FIND

researchers

DISCOVER

relevant articles

PROMOTE

your research

now for free

Xiao Sun

Research Profile

Concepts & Ideas

Chemicals & Drugs

Activities & Behaviors

Physiology

Pattern Recognition, Automated

Genes & Molecular Sequences

Co-author Network

Publications

TOP 3
Yumin Nie; Hongde Liu; Xiao Sun
The patterns of histone modifications in the vicinity of transcription factor binding sites in human lymphoblastoid cell lines.
Xin Ma; Jing Guo; Hong-De Liu; Jian-Ming Xie; Xiao Sun
Sequence-based prediction of DNA-binding residues in proteins with conservation and correlation information.
Huan Huang; Hongde Liu; Shuangxin Yu; Xiao Sun
Nucleosome organization in sequences of alternative events in human genome.

Register for free to view:

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the research activity
of experts around the globe

Geonetwork of Xiao Sun (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

All Publications

2013: Yumin Nie; Hongde Liu; Xiao Sun
The patterns of histone modifications in the vicinity of transcription factor binding sites in human lymphoblastoid cell lines.
PloS one 2013;8(3):e60002.
2012: Xin Ma; Jing Guo; Hong-De Liu; Jian-Ming Xie; Xiao Sun
Sequence-based prediction of DNA-binding residues in proteins with conservation and correlation information.
IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM 2012;9(6):1766-75.
2012: Huan Huang; Hongde Liu; Shuangxin Yu; Xiao Sun
Nucleosome organization in sequences of alternative events in human genome.
Bio Systems 2012;109(2):214-9.
2012: Lejun Gong; Hongde Liu; Jianming Xie; Yunyang Yan; Xiao Sun
Prediction of autism susceptibility genes based on association rules.
Journal of neuroscience research 2012;90(6):1119-25.
2011: Jia-Feng Yu; Jing Guo; Dong-Ke Jiang; Ji-Hua Wang; Ke Xiao; Xiao Sun
An integrative method for identifying the over-annotated protein-coding genes in microbial genomes.
DNA research : an international journal for rapid publication of reports on genes and genomes 2011;18(6):435-49.
2011: Hongde Liu; Zongwei Cai; Shuhai Lin; Xiao Sun
Role of 10-11bp periodicities of eukaryotic DNA sequence in nucleosome positioning.
Bio Systems 2011;105(3):295-9.
2011: Xin Ma; Jing Guo; Jiansheng Wu; Hongde Liu; Jiafeng Yu; Jianming Xie; Xiao Sun
Prediction of RNA-binding residues in proteins from primary sequence using an enriched random forest model with a novel hybrid feature.
Proteins 2011;79(4):1230-9.
2011: Zhidong Yuan; Xiao Sun; Hongde Liu; Jianming Xie
MicroRNA genes derived from repetitive elements and expanded by segmental duplication events in mammalian genomes.
PloS one 2011;6(3):e17666.
2011: Hongde Liu; Xueye Duan; Shuangxin Yu; Xiao Sun
Analysis of nucleosome positioning determined by DNA helix curvature in the human genome.
BMC genomics 2011;12():72.
2010: Chao Tang; Xiaolong Shi; Wei Wang; Dequan Zhou; Jing Tu; Xueying Xie; Qinyu Ge; Peng Feng Xiao; Xiao Sun; Zuhong Lu
Global analysis of in vivo EGR1-binding sites in erythroleukemia cell using chromatin immunoprecipitation and massively parallel sequencing.
Electrophoresis 2010;31(17):2936-43.
2010: Jia-Feng Yu; Xiao Sun
Reannotation of protein-coding genes based on an improved graphical representation of DNA sequence.
Journal of computational chemistry 2010;31(11):2126-35.
2010: Zhidong Yuan; Xiao Sun; Dongke Jiang; Yan Ding; Zhiyuan Lu; Lejun Gong; Hongde Liu; Jianming Xie
Origin and evolution of a placental-specific microRNA family in the human genome.
BMC evolutionary biology 2010;10():346.
2010: Xinan Yang; Xiao Sun
Meta-analysis of cancer gene-profiling data.
Methods in molecular biology (Clifton, N.J.) 2010;576():409-26.
2009: Zixiang Xu; Xiao Sun; Shihai Yu
Genome-scale analysis to the impact of gene deletion on the metabolism of E. coli: constraint-based simulation approach.
BMC bioinformatics 2009;10 Suppl 1():S62.
2008: Hongde Liu; Jiansheng Wu; Jianming Xie; Xi'nan Yang; Zuhong Lu; Xiao Sun
Characteristics of nucleosome core DNA and their applications in predicting nucleosome positions.
Biophysical journal 2008;94(12):4597-604.
2008: Zhihua Liu; Jihong Meng; Xiao Sun
A novel feature-based method for whole genome phylogenetic analysis without alignment: application to HEV genotyping and subtyping.
Biochemical and biophysical research communications 2008;368(2):223-30.
2008: Zhi-Hua Liu; Xiao Sun
Coronavirus phylogeny based on base-base correlation.
International journal of bioinformatics research and applications 2008;4(2):211-20.
2007: Peng Jiang; Haonan Wu; Yao Da; Fei Sang; Jiawei Wei; Xiao Sun; Zuhong Lu
RFRCDB-siRNA: improved design of siRNAs by random forest regression model coupled with database searching.
Computer methods and programs in biomedicine 2007;87(3):230-8.
2007: Peng Jiang; Haonan Wu; Wenkai Wang; Wei Ma; Xiao Sun; Zuhong Lu
MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features.
Nucleic acids research 2007;35(Web Server issue):W339-44.
2007: Peng Jiang; Haonan Wu; Jiawei Wei; Fei Sang; Xiao Sun; Zuhong Lu
RF-DYMHC: detecting the yeast meiotic recombination hotspots and coldspots by random forest model using gapped dinucleotide composition features.
Nucleic acids research 2007;35(Web Server issue):W47-51.
2007: Peng Jiang; Xiao Sun; Zuhong Lu
Analysis of synonymous codon usage in Aeropyrum pernix K1 and other Crenarchaeota microorganisms.
Journal of genetics and genomics = Yi chuan xue bao 2007;34(3):275-84.
2007: Liang Chen; Yi Tao; Jianming Xie; Xiao Sun
[Construction and application of learning science related phenotype ontology].
Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi 2007;24(1):145-8.
2007: Xinan Yang; Xiao Sun
Meta-analysis of several gene lists for distinct types of cancer: a simple way to reveal common prognostic markers.
BMC bioinformatics 2007;8():118.
2006: Tong Zhou; Xiao Sun; Zuhong Lu
Synonymous codon usage in environmental chlamydia UWE25 reflects an evolutional divergence from pathogenic chlamydiae.
Gene 2006;368():117-25.
2006: Tong Zhou; Jianhong Weng; Xiao Sun; Zuhong Lu
Support vector machine for classification of meiotic recombination hotspots and coldspots in Saccharomyces cerevisiae based on codon composition.
BMC bioinformatics 2006;7():223.
2005: Zhi Hua Liu; Dian Jiao; Xiao Sun
Classifying genomic sequences by sequence feature analysis.
Genomics, proteomics & bioinformatics 2005;3(4):201-5.
2005: Yuanyuan Hu; Xiao Sun; Nongyue He; Jianxin Tang
[A gene-chip image grid localization method based on profiles of image].
Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi 2005;22(4):668-71.
2005: Tong Zhou; Wanjun Gu; Jianmin Ma; Xiao Sun; Zuhong Lu
Analysis of synonymous codon usage in H5N1 virus and other influenza A viruses.
Bio Systems 2005;81(1):77-86.
2005: Shixin Zhou; Yuqin Liu; Jianhong Weng; Linhua Kong; Xiao Sun; Bei Gu; Zuhong Lu
Expression profiles of mouse dendritic cell sarcoma are similar to those of hematopoietic stem cells or progenitors by clustering and principal component analyses.
Biochemical and biophysical research communications 2005;331(1):194-202.
2004: Shi-Xin Zhou; Xiao Sun; Zu-Hong Lu
[The progress in complex homeobox domains].
Yi chuan = Hereditas / Zhongguo yi chuan xue hui bian ji 2004;26(6):984-90.
2004: Wanjun Gu; Tong Zhou; Jianmin Ma; Xiao Sun; Zuhong Lu
Analysis of synonymous codon usage in SARS Coronavirus and other viruses in the Nidovirales.
Virus research 2004;101(2):155-61.
2004: Wanjun Gu; Tong Zhou; Jianmin Ma; Xiao Sun; Zuhong Lu
The relationship between synonymous codon usage and protein structure in Escherichia coli and Homo sapiens.
Bio Systems 2004;73(2):89-97.
2003: Wanjun Gu; Tong Zhou; Jianmin Ma; Xiao Sun; Zuhong Lu
Folding type specific secondary structure propensities of synonymous codons.
IEEE transactions on nanobioscience 2003;2(3):150-7.
2002: Jianmin Ma; Tong Zhou; Wanjun Gu; Xiao Sun; Zuhong Lu
Cluster analysis of the codon use frequency of MHC genes from different species.
Bio Systems 2002;65(2-3):199-207.