FIND

researchers

DISCOVER

relevant articles

PROMOTE

your research

now for free

Marc Suchard

Research Profile

Concepts & Ideas

Phenomena

Evolution, Molecular

Occupations

Activities & Behaviors

Living Beings

Co-author Network

Publications

TOP 3
Forrest W Crawford; Marc A Suchard
Diversity, disparity, and evolutionary rate estimation for unresolved Yule trees.
Gabriela B Cybis; Philippe Lemey; Janet S Sinsheimer; Marc A Suchard
Graph hierarchies for phylogeography.
Nuno Rodrigues Faria; Andrew Rambaut; Daniel G Streicker; Marc A Suchard; Philippe Lemey
Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints.

Register for free to view:

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the research activity
of experts around the globe

Geonetwork of Marc Suchard (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

All Publications

2013: Forrest W Crawford; Marc A Suchard
Diversity, disparity, and evolutionary rate estimation for unresolved Yule trees.
Systematic biology 2013;62(3):439-55.
2013: Gabriela B Cybis; Philippe Lemey; Janet S Sinsheimer; Marc A Suchard
Graph hierarchies for phylogeography.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2013;368(1614):20120206.
2013: Nuno Rodrigues Faria; Andrew Rambaut; Daniel G Streicker; Marc A Suchard; Philippe Lemey
Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2013;368(1614):20120196.
2013: Chieh-Hsi Wu; Marc A Suchard; Alexei J Drummond
Bayesian selection of nucleotide substitution models and their site assignments.
Molecular biology and evolution 2013;30(3):669-88.
2013: Mandev S Gill; Philippe Lemey; Andrew Rambaut; Beth Shapiro; Nuno R Faria; Marc A Suchard
Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci.
Molecular biology and evolution 2013;30(3):713-24.
2013: Guy Baele; Alexei J Drummond; Wai Lok Sibon Li; Marc A Suchard; Philippe Lemey
Accurate model selection of relaxed molecular clocks in bayesian phylogenetics.
Molecular biology and evolution 2013;30(2):239-43.
2012: Philippe Lemey; Vladimir N Minin; Filip Bielejec; Sergei L Kosakovsky Pond; Marc A Suchard
A counting renaissance: combining stochastic mapping and empirical Bayes to quickly detect amino acid sites under positive selection.
Bioinformatics (Oxford, England) 2012;28(24):3248-56.
2012: Kimdar S. Kemal; Thomas Klimkait; Douglas Mayers; Vladimir N Minin; Katarina Petrovic; Christina M Ramirez; Marc A Suchard; Kathryn Anastos; Harold Burger; Brian Foley; François Hamy; Barbara Weiser
Recombination between variants from genital tract and plasma: evolution of multidrug-resistant HIV type 1.
AIDS research and human retroviruses 2012;28(12):1766-74.
2012: Marcio Roberto Teixeira Nunes; Eliana Vieira Pinto da Silva; Sueli Guerreiro Rodrigues; Clayton Pereira Silva de Lima; Edivaldo Costa Sousa; Marc A Suchard; Helena Baldez Vasconcelos; Ana Abecasis; Jedson Ferreira Cardoso; Valéria Lima Carvalho; Nuno Rodrigues Faria; Philippe Lemey; Daniele Barbosa de Almeida Medeiros; Keley Nascimento Barbosa Nunes; Pedro Fernando da Costa Vasconcelos
Phylogeography of dengue virus serotype 4, Brazil, 2010-2011.
Emerging infectious diseases 2012;18(11):1858-64.
2012: Guy Baele; Trevor Bedford; Philippe Lemey; Andrew Rambaut; Marc A Suchard; Alexander V Alekseyenko
Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty.
Molecular biology and evolution 2012;29(9):2157-67.
2012: Forrest W Crawford; Marc A Suchard
Transition probabilities for general birth-death processes with applications in ecology, genetics, and evolution.
Journal of mathematical biology 2012;65(3):553-80.
2012: Remco Bouckaert; Alexei J Drummond; Michael Dunn; Russell D Gray; Simon J Greenhill; Philippe Lemey; Marc A Suchard; Alexander V Alekseyenko; Quentin D Atkinson
Mapping the origins and expansion of the Indo-European language family.
Science (New York, N.Y.) 2012;337(6097):957-60.
2012: Jennifer A Tom; Janet S Sinsheimer; Marc A Suchard
Does history repeat itself? Wavelets and the phylodynamics of influenza A.
Molecular biology and evolution 2012;29(5):1367-77.
2012: Nuno R Faria; Maria F Gonçalves; Patrick Goubau; Ioannis Hodges-Mameletzis; Sabelle Jallow; Ricardo Camacho; João D de Sousa; Smit Erasmus; Stefania Paolucci; Danuta Pieniazek; Berta Rodés; Jean Ruelle; Joana C Silva; Vincent Soriano; Marc A Suchard; Nuno Taveira; Ana Treviño; Anne-Mieke Vandamme; Li Xu; Philippe Lemey
Phylogeographical footprint of colonial history in the global dispersal of human immunodeficiency virus type 2 group A.
The Journal of general virology 2012;93(Pt 4):889-99.
2012: Nuno R Faria; Ana Abecasis; Idalina Bonfim; Ricardo Camacho; Nicaise Ndembi; João D Sousa; Marc A Suchard; Anne-Mieke Vandamme; Philippe Lemey
Phylodynamics of the HIV-1 CRF02_AG clade in Cameroon.
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2012;12(2):453-60.
2011: Robert E Weiss; Juan Jia; Marc A Suchard
A Bayesian model for the common effects of multiple predictors on mixed outcomes.
Interface focus 2011;1(6):886-94.
2011: Nuno Rodrigues Faria; Andrew Rambaut; Marc A Suchard; Philippe Lemey
Toward a quantitative understanding of viral phylogeography.
Current opinion in virology 2011;1(5):423-9.
2011: Filip Bielejec; Andrew Rambaut; Marc A Suchard; Philippe Lemey
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics.
Bioinformatics (Oxford, England) 2011;27(20):2910-2.
2011: John P Huelsenbeck; Michael E Alfaro; Marc A Suchard
Biologically inspired phylogenetic models strongly outperform the no common mechanism model.
Systematic biology 2011;60(2):225-32.
2010: Erik W Bloomquist; Marc A Suchard
Unifying vertical and nonvertical evolution: a stochastic ARG-based framework.
Systematic biology 2010;59(1):27-41.
2009: Li-Jung Liang; Robert E Weiss; Benjamin Redelings; Marc A Suchard
Improving phylogenetic analyses by incorporating additional information from genetic sequence databases.
Bioinformatics (Oxford, England) 2009;25(19):2530-6.
2009: Marc A Suchard; Andrew Rambaut
Many-core algorithms for statistical phylogenetics.
Bioinformatics (Oxford, England) 2009;25(11):1370-6.
2009: John D O'Brien; Vladimir N Minin; Marc A Suchard
Learning to count: robust estimates for labeled distances between molecular sequences.
Molecular biology and evolution 2009;26(4):801-14.
2008: Vladimir N Minin; Marc A Suchard
Fast, accurate and simulation-free stochastic mapping.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2008;363(1512):3985-95.
2008: Alexander V Alekseyenko; Christopher J Lee; Marc A Suchard
Wagner and Dollo: a stochastic duet by composing two parsimonious solos.
Systematic biology 2008;57(5):772-84.
2008: Vladimir N Minin; Erik W Bloomquist; Marc A Suchard
Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics.
Molecular biology and evolution 2008;25(7):1459-71.
2008: Navindra P Seeram; Yanjun Zhang; Rodney McKeever; Susanne M Henning; Ru-Po Lee; Marc A Suchard; Zhaoping Li; Steve Chen; Gail D Thames; Alona Zerlin; Martha Nguyen; David Wang; Mark Dreher; David Heber
Pomegranate juice and extracts provide similar levels of plasma and urinary ellagitannin metabolites in human subjects.
Journal of medicinal food 2008;11(2):390-4.
2008: Vladimir N Minin; Marc A Suchard
Counting labeled transitions in continuous-time Markov models of evolution.
Journal of mathematical biology 2008;56(3):391-412.
2008: Karen M Wong; Marc A Suchard; John P Huelsenbeck
Alignment uncertainty and genomic analysis.
Science (New York, N.Y.) 2008;319(5862):473-6.
2008: John D O'Brien; Zhen-Su She; Marc A Suchard
Dating the time of viral subtype divergence.
BMC evolutionary biology 2008;8():172.
2008: Christopher M Stanczak; Zugen Chen; Stanley F Nelson; Marc A Suchard; Edward R B McCabe; Sean McGhee
Representational oligonucleotide microarray analysis (ROMA) and comparison of binning and change-point methods of analysis: application to detection of del22q11.2 (DiGeorge) syndrome.
Human mutation 2008;29(1):176-81.
2007: John P Huelsenbeck; Marc A Suchard
A nonparametric method for accommodating and testing across-site rate variation.
Systematic biology 2007;56(6):975-87.
2007: Navindra P Seeram; William J Aronson; Yanjun Zhang; Susanne M Henning; Aune Moro; Ru-Po Lee; Maryam R Sartippour; Diane M Harris; Matthew B Rettig; Marc A Suchard; Allan J Pantuck; Arie Belldegrun; David Heber
Pomegranate ellagitannin-derived metabolites inhibit prostate cancer growth and localize to the mouse prostate gland.
Journal of agricultural and food chemistry 2007;55(19):7732-7.
2007: Joseph C Liao; Mitra Mastali; Yang Li; Vincent Gau; Marc A Suchard; Jane T Babbitt; Jeffrey Gornbein; Elliot M Landaw; Edward R B McCabe; Bernard M Churchill; David A Haake
Development of an advanced electrochemical DNA biosensor for bacterial pathogen detection.
The Journal of molecular diagnostics : JMD 2007;9(2):158-68.
2007: Vladimir N Minin; Karin S Dorman; Fang Fang; Marc A Suchard
Phylogenetic mapping of recombination hotspots in human immunodeficiency virus via spatially smoothed change-point processes.
Genetics 2007;175(4):1773-85.
2007: Fang Fang; Jing Ding; Vladimir N Minin; Marc A Suchard; Karin S Dorman
cBrother: relaxing parental tree assumptions for Bayesian recombination detection.
Bioinformatics (Oxford, England) 2007;23(4):507-8.
2007: Hua Guo; Robert E Weiss; Xun Gu; Marc A Suchard
Time squared: repeated measures on phylogenies.
Molecular biology and evolution 2007;24(2):352-62.
2007: Feng Su; Jennifer Lang; Ashutosh Kumar; Carey Ng; Brian Hsieh; Marc A Suchard; Srinivasa T Reddy; Robin Farias-Eisner
Validation of candidate serum ovarian cancer biomarkers for early detection.
Biomarker insights 2007;2():369-75.
2007: Brian Stevenson; Henry A Choy; Marija Pinne; Matthew L Rotondi; M Clarke Miller; Edward DeMoll; Peter Kraiczy; Anne E Cooley; Trevor Creamer; Marc A Suchard; Catherine A Brissette; Ashutosh Verma; David A Haake
Leptospira interrogans endostatin-like outer membrane proteins bind host fibronectin, laminin and regulators of complement.
PloS one 2007;2(11):e1188.
2007: Benjamin D Redelings; Marc A Suchard
Incorporating indel information into phylogeny estimation for rapidly emerging pathogens.
BMC evolutionary biology 2007;7():40.
2006: Christina Kitchen; Jing Lu; Marc A Suchard; Rebecca Hoh; Jeffrey N Martin; Daniel R Kuritzkes; Steven G Deeks
Continued evolution in gp41 after interruption of enfuvirtide in subjects with advanced HIV type 1 disease.
AIDS research and human retroviruses 2006;22(12):1260-6.
2006: Navindra P Seeram; Susanne M Henning; Yanjun Zhang; Marc A Suchard; Zhaoping Li; David Heber
Pomegranate juice ellagitannin metabolites are present in human plasma and some persist in urine for up to 48 hours.
The Journal of nutrition 2006;136(10):2481-5.
2006: Marc A Suchard; Benjamin D Redelings
BAli-Phy: simultaneous Bayesian inference of alignment and phylogeny.
Bioinformatics (Oxford, England) 2006;22(16):2047-8.
2006: Michael S Milane; Marc A Suchard; Ma-Li Wong; Julio Licinio
Modeling of the temporal patterns of fluoxetine prescriptions and suicide rates in the United States.
PLoS medicine 2006;3(6):e190.
2006: Joseph C Liao; Mitra Mastali; Vincent Gau; Marc A Suchard; Annette K Møller; David A Bruckner; Jane T Babbitt; Yang Li; Jeffrey Gornbein; Elliot M Landaw; Edward R B McCabe; Bernard M Churchill; David A Haake
Use of electrochemical DNA biosensors for rapid molecular identification of uropathogens in clinical urine specimens.
Journal of clinical microbiology 2006;44(2):561-70.
2005: Marc A Suchard; Robert E Weiss; Janet S Sinsheimer
Models for estimating bayes factors with applications to phylogeny and tests of monophyly.
Biometrics 2005;61(3):665-73.
2005: Vladimir N Minin; Karin S Dorman; Fang Fang; Marc A Suchard
Dual multiple change-point model leads to more accurate recombination detection.
Bioinformatics (Oxford, England) 2005;21(13):3034-42.
2005: Benjamin D Redelings; Marc A Suchard
Joint Bayesian estimation of alignment and phylogeny.
Systematic biology 2005;54(3):401-18.
2005: Marc A Suchard
Stochastic models for horizontal gene transfer: taking a random walk through tree space.
Genetics 2005;170(1):419-31.
2004: Roy Vongtama; Michelle Lee; Brian Kim; Joel A Sercarz; Kevin Lin; Marc A Suchard; Steve P Lee; Guy Juillard
Early nodal response as a predictor for necessity of functional neck dissection after chemoradiation.
Cancer journal (Sudbury, Mass.) 2004;10(6):339-42.
2004: Christina Kitchen; Sean Philpott; Harold Burger; Barbara Weiser; Kathryn Anastos; Marc A Suchard
Evolution of human immunodeficiency virus type 1 coreceptor usage during antiretroviral Therapy: a Bayesian approach.
Journal of virology 2004;78(20):11296-302.
2004: Jeffrey R Suchard; Marc A Suchard; Jennifer L Steinfeldt
Physician knowledge of herbal toxicities and adverse herb-drug interactions.
European journal of emergency medicine : official journal of the European Society for Emergency Medicine 2004;11(4):193-7.
2004: Bulent O Yildiz; Marc A Suchard; Ma-Li Wong; Samuel M McCann; Julio Licinio
Alterations in the dynamics of circulating ghrelin, adiponectin, and leptin in human obesity.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(28):10434-9.
2004: David A Haake; Marc A Suchard; Melissa M Kelley; Manjula Dundoo; David P Alt; Richard L Zuerner
Molecular evolution and mosaicism of leptospiral outer membrane proteins involves horizontal DNA transfer.
Journal of bacteriology 2004;186(9):2818-28.
2003: Marc A Suchard; Christina Kitchen; Janet S Sinsheimer; Robert E Weiss
Hierarchical phylogenetic models for analyzing multipartite sequence data.
Systematic biology 2003;52(5):649-64.
2003: Maria R D'Orsogna; Marc A Suchard; Tom Chou
Interplay of chemotaxis and chemokinesis mechanisms in bacterial dynamics.
Physical review. E, Statistical, nonlinear, and soft matter physics 2003;68(2 Pt 1):021925.
2003: Marc A Suchard; Robert E Weiss; Janet S Sinsheimer
Testing a molecular clock without an outgroup: derivations of induced priors on branch-length restrictions in a Bayesian framework.
Systematic biology 2003;52(1):48-54.
2003: Janet S Sinsheimer; Marc A Suchard; Karin S Dorman; Fang Fang; Robert E Weiss
Are you my mother? Bayesian phylogenetic inference of recombination among putative parental strains.
Applied bioinformatics 2003;2(3):131-44.
2002: Marc A Suchard; Robert E Weiss; Karin S Dorman; Janet S Sinsheimer
Oh brother, where art thou? A Bayes factor test for recombination with uncertain heritage.
Systematic biology 2002;51(5):715-28.
2002: Jean L Chan; Susann Blüher; Nikos Yiannakouris; Marc A Suchard; Jürgen Kratzsch; Christos S Mantzoros
Regulation of circulating soluble leptin receptor levels by gender, adiposity, sex steroids, and leptin: observational and interventional studies in humans.
Diabetes 2002;51(7):2105-12.
2001: Marc A Suchard; Robert E Weiss; Janet S Sinsheimer
Bayesian selection of continuous-time Markov chain evolutionary models.
Molecular biology and evolution 2001;18(6):1001-13.
2001: Marc A Suchard; Julia N Bailey; David Elashoff; Janet S Sinsheimer
SNPing away at candidate genes.
Genetic epidemiology 2001;21 Suppl 1():S643-8.
2000: J Chitnavis; Janet S Sinsheimer; Marc A Suchard; Kim Clipsham; Andrew Carr
End-stage coxarthrosis and gonarthrosis. Aetiology, clinical patterns and radiological features of idiopathic osteoarthritis.
Rheumatology (Oxford, England) 2000;39(6):612-9.
1999: Marc A Suchard; Patricia Yudkin; J S Sinsheimer; G H Fowler
General practitioners' views on genetic screening for common diseases.
The British journal of general practice : the journal of the Royal College of General Practitioners 1999;49(438):45-6.
1999: Julia N Bailey; Marc A Suchard; Susan L Smalley; Janet S Sinsheimer
Search for a gene x environment interaction: G x E hunt.
Genetic epidemiology 1999;17 Suppl 1():S491-6.