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Yutaka Suzuki
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53
Sugano, Sumio
14
Nakai, Kenta
14
Yamashita, Riu
10
Wakaguri, Hiroyuki
8
Mizushima-Sugano, Junko
7
Isogai, Takao
7
Hashimoto, Katsuyuki
7
Osada, Naoki
6
Watanabe, Junichi
6
Ota, Toshio
5
Sakaki, Yoshiyuki
5
Sasaki, Masahide
5
Hida, Munetomo
5
Hirata, Makoto
4
Hashimoto, Shin-ichi
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Geonetwork of Yutaka Suzuki (preview)
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All Publications
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2009: Tsuchihara Katsuya; Suzuki Yutaka; Wakaguri Hiroyuki; Irie Takuma; Tanimoto Kousuke; Hashimoto Shin-ichi; Matsushima Kouji; Mizushima-Sugano Junko; Yamashita Riu; Nakai Kenta; Bentley David; Esumi Hiroyasu; Sugano Sumio
Massive transcriptional start site analysis of human genes in hypoxia cells.
Nucleic acids research 2009;37(7):2249-63.
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2009: Sierro Nicolas; Li Shuang; Suzuki Yutaka; Yamashita Riu; Nakai Kenta
Spatial and temporal preferences for trans-splicing in Ciona intestinalis revealed by EST-based gene expression analysis.
Gene 2009;430(1-2):44-9.
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2009: Osada Naoki; Hirata Makoto; Tanuma Reiko; Suzuki Yutaka; Sugano Sumio; Terao Keiji; Kusuda Jun; Kameoka Yosuke; Hashimoto Katsuyuki; Takahashi Ichiro
Collection of Macaca fascicularis cDNAs derived from bone marrow, kidney, liver, pancreas, spleen, and thymus.
BMC research notes 2009;2():199.
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2009: Wakaguri Hiroyuki; Suzuki Yutaka; Sasaki Masahide; Sugano Sumio; Watanabe Junichi
Inconsistencies of genome annotations in apicomplexan parasites revealed by 5'-end-one-pass and full-length sequences of oligo-capped cDNAs.
BMC genomics 2009;10():312.
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2009: Hashimoto Shin-ichi; Qu Wei; Ahsan Budrul; Ogoshi Katsumi; Sasaki Atsushi; Nakatani Yoichiro; Lee Yongjun; Ogawa Masako; Ametani Akio; Suzuki Yutaka; Sugano Sumio; Lee Clarence C; Nutter Robert C; Morishita Shinichi; Matsushima Kouji
High-resolution analysis of the 5'-end transcriptome using a next generation DNA sequencer.
PloS one 2009;4(1):e4108.
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2008: Yamashita Riu; Suzuki Yutaka; Takeuchi Nono; Wakaguri Hiroyuki; Ueda Takuya; Sugano Sumio; Nakai Kenta
Comprehensive detection of human terminal oligo-pyrimidine (TOP) genes and analysis of their characteristics.
Nucleic acids research 2008;36(11):3707-15.
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2008: Uno Yasuhiro; Suzuki Yutaka; Wakaguri Hiroyuki; Sakamoto Yoshiko; Sano Hitomi; Osada Naoki; Hashimoto Katsuyuki; Sugano Sumio; Inoue Ituro
Expressed sequence tags from cynomolgus monkey (Macaca fascicularis) liver: a systematic identification of drug-metabolizing enzymes.
FEBS letters 2008;582(2):351-8.
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2008: Wakaguri Hiroyuki; Yamashita Riu; Suzuki Yutaka; Sugano Sumio; Nakai Kenta
DBTSS: database of transcription start sites, progress report 2008.
Nucleic acids research 2008;36(Database issue):D97-101.
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2008: Osada Naoki; Hashimoto Katsuyuki; Kameoka Yosuke; Hirata Makoto; Tanuma Reiko; Uno Yasuhiro; Inoue Itsuro; Hida Munetomo; Suzuki Yutaka; Sugano Sumio; Terao Keiji; Kusuda Jun; Takahashi Ichiro
Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta.
BMC genomics 2008;9():90.
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2007: Okabe Takahiro; Ohmori Yoshihiro; Tanigami Akira; Hishigaki Haretsugu; Suzuki Yutaka; Sugano Sumio; Kawaguchi Amu; Nakaya Hiroyuki; Wakitani Shigeyuki
Detection of gene expression in synovium of patients with osteoarthritis using a random sequencing method.
Acta orthopaedica 2007;78(5):687-92.
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2007: Tsuritani Katsuki; Irie Takuma; Yamashita Riu; Sakakibara Yuta; Wakaguri Hiroyuki; Kanai Akinori; Mizushima-Sugano Junko; Sugano Sumio; Nakai Kenta; Suzuki Yutaka
Distinct class of putative "non-conserved" promoters in humans: comparative studies of alternative promoters of human and mouse genes.
Genome research 2007;17(7):1005-14.
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2007: Oyama Masaaki; Kozuka-Hata Hiroko; Suzuki Yutaka; Semba Kentaro; Yamamoto Tadashi; Sugano Sumio
Diversity of translation start sites may define increased complexity of the human short ORFeome.
Molecular & cellular proteomics : MCP 2007;6(6):1000-6.
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2007: Sakakibara Yuta; Irie Takuma; Suzuki Yutaka; Yamashita Riu; Wakaguri Hiroyuki; Kanai Akinori; Chiba Joe; Takagi Toshihisa; Mizushima-Sugano Junko; Hashimoto Shin-ichi; Nakai Kenta; Sugano Sumio
Intrinsic promoter activities of primary DNA sequences in the human genome.
DNA research : an international journal for rapid publication of reports on genes and genomes 2007;14(2):71-7.
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2007: Funaguma Shunsuke; Hashimoto Shin-ichi; Suzuki Yutaka; Omuro Naoko; Sugano Sumio; Mita Kazuei; Katsuma Susumu; Shimada Toru
SAGE analysis of early oogenesis in the silkworm, Bombyx mori.
Insect biochemistry and molecular biology 2007;37(2):147-54.
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2007: Watanabe Junichi; Wakaguri Hiroyuki; Sasaki Masahide; Suzuki Yutaka; Sugano Sumio
Comparasite: a database for comparative study of transcriptomes of parasites defined by full-length cDNAs.
Nucleic acids research 2007;35(Database issue):D431-8.
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2006: Cheong Jieun; Yamada Yoichi; Yamashita Riu; Irie Takuma; Kanai Akinori; Wakaguri Hiroyuki; Nakai Kenta; Ito Takashi; Saito Izumu; Sugano Sumio; Suzuki Yutaka
Diverse DNA methylation statuses at alternative promoters of human genes in various tissues.
DNA research : an international journal for rapid publication of reports on genes and genomes 2006;13(4):155-67.
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2006: Suzuki Yutaka; Sugano Sumio
Transcriptome analyses of human genes and applications for proteome analyses.
Current protein & peptide science 2006;7(2):147-63.
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2006: Yamashita Riu; Suzuki Yutaka; Wakaguri Hiroyuki; Tsuritani Katsuki; Nakai Kenta; Sugano Sumio
DBTSS: DataBase of Human Transcription Start Sites, progress report 2006.
Nucleic acids research 2006;34(Database issue):D86-9.
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2005: Osada Naoki; Hirata Makoto; Tanuma Reiko; Kusuda Jun; Hida Munetomo; Suzuki Yutaka; Sugano Sumio; Gojobori Takashi; Shen C-K James; Wu Chung-I; Hashimoto Katsuyuki
Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs.
Molecular biology and evolution 2005;22(10):1976-82.
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2005: Yamashita Riu; Suzuki Yutaka; Sugano Sumio; Nakai Kenta
Genome-wide analysis reveals strong correlation between CpG islands with nearby transcription start sites of genes and their tissue specificity.
Gene 2005;350(2):129-36.
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2005: Otsuki Tetsuji; Ota Toshio; Nishikawa Tetsuo; Hayashi Koji; Suzuki Yutaka; Yamamoto Jun-ichi; Wakamatsu Ai; Kimura Kouichi; Sakamoto Katsuhiko; Hatano Naoto; Kawai Yuri; Ishii Shizuko; Saito Kaoru; Kojima Shin-ichi; Sugiyama Tomoyasu; Ono Tetsuyoshi; Okano Kazunori; Yoshikawa Yoko; Aotsuka Satoshi; Sasaki Naokazu; Hattori Atsushi; Okumura Koji; Nagai Keiichi; Sugano Sumio; Isogai Takao
Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries.
DNA research : an international journal for rapid publication of reports on genes and genomes 2005;12(2):117-26.
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2004: Oyama Masaaki; Itagaki Chiharu; Hata Hiroko; Suzuki Yutaka; Izumi Tomonori; Natsume Tohru; Isobe Toshiaki; Sugano Sumio
Analysis of small human proteins reveals the translation of upstream open reading frames of mRNAs.
Genome research 2004;14(10B):2048-52.
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2004: Suzuki Yutaka; Yamashita Riu; Shirota Matsuyuki; Sakakibara Yuta; Chiba Joe; Mizushima-Sugano Junko; Nakai Kenta; Sugano Sumio
Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions.
Genome research 2004;14(9):1711-8.
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2004: Watanabe Junichi; Suzuki Yutaka; Sasaki Masahide; Sugano Sumio
Full-malaria 2004: an enlarged database for comparative studies of full-length cDNAs of malaria parasites, Plasmodium species.
Nucleic acids research 2004;32(Database issue):D334-8.
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2004: Suzuki Yutaka; Yamashita Riu; Sugano Sumio; Nakai Kenta
DBTSS, DataBase of Transcriptional Start Sites: progress report 2004.
Nucleic acids research 2004;32(Database issue):D78-81.
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2004: Suzuki Yutaka; Yamashita Riu; Shirota Matsuyuki; Sakakibara Yuta; Chiba Joe; Mizushima-Sugano Junko; Kel Alexander E; Arakawa Takahiro; Carninci Piero; Kawai Jun; Hayashizaki Yoshihide; Takagi Toshihisa; Nakai Kenta; Sugano Sumio
Large-scale collection and characterization of promoters of human and mouse genes.
In silico biology 2004;4(4):429-44.
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2003: Yamashita Riu; Suzuki Yutaka; Nakai Kenta; Sugano Sumio
Small open reading frames in 5' untranslated regions of mRnas.
Comptes rendus biologies 2003;326(10-11):987-91.
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2003: Shibui-Nihei Akiko; Ohmori Yoshihiro; Yoshida Kenichi; Imai Jun-ichi; Oosuga Ikurou; Iidaka Makoto; Suzuki Yutaka; Mizushima-Sugano Junko; Yoshitomo-Nakagawa Kiyomi; Sugano Sumio
The 5' terminal oligopyrimidine tract of human elongation factor 1A-1 gene functions as a transcriptional initiator and produces a variable number of Us at the transcriptional level.
Gene 2003;311():137-45.
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2003: Suzuki Yutaka; Sugano Sumio
Construction of a full-length enriched and a 5'-end enriched cDNA library using the oligo-capping method.
Methods in molecular biology (Clifton, N.J.) 2003;221():73-91.
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2002: Komatsu Takami; Suzuki Yutaka; Imai Junichi; Sugano Sumio; Hida Munetomo; Tanigami Akira; Muroi Sawako; Yamada Yoshitsugu; Hanaoka Kazuo
Molecular cloning, mRNA expression and chromosomal localization of mouse angiotensin-converting enzyme-related carboxypeptidase (mACE2).
DNA sequence : the journal of DNA sequencing and mapping 2002;13(4):217-20.
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2002: Takamatsu Kunihiko; Maekawa Kohei; Togashi Takushi; Choi Dong-Kug; Suzuki Yutaka; Taylor Todd D; Toyoda Atsushi; Sugano Sumio; Fujiyama Asao; Hattori Masahira; Sakaki Yoshiyuki; Takeda Tadayuki
Identification of two novel primate-specific genes in DSCR.
DNA research : an international journal for rapid publication of reports on genes and genomes 2002;9(3):89-97.
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2002: Watanabe Junichi; Sasaki Masahide; Suzuki Yutaka; Sugano Sumio
Analysis of transcriptomes of human malaria parasite Plasmodium falciparum using full-length enriched library: identification of novel genes and diverse transcription start sites of messenger RNAs.
Gene 2002;291(1-2):105-13.
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2002: Omori Yoshihiro; Imai Jun-ichi; Suzuki Yutaka; Watanabe Shinya; Tanigami Akira; Sugano Sumio
OASIS is a transcriptional activator of CREB/ATF family with a transmembrane domain.
Biochemical and biophysical research communications 2002;293(1):470-7.
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2002: Suzuki Yutaka; Yamashita Riu; Nakai Kenta; Sugano Sumio
DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs.
Nucleic acids research 2002;30(1):328-31.
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2002: Nishikawa Tetsuo; Ota Toshio; Kawai Yuri; Ishii Shizuko; Saito Kaoru; Yamamoto Jun-ichi; Wakamatsu Ai; Ozawa Masashi; Suzuki Yutaka; Sugano Sumio; Isogai Takao
Database and analysis system for cDNA clones obtained from full-length enriched cDNA libraries.
In silico biology 2002;2(1):5-18.
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2002: Osada Naoki; Hida Munetomo; Kusuda Jun; Tanuma Reiko; Hirata Makoto; Hirai Momoki; Terao Keiji; Suzuki Yutaka; Sugano Sumio; Hashimoto Katsuyuki
Prediction of unidentified human genes on the basis of sequence similarity to novel cDNAs from cynomolgus monkey brain.
Genome biology 2002;3(1):RESEARCH0006.
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2001: Osada N; Hida M; Kusuda J; Tanuma R; Iseki K; Hirata M; Suto Y; Hirai M; Terao K; Suzuki Y; Sugano S; Hashimoto K;
Assignment of 118 novel cDNAs of cynomolgus monkey brain to human chromosomes.
Gene 2001;275(1):31-7.
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2001: Suzuki Y; Taira H; Tsunoda T; Mizushima-Sugano J; Sese J; Hata H; Ota T; Isogai T; Tanaka T; Morishita S; Okubo K; Sakaki Y; Nakamura Y; Suyama A; Sugano S
Diverse transcriptional initiation revealed by fine, large-scale mapping of mRNA start sites.
EMBO reports 2001;2(5):388-93.
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2001: Omori Y; Imai J; Watanabe M; Komatsu T; Suzuki Y; Kataoka K; Watanabe S; Tanigami A; Sugano S
CREB-H: a novel mammalian transcription factor belonging to the CREB/ATF family and functioning via the box-B element with a liver-specific expression.
Nucleic acids research 2001;29(10):2154-62.
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2001: Suzuki Y; Tsunoda T; Sese J; Taira H; Mizushima-Sugano J; Hata H; Ota T; Isogai T; Tanaka T; Nakamura Y; Suyama A; Sakaki Y; Morishita S; Okubo K; Sugano S
Identification and characterization of the potential promoter regions of 1031 kinds of human genes.
Genome research 2001;11(5):677-84.
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2001: Choi D K; Suzuki Y; Yoshimura S; Togashi T; Hida M; Taylor T D; Wang Y; Sugano S; Hattori M; Sakaki Y
Molecular cloning and characterization of a gene expressed in mouse developing tongue, mDscr5 gene, a homolog of human DSCR5 (Down syndrome Critical Region gene 5).
Mammalian genome : official journal of the International Mammalian Genome Society 2001;12(5):347-51.
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2001: Shibui A; Ohmori Y; Suzuki Y; Sasaki M; Nogami S; Sugano S; Watanabe J
Effects of DNA vaccine in murine malaria using a full-length cDNA library.
Research communications in molecular pathology and pharmacology 2001;109(3-4):147-57.
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2001: Yudate H T; Suwa M; Irie R; Matsui H; Nishikawa T; Nakamura Y; Yamaguchi D; Peng Z Z; Yamamoto T; Nagai K; Hayashi K; Otsuki T; Sugiyama T; Ota T; Suzuki Y; Sugano S; Isogai T; Masuho Y
HUNT: launch of a full-length cDNA database from the Helix Research Institute.
Nucleic acids research 2001;29(1):185-8.
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2001: Watanabe J; Sasaki M; Suzuki Y; Sugano S
FULL-malaria: a database for a full-length enriched cDNA library from human malaria parasite, Plasmodium falciparum.
Nucleic acids research 2001;29(1):70-1.
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2001: Suzuki Y; Sugano S
Construction of full-length-enriched cDNA libraries. The oligo-capping method.
Methods in molecular biology (Clifton, N.J.) 2001;175():143-53.
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2000: Suzuki Y
Detection of the swings of the lever arm of a myosin motor by fluorescence resonance energy transfer of green and blue fluorescent proteins.
Methods (San Diego, Calif.) 2000;22(4):355-63.
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2000: Yasunaga T; Suzuki Y; Ohkura R; Sutoh K; Wakabayashi T
ATP-induced transconformation of myosin revealed by determining three-dimensional positions of fluorophores from fluorescence energy transfer measurements.
Journal of structural biology 2000;132(1):6-18.
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2000: Takasaki J; Kamohara M; Matsumoto M; Saito T; Sugimoto T; Ohishi T; Ishii H; Ota T; Nishikawa T; Kawai Y; Masuho Y; Isogai T; Suzuki Y; Sugano S; Furuichi K
The molecular characterization and tissue distribution of the human cysteinyl leukotriene CysLT(2) receptor.
Biochemical and biophysical research communications 2000;274(2):316-22.
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2000: Togashi T; Choi D K; Taylor T D; Suzuki Y; Sugano S; Hattori M; Sakaki Y
A novel gene, DSCR5, from the distal Down syndrome critical region on chromosome 21q22.2.
DNA research : an international journal for rapid publication of reports on genes and genomes 2000;7(3):207-12.
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2000: Suzuki Y; Ishihara D; Sasaki M; Nakagawa H; Hata H; Tsunoda T; Watanabe M; Komatsu T; Ota T; Isogai T; Suyama A; Sugano S
Statistical analysis of the 5' untranslated region of human mRNA using "Oligo-Capped" cDNA libraries.
Genomics 2000;64(3):286-97.
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2000: Osada N; Kusuda J; Suzuki Y; Sugano S; Hashimoto K
Sequence analysis, gene expression, and chromosomal assignment of mouse Borg4 gene and its human orthologue.
Journal of human genetics 2000;45(6):374-7.
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1999: Shibui A; Tsunoda T; Seki N; Suzuki Y; Sugano S; Sugane K
Cloning, expression analysis, and chromosomal localization of a novel butyrophilin-like receptor.
Journal of human genetics 1999;44(4):249-52.
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1999: Shibui A; Tsunoda T; Seki N; Suzuki Y; Sugane K; Sugano S
Isolation and chromosomal mapping of a novel human gene showing homology to Na+/PO4 cotransporter.
Journal of human genetics 1999;44(3):190-2.
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1998: Suzuki Y; Yasunaga T; Ohkura R; Wakabayashi T; Sutoh K
Swing of the lever arm of a myosin motor at the isomerization and phosphate-release steps.
Nature 1998;396(6709):380-3.
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1997: Suzuki Y; Sugano S
[Generation of the 5' EST using 5'-end enriched cDNA library]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1997;42(17 Suppl):2836-43.
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1997: Suzuki Y; Yoshitomo-Nakagawa K; Maruyama K; Suyama A; Sugano S
Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library.
Gene 1997;200(1-2):149-56.
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1997: Suzuki Y; Ohkura R; Sugiura S; Yasuda R; Kinoshita K; Tanokura M; Sutoh K
Modulation of actin filament sliding by mutations of the SH2 cysteine in Dictyostelium myosin II.
Biochemical and biophysical research communications 1997;234(3):701-6.
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1996: Yu Y S; Suzuki Y; Yoshitomo K; Muramatsu M; Yamaguchi N; Sugano S
The promoter structure of TGF-beta type II receptor revealed by "oligo-capping" method and deletion analysis.
Biochemical and biophysical research communications 1996;225(1):302-6.
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