Stainier Didier Y R
Loss of Dnmt1 catalytic activity reveals multiple roles for DNA methylation during pancreas development and regeneration.
Developmental biology 2009;334(1):213-23.
2009: Hesselson Daniel; Anderson Ryan M; Beinat Marine; Stainier Didier Y R
Distinct populations of quiescent and proliferative pancreatic beta-cells identified by HOTcre mediated labeling.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(35):14896-901.
2009: Goll Mary G; Anderson Ryan; Stainier Didier Y R; Spradling Allan C; Halpern Marnie E
Transcriptional silencing and reactivation in transgenic zebrafish.
Genetics 2009;182(3):747-55.
2009: Huisken Jan; Stainier Didier Y R
Selective plane illumination microscopy techniques in developmental biology.
Development (Cambridge, England) 2009;136(12):1963-75.
2009: Aanstad Pia; Santos Nicole; Corbit Kevin C; Scherz Paul J; Trinh Le A; Salvenmoser Willi; Huisken Jan; Reiter Jeremy F; Stainier Didier Y R
The extracellular domain of Smoothened regulates ciliary localization and is required for high-level Hh signaling.
Current biology : CB 2009;19(12):1034-9.
2009: Herzog Wiebke; Müller Katja; Huisken Jan; Stainier Didier Y R
Genetic evidence for a noncanonical function of seryl-tRNA synthetase in vascular development.
Circulation research 2009;104(11):1260-6.
2009: de Jong-Curtain Tanya A; Parslow Adam C; Trotter Andrew J; Hall Nathan E; Verkade Heather; Tabone Tania; Christie Elizabeth L; Crowhurst Meredith O; Layton Judith E; Shepherd Iain T; Nixon Susan J; Parton Robert G; Zon Leonard I; Stainier Didier Y R; Lieschke Graham J; Heath Joan K
Abnormal nuclear pore formation triggers apoptosis in the intestinal epithelium of elys-deficient zebrafish.
Gastroenterology 2009;136(3):902-11.
2008: Munson Chantilly; Huisken Jan; Bit-Avragim Nana; Kuo Taiyi; Dong P D; Ober Elke A; Verkade Heather; Abdelilah-Seyfried Salim; Stainier Didier Y R
Regulation of neurocoel morphogenesis by Pard6 gamma b.
Developmental biology 2008;324(1):41-54.
2008: Morton Sarah U; Scherz Paul J; Cordes Kimberly R; Ivey Kathryn N; Stainier Didier Y R; Srivastava Deepak
microRNA-138 modulates cardiac patterning during embryonic development.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(46):17830-5.
2008: Chung Won-Suk; Shin Chong Hyun; Stainier Didier Y R
Bmp2 signaling regulates the hepatic versus pancreatic fate decision.
Developmental cell 2008;15(5):738-48.
2008: Sakaguchi Takuya F; Sadler Kirsten C; Crosnier Cecile; Stainier Didier Y R
Endothelial signals modulate hepatocyte apicobasal polarization in zebrafish.
Current biology : CB 2008;18(20):1565-71.
2008: Fish Jason E; Santoro Massimo M; Morton Sarah U; Yu Sangho; Yeh Ru-Fang; Wythe Joshua D; Ivey Kathryn N; Bruneau Benoit G; Stainier Didier Y R; Srivastava Deepak
miR-126 regulates angiogenic signaling and vascular integrity.
Developmental cell 2008;15(2):272-84.
2008: Dong P Duc Si; Provost Elayne; Leach Steven D; Stainier Didier Y R
Graded levels of Ptf1a differentially regulate endocrine and exocrine fates in the developing pancreas.
Genes & development 2008;22(11):1445-50.
2008: Chi Neil C; Shaw Robin M; Jungblut Benno; Huisken Jan; Ferrer Tania; Arnaout Rima; Scott Ian; Beis Dimitris; Xiao Tong; Baier Herwig; Jan Lily Y; Tristani-Firouzi Martin; Stainier Didier Y R
Genetic and physiologic dissection of the vertebrate cardiac conduction system.
PLoS biology 2008;6(5):e109.
2008: Shin Chong Hyun; Chung Won-Suk; Hong Sung-Kook; Ober Elke A; Verkade Heather; Field Holly A; Huisken Jan; Stainier Didier Y R
Multiple roles for Med12 in vertebrate endoderm development.
Developmental biology 2008;317(2):467-79.
2008: Chung Won-Suk; Stainier Didier Y R
Intra-endodermal interactions are required for pancreatic beta cell induction.
Developmental cell 2008;14(4):582-93.
2008: Chi Neil C; Shaw Robin M; De Val Sarah; Kang Guson; Jan Lily Y; Black Brian L; Stainier Didier Y R
Foxn4 directly regulates tbx2b expression and atrioventricular canal formation.
Genes & development 2008;22(6):734-9.
2008: Scherz Paul J; Huisken Jan; Sahai-Hernandez Pankaj; Stainier Didier Y R
High-speed imaging of developing heart valves reveals interplay of morphogenesis and function.
Development (Cambridge, England) 2008;135(6):1179-87.
2008: Curado Silvia; Stainier Didier Y R; Anderson Ryan M
Nitroreductase-mediated cell/tissue ablation in zebrafish: a spatially and temporally controlled ablation method with applications in developmental and regeneration studies.
Nature protocols 2008;3(6):948-54.
2007: Schlegel Amnon; Stainier Didier Y R
Lessons from "lower" organisms: what worms, flies, and zebrafish can teach us about human energy metabolism.
PLoS genetics 2007;3(11):e199.
2007: Santoro Massimo M; Samuel Temesgen; Mitchell Tracy; Reed John C; Stainier Didier Y R
Birc2 (cIap1) regulates endothelial cell integrity and blood vessel homeostasis.
Nature genetics 2007;39(11):1397-402.
2007: Huisken Jan; Stainier Didier Y R
Even fluorescence excitation by multidirectional selective plane illumination microscopy (mSPIM).
Optics letters 2007;32(17):2608-10.
2007: Bagnat Michel; Cheung Isla D; Mostov Keith E; Stainier Didier Y R
Genetic control of single lumen formation in the zebrafish gut.
Nature cell biology 2007;9(8):954-60.
2007: Arnaout Rima; Ferrer Tania; Huisken Jan; Spitzer Kenneth; Stainier Didier Y R; Tristani-Firouzi Martin; Chi Neil C
Zebrafish model for human long QT syndrome.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(27):11316-21.
2007: Jin Suk-Won; Herzog Wiebke; Santoro Massimo M; Mitchell Tracy S; Frantsve Julie; Jungblut Benno; Beis Dimitris; Scott Ian C; D'Amico Leonard A; Ober Elke A; Verkade Heather; Field Holly A; Chi Neil C; Wehman Ann M; Baier Herwig; Stainier Didier Y R
A transgene-assisted genetic screen identifies essential regulators of vascular development in vertebrate embryos.
Developmental biology 2007;307(1):29-42.
2007: Shin Donghun; Shin Chong Hyun; Tucker Jennifer; Ober Elke A; Rentzsch Fabian; Poss Kenneth D; Hammerschmidt Matthias; Mullins Mary C; Stainier Didier Y R
Bmp and Fgf signaling are essential for liver specification in zebrafish.
Development (Cambridge, England) 2007;134(11):2041-50.
2007: Curado Silvia; Anderson Ryan M; Jungblut Benno; Mumm Jeff; Schroeter Eric; Stainier Didier Y R
Conditional targeted cell ablation in zebrafish: a new tool for regeneration studies.
Developmental dynamics : an official publication of the American Association of Anatomists 2007;236(4):1025-35.
2007: Scott Ian C; Masri Bernard; D'Amico Leonard A; Jin Suk-Won; Jungblut Benno; Wehman Ann M; Baier Herwig; Audigier Yves; Stainier Didier Y R
The g protein-coupled receptor agtrl1b regulates early development of myocardial progenitors.
Developmental cell 2007;12(3):403-13.
2007: Dong P Duc Si; Munson Chantilly A; Norton William; Crosnier Cecile; Pan Xiufang; Gong Zhiyuan; Neumann Carl J; Stainier Didier Y R
Fgf10 regulates hepatopancreatic ductal system patterning and differentiation.
Nature genetics 2007;39(3):397-402.
2007: D'Amico Leonard; Scott Ian C; Jungblut Benno; Stainier Didier Y R
A mutation in zebrafish hmgcr1b reveals a role for isoprenoids in vertebrate heart-tube formation.
Current biology : CB 2007;17(3):252-9.
2006: Schlegel Amnon; Stainier Didier Y R
Microsomal triglyceride transfer protein is required for yolk lipid utilization and absorption of dietary lipids in zebrafish larvae.
Biochemistry 2006;45(51):15179-87.
2006: Curado Silvia; Stainier Didier Y R
The HeArt of regeneration.
Cell 2006;127(3):462-4.
2006: Sakaguchi Takuya; Kikuchi Yutaka; Kuroiwa Atsushi; Takeda Hiroyuki; Stainier Didier Y R
The yolk syncytial layer regulates myocardial migration by influencing extracellular matrix assembly in zebrafish.
Development (Cambridge, England) 2006;133(20):4063-72.
2006: Vogeli Kevin M; Jin Suk-Won; Martin Gail R; Stainier Didier Y R
A common progenitor for haematopoietic and endothelial lineages in the zebrafish gastrula.
Nature 2006;443(7109):337-9.
2006: Ober Elke A; Verkade Heather; Field Holly A; Stainier Didier Y R
Mesodermal Wnt2b signalling positively regulates liver specification.
Nature 2006;442(7103):688-91.
2006: Stainier Didier
No stem cell is an islet (yet).
The New England journal of medicine 2006;354(5):521-3.
2006: Beis Dimitris; Stainier Didier Y R
In vivo cell biology: following the zebrafish trend.
Trends in cell biology 2006;16(2):105-12.
2005: Jin Suk-Won; Beis Dimitris; Mitchell Tracy; Chen Jau-Nian; Stainier Didier Y R
Cellular and molecular analyses of vascular tube and lumen formation in zebrafish.
Development (Cambridge, England) 2005;132(23):5199-209.
2005: Corbit Kevin C; Aanstad Pia; Singla Veena; Norman Andrew R; Stainier Didier Y R; Reiter Jeremy F
Vertebrate Smoothened functions at the primary cilium.
Nature 2005;437(7061):1018-21.
2005: Ng Annie N Y; de Jong-Curtain Tanya A; Mawdsley David J; White Sara J; Shin Jimann; Appel Bruce; Dong P Duc Si; Stainier Didier Y R; Heath Joan K
Formation of the digestive system in zebrafish: III. Intestinal epithelium morphogenesis.
Developmental biology 2005;286(1):114-35.
2005: Beis Dimitris; Bartman Thomas; Jin Suk-Won; Scott Ian C; D'Amico Leonard A; Ober Elke A; Verkade Heather; Frantsve Julie; Field Holly A; Wehman Ann; Baier Herwig; Tallafuss Alexandra; Bally-Cuif Laure; Chen Jau-Nian; Stainier Didier Y R; Jungblut Benno
Genetic and cellular analyses of zebrafish atrioventricular cushion and valve development.
Development (Cambridge, England) 2005;132(18):4193-204.
2005: Bree Ronan T; McLoughlin Sarah; Jin Suk-Won; McMeel Oonagh M; Stainier Didier Y R; Grealy Maura; Byrnes Lucy
nanor, a novel zygotic gene, is expressed initially at the midblastula transition in zebrafish.
Biochemical and biophysical research communications 2005;333(3):722-8.
2005: Qian Feng; Zhen Fenghua; Ong Chinthing; Jin Suk-Won; Meng Soo Hui; Stainier Didier Y R; Lin Shuo; Peng Jinrong; Wen Zilong
Microarray analysis of zebrafish cloche mutant using amplified cDNA and identification of potential downstream target genes.
Developmental dynamics : an official publication of the American Association of Anatomists 2005;233(3):1163-72.
2005: Stainier Didier Y R
No organ left behind: tales of gut development and evolution.
Science (New York, N.Y.) 2005;307(5717):1902-4.
2005: Trinh Le A; Yelon Deborah; Stainier Didier Y R
Hand2 regulates epithelial formation during myocardial diferentiation.
Current biology : CB 2005;15(5):441-6.
2004: Bartman Thomas; Walsh Emily C; Wen Kuo-Kuang; McKane Melissa; Ren Jihui; Alexander Jonathan; Rubenstein Peter A; Stainier Didier Y R
Early myocardial function affects endocardial cushion development in zebrafish.
PLoS biology 2004;2(5):E129.
2004: Parker Leon H; Schmidt Maike; Jin Suk-Won; Gray Alane M; Beis Dimitris; Pham Thinh; Frantz Gretchen; Palmieri Susan; Hillan Kenneth; Stainier Didier Y R; De Sauvage Frederic J; Ye Weilan
The endothelial-cell-derived secreted factor Egfl7 regulates vascular tube formation.
Nature 2004;428(6984):754-8.
2004: Kikuchi Yutaka; Verkade Heather; Reiter Jeremy F; Kim Cheol-Hee; Chitnis Ajay B; Kuroiwa Atsushi; Stainier Didier Y R
Notch signaling can regulate endoderm formation in zebrafish.
Developmental dynamics : an official publication of the American Association of Anatomists 2004;229(4):756-62.
2004: Trinh L A; Stainier Didier Y R
Fibronectin regulates epithelial organization during myocardial migration in zebrafish.
Developmental cell 2004;6(3):371-82.
2004: Ober Elke A; Olofsson Birgitta; Mäkinen Taija; Jin Suk-Won; Shoji Wataru; Koh Gou Young; Alitalo Kari; Stainier Didier Y R
Vegfc is required for vascular development and endoderm morphogenesis in zebrafish.
EMBO reports 2004;5(1):78-84.
2004: Trinh Le A; Stainier Didier Y R
Cardiac development.
Methods in cell biology 2004;76():455-73.
2003: Berdougo Eli; Coleman Hope; Lee Diana H; Stainier Didier Y R; Yelon Deborah
Mutation of weak atrium/atrial myosin heavy chain disrupts atrial function and influences ventricular morphogenesis in zebrafish.
Development (Cambridge, England) 2003;130(24):6121-9.
2003: Horne-Badovinac Sally; Rebagliati Michael; Stainier Didier Y R
A cellular framework for gut-looping morphogenesis in zebrafish.
Science (New York, N.Y.) 2003;302(5645):662-5.
2003: Scott Ian C; Stainier Didier Y R
Developmental biology: twisting the body into shape.
Nature 2003;425(6957):461-3.
2003: Trinh L A; Meyer Dirk; Stainier Didier Y R
The Mix family homeodomain gene bonnie and clyde functions with other components of the Nodal signaling pathway to regulate neural patterning in zebrafish.
Development (Cambridge, England) 2003;130(20):4989-98.
2003: Field Holly A; Dong P D Si; Beis Dimitris; Stainier Didier Y R
Formation of the digestive system in zebrafish. II. Pancreas morphogenesis.
Developmental biology 2003;261(1):197-208.
2003: Stainier Didier Y R; Pourquié Olivier
Entrails, heart, brain, limbs, and lymphatics- a recipe for success?
Developmental cell 2003;5(2):193-6.
2003: Tidyman William E; Sehnert Amy J; Huq Anja; Agard Jennifer; Deegan Fiona; Stainier Didier Y R; Ordahl Charles P
In vivo regulation of the chicken cardiac troponin T gene promoter in zebrafish embryos.
Developmental dynamics : an official publication of the American Association of Anatomists 2003;227(4):484-96.
2003: Miller Craig T; Yelon Deborah; Stainier Didier Y R; Kimmel Charles B
Two endothelin 1 effectors, hand2 and bapx1, pattern ventral pharyngeal cartilage and the jaw joint.
Development (Cambridge, England) 2003;130(7):1353-65.
2003: Field Holly A; Ober Elke A; Roeser Tobias; Stainier Didier Y R
Formation of the digestive system in zebrafish. I. Liver morphogenesis.
Developmental biology 2003;253(2):279-90.
2003: Ober Elke A; Field Holly A; Stainier Didier Y R
From endoderm formation to liver and pancreas development in zebrafish.
Mechanisms of development 2003;120(1):5-18.
2003: Osborne Nick; Stainier Didier Y R
Lipid receptors in cardiovascular development.
Annual review of physiology 2003;65():23-43.
2002: Scott Ian C; Stainier Didier Y R
Development. Fishing out a new heart.
Science (New York, N.Y.) 2002;298(5601):2141-2.
2002: Yelon Deborah; Stainier Didier Y R
Pattern formation: swimming in retinoic acid.
Current biology : CB 2002;12(20):R707-9.
2002: Sehnert Amy J; Stainier Didier Y R
A window to the heart: can zebrafish mutants help us understand heart disease in humans?
Trends in genetics : TIG 2002;18(10):491-4.
2002: Sehnert Amy J; Huq Anja; Weinstein Brant M; Walker Charline; Fishman Mark; Stainier Didier Y R
Cardiac troponin T is essential in sarcomere assembly and cardiac contractility.
Nature genetics 2002;31(1):106-10.
2002: Stainier Didier Y R
A glimpse into the molecular entrails of endoderm formation.
Genes & development 2002;16(8):893-907.
2002: Keegan Brian R; Feldman Jessica L; Lee Diana H; Koos David S; Ho Robert K; Stainier Didier Y R; Yelon Deborah
The elongation factors Pandora/Spt6 and Foggy/Spt5 promote transcription in the zebrafish embryo.
Development (Cambridge, England) 2002;129(7):1623-32.
2002: Stainier D Y; Beis D; Jungblut B; Bartman T
Endocardial cushion formation in zebrafish.
Cold Spring Harbor symposia on quantitative biology 2002;67():49-56.
2002: Warga Rachel M; Stainier Didier Y R
The guts of endoderm formation.
Results and problems in cell differentiation 2002;40():28-47.
2001: Horne-Badovinac S; Lin D; Waldron S; Schwarz M; Mbamalu G; Pawson T; Jan Y; Stainier D Y; Abdelilah-Seyfried S
Positional cloning of heart and soul reveals multiple roles for PKC lambda in zebrafish organogenesis.
Current biology : CB 2001;11(19):1492-502.
2001: Walsh E C; Stainier D Y
UDP-glucose dehydrogenase required for cardiac valve formation in zebrafish.
Science (New York, N.Y.) 2001;293(5535):1670-3.
2001: Kikuchi Y; Agathon A; Alexander J; Thisse C; Waldron S; Yelon D; Thisse B; Stainier D Y
casanova encodes a novel Sox-related protein necessary and sufficient for early endoderm formation in zebrafish.
Genes & development 2001;15(12):1493-505.
2001: Reiter J F; Verkade H; Stainier D Y
Bmp2b and Oep promote early myocardial differentiation through their regulation of gata5.
Developmental biology 2001;234(2):330-8.
2001: Stainier D Y
Zebrafish genetics and vertebrate heart formation.
Nature reviews. Genetics 2001;2(1):39-48.
2001: Reiter J F; Kikuchi Y; Stainier D Y
Multiple roles for Gata5 in zebrafish endoderm formation.
Development (Cambridge, England) 2001;128(1):125-35.
2000: Liao W; Ho C Y; Yan Y L; Postlethwait J; Stainier D Y
Hhex and scl function in parallel to regulate early endothelial and blood differentiation in zebrafish.
Development (Cambridge, England) 2000;127(20):4303-13.
2000: Kupperman E; An S; Osborne N; Waldron S; Stainier D Y
A sphingosine-1-phosphate receptor regulates cell migration during vertebrate heart development.
Nature 2000;406(6792):192-5.
2000: Yelon D; Ticho B; Halpern M E; Ruvinsky I; Ho R K; Silver L M; Stainier D Y
The bHLH transcription factor hand2 plays parallel roles in zebrafish heart and pectoral fin development.
Development (Cambridge, England) 2000;127(12):2573-82.
2000: Kikuchi Y; Trinh L A; Reiter J F; Alexander J; Yelon D; Stainier D Y
The zebrafish bonnie and clyde gene encodes a Mix family homeodomain protein that regulates the generation of endodermal precursors.
Genes & development 2000;14(10):1279-89.
2000: Griffin K J; Stoller J; Gibson M; Chen S; Yelon D; Stainier D Y; Kimelman D
A conserved role for H15-related T-box transcription factors in zebrafish and Drosophila heart formation.
Developmental biology 2000;218(2):235-47.
2000: Reifers F; Walsh E C; Léger S; Stainier D Y; Brand M
Induction and differentiation of the zebrafish heart requires fibroblast growth factor 8 (fgf8/acerebellar).
Development (Cambridge, England) 2000;127(2):225-35.
1999: Reiter J F; Alexander J; Rodaway A; Yelon D; Patient R; Holder N; Stainier D Y
Gata5 is required for the development of the heart and endoderm in zebrafish.
Genes & development 1999;13(22):2983-95.
1999: Alexander J; Stainier D Y
A molecular pathway leading to endoderm formation in zebrafish.
Current biology : CB 1999;9(20):1147-57.
1999: Yelon D; Horne S A; Stainier D Y
Restricted expression of cardiac myosin genes reveals regulated aspects of heart tube assembly in zebrafish.
Developmental biology 1999;214(1):23-37.
1999: Parker L; Stainier D Y
Cell-autonomous and non-autonomous requirements for the zebrafish gene cloche in hematopoiesis.
Development (Cambridge, England) 1999;126(12):2643-51.
1999: Yelon D; Stainier D Y
Patterning during organogenesis: genetic analysis of cardiac chamber formation.
Seminars in cell & developmental biology 1999;10(1):93-8.
1999: Parker L H; Zon L I; Stainier D Y
Vascular and blood gene expression.
Methods in cell biology 1999;59():313-36.
1998: Reifers F; Böhli H; Walsh E C; Crossley P H; Stainier D Y; Brand M
Fgf8 is mutated in zebrafish acerebellar (ace) mutants and is required for maintenance of midbrain-hindbrain boundary development and somitogenesis.
Development (Cambridge, England) 1998;125(13):2381-95.
1998: Alexander J; Stainier D Y; Yelon D
Screening mosaic F1 females for mutations affecting zebrafish heart induction and patterning.
Developmental genetics 1998;22(3):288-99.
1997: Liao W; Bisgrove B W; Sawyer H; Hug B; Bell B; Peters K; Grunwald D J; Stainier D Y
The zebrafish gene cloche acts upstream of a flk-1 homologue to regulate endothelial cell differentiation.
Development (Cambridge, England) 1997;124(2):381-9.

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Didier Stainier

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