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David Stillman

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Chemicals & Drugs

Living Beings

Saccharomyces cerevisiae

Physiology

Genes & Molecular Sequences

Fungal Genes

Concepts & Ideas

Molecular Sequence Data

Anatomy

Chromatin

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Co-Publications
Name
21
Yu, Yaxin
8
Voth, Warren
8
Biswas, Debabrata
7
Eriksson, Peter
7
Formosa, Tim
5
McBride, HJ
4
Brazas, Robert
4
Bhoite, Leena
3
Harata, Masahiko
3
Kasten, Margaret
3
Mitra, Doyel
3
Olsen, Aileen
3
Oma, Yukako
3
Roth, SY
3
Thomas, Lance

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Publications

TOP 3
Takahata Shinya; Yu Yaxin; Stillman David J
The E2F functional analogue SBF recruits the Rpd3(L) HDAC, via Whi5 and Stb1, and the FACT chromatin reorganizer, to yeast G1 cyclin promoters.
Pondugula Santhi; Neef Daniel W; Voth Warren P; Darst Russell P; Dhasarathy Archana; Reynolds M Megan; Takahata Shinya; Stillman David J; Kladde Michael P
Coupling phosphate homeostasis to cell cycle-specific transcription: mitotic activation of Saccharomyces cerevisiae PHO5 by Mcm1 and Forkhead proteins.
Xin Hua; Takahata Shinya; Blanksma Mary; McCullough Laura; Stillman David J; Formosa Tim
yFACT induces global accessibility of nucleosomal DNA without H2A-H2B displacement.

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All Publications

2009: Takahata Shinya; Yu Yaxin; Stillman David J
The E2F functional analogue SBF recruits the Rpd3(L) HDAC, via Whi5 and Stb1, and the FACT chromatin reorganizer, to yeast G1 cyclin promoters.
The EMBO journal 2009;28(21):3378-89.
2009: Pondugula Santhi; Neef Daniel W; Voth Warren P; Darst Russell P; Dhasarathy Archana; Reynolds M Megan; Takahata Shinya; Stillman David J; Kladde Michael P
Coupling phosphate homeostasis to cell cycle-specific transcription: mitotic activation of Saccharomyces cerevisiae PHO5 by Mcm1 and Forkhead proteins.
Molecular and cellular biology 2009;29(18):4891-905.
2009: Xin Hua; Takahata Shinya; Blanksma Mary; McCullough Laura; Stillman David J; Formosa Tim
yFACT induces global accessibility of nucleosomal DNA without H2A-H2B displacement.
Molecular cell 2009;35(3):365-76.
2009: Takahata Shinya; Yu Yaxin; Stillman David J
FACT and Asf1 regulate nucleosome dynamics and coactivator binding at the HO promoter.
Molecular cell 2009;34(4):405-15.
2008: Parnell Emily J; Stillman David J
Getting a transcription factor to only one nucleus following mitosis.
PLoS biology 2008;6(9):e229.
2008: Biswas Debabrata; Takahata Shinya; Stillman David J
Different genetic functions for the Rpd3(L) and Rpd3(S) complexes suggest competition between NuA4 and Rpd3(S).
Molecular and cellular biology 2008;28(14):4445-58.
2008: Sbia Mohammed; Parnell Emily J; Yu Yaxin; Olsen Aileen E; Kretschmann Kelsi L; Voth Warren P; Stillman David J
Regulation of the yeast Ace2 transcription factor during the cell cycle.
The Journal of biological chemistry 2008;283(17):11135-45.
2008: Biswas Debabrata; Takahata Shinya; Xin Hua; Dutta-Biswas Rinku; Yu Yaxin; Formosa Tim; Stillman David J
A role for Chd1 and Set2 in negatively regulating DNA replication in Saccharomyces cerevisiae.
Genetics 2008;178(2):649-59.
2008: VanDemark Andrew P; Xin Hua; McCullough Laura; Rawlins Robert; Bentley Shayla; Heroux Annie; Stillman David J; Hill Christopher P; Formosa Tim
Structural and functional analysis of the Spt16p N-terminal domain reveals overlapping roles of yFACT subunits.
The Journal of biological chemistry 2008;283(8):5058-68.
2007: Voth Warren P; Yu Yaxin; Takahata Shinya; Kretschmann Kelsi L; Lieb Jason D; Parker Rebecca L; Milash Brett; Stillman David J
Forkhead proteins control the outcome of transcription factor binding by antiactivation.
The EMBO journal 2007;26(20):4324-34.
2007: Biswas Debabrata; Dutta-Biswas Rinku; Stillman David J
Chd1 and yFACT act in opposition in regulating transcription.
Molecular and cellular biology 2007;27(18):6279-87.
2006: Biswas Debabrata; Dutta-Biswas Rinku; Mitra Doyel; Shibata Yoichiro; Strahl Brian D; Formosa Tim; Stillman David J
Opposing roles for Set2 and yFACT in regulating TBP binding at promoters.
The EMBO journal 2006;25(19):4479-89.
2006: Mitra Doyel; Parnell Emily J; Landon Jack W; Yu Yaxin; Stillman David J
SWI/SNF binding to the HO promoter requires histone acetylation and stimulates TATA-binding protein recruitment.
Molecular and cellular biology 2006;26(11):4095-110.
2006: Biswas Debabrata; Yu Yaxin; Mitra Doyel; Stillman David J
Genetic interactions between Nhp6 and Gcn5 with Mot1 and the Ccr4-Not complex that regulate binding of TATA-binding protein in Saccharomyces cerevisiae.
Genetics 2006;172(2):837-49.
2005: Biswas Debabrata; Yu Yaxin; Prall Matthew; Formosa Tim; Stillman David J
The yeast FACT complex has a role in transcriptional initiation.
Molecular and cellular biology 2005;25(14):5812-22.
2005: Voth Warren P; Olsen Aileen E; Sbia Mohammed; Freedman Karen H; Stillman David J
ACE2, CBK1, and BUD4 in budding and cell separation.
Eukaryotic cell 2005;4(6):1018-28.
2004: Biswas Debabrata; Imbalzano Anthony N; Eriksson Peter; Yu Yaxin; Stillman David J
Role for Nhp6, Gcn5, and the Swi/Snf complex in stimulating formation of the TATA-binding protein-TFIIA-DNA complex.
Molecular and cellular biology 2004;24(18):8312-21.
2004: Eriksson Peter; Biswas Debabrata; Yu Yaxin; Stewart James M; Stillman David J
TATA-binding protein mutants that are lethal in the absence of the Nhp6 high-mobility-group protein.
Molecular and cellular biology 2004;24(14):6419-29.
2004: Bird Amanda J; Blankman Elizabeth; Stillman David J; Eide David J; Winge Dennis R
The Zap1 transcriptional activator also acts as a repressor by binding downstream of the TATA box in ZRT2.
The EMBO journal 2004;23(5):1123-32.
2004: Eriksson Peter; Thomas Lance R; Thorburn Andrew; Stillman David J
pRS yeast vectors with a LYS2 marker.
BioTechniques 2004;36(2):212-3.
2003: Voth Warren P; Stillman David J
Changes in developmental state: demolish the old to construct the new.
Genes & development 2003;17(18):2201-4.
2003: Voth Warren P; Jiang Yi Wei; Stillman David J
New 'marker swap' plasmids for converting selectable markers on budding yeast gene disruptions and plasmids.
Yeast (Chichester, England) 2003;20(11):985-93.
2003: Yu Yaxin; Eriksson Peter; Bhoite Leena T; Stillman David J
Regulation of TATA-binding protein binding by the SAGA complex and the Nhp6 high-mobility group protein.
Molecular and cellular biology 2003;23(6):1910-21.
2002: Formosa Tim; Ruone Susan; Adams Melissa D; Olsen Aileen E; Eriksson Peter; Yu Yaxin; Rhoades Alison R; Kaufman Paul D; Stillman David J
Defects in SPT16 or POB3 (yFACT) in Saccharomyces cerevisiae cause dependence on the Hir/Hpc pathway: polymerase passage may degrade chromatin structure.
Genetics 2002;162(4):1557-71.
2002: Bhoite Leena T; Allen Jason M; Garcia Emily; Thomas Lance R; Gregory I David; Voth Warren P; Whelihan Kristen; Rolfes Ronda J; Stillman David J
Mutations in the pho2 (bas2) transcription factor that differentially affect activation with its partner proteins bas1, pho4, and swi5.
The Journal of biological chemistry 2002;277(40):37612-8.
2002: Hannum Charles; Kulaeva Olga I; Sun Helen; Urbanowski Jennifer L; Wendus Ashley; Stillman David J; Rolfes Ronda J
Functional mapping of Bas2. Identification of activation and Bas1-interaction domains.
The Journal of biological chemistry 2002;277(37):34003-9.
2002: Thomas Lance R; Stillman David J; Thorburn Andrew
Regulation of Fas-associated death domain interactions by the death effector domain identified by a modified reverse two-hybrid screen.
The Journal of biological chemistry 2002;277(37):34343-8.
2002: Harata Masahiko; Zhang Yan; Stillman David J; Matsui Daisuke; Oma Yukako; Nishimori Katsuhiko; Mochizuki Ryo
Correlation between chromatin association and transcriptional regulation for the Act3p/Arp4 nuclear actin-related protein of Saccharomyces cerevisiae.
Nucleic acids research 2002;30(8):1743-50.
2001: McBride H J; Sil A; Measday V; Yu Y; Moffat J; Maxon M E; Herskowitz I; Andrews B; Stillman D J
The protein kinase Pho85 is required for asymmetric accumulation of the Ash1 protein in Saccharomyces cerevisiae.
Molecular microbiology 2001;42(2):345-53.
2001: Bhoite L T; Yu Y; Stillman D J
The Swi5 activator recruits the Mediator complex to the HO promoter without RNA polymerase II.
Genes & development 2001;15(18):2457-69.
2001: Formosa T; Eriksson P; Wittmeyer J; Ginn J; Yu Y; Stillman D J
Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.
The EMBO journal 2001;20(13):3506-17.
2001: Voth W P; Richards J D; Shaw J M; Stillman D J
Yeast vectors for integration at the HO locus.
Nucleic acids research 2001;29(12):E59-9.
2000: Watson A D; Edmondson D G; Bone J R; Mukai Y; Yu Y; Du W; Stillman D J; Roth S Y
Ssn6-Tup1 interacts with class I histone deacetylases required for repression.
Genes & development 2000;14(21):2737-44.
2000: Harata M; Oma Y; Tabuchi T; Zhang Y; Stillman D J; Mizuno S
Multiple actin-related proteins of Saccharomyces cerevisiae are present in the nucleus.
Journal of biochemistry 2000;128(4):665-71.
2000: Zhang D Y; Dorsey M J; Voth W P; Carson D J; Zeng X; Stillman D J; Ma J
Intramolecular interaction of yeast TFIIB in transcription control.
Nucleic acids research 2000;28(9):1913-20.
2000: Yu Y; Eriksson P; Stillman D J
Architectural transcription factors and the SAGA complex function in parallel pathways to activate transcription.
Molecular and cellular biology 2000;20(7):2350-7.
2000: Meimoun A; Holtzman T; Weissman Z; McBride H J; Stillman D J; Fink G R; Kornitzer D
Degradation of the transcription factor Gcn4 requires the kinase Pho85 and the SCF(CDC4) ubiquitin-ligase complex.
Molecular biology of the cell 2000;11(3):915-27.
2000: Measday V; McBride H; Moffat J; Stillman D; Andrews B
Interactions between Pho85 cyclin-dependent kinase complexes and the Swi5 transcription factor in budding yeast.
Molecular microbiology 2000;35(4):825-34.
2000: Dorland S; Deegenaars M L; Stillman D J
Roles for the Saccharomyces cerevisiae SDS3, CBK1 and HYM1 genes in transcriptional repression by SIN3.
Genetics 2000;154(2):573-86.
1999: Harata M; Oma Y; Mizuno S; Jiang Y W; Stillman D J; Wintersberger U
The nuclear actin-related protein of Saccharomyces cerevisiae, Act3p/Arp4, interacts with core histones.
Molecular biology of the cell 1999;10(8):2595-605.
1999: McBride H J; Yu Y; Stillman D J
Distinct regions of the Swi5 and Ace2 transcription factors are required for specific gene activation.
The Journal of biological chemistry 1999;274(30):21029-36.
1998: Bhoite L T; Stillman D J
Residues in the Swi5 zinc finger protein that mediate cooperative DNA binding with the Pho2 homeodomain protein.
Molecular and cellular biology 1998;18(11):6436-46.
1998: Edmondson D G; Zhang W; Watson A; Xu W; Bone J R; Yu Y; Stillman D; Roth S Y
In vivo functions of histone acetylation/deacetylation in Tup1p repression and Gcn5p activation.
Cold Spring Harbor symposia on quantitative biology 1998;63():459-68.
1997: Kasten M M; Stillman D J
Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding proteins.
Molecular & general genetics : MGG 1997;256(4):376-86.
1997: Kasten M M; Dorland S; Stillman D J
A large protein complex containing the yeast Sin3p and Rpd3p transcriptional regulators.
Molecular and cellular biology 1997;17(8):4852-8.
1997: McBride H J; Brazas R M; Yu Y; Nasmyth K; Stillman D J
Long-range interactions at the HO promoter.
Molecular and cellular biology 1997;17(5):2669-78.
1997: Macatee T; Jiang Y W; Stillman D J; Roth S Y
Global alterations in chromatin accessibility associated with loss of SIN4 function.
Nucleic acids research 1997;25(6):1240-7.
1997: Davis D R; Stillman D J
Altered structure of the DNA duplex recognized by yeast transcription factor Reb1p.
Nucleic acids research 1997;25(3):668-74.
1996: Yu Y; Jiang Y W; Wellinger R J; Carlson K; Roberts J M; Stillman D J
Mutations in the homologous ZDS1 and ZDS2 genes affect cell cycle progression.
Molecular and cellular biology 1996;16(10):5254-63.
1996: Kasten M M; Ayer D E; Stillman D J
SIN3-dependent transcriptional repression by interaction with the Mad1 DNA-binding protein.
Molecular and cellular biology 1996;16(8):4215-21.
1996: Yu W; Farrell R A; Stillman D J; Winge D R
Identification of SLF1 as a new copper homeostasis gene involved in copper sulfide mineralization in Saccharomyces cerevisiae.
Molecular and cellular biology 1996;16(5):2464-72.
1996: Dohrmann P R; Voth W P; Stillman D J
Role of negative regulation in promoter specificity of the homologous transcriptional activators Ace2p and Swi5p.
Molecular and cellular biology 1996;16(4):1746-58.
1996: Jiang Y W; Stillman D J
Epigenetic effects on yeast transcription caused by mutations in an actin-related protein present in the nucleus.
Genes & development 1996;10(5):604-19.
1995: Brazas R M; Bhoite L T; Murphy M D; Yu Y; Chen Y; Neklason D W; Stillman D J
Determining the requirements for cooperative DNA binding by Swi5p and Pho2p (Grf10p/Bas2p) at the HO promoter.
The Journal of biological chemistry 1995;270(49):29151-61.
1995: Li Y; Bjorklund S; Jiang Y W; Kim Y J; Lane W S; Stillman D J; Kornberg R D
Yeast global transcriptional regulators Sin4 and Rgr1 are components of mediator complex/RNA polymerase II holoenzyme.
Proceedings of the National Academy of Sciences of the United States of America 1995;92(24):10864-8.
1995: Jiang Y W; Dohrmann P R; Stillman D J
Genetic and physical interactions between yeast RGR1 and SIN4 in chromatin organization and transcriptional regulation.
Genetics 1995;140(1):47-54.
1995: Jiang Y W; Stillman D J
Regulation of HIS4 expression by the Saccharomyces cerevisiae SIN4 transcriptional regulator.
Genetics 1995;140(1):103-14.
1994: Wang H; Reynolds-Hager L; Stillman D J
Genetic interactions between SIN3 mutations and the Saccharomyces cerevisiae transcriptional activators encoded by MCM1, STE12, and SWI1.
Molecular & general genetics : MGG 1994;245(6):675-85.
1994: Stillman D J; Dorland S; Yu Y
Epistasis analysis of suppressor mutations that allow HO expression in the absence of the yeast SW15 transcriptional activator.
Genetics 1994;136(3):781-8.
1993: Brazas R M; Stillman D J
The Swi5 zinc-finger and Grf10 homeodomain proteins bind DNA cooperatively at the yeast HO promoter.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(23):11237-41.
1993: Brazas R M; Stillman D J
Identification and purification of a protein that binds DNA cooperatively with the yeast SWI5 protein.
Molecular and cellular biology 1993;13(9):5524-37.
1993: Wang H; Stillman D J
Transcriptional repression in Saccharomyces cerevisiae by a SIN3-LexA fusion protein.
Molecular and cellular biology 1993;13(3):1805-14.
1992: Jiang Y W; Stillman D J
Involvement of the SIN4 global transcriptional regulator in the chromatin structure of Saccharomyces cerevisiae.
Molecular and cellular biology 1992;12(10):4503-14.
1992: Mayer M P; Hahn F M; Stillman D J; Poulter C D
Disruption and mapping of IDI1, the gene for isopentenyl diphosphate isomerase in Saccharomyces cerevisiae.
Yeast (Chichester, England) 1992;8(9):743-8.
1992: Dohrmann P R; Butler G; Tamai K; Dorland S; Greene J R; Thiele D J; Stillman D J
Parallel pathways of gene regulation: homologous regulators SWI5 and ACE2 differentially control transcription of HO and chitinase.
Genes & development 1992;6(1):93-104.
1990: Wang H; Stillman D J
In vitro regulation of a SIN3-dependent DNA-binding activity by stimulatory and inhibitory factors.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(24):9761-5.
1990: Wang H; Clark I; Nicholson P R; Herskowitz I; Stillman D J
The Saccharomyces cerevisiae SIN3 gene, a negative regulator of HO, contains four paired amphipathic helix motifs.
Molecular and cellular biology 1990;10(11):5927-36.
1990: Wang H; Nicholson P R; Stillman D J
Identification of a Saccharomyces cerevisiae DNA-binding protein involved in transcriptional regulation.
Molecular and cellular biology 1990;10(4):1743-53.

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