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Mark Stapleton

Research Profile

Genes & Molecular Sequences

Chemicals & Drugs

Procedures

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Publications

TOP 3
K G Guruharsha; Steven P Gygi; Bhaveen Kapadia; Emily McKillip; Julian Mintseris; Bob Obar; Bayan Parsa; David Y Rhee; Jean-François Rual; Saumini Shah; Mark Stapleton; Namita Vaidya; Pujita Vaidya; KV VijayRaghavan; Kenneth H Wan; Christina Wong; Charles Yu; Bo Zhai; Chapman Beekman; Joseph W Carlson; Susan E Celniker; Odise Cenaj; Xiao Chen; Spyros Artavanis-Tsakonas
A protein complex network of Drosophila melanogaster.
Stewart MacArthur; Xiao-Yong Li; Jingyi Li; James B Brown; Hou Cheng Chu; Lucy Zeng; Brandi P Grondona; Aaron Hechmer; Lisa Simirenko; Soile V E Keränen; David W Knowles; Mark Stapleton; Peter Bickel; Mark D Biggin; Michael B Eisen
Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions.
Xiao-yong Li; Stewart MacArthur; Richard Bourgon; David A Nix; Daniel A Pollard; Venky N Iyer; Aaron Hechmer; Lisa Simirenko; Mark Stapleton; Cris L Luengo Hendriks; Hou Cheng Chu; Nobuo Ogawa; William Inwood; Victor Sementchenko; Amy Beaton; Richard Weiszmann; Susan E Celniker; David W Knowles; Tom Gingeras; Terence P Speed; Michael B Eisen; Mark D Biggin
Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm.

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All Publications

2011: K G Guruharsha; Steven P Gygi; Bhaveen Kapadia; Emily McKillip; Julian Mintseris; Bob Obar; Bayan Parsa; David Y Rhee; Jean-François Rual; Saumini Shah; Mark Stapleton; Namita Vaidya; Pujita Vaidya; KV VijayRaghavan; Kenneth H Wan; Christina Wong; Charles Yu; Bo Zhai; Chapman Beekman; Joseph W Carlson; Susan E Celniker; Odise Cenaj; Xiao Chen; Spyros Artavanis-Tsakonas
A protein complex network of Drosophila melanogaster.
Cell 2011;147(3):690-703.
2009: Stewart MacArthur; Xiao-Yong Li; Jingyi Li; James B Brown; Hou Cheng Chu; Lucy Zeng; Brandi P Grondona; Aaron Hechmer; Lisa Simirenko; Soile V E Keränen; David W Knowles; Mark Stapleton; Peter Bickel; Mark D Biggin; Michael B Eisen
Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions.
Genome biology 2009;10(7):R80.
2008: Xiao-yong Li; Stewart MacArthur; Richard Bourgon; David A Nix; Daniel A Pollard; Venky N Iyer; Aaron Hechmer; Lisa Simirenko; Mark Stapleton; Cris L Luengo Hendriks; Hou Cheng Chu; Nobuo Ogawa; William Inwood; Victor Sementchenko; Amy Beaton; Richard Weiszmann; Susan E Celniker; David W Knowles; Tom Gingeras; Terence P Speed; Michael B Eisen; Mark D Biggin
Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm.
PLoS biology 2008;6(2):e27.
2006: Mark Stapleton; Joseph W Carlson; Susan E Celniker
RNA editing in Drosophila melanogaster: New targets and functional consequences.
RNA (New York, N.Y.) 2006;12(11):1922-32.
2006: Kenneth H Wan; Charles Yu; Reed A George; Joseph W Carlson; Roger A Hoskins; Robert Svirskas; Mark Stapleton; Susan E Celniker
High-throughput plasmid cDNA library screening.
Nature protocols 2006;1(2):624-32.
2005: Roger A Hoskins; Mark Stapleton; Reed A George; Charles Yu; Kenneth H Wan; Joseph W Carlson; Susan E Celniker
Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP).
Nucleic acids research 2005;33(21):e185.
2004: Mark Stapleton
The lords of the genomes.
Genome biology 2004;5(10):349.
2002: Mark Stapleton; Guochun Liao; Peter Brokstein; Ling Hong; piero carninci; Toshiyuki Shiraki; Yoshihide Hayashizaki; Mark Champe; Joanne Pacleb; Ken Wan; Charles Yu; Joe Carlson; Reed George; Susan E Celniker; Gerald M Rubin
The Drosophila gene collection: identification of putative full-length cDNAs for 70% of D. melanogaster genes.
Genome research 2002;12(8):1294-300.
2002: Casey M Bergman; Barret D Pfeiffer; Diego E Rincón-Limas; Roger A Hoskins; Andreas Gnirke; Chris Mungall; Adrienne M Wang; Brent Kronmiller; Joanne Pacleb; Soo Park; Mark Stapleton; Ken Wan; Reed A George; Pieter J de Jong; Juan Botas; Gerald M Rubin; Susan E Celniker
Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome.
Genome biology 2002;3(12):RESEARCH0086.
2002: Sima Misra; Madeline A Crosby; Chris Mungall; Beverley B Matthews; Kathryn S Campbell; Pavel Hradecky; Yanmei Huang; Joshua S Kaminker; Gillian H Millburn; Simon Prochnik; Christopher D Smith; Jonathan L Tupy; Eleanor J Whitfied; Leyla Bayraktaroglu; Benjamin P Berman; Brian R Bettencourt; Susan E Celniker; Aubrey D N J de Grey; Rachel Drysdale; Nomi L Harris; John Richter; Susan Russo; Andrew J Schroeder; Sheng Qiang Shu; Mark Stapleton; Chihiro Yamada; Michael Ashburner; William M Gelbart; Gerald M Rubin; Suzanna E Lewis
Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.
Genome biology 2002;3(12):RESEARCH0083.
2002: Mark Stapleton; Joe Carlson; Peter Brokstein; Charles Yu; Mark Champe; Reed George; Hannibal Guarin; Brent Kronmiller; Joanne Pacleb; Soo Park; Ken Wan; Gerald M Rubin; Susan E Celniker
A Drosophila full-length cDNA resource.
Genome biology 2002;3(12):RESEARCH0080.
2000: Gerald M Rubin; L Hong; Peter Brokstein; Martha Evans-Holm; Erwin Frise; Mark Stapleton; D A Harvey
A Drosophila complementary DNA resource.
Science (New York, N.Y.) 2000;287(5461):2222-4.