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Jeffrey Boore

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Evolution, Molecular

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Genomics

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TOP 3
Oleg Simakov; Astrid Y Terry; David A Weisblat; Robert Savage; Elaine C Seaver; Harris Shapiro; Andrea Aerts; Detlev Arendt; Jeffrey L Boore; Jarrod A Chapman; Sung-Jin Cho; Pieter de Jong; Eric Edsinger-Gonzales; Igor V Grigoriev; Jane Grimwood; Paul Havlak; Uffe Hellsten; Dian-Han Kuo; Tomas Larsson; David R Lindberg; Jie Lv; Ferdinand Marletaz; Kazutoyo Osoegawa; Robert P Otillar; Nicholas Putnam; Dan S Rokhsar
Insights into bilaterian evolution from three spiralian genomes.
Veronica J Murtagh; Denis O'Meally; Andrew J Pask; Marilyn B Renfree; Natasha Sankovic; Atsushi Toyoda; Jeffrey L Boore; Margaret L Delbridge; Asao Fujiyama; Jennifer A Marshall Graves; Kristen S Jordan; Yoko Kuroki; Paul D Waters
Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution.
Randor Radakovits; Robert E Settlage; Hongseok Tae; Jeffrey L Boore; Susan I Fuerstenberg; Robert E Jinkerson; Matthew C Posewitz
Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana.

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All Publications

2013: Oleg Simakov; Astrid Y Terry; David A Weisblat; Robert Savage; Elaine C Seaver; Harris Shapiro; Andrea Aerts; Detlev Arendt; Jeffrey L Boore; Jarrod A Chapman; Sung-Jin Cho; Pieter de Jong; Eric Edsinger-Gonzales; Igor V Grigoriev; Jane Grimwood; Paul Havlak; Uffe Hellsten; Dian-Han Kuo; Tomas Larsson; David R Lindberg; Jie Lv; Ferdinand Marletaz; Kazutoyo Osoegawa; Robert P Otillar; Nicholas Putnam; Dan S Rokhsar
Insights into bilaterian evolution from three spiralian genomes.
Nature 2013;493(7433):526-31.
2012: Veronica J Murtagh; Denis O'Meally; Andrew J Pask; Marilyn B Renfree; Natasha Sankovic; Atsushi Toyoda; Jeffrey L Boore; Margaret L Delbridge; Asao Fujiyama; Jennifer A Marshall Graves; Kristen S Jordan; Yoko Kuroki; Paul D Waters
Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution.
Genome research 2012;22(3):498-507.
2012: Randor Radakovits; Robert E Settlage; Hongseok Tae; Jeffrey L Boore; Susan I Fuerstenberg; Robert E Jinkerson; Matthew C Posewitz
Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana.
Nature communications 2012;3():686.
2011: Shuai Zhan; Jeffrey L Boore; Christine Merlin; Steven M Reppert
The monarch butterfly genome yields insights into long-distance migration.
Cell 2011;147(5):1171-85.
2011: Mónica Medina; Shruti Lal; Yvonne Vallès; Tori L Takaoka; Benoît A Dayrat; Jeffrey L Boore; Terrence Gosliner
Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics.
Marine genomics 2011;4(1):51-9.
2011: Kelly E O'Quin; Jane Schulte; Daniel Smith; J Todd Streelman; Jeffrey L Boore; Samuel D Engel; Yong-Hwee E Loh; Zan Naseer; Karen L Carleton
Divergence in cis-regulatory sequences surrounding the opsin gene arrays of African cichlid fishes.
BMC evolutionary biology 2011;11():120.
2011: Mary M Guisinger; Jennifer V Kuehl; Jeffrey L Boore; Robert K Jansen
Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage.
Molecular biology and evolution 2011;28(1):583-600.
2010: Francesco Nardi; Antonio Carapelli; Jeffrey L Boore; G K Roderick; Romano Dallai; Franco Frati
Domestication of olive fly through a multi-regional host shift to cultivated olives: comparative dating using complete mitochondrial genomes.
Molecular phylogenetics and evolution 2010;57(2):678-86.
2010: Christine L Stone; Martha Lucia Posada Buitrago; Jeffrey L Boore; Reid D Frederick
Analysis of the complete mitochondrial genome sequences of the soybean rust pathogens phakopsora pachyrhizi and p. meibomiae.
Mycologia 2010;102(4):887-97.
2010: Mary M Guisinger; Jeffrey L Boore; Timothy W Chumley; Jennifer V Kuehl; Robert K Jansen
Implications of the plastid genome sequence of typha (typhaceae, poales) for understanding genome evolution in poaceae.
Journal of molecular evolution 2010;70(2):149-66.
2010: Kenneth G Karol; Kathiravetpillai Arumuganathan; Jeffrey L Boore; Aaron M Duffy; Karin D E Everett; John D Hall; S Kellon Hansen; Jennifer V Kuehl; Dina F Mandoli; Brent D Mishler; Richard G Olmstead; Karen S Renzaglia; Paul G Wolf
Complete plastome sequences of Equisetum arvense and Isoetes flaccida: implications for phylogeny and plastid genome evolution of early land plant lineages.
BMC evolutionary biology 2010;10():321.
2010: Timothy A Rawlings; Martin J MacInnis; Rüdiger Bieler; Jeffrey L Boore; Timothy M Collins
Sessile snails, dynamic genomes: gene rearrangements within the mitochondrial genome of a family of caenogastropod molluscs.
BMC genomics 2010;11():440.
2010: Omar Rota-Stabelli; Ehsan Kayal; Dianne Gleeson; Jennifer Daub; Jeffrey L Boore; Maximilian J Telford; Davide Pisani; Mark Blaxter; Dennis Lavrov
Ecdysozoan mitogenomics: evidence for a common origin of the legged invertebrates, the Panarthropoda.
Genome biology and evolution 2010;2():425-40.
2010: Melvin J Oliver; Andrew G Murdock; Brent D Mishler; Jennifer V Kuehl; Jeffrey L Boore; Dina F Mandoli; Karin D E Everett; Paul G Wolf; Aaron M Duffy; Kenneth G Karol
Chloroplast genome sequence of the moss Tortula ruralis: gene content, polymorphism, and structural arrangement relative to other green plant chloroplast genomes.
BMC genomics 2010;11():143.
2010: Giulia Torricelli; Antonio Carapelli; Peter Convey; Francesco Nardi; Jeffrey L Boore; Francesco Frati
High divergence across the whole mitochondrial genome in the "pan-Antarctic" springtail Friesea grisea: evidence for cryptic species?
Gene 2010;449(1-2):30-40.
2009: Richard H Baker; Jenna Morgan; Xianhui Wang; Jeffrey L Boore; Gerald S Wilkinson
Genomic analysis of a sexually-selected character: EST sequencing and microarray analysis of eye-antennal imaginal discs in the stalk-eyed fly Teleopsis dalmanni (Diopsidae).
BMC genomics 2009;10():361.
2009: Joel R McNeal; Jennifer V Kuehl; Jeffrey L Boore; Jim Leebens-Mack; Claude W dePamphilis
Parallel loss of plastid introns and their maturase in the genus Cuscuta.
PloS one 2009;4(6):e5982.
2008: Zhengqiu Cai; Mary Guisinger; Hyi-Gyung Kim; Elizabeth Ruck; John C Blazier; Vanity McMurtry; Jennifer V Kuehl; Jeffrey L Boore; Robert K Jansen
Extensive reorganization of the plastid genome of Trifolium subterraneum (Fabaceae) is associated with numerous repeated sequences and novel DNA insertions.
Journal of molecular evolution 2008;67(6):696-704.
2008: Mary M Guisinger; Jennifer V Kuehl; Jeffrey L Boore; Robert K Jansen
Genome-wide analyses of Geraniaceae plastid DNA reveal unprecedented patterns of increased nucleotide substitutions.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(47):18424-9.
2008: Sharon J Anderson; Christine L Stone; Martha Lucia Posada-Buitrago; Jeffrey L Boore; Beena A Neelam; Robert M Stephens; Douglas G Luster; Reid D Frederick; Kerry F Pedley
Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi.
Molecular ecology resources 2008;8(6):1310-2.
2008: Susan E Masta; Jeffrey L Boore
Parallel evolution of truncated transfer RNA genes in arachnid mitochondrial genomes.
Molecular biology and evolution 2008;25(5):949-59.
2008: Jeffrey L Boore; Susan I Fuerstenberg
Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2008;363(1496):1445-51.
2008: Rosemarie C Haberle; H Matthew Fourcade; Jeffrey L Boore; Robert K Jansen
Extensive rearrangements in the chloroplast genome of Trachelium caeruleum are associated with repeats and tRNA genes.
Journal of molecular evolution 2008;66(4):350-61.
2008: Norman J Wickett; Yan Zhang; S Kellon Hansen; Jessie M Roper; Jennifer V Kuehl; Sheila A Plock; Paul G Wolf; Claude W dePamphilis; Jeffrey L Boore; Bernard Goffinet
Functional gene losses occur with minimal size reduction in the plastid genome of the parasitic liverwort Aneura mirabilis.
Molecular biology and evolution 2008;25(2):393-401.
2008: Skip R McCoy; Jennifer V Kuehl; Jeffrey L Boore; Linda A Raubeson
The complete plastid genome sequence of Welwitschia mirabilis: an unusually compact plastome with accelerated divergence rates.
BMC evolutionary biology 2008;8():130.
2008: Rachel Lockridge Mueller; T Ryan Gregory; Sean M Gregory; Alice Hsieh; Jeffrey L Boore
Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders.
Zoology (Jena, Germany) 2008;111(3):218-30.
2008: Yvonne Vallès; Kenneth M Halanych; Jeffrey L Boore
Group II introns break new boundaries: presence in a bilaterian's genome.
PloS one 2008;3(1):e1488.
2007: Robert K Jansen; Zhengqiu Cai; Linda A Raubeson; Henry Daniell; Claude W dePamphilis; Jim Leebens-Mack; Kai F Müller; Mary Guisinger-Bellian; Rosemarie C Haberle; Anne K Hansen; Timothy W Chumley; Seung-Bum Lee; Rhiannon Peery; Joel R McNeal; Jennifer V Kuehl; Jeffrey L Boore
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(49):19369-74.
2007: Matthew K Fujita; Jeffrey L Boore; Craig Moritz
Multiple origins and rapid evolution of duplicated mitochondrial genes in parthenogenetic geckos (Heteronotia binoei; Squamata, Gekkonidae).
Molecular biology and evolution 2007;24(12):2775-86.
2007: Debra R Hansen; Sayantani G Dastidar; Zhengqiu Cai; Cynthia Penaflor; Jennifer V Kuehl; Jeffrey L Boore; Robert K Jansen
Phylogenetic and evolutionary implications of complete chloroplast genome sequences of four early-diverging angiosperms: Buxus (Buxaceae), Chloranthus (Chloranthaceae), Dioscorea (Dioscoreaceae), and Illicium (Schisandraceae).
Molecular phylogenetics and evolution 2007;45(2):547-63.
2007: Frank N Martin; Douda Bensasson; Brett M Tyler; Jeffrey L Boore
Mitochondrial genome sequences and comparative genomics of Phytophthora ramorum and P. sojae.
Current genetics 2007;51(5):285-96.
2007: Ruth E Timme; Jennifer V Kuehl; Jeffrey L Boore; Robert K Jansen
A comparative analysis of the Lactuca and Helianthus (Asteraceae) plastid genomes: identification of divergent regions and categorization of shared repeats.
American journal of botany 2007;94(3):302-12.
2007: Joel R McNeal; Kathiravetpilla Arumugunathan; Jennifer V Kuehl; Jeffrey L Boore; Claude W dePamphilis
Systematics and plastid genome evolution of the cryptically photosynthetic parasitic plant genus Cuscuta (Convolvulaceae).
BMC biology 2007;5():55.
2007: Joel R McNeal; Jennifer V Kuehl; Jeffrey L Boore; Claude W de Pamphilis
Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta.
BMC plant biology 2007;7():57.
2007: Simone Hoegg; Jeffrey L Boore; Jennifer V Kuehl; Axel Meyer
Comparative phylogenomic analyses of teleost fish Hox gene clusters: lessons from the cichlid fish Astatotilapia burtoni.
BMC genomics 2007;8():317.
2007: Linda A Raubeson; Rhiannon Peery; Timothy W Chumley; Chris Dziubek; H Matthew Fourcade; Jeffrey L Boore; Robert K Jansen
Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus.
BMC genomics 2007;8():174.
2006: Konstantinos Krampis; Brett M Tyler; Jeffrey L Boore
Extensive variation in nuclear mitochondrial DNA content between the genomes of Phytophthora sojae and Phytophthora ramorum.
Molecular plant-microbe interactions : MPMI 2006;19(12):1329-36.
2006: Timothy W Chumley; Jeffrey D Palmer; Jeffrey P Mower; H Matthew Fourcade; Patrick J Calie; Jeffrey L Boore; Robert K Jansen
The complete chloroplast genome sequence of Pelargonium x hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants.
Molecular biology and evolution 2006;23(11):2175-90.
2006: Lars Podsiadlowski; Antonio Carapelli; Francesco Nardi; Romano Dallai; M Koch; Jeffrey L Boore; Franco Frati
The mitochondrial genomes of Campodea fragilis and Campodea lubbocki (Hexapoda: Diplura): High genetic divergence in a morphologically uniform taxon.
Gene 2006;381():49-61.
2006: Yvonne Vallès; Jeffrey L Boore
Lophotrochozoan mitochondrial genomes.
Integrative and comparative biology 2006;46(4):544-57.
2006: Jeffrey L Boore
The use of genome-level characters for phylogenetic reconstruction.
Trends in ecology & evolution 2006;21(8):439-46.
2006: Antonio Carapelli; Laura Vannini; Francesco Nardi; Jeffrey L Boore; Laura Beani; Romano Dallai; Francesco Frati
The mitochondrial genome of the entomophagous endoparasite Xenos vesparum (Insecta: Strepsiptera).
Gene 2006;376(2):248-59.
2006: Joel R McNeal; Jim Leebens-Mack; Kathiravetpilla Arumuganathan; Jennifer V Kuehl; Jeffrey L Boore; Claude W dePamphilis
Using partial genomic fosmid libraries for sequencing complete organellar genomes.
BioTechniques 2006;41(1):69-73.
2006: Mónica Medina; Allen G Collins; Tori L Takaoka; Jennifer V Kuehl; Jeffrey L Boore
Naked corals: skeleton loss in Scleractinia.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(24):9096-100.
2006: W Brian Simison; David R Lindberg; Jeffrey L Boore
Rolling circle amplification of metazoan mitochondrial genomes.
Molecular phylogenetics and evolution 2006;39(2):562-7.
2006: Zhengqiu Cai; Cynthia Penaflor; Jennifer V Kuehl; Jim Leebens-Mack; John E Carlson; Claude W dePamphilis; Jeffrey L Boore; Robert K Jansen
Complete plastid genome sequences of Drimys, Liriodendron, and Piper: implications for the phylogenetic relationships of magnoliids.
BMC evolutionary biology 2006;6():77.
2006: Jeffrey L Boore
Requirements and standards for organelle genome databases.
Omics : a journal of integrative biology 2006;10(2):119-26.
2006: Jeffrey L Boore
The complete sequence of the mitochondrial genome of Nautilus macromphalus (Mollusca: Cephalopoda).
BMC genomics 2006;7():182.
2006: Paramvir S Dehal; Jeffrey L Boore
A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database.
BMC bioinformatics 2006;7():201.
2006: James F Parham; Chris R Feldman; Jeffrey L Boore
The complete mitochondrial genome of the enigmatic bigheaded turtle (Platysternon): description of unusual genomic features and the reconciliation of phylogenetic hypotheses based on mitochondrial and nuclear DNA.
BMC evolutionary biology 2006;6():11.
2006: James F Parham; J Robert Macey; Theodore J Papenfuss; Chris R Feldman; Oguz Türkozan; Rosa Polymeni; Jeffrey L Boore
The phylogeny of Mediterranean tortoises and their close relatives based on complete mitochondrial genome sequences from museum specimens.
Molecular phylogenetics and evolution 2006;38(1):50-64.
2005: Paramvir Dehal; Jeffrey L Boore
Two rounds of whole genome duplication in the ancestral vertebrate.
PLoS biology 2005;3(10):e314.
2005: Rachel Lockridge Mueller; Jeffrey L Boore
Molecular mechanisms of extensive mitochondrial gene rearrangement in plethodontid salamanders.
Molecular biology and evolution 2005;22(10):2104-12.
2005: Jim Leebens-Mack; Linda A Raubeson; Liying Cui; Jennifer V Kuehl; Matthew H Fourcade; Timothy W Chumley; Jeffrey L Boore; Robert K Jansen; Claude W dePamphilis
Identifying the basal angiosperm node in chloroplast genome phylogenies: sampling one's way out of the Felsenstein zone.
Molecular biology and evolution 2005;22(10):1948-63.
2005: J Robert Macey; Jonathan J Fong; Jennifer V Kuehl; Soheila Shafiei; Natalia B Ananjeva; Theodore J Papenfuss; Jeffrey L Boore
The complete mitochondrial genome of a gecko and the phylogenetic position of the Middle Eastern Teratoscincus keyserlingii.
Molecular phylogenetics and evolution 2005;36(1):188-93.
2005: Paul G Wolf; Kenneth G Karol; Dina F Mandoli; Jennifer V Kuehl; Kathiravetpilla Arumuganathan; Mark W Ellis; Brent D Mishler; Dean G Kelch; Richard G Olmstead; Jeffrey L Boore
The first complete chloroplast genome sequence of a lycophyte, Huperzia lucidula (Lycopodiaceae).
Gene 2005;350(2):117-28.
2005: Robert K Jansen; Linda A Raubeson; Jeffrey L Boore; Claude W dePamphilis; Timothy W Chumley; Rosemarie C Haberle; Stacia K Wyman; Andrew J Alverson; Rhiannon Peery; Sallie J Herman; H Matthew Fourcade; Jennifer V Kuehl; Joel R McNeal; Jim Leebens-Mack; Liying Cui
Methods for obtaining and analyzing whole chloroplast genome sequences.
Methods in enzymology 2005;395():348-84.
2005: Jeffrey L Boore; J Robert Macey; Mónica Medina
Sequencing and comparing whole mitochondrial genomes of animals.
Methods in enzymology 2005;395():311-48.
2004: Stacia K Wyman; Robert K Jansen; Jeffrey L Boore
Automatic annotation of organellar genomes with DOGMA.
Bioinformatics (Oxford, England) 2004;20(17):3252-5.
2004: Iñaki Ruiz-Trillo; Marta Riutort; H Matthew Fourcade; Jaume Baguñà; Jeffrey L Boore
Mitochondrial genome data support the basal position of Acoelomorpha and the polyphyly of the Platyhelminthes.
Molecular phylogenetics and evolution 2004;33(2):321-32.
2004: J Robert Macey; Theodore J Papenfuss; Jennifer V Kuehl; H Matthew Fourcade; Jeffrey L Boore
Phylogenetic relationships among amphisbaenian reptiles based on complete mitochondrial genomic sequences.
Molecular phylogenetics and evolution 2004;33(1):22-31.
2004: Rachel Lockridge Mueller; J Robert Macey; Martin Jaekel; David B Wake; Jeffrey L Boore
Morphological homoplasy, life history evolution, and historical biogeography of plethodontid salamanders inferred from complete mitochondrial genomes.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(38):13820-5.
2004: Jeffrey L Boore
Complete mitochondrial genome sequence of Urechis caupo, a representative of the phylum Echiura.
BMC genomics 2004;5():67.
2004: Jeffrey L Boore; Monica Medina; Lewis A Rosenberg
Complete sequences of the highly rearranged molluscan mitochondrial genomes of the Scaphopod Graptacme eborea and the bivalve Mytilus edulis.
Molecular biology and evolution 2004;21(8):1492-503.
2004: Kevin G Helfenbein; H Matthew Fourcade; Rohit G Vanjani; Jeffrey L Boore
The mitochondrial genome of Paraspadella gotoi is highly reduced and reveals that chaetognaths are a sister group to protostomes.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(29):10639-43.
2004: Douda Bensasson; Jeffrey L Boore; Kaare M Nielsen
Genes without frontiers?
Heredity 2004;92(6):483-9.
2004: Susan E Masta; Jeffrey L Boore
The complete mitochondrial genome sequence of the spider Habronattus oregonensis reveals rearranged and extremely truncated tRNAs.
Molecular biology and evolution 2004;21(5):893-902.
2004: Dennis Lavrov; Wesley M Brown; Jeffrey L Boore
Phylogenetic position of the Pentastomida and (pan)crustacean relationships.
Proceedings. Biological sciences / The Royal Society 2004;271(1538):537-44.
2004: Kevin G Helfenbein; Jeffrey L Boore
The mitochondrial genome of Phoronis architecta--comparisons demonstrate that phoronids are lophotrochozoan protostomes.
Molecular biology and evolution 2004;21(1):153-7.
2003: Marco Passamonti; Jeffrey L Boore; Valerio Scali
Molecular evolution and recombination in gender-associated mitochondrial DNAs of the Manila clam Tapes philippinarum.
Genetics 2003;164(2):603-11.
2003: Simona Santini; Jeffrey L Boore; Axel Meyer
Evolutionary conservation of regulatory elements in vertebrate Hox gene clusters.
Genome research 2003;13(6A):1111-22.
2003: Francesco Nardi; Giacomo Spinsanti; Jeffrey L Boore; Antonio Carapelli; Romano Dallai; Francesco Frati
Hexapod origins: monophyletic or paraphyletic?
Science (New York, N.Y.) 2003;299(5614):1887-9.
2002: Dennis Lavrov; Jeffrey L Boore; Wesley M Brown
Complete mtDNA sequences of two millipedes suggest a new model for mitochondrial gene rearrangements: duplication and nonrandom loss.
Molecular biology and evolution 2002;19(2):163-9.
2002: Jeffrey L Boore; Joseph L Staton
The mitochondrial genome of the Sipunculid Phascolopsis gouldii supports its association with Annelida rather than Mollusca.
Molecular biology and evolution 2002;19(2):127-37.
2001: Kevin G Helfenbein; Wesley M Brown; Jeffrey L Boore
The complete mitochondrial genome of the articulate brachiopod Terebratalia transversa.
Molecular biology and evolution 2001;18(9):1734-44.
2001: M von Nickisch-Rosenegk; Wesley M Brown; Jeffrey L Boore
Complete sequence of the mitochondrial genome of the tapeworm Hymenolepis diminuta: gene arrangements indicate that Platyhelminths are Eutrochozoans.
Molecular biology and evolution 2001;18(5):721-30.
2000: Dennis Lavrov; Wesley M Brown; Jeffrey L Boore
A novel type of RNA editing occurs in the mitochondrial tRNAs of the centipede Lithobius forficatus.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(25):13738-42.
2000: Dennis Lavrov; Jeffrey L Boore; Wesley M Brown
The complete mitochondrial DNA sequence of the horseshoe crab Limulus polyphemus.
Molecular biology and evolution 2000;17(5):813-24.
2000: Jeffrey L Boore; Wesley M Brown
Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that Pogonophora is not a phylum and Annelida and Arthropoda are not sister taxa.
Molecular biology and evolution 2000;17(1):87-106.
1999: Jeffrey L Boore; S I Fuerstenberg
Entamoeba histolytica: a derived, mitochondriate eukaryote?
Trends in microbiology 1999;7(11):426-8.
1999: Jeffrey L Boore
Animal mitochondrial genomes.
Nucleic acids research 1999;27(8):1767-80.
1999: Jeffrey L Boore; L L Daehler; Wesley M Brown
Complete sequence, gene arrangement, and genetic code of mitochondrial DNA of the cephalochordate Branchiostoma floridae (Amphioxus)
Molecular biology and evolution 1999;16(3):410-8.
1998: Jeffrey L Boore; Wesley M Brown
Big trees from little genomes: mitochondrial gene order as a phylogenetic tool.
Current opinion in genetics & development 1998;8(6):668-74.
1998: Jeffrey L Boore; Dennis Lavrov; Wesley M Brown
Gene translocation links insects and crustaceans.
Nature 1998;392(6677):667-8.
1997: Jeffrey L Boore
Transmission of mitochondrial DNA--playing favorites?
BioEssays : news and reviews in molecular, cellular and developmental biology 1997;19(9):751-3.
1995: Jeffrey L Boore; Wesley M Brown
Complete sequence of the mitochondrial DNA of the annelid worm Lumbricus terrestris.
Genetics 1995;141(1):305-19.
1995: Jeffrey L Boore; T M Collins; D Stanton; L L Daehler; Wesley M Brown
Deducing the pattern of arthropod phylogeny from mitochondrial DNA rearrangements.
Nature 1995;376(6536):163-5.
1994: Jeffrey L Boore; Wesley M Brown
Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicata.
Genetics 1994;138(2):423-43.
1992: R J Hoffmann; Jeffrey L Boore; Wesley M Brown
A novel mitochondrial genome organization for the blue mussel, Mytilus edulis.
Genetics 1992;131(2):397-412.