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Zucai Suo

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Sulfolobus solfataricus

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Publications

TOP 3
Brian A Maxwell; Zucai Suo
Single-molecule Investigation of Substrate Binding Kinetics and Protein Conformational Dynamics of a B-family Replicative DNA Polymerase.
David J Taggart; John-Stephen Taylor; Terry L Camerlengo; Jason K Harrison; Kun Huang; Ajay K Kshetry; Shanen M Sherrer; Zucai Suo
A high-throughput and quantitative method to assess the mutagenic potential of translesion DNA synthesis.
A Yasemin Göksenin; Kimberly G LeCompte; Zucai Suo; David J Taggart; Walter Zahurancik; Zachary F Pursell
Human DNA polymerase ε is able to efficiently extend from multiple consecutive ribonucleotides.

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All Publications

2013: Brian A Maxwell; Zucai Suo
Single-molecule Investigation of Substrate Binding Kinetics and Protein Conformational Dynamics of a B-family Replicative DNA Polymerase.
The Journal of biological chemistry 2013;288(16):11590-600.
2013: David J Taggart; John-Stephen Taylor; Terry L Camerlengo; Jason K Harrison; Kun Huang; Ajay K Kshetry; Shanen M Sherrer; Zucai Suo
A high-throughput and quantitative method to assess the mutagenic potential of translesion DNA synthesis.
Nucleic acids research 2013;41(8):e96.
2012: A Yasemin Göksenin; Kimberly G LeCompte; Zucai Suo; David J Taggart; Walter Zahurancik; Zachary F Pursell
Human DNA polymerase ε is able to efficiently extend from multiple consecutive ribonucleotides.
The Journal of biological chemistry 2012;287(51):42675-84.
2012: Shanen M Sherrer; Ashis K Basu; Chanchal K Malik; Lindsey R Pack; David J Taggart; Zucai Suo
Quantitative analysis of the mutagenic potential of 1-aminopyrene-DNA adduct bypass catalyzed by Y-family DNA polymerases.
Mutation research 2012;737(1-2):25-33.
2012: Yong Wang; Xiakun Chu; Zucai Suo; Erkang Wang; Jin Wang
Multidomain protein solves the folding problem by multifunnel combined landscape: theoretical investigation of a Y-family DNA polymerase.
Journal of the American Chemical Society 2012;134(33):13755-64.
2012: Shanen M Sherrer; Jun Zhang; Kevin A. Fiala; Jason D Fowler; Brian A Maxwell; Lindsey R Pack; Zucai Suo
Identification of an unfolding intermediate for a DNA lesion bypass polymerase.
Chemical research in toxicology 2012;25(7):1531-40.
2012: A S Prakasha Gowda; Gowdahalli Krishnegowda; Shantu Amin; Zucai Suo; Thomas E Spratt
Low fidelity bypass of O(2)-(3-pyridyl)-4-oxobutylthymine, the most persistent bulky adduct produced by the tobacco specific nitrosamine 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone by model DNA polymerases.
Chemical research in toxicology 2012;25(6):1195-202.
2012: Brian A Maxwell; Zucai Suo
Kinetic basis for the differing response to an oxidative lesion by a replicative and a lesion bypass DNA polymerase from Sulfolobus solfataricus.
Biochemistry 2012;51(16):3485-96.
2012: Brian A Maxwell; Cuiling Xu; Zucai Suo
DNA lesion alters global conformational dynamics of Y-family DNA polymerase during catalysis.
The Journal of biological chemistry 2012;287(16):13040-7.
2012: Shanen M Sherrer; Cynthia X Xia; Ashis K Basu; Eric R Bolin; Georgia Efthimiopoulos; Chanchal K Malik; Laura E Sanman; Zucai Suo
Kinetic analysis of the bypass of a bulky DNA lesion catalyzed by human Y-family DNA polymerases.
Chemical research in toxicology 2012;25(3):730-40.
2012: Qian Song; Zucai Suo; Shanen M Sherrer; John-Stephen Taylor
Preparation of site-specific T=mCG cis-syn cyclobutane dimer-containing template and its error-free bypass by yeast and human polymerase η.
The Journal of biological chemistry 2012;287(11):8021-8.
2012: Jessica A Brown; Jason D Fowler; Lindsey R Pack; Zucai Suo
Presteady state kinetic investigation of the incorporation of anti-hepatitis B nucleotide analogues catalyzed by noncanonical human DNA polymerases.
Chemical research in toxicology 2012;25(1):225-33.
2011: Dejian Ma; Jason D Fowler; Zucai Suo
Backbone assignment of the little finger domain of a Y-family DNA polymerase.
Biomolecular NMR assignments 2011;5(2):195-8.
2011: Kevin N Kirouac; Zucai Suo; Hong Ling
Structural mechanism of ribonucleotide discrimination by a Y-family DNA polymerase.
Journal of molecular biology 2011;407(3):382-90.
2011: Jessica A Brown; Zucai Suo
Unlocking the sugar "steric gate" of DNA polymerases.
Biochemistry 2011;50(7):1135-42.
2011: Jessica A Brown; Lindsey R Pack; Laura E Sanman; Zucai Suo
Efficiency and fidelity of human DNA polymerases λ and β during gap-filling DNA synthesis.
DNA repair 2011;10(1):24-33.
2011: Jessica A Brown; Lindsey R Pack; Jason D Fowler; Zucai Suo
Pre-steady-state kinetic analysis of the incorporation of anti-HIV nucleotide analogs catalyzed by human X- and Y-family DNA polymerases.
Antimicrobial agents and chemotherapy 2011;55(1):276-83.
2011: Shanen M Sherrer; Kevin A. Fiala; Jason D Fowler; Sean A Newmister; John M Pryor; Zucai Suo
Quantitative analysis of the efficiency and mutagenic spectra of abasic lesion bypass catalyzed by human Y-family DNA polymerases.
Nucleic acids research 2011;39(2):609-22.
2010: Shanen M Sherrer; David C Beyer; Cynthia X Xia; Jason D Fowler; Zucai Suo
Kinetic basis of sugar selection by a Y-family DNA polymerase from Sulfolobus solfataricus P2.
Biochemistry 2010;49(47):10179-86.
2010: Jessica A Brown; Lindsey R Pack; Shanen M Sherrer; Ajay K Kshetry; Sean A Newmister; Jason D Fowler; John-Stephen Taylor; Zucai Suo
Identification of critical residues for the tight binding of both correct and incorrect nucleotides to human DNA polymerase λ.
Journal of molecular biology 2010;403(4):505-15.
2010: Dejian Ma; Jason D Fowler; Chunhua Yuan; Zucai Suo
Backbone assignment of the catalytic core of a Y-family DNA polymerase.
Biomolecular NMR assignments 2010;4(2):207-9.
2010: Jessica A Brown; Jason D Fowler; Zucai Suo
Kinetic basis of nucleotide selection employed by a protein template-dependent DNA polymerase.
Biochemistry 2010;49(26):5504-10.
2010: Jimson H Y Wong; Jessica A Brown; Zucai Suo; Paul Blum; Takehiko Nohmi; Hong Ling
Structural insight into dynamic bypass of the major cisplatin-DNA adduct by Y-family polymerase Dpo4.
The EMBO journal 2010;29(12):2059-69.
2010: Jessica A Brown; Kevin A. Fiala; Jason D Fowler; Shanen M Sherrer; Sean A Newmister; Wade W Duym; Zucai Suo
A novel mechanism of sugar selection utilized by a human X-family DNA polymerase.
Journal of molecular biology 2010;395(2):282-90.
2010: Jessica A Brown; Likui Zhang; Shanen M Sherrer; John-Stephen Taylor; Peter M J Burgers; Zucai Suo
Pre-Steady-State Kinetic Analysis of Truncated and Full-Length Saccharomyces cerevisiae DNA Polymerase Eta.
Journal of nucleic acids 2010;2010():.
2009: Cuiling Xu; Brian A Maxwell; Jessica A Brown; Likui Zhang; Zucai Suo
Global conformational dynamics of a Y-family DNA polymerase during catalysis.
PLoS biology 2009;7(10):e1000225.
2009: Jessica A Brown; Zucai Suo
Elucidating the kinetic mechanism of DNA polymerization catalyzed by Sulfolobus solfataricus P2 DNA polymerase B1.
Biochemistry 2009;48(31):7502-11.
2009: Likui Zhang; Jessica A Brown; Sean A Newmister; Zucai Suo
Polymerization fidelity of a replicative DNA polymerase from the hyperthermophilic archaeon Sulfolobus solfataricus P2.
Biochemistry 2009;48(31):7492-501.
2009: Jason D Fowler; Jessica A Brown; Mamuka Kvaratskhelia; Zucai Suo
Probing conformational changes of human DNA polymerase lambda using mass spectrometry-based protein footprinting.
Journal of molecular biology 2009;390(3):368-79.
2009: Shanen M Sherrer; Jessica A Brown; Lindsey R Pack; Vijay P Jasti; Jason D Fowler; Ashis K Basu; Zucai Suo
Mechanistic studies of the bypass of a bulky single-base lesion catalyzed by a Y-family DNA polymerase.
The Journal of biological chemistry 2009;284(10):6379-88.
2008: Lindsey DeCarlo; A S Prakasha Gowda; Zucai Suo; Thomas E Spratt
Formation of purine-purine mispairs by Sulfolobus solfataricus DNA polymerase IV.
Biochemistry 2008;47(31):8157-64.
2008: Jessica A Brown; Sean A Newmister; Kevin A. Fiala; Zucai Suo
Mechanism of double-base lesion bypass catalyzed by a Y-family DNA polymerase.
Nucleic acids research 2008;36(12):3867-78.
2008: Jimson H Wong; Kevin A. Fiala; Zucai Suo; Hong Ling
Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4.
Journal of molecular biology 2008;379(2):317-30.
2008: Jason D Fowler; Jessica A Brown; Kenneth A Johnson; Zucai Suo
Kinetic investigation of the inhibitory effect of gemcitabine on DNA polymerization catalyzed by human mitochondrial DNA polymerase.
The Journal of biological chemistry 2008;283(22):15339-48.
2008: Kevin A. Fiala; Shanen M Sherrer; Jessica A Brown; Zucai Suo
Mechanistic consequences of temperature on DNA polymerization catalyzed by a Y-family DNA polymerase.
Nucleic acids research 2008;36(6):1990-2001.
2007: Jessica A Brown; Wade W Duym; Jason D Fowler; Zucai Suo
Single-turnover kinetic analysis of the mutagenic potential of 8-oxo-7,8-dihydro-2'-deoxyguanosine during gap-filling synthesis catalyzed by human DNA polymerases lambda and beta.
Journal of molecular biology 2007;367(5):1258-69.
2007: Kevin A. Fiala; Zucai Suo
Sloppy bypass of an abasic lesion catalyzed by a Y-family DNA polymerase.
The Journal of biological chemistry 2007;282(11):8199-206.
2007: Kevin A. Fiala; Cameron D Hypes; Zucai Suo
Mechanism of abasic lesion bypass catalyzed by a Y-family DNA polymerase.
The Journal of biological chemistry 2007;282(11):8188-98.
2007: Zucai Suo; Mohd Amir F Abdullah
Unique composite active site of the hepatitis C virus NS2-3 protease: a new opportunity for antiviral drug design.
ChemMedChem 2007;2(3):283-4.
2007: Kevin A. Fiala; Jessica A Brown; Hong Ling; Ajay K Kshetry; Jun Zhang; John-Stephen Taylor; WEI YANG; Zucai Suo
Mechanism of template-independent nucleotide incorporation catalyzed by a template-dependent DNA polymerase.
Journal of molecular biology 2007;365(3):590-602.
2006: Wade W Duym; Kevin A. Fiala; Nikunj Bhatt; Zucai Suo
Kinetic effect of a downstream strand and its 5'-terminal moieties on single nucleotide gap-filling synthesis catalyzed by human DNA polymerase lambda.
The Journal of biological chemistry 2006;281(47):35649-55.
2006: Kevin A. Fiala; Wade W Duym; Jun Zhang; Zucai Suo
Up-regulation of the fidelity of human DNA polymerase lambda by its non-enzymatic proline-rich domain.
The Journal of biological chemistry 2006;281(28):19038-44.
2006: Jason D Fowler; Zucai Suo
Biochemical, structural, and physiological characterization of terminal deoxynucleotidyl transferase.
Chemical reviews 2006;106(6):2092-110.
2005: Zucai Suo
Thioesterase portability and peptidyl carrier protein swapping in yersiniabactin synthetase from Yersinia pestis.
Biochemistry 2005;44(12):4926-38.
2004: Michelle P Roettger; Kevin A. Fiala; Susmitha Sompalli; Yuxia Dong; Zucai Suo
Pre-steady-state kinetic studies of the fidelity of human DNA polymerase mu.
Biochemistry 2004;43(43):13827-38.
2004: Kevin A. Fiala; Wissam Abdel-Gawad; Zucai Suo
Pre-steady-state kinetic studies of the fidelity and mechanism of polymerization catalyzed by truncated human DNA polymerase lambda.
Biochemistry 2004;43(21):6751-62.
2004: Kevin A. Fiala; Zucai Suo
Mechanism of DNA polymerization catalyzed by Sulfolobus solfataricus P2 DNA polymerase IV.
Biochemistry 2004;43(7):2116-25.
2004: Kevin A. Fiala; Zucai Suo
Pre-steady-state kinetic studies of the fidelity of Sulfolobus solfataricus P2 DNA polymerase IV.
Biochemistry 2004;43(7):2106-15.