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Akiko Tanaka

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Yoriko Saito; Mikako Shirouzu; Leonard D Shultz; Akiko Sone; Nahoko Suzuki; Shinsuke Takagi; Akiko Tanaka; Satoshi Tanaka; Shuichi Taniguchi; Yuri Tomabechi; Mariko Tomizawa-Murasawa; Naoyuki Uchida; Motoaki Wakiyama; Shigeyuki Yokoyama; Hitomi Yuki; Yuki Aoki; Takehiro Fukami; Toshio Goto; Noriko Handa; Yoshinobu Hashizume; Teruki Honma; Hiroshi Kajita; Akiko Kaneko; Mitsuo Kuratani; Junko Mikuni; Yuho Najima; Ikuko Ogahara; Osamu Ohara; Fumihiko Ishikawa
A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo.
Tomoo Shiba; Gen Takahashi; Akiko Tanaka; Ryoko Tatsumi; Chiaki Tsuge; Shigeru Matsuoka; Anthony L Moore; Takeshi Nara; Hiroyuki Saimoto; Kimitoshi Sakamoto; Takashi Aoki; Emmanuel Oluwadare Balogun; Shigeharu Harada; Teruki Honma; Daniel Ken Inaoka; Masayuki Inoue; Yasutoshi Kido; Kiyoshi Kita
Structure of the trypanosome cyanide-insensitive alternative oxidase.
Keiko Tsuganezawa; Rei Utata; Shigeyuki Yokoyama; Shigenao Taruya; Masaaki Aoki; Morio Endoh; Yoshinobu Hashizume; Teruki Honma; Takuma Kasai; Miki Kato; Takanori Kigawa; Hirotatsu Kojima; Masumi Mori; Tetsuo Nagano; Yukari Nakagawa; Naoko Ogawa; Takayoshi Okabe; Fumio Takahashi; Akiko Tanaka
A fluorescent-based high-throughput screening assay for small molecules that inhibit the interaction of MdmX with p53.

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All Publications

2013: Yoriko Saito; Mikako Shirouzu; Leonard D Shultz; Akiko Sone; Nahoko Suzuki; Shinsuke Takagi; Akiko Tanaka; Satoshi Tanaka; Shuichi Taniguchi; Yuri Tomabechi; Mariko Tomizawa-Murasawa; Naoyuki Uchida; Motoaki Wakiyama; Shigeyuki Yokoyama; Hitomi Yuki; Yuki Aoki; Takehiro Fukami; Toshio Goto; Noriko Handa; Yoshinobu Hashizume; Teruki Honma; Hiroshi Kajita; Akiko Kaneko; Mitsuo Kuratani; Junko Mikuni; Yuho Najima; Ikuko Ogahara; Osamu Ohara; Fumihiko Ishikawa
A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo.
Science translational medicine 2013;5(181):181ra52.
2013: Tomoo Shiba; Gen Takahashi; Akiko Tanaka; Ryoko Tatsumi; Chiaki Tsuge; Shigeru Matsuoka; Anthony L Moore; Takeshi Nara; Hiroyuki Saimoto; Kimitoshi Sakamoto; Takashi Aoki; Emmanuel Oluwadare Balogun; Shigeharu Harada; Teruki Honma; Daniel Ken Inaoka; Masayuki Inoue; Yasutoshi Kido; Kiyoshi Kita
Structure of the trypanosome cyanide-insensitive alternative oxidase.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(12):4580-5.
2013: Keiko Tsuganezawa; Rei Utata; Shigeyuki Yokoyama; Shigenao Taruya; Masaaki Aoki; Morio Endoh; Yoshinobu Hashizume; Teruki Honma; Takuma Kasai; Miki Kato; Takanori Kigawa; Hirotatsu Kojima; Masumi Mori; Tetsuo Nagano; Yukari Nakagawa; Naoko Ogawa; Takayoshi Okabe; Fumio Takahashi; Akiko Tanaka
A fluorescent-based high-throughput screening assay for small molecules that inhibit the interaction of MdmX with p53.
Journal of biomolecular screening 2013;18(2):191-8.
2012: Naoko Ogawa; Hitomi Yuki; Akiko Tanaka
Insights from Pim1 structure for anti-cancer drug design.
Expert opinion on drug discovery 2012;7(12):1177-92.
2012: Lorien J Parker; Mikako Shirouzu; Noriko Handa; Teruki Honma; Tetsuo Nagano; Naoko Ogawa; Yuri Tomabechi; Keiko Tsuganezawa; Hisami Watanabe; Shigeyuki Yokoyama; Hitomi Yuki; Akiko Tanaka
Flexibility of the P-loop of Pim-1 kinase: observation of a novel conformation induced by interaction with an inhibitor.
Acta crystallographica. Section F, Structural biology and crystallization communications 2012;68(Pt 8):860-6.
2012: Tomohiro Sato; Mikako Shirouzu; Akiko Tanaka; Yumiko Terazawa; Keiko Tsuganezawa; Motoaki Wakiyama; Hisami Watanabe; Shigeyuki Yokoyama; Seiko Yoshikawa; Hitomi Yuki; Hirotatsu Kojima; Mutsuko Kukimoto-Niino; Junko Mikuni; Tetsuo Nagano; Takayoshi Okabe; Takako Fujimoto; Teruki Honma
Identification of novel drug-resistant EGFR mutant inhibitors by in silico screening using comprehensive assessments of protein structures.
Bioorganic & medicinal chemistry 2012;20(12):3756-67.
2012: Hirofumi Nakano; Takayoshi Okabe; Lorien Parker; Nae Saito; Yukio Tada; Akiko Tanaka; Keiko Tsuganezawa; Shigeyuki Yokoyama; Masanao Abe; Hirotatsu Kojima; Tetsuo Nagano
Rational evolution of a novel type of potent and selective proviral integration site in Moloney murine leukemia virus kinase 1 (PIM1) inhibitor from a screening-hit compound.
Journal of medicinal chemistry 2012;55(11):5151-64.
2012: Keiko Tsuganezawa; Hisami Watanabe; Shigeyuki Yokoyama; Hitomi Yuki; Shigenao Taruya; Yuri Tomabechi; Noriko Handa; Teruki Honma; Daisuke Kamei; Hirotatsu Kojima; Masumi Mori; Tetsuo Nagano; Yukari Nakagawa; Naoko Ogawa; Takayoshi Okabe; Lorien Parker; Akiko Tanaka
A novel Pim-1 kinase inhibitor targeting residues that bind the substrate peptide.
Journal of molecular biology 2012;417(3):240-52.
2011: Kengo Tsuda; Tatsuhiko Someya; Kanako Kuwasako; Mari Takahashi; Fahu He; Satoru Unzai; Makoto Inoue; Takushi Harada; Satoru Watanabe; Takaho Terada; Naohiro Kobayashi; Mikako Shirouzu; Takanori Kigawa; Akiko Tanaka; Sumio Sugano; Peter Güntert; Shigeyuki Yokoyama; Yutaka Muto
Structural basis for the dual RNA-recognition modes of human Tra2-β RRM.
Nucleic acids research 2011;39(4):1538-53.
2010: Alexander K Goroncy; Seizo Koshiba; Naoya Tochio; Tadashi Tomizawa; Makoto Inoue; Akiko Tanaka; Sumio Sugano; Takanori Kigawa; Shigeyuki Yokoyama
Solution structure of the C-terminal DUF1000 domain of the human thioredoxin-like 1 protein.
Proteins 2010;78(9):2176-80.
2010: Junko Mikuni; Miki Kato; Shigenao Taruya; Keiko Tsuganezawa; Masumi Mori; Naoko Ogawa; Teruki Honma; Shigeyuki Yokoyama; Hirotatsu Kojima; Takayoshi Okabe; Tetsuo Nagano; Akiko Tanaka
A fluorescence correlation spectroscopy-based assay for fragment screening of slowly inhibiting protein-peptide interaction inhibitors.
Analytical biochemistry 2010;402(1):26-31.
2010: Seizo Koshiba; Hua Li; Yoko Motoda; Tadashi Tomizawa; Takuma Kasai; Naoya Tochio; Takashi Yabuki; Takushi Harada; Satoru Watanabe; Akiko Tanaka; Mikako Shirouzu; Takanori Kigawa; Tadashi Yamamoto; Shigeyuki Yokoyama
Structural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2.
Journal of structural and functional genomics 2010;11(2):125-41.
2010: Alexander K Goroncy; Seizo Koshiba; Naoya Tochio; Tadashi Tomizawa; Makoto Inoue; Makato Inoue; Satoru Watanabe; Takushi Harada; Akiko Tanaka; Osamu Ohara; Takanori Kigawa; Shigeyuki Yokoyama
The NMR solution structures of the five constituent cold-shock domains (CSD) of the human UNR (upstream of N-ras) protein.
Journal of structural and functional genomics 2010;11(2):181-8.
2010: Takashi Umehara; Yoshihiro Nakamura; Moon Kyoo Jang; Kazumi Nakano; Akiko Tanaka; Keiko Ozato; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Structural basis for acetylated histone H4 recognition by the human BRD2 bromodomain.
The Journal of biological chemistry 2010;285(10):7610-8.
2010: Emmanuel Oluwadare Balogun; Daniel Ken Inaoka; Yasutoshi Kido; Tomoo Shiba; Takeshi Nara; Takashi Aoki; Teruki Honma; Akiko Tanaka; Masayuki Inoue; Shigeru Matsuoka; Paul A M Michels; Shigeharu Harada; Kiyoshi Kita
Overproduction, purification, crystallization and preliminary X-ray diffraction analysis of Trypanosoma brucei gambiense glycerol kinase.
Acta crystallographica. Section F, Structural biology and crystallization communications 2010;66(Pt 3):304-8.
2010: Yasutoshi Kido; Tomoo Shiba; Daniel Ken Inaoka; Kimitoshi Sakamoto; Takeshi Nara; Takashi Aoki; Teruki Honma; Akiko Tanaka; Masayuki Inoue; Shigeru Matsuoka; Anthony Moore; Shigeharu Harada; Kiyoshi Kita
Crystallization and preliminary crystallographic analysis of cyanide-insensitive alternative oxidase from Trypanosoma brucei brucei.
Acta crystallographica. Section F, Structural biology and crystallization communications 2010;66(Pt 3):275-8.
2010: Meiri Shida; Akihiko Arakawa; Ryohei Ishii; Seiichiro Kishishita; Tetsuo Takagi; Mutsuko Kukimoto-Niino; Sumio Sugano; Akiko Tanaka; Mikako Shirouzu; Shigeyuki Yokoyama
Direct inter-subdomain interactions switch between the closed and open forms of the Hsp70 nucleotide-binding domain in the nucleotide-free state.
Acta crystallographica. Section D, Biological crystallography 2010;66(Pt 3):223-32.
2009: Alexander K Goroncy; Seizo Koshiba; Naoya Tochio; Tadashi Tomizawa; Manami Sato; Makato Inoue; Satoru Watanabe; Yoshihide Hayashizaki; Akiko Tanaka; Takanori Kigawa; Shigeyuki Yokoyama
NMR solution structures of actin depolymerizing factor homology domains.
Protein science : a publication of the Protein Society 2009;18(11):2384-92.
2009: Fahu He; Kohei Saito; Naohiro Kobayashi; Takushi Harada; Satoru Watanabe; Takanori Kigawa; Peter Güntert; Osamu Ohara; Akiko Tanaka; Satoru Unzai; Yutaka Muto; Shigeyuki Yokoyama
Structural and functional characterization of the NHR1 domain of the Drosophila neuralized E3 ligase in the notch signaling pathway.
Journal of molecular biology 2009;393(2):478-95.
2009: Hongfei Wang; Chie Takemoto; Ryogo Akasaka; Tomomi Uchikubo-Kamo; Seiichiro Kishishita; Kazutaka Murayama; Takaho Terada; Lirong Chen; Zhi-Jie Liu; Bi-Cheng Wang; Sumio Sugano; Akiko Tanaka; Makoto Inoue; Takanori Kigawa; Mikako Shirouzu; Shigeyuki Yokoyama
Novel dimerization mode of the human Bcl-2 family protein Bak, a mitochondrial apoptosis regulator.
Journal of structural biology 2009;166(1):32-7.
2008: Kanako Kuwasako; Mari Takahashi; Naoya Tochio; Chikage Abe; Kengo Tsuda; Makoto Inoue; Takaho Terada; Mikako Shirouzu; Naohiro Kobayashi; Takanori Kigawa; Seiichi Taguchi; Akiko Tanaka; Yoshihide Hayashizaki; Peter Güntert; Yutaka Muto; Shigeyuki Yokoyama
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
Biochemistry 2008;47(24):6437-50.
2008: Masumi Mori; Naoko Ogawa; Kunihiro Tanikawa; Sanae Dodo; Sotaro Shibayama; Shigeyuki Yokoyama; Akiko Tanaka
Contribution of structural biology to clinically validated target proteins.
Drug discovery today 2008;13(11-12):469-72.
2007: Noriko Handa; Seiichiro Kishishita; Satoshi Morita; Ryogo Akasaka; Zhongmin Jin; John Chrzas; Lirong Chen; Zhi-Jie Liu; Bi-Cheng Wang; Sumio Sugano; Akiko Tanaka; Takaho Terada; Mikako Shirouzu; Shigeyuki Yokoyama
Structure of the human Tim44 C-terminal domain in complex with pentaethylene glycol: ligand-bound form.
Acta crystallographica. Section D, Biological crystallography 2007;63(Pt 12):1225-34.
2007: Yoshihiro Nakamura; Takashi Umehara; Akiko Tanaka; Masami Horikoshi; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Structural basis for the recognition between the regulatory particles Nas6 and Rpt3 of the yeast 26S proteasome.
Biochemical and biophysical research communications 2007;359(3):503-9.
2007: Fahu He; Takashi Umehara; Kengo Tsuda; Makoto Inoue; Takanori Kigawa; Takayoshi Matsuda; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takaho Terada; Mikako Shirouzu; Akiko Tanaka; Sumio Sugano; Yutaka Muto; Shigeyuki Yokoyama
Solution structure of the zinc finger HIT domain in protein FON.
Protein science : a publication of the Protein Society 2007;16(8):1577-87.
2007: Takashi Umehara; Masatoshi Wakamori; Akiko Tanaka; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Purification, crystallization and preliminary X-ray diffraction of the C-terminal bromodomain from human BRD2.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 7):613-5.
2007: Yoshihiro Nakamura; Takashi Umehara; Hiroaki Hamana; Yoshihide Hayashizaki; Makoto Inoue; Takanori Kigawa; Mikako Shirouzu; Takaho Terada; Akiko Tanaka; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Crystal structure analysis of the PHD domain of the transcription co-activator Pygopus.
Journal of molecular biology 2007;370(1):80-92.
2007: Misao Yoneyama; Naoya Tochio; Takashi Umehara; Seizo Koshiba; Makoto Inoue; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Satoru Watanabe; Yasuko Tomo; Yuji Nishimura; Takushi Harada; Takaho Terada; Mikako Shirouzu; Yoshihide Hayashizaki; Osamu Ohara; Akiko Tanaka; Takanori Kigawa; Shigeyuki Yokoyama
Structural and functional differences of SWIRM domain subtypes.
Journal of molecular biology 2007;369(1):222-38.
2007: Atsushi Shimada; Hideaki Niwa; Kenichi Tsujita; Shiro Suetsugu; Koji Nitta; Kyoko Hanawa-Suetsugu; Ryogo Akasaka; Yuri Nishino; Mitsutoshi Toyama; Lirong Chen; Zhi-Jie Liu; Bi-Cheng Wang; Masaki Yamamoto; Takaho Terada; Atsuo Miyazawa; Akiko Tanaka; Sumio Sugano; Mikako Shirouzu; Kuniaki Nagayama; Tadaomi Takenawa; Shigeyuki Yokoyama
Curved EFC/F-BAR-domain dimers are joined end to end into a filament for membrane invagination in endocytosis.
Cell 2007;129(4):761-72.
2007: Yoshihiro Nakamura; Takashi Umehara; Akiko Tanaka; Masami Horikoshi; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Purification, crystallization and preliminary X-ray diffraction analysis of the non-ATPase subunit Nas6 in complex with the ATPase subunit Rpt3 of the 26S proteasome from Saccharomyces cerevisiae.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 3):190-2.
2007: Yoshihiro Nakamura; Takashi Umehara; Kazumi Nakano; Moon Kyoo Jang; Mikako Shirouzu; Satoshi Morita; Hiroko Uda-Tochio; Hiroaki Hamana; Takaho Terada; Naruhiko Adachi; Takehisa Matsumoto; Akiko Tanaka; Masami Horikoshi; Keiko Ozato; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Crystal structure of the human BRD2 bromodomain: insights into dimerization and recognition of acetylated histone H4.
The Journal of biological chemistry 2007;282(6):4193-201.
2007: Satoshi Ohnishi; Peter Güntert; Seizo Koshiba; Tadashi Tomizawa; Ryogo Akasaka; Naoya Tochio; Manami Sato; Makoto Inoue; Takushi Harada; Satoru Watanabe; Akiko Tanaka; Mikako Shirouzu; Takanori Kigawa; Shigeyuki Yokoyama
Solution structure of an atypical WW domain in a novel beta-clam-like dimeric form.
FEBS letters 2007;581(3):462-8.
2007: Yoshihiro Nakamura; Kazumi Nakano; Takashi Umehara; Mayumi Kimura; Yoshihide Hayashizaki; Akiko Tanaka; Masami Horikoshi; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Structure of the oncoprotein gankyrin in complex with S6 ATPase of the 26S proteasome.
Structure (London, England : 1993) 2007;15(2):179-89.
2006: Noriko Handa; Mutsuko Kukimoto-Niino; Ryogo Akasaka; Kazutaka Murayama; Takaho Terada; Makoto Inoue; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Emi Nunokawa; Akiko Tanaka; Yoshihide Hayashizaki; Takanori Kigawa; Mikako Shirouzu; Shigeyuki Yokoyama
Structure of the UNC5H2 death domain.
Acta crystallographica. Section D, Biological crystallography 2006;62(Pt 12):1502-9.
2006: Naoya Tochio; Seizo Koshiba; Naohiro Kobayashi; Makoto Inoue; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Yasuko Tomo; Yoko Motoda; Atsuo Kobayashi; Akiko Tanaka; Yoshihide Hayashizaki; Takaho Terada; Mikako Shirouzu; Takanori Kigawa; Shigeyuki Yokoyama
Solution structure of the kinase-associated domain 1 of mouse microtubule-associated protein/microtubule affinity-regulating kinase 3.
Protein science : a publication of the Protein Society 2006;15(11):2534-43.
2006: Mutsuko Kukimoto-Niino; Tetsuo Takagi; Ryogo Akasaka; Kazutaka Murayama; Tomomi Uchikubo-Kamo; Takaho Terada; Makoto Inoue; Satoru Watanabe; Akiko Tanaka; Yoshihide Hayashizaki; Takanori Kigawa; Mikako Shirouzu; Shigeyuki Yokoyama
Crystal structure of the RUN domain of the RAP2-interacting protein x.
The Journal of biological chemistry 2006;281(42):31843-53.
2006: Noriko Handa; Mutsuko Kukimoto-Niino; Ryogo Akasaka; Seiichiro Kishishita; Kazutaka Murayama; Takaho Terada; Makoto Inoue; Takanori Kigawa; Shingo Kose; Naoko Imamoto; Akiko Tanaka; Yoshihide Hayashizaki; Mikako Shirouzu; Shigeyuki Yokoyama
The crystal structure of mouse Nup35 reveals atypical RNP motifs and novel homodimerization of the RRM domain.
Journal of molecular biology 2006;363(1):114-24.
2006: Hiromi Okumura; Junko Nakazawa; Keiko Tsuganezawa; Takeo Usui; Hiroyuki Osada; Takehisa Matsumoto; Akiko Tanaka; Shigeyuki Yokoyama
Phenothiazine and carbazole-related compounds inhibit mitotic kinesin Eg5 and trigger apoptosis in transformed culture cells.
Toxicology letters 2006;166(1):44-52.
2006: Toshiyuki Hamada; Yoko Ito; Takamasa Abe; Fumiaki Hayashi; Peter Güntert; Makoto Inoue; Takanori Kigawa; Takaho Terada; Mikako Shirouzu; Mayumi Yoshida; Akiko Tanaka; Sumio Sugano; Shigeyuki Yokoyama; Hiroshi Hirota
Solution structure of the antifreeze-like domain of human sialic acid synthase.
Protein science : a publication of the Protein Society 2006;15(5):1010-6.
2006: Kazuhiko Yamasaki; Takanori Kigawa; Makoto Inoue; Tomoko Yamasaki; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Yasuko Tomo; Takaho Terada; Mikako Shirouzu; Akiko Tanaka; Motoaki Seki; Kazuo Shinozaki; Shigeyuki Yokoyama
An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure.
FEBS letters 2006;580(8):2109-16.
2006: Naoya Tochio; Takashi Umehara; Seizo Koshiba; Makoto Inoue; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Satoru Watanabe; Yasuko Tomo; Masaru Hanada; Masaomi Ikari; Miyuki Sato; Takaho Terada; Takahiro Nagase; Osamu Ohara; Mikako Shirouzu; Akiko Tanaka; Takanori Kigawa; Shigeyuki Yokoyama
Solution structure of the SWIRM domain of human histone demethylase LSD1.
Structure (London, England : 1993) 2006;14(3):457-68.
2005: Takashi Umehara; Yumi Otta; Keiko Tsuganezawa; Takehisa Matsumoto; Akiko Tanaka; Masami Horikoshi; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Purification, crystallization and preliminary X-ray diffraction analysis of the histone chaperone cia1 from fission yeast.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 11):971-3.
2005: Kazuhiko Yamasaki; Takanori Kigawa; Makoto Inoue; Tomoko Yamasaki; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Yasuko Tomo; Takaho Terada; Mikako Shirouzu; Akiko Tanaka; Motoaki Seki; Kazuo Shinozaki; Shigeyuki Yokoyama
Solution structure of the major DNA-binding domain of Arabidopsis thaliana ethylene-insensitive3-like3.
Journal of molecular biology 2005;348(2):253-64.
2005: Anna Scott; David Pantoja-Uceda; Seizo Koshiba; Makoto Inoue; Takanori Kigawa; Takaho Terada; Mikako Shirouzu; Akiko Tanaka; Sumio Sugano; Shigeyuki Yokoyama; Peter Güntert
Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.
Journal of biomolecular NMR 2005;31(4):357-61.
2005: Kazuki Kurimoto; Yutaka Muto; Naomi Obayashi; Takaho Terada; Mikako Shirouzu; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Takanori Kigawa; Hiromi Okumura; Akiko Tanaka; Norito Shibata; Maki Kashikawa; Kiyokazu Agata; Shigeyuki Yokoyama
Crystal structure of the N-terminal RecA-like domain of a DEAD-box RNA helicase, the Dugesia japonica vasa-like gene B protein.
Journal of structural biology 2005;150(1):58-68.
2005: Kazuhiko Yamasaki; Takanori Kigawa; Makoto Inoue; Masaru Tateno; Tomoko Yamasaki; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Yasuko Tomo; Nobuhiro Hayami; Takaho Terada; Mikako Shirouzu; Akiko Tanaka; Motoaki Seki; Kazuo Shinozaki; Shigeyuki Yokoyama
Solution structure of an Arabidopsis WRKY DNA binding domain.
The Plant cell 2005;17(3):944-56.
2005: Nobukazu Nameki; Naoya Tochio; Seizo Koshiba; Makoto Inoue; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Yukiko Fujikura; Miyuki Saito; Masaomi Ikari; Megumi Watanabe; Takaho Terada; Mikako Shirouzu; Mayumi Yoshida; Hiroshi Hirota; Akiko Tanaka; Yoshihide Hayashizaki; Peter Güntert; Takanori Kigawa; Shigeyuki Yokoyama
Solution structure of the PWWP domain of the hepatoma-derived growth factor family.
Protein science : a publication of the Protein Society 2005;14(3):756-64.
2005: Balasundaram Padmanabhan; Maria Scharlock; Kit I Tong; Yoshihiro Nakamura; MOON-IL KANG; Akira Kobayashi; Takehisa Matsumoto; Akiko Tanaka; Masayuki Yamamoto; Shigeyuki Yokoyama
Purification, crystallization and preliminary X-ray diffraction analysis of the Kelch-like motif region of mouse Keap1.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 1):153-5.
2005: David Pantoja-Uceda; Blanca López-Méndez; Seizo Koshiba; Makoto Inoue; Takanori Kigawa; Takaho Terada; Mikako Shirouzu; Akiko Tanaka; Motoaki Seki; Kazuo Shinozaki; Shigeyuki Yokoyama; Peter Güntert
Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana.
Protein science : a publication of the Protein Society 2005;14(1):224-30.
2004: Anna Scott; David Pantoja-Uceda; Seizo Koshiba; Makoto Inoue; Takanori Kigawa; Takaho Terada; Mikako Shirouzu; Akiko Tanaka; Sumio Sugano; Shigeyuki Yokoyama; Peter Güntert
NMR assignment of the SH2 domain from the human feline sarcoma oncogene FES.
Journal of biomolecular NMR 2004;30(4):463-4.
2004: Kazuhiko Yamasaki; Takanori Kigawa; Makoto Inoue; Masaru Tateno; Tomoko Yamasaki; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Yasuko Tomo; Nobuhiro Hayami; Takaho Terada; Mikako Shirouzu; Takashi Osanai; Akiko Tanaka; Motoaki Seki; Kazuo Shinozaki; Shigeyuki Yokoyama
Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1.
The Plant cell 2004;16(12):3448-59.
2004: Kohei Saito; Takanori Kigawa; Seizo Koshiba; Kazuo Sato; Yo Matsuo; Ayako Sakamoto; Tetsuo Takagi; Mikako Shirouzu; Takashi Yabuki; Emi Nunokawa; Eiko Seki; Takayoshi Matsuda; Masaaki Aoki; Yukako Miyata; Noriko Hirakawa; Makoto Inoue; Takaho Terada; Takahiro Nagase; Reiko Kikuno; Manabu Nakayama; Osamu Ohara; Akiko Tanaka; Shigeyuki Yokoyama
The CAP-Gly domain of CYLD associates with the proline-rich sequence in NEMO/IKKgamma.
Structure (London, England : 1993) 2004;12(9):1719-28.
2004: Nobukazu Nameki; Misao Yoneyama; Seizo Koshiba; Naoya Tochio; Makoto Inoue; Eiko Seki; Takayoshi Matsuda; Yasuko Tomo; Takushi Harada; Kohei Saito; Naohiro Kobayashi; Takashi Yabuki; Masaaki Aoki; Emi Nunokawa; Natsuko Matsuda; Noriko Sakagami; Takaho Terada; Mikako Shirouzu; Mayumi Yoshida; Hiroshi Hirota; Takashi Osanai; Akiko Tanaka; Takahiro Arakawa; piero carninci; Jun Kawai; Yoshihide Hayashizaki; Kengo Kinoshita; Peter Güntert; Takanori Kigawa; Shigeyuki Yokoyama
Solution structure of the RWD domain of the mouse GCN2 protein.
Protein science : a publication of the Protein Society 2004;13(8):2089-100.
2004: David Pantoja-Uceda; Blanca López-Méndez; Seizo Koshiba; Takanori Kigawa; Mikako Shirouzu; Takaho Terada; Makoto Inoue; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Hiroshi Hirota; Mayumi Yoshida; Akiko Tanaka; Takashi Osanai; Motoaki Seki; Kazuo Shinozaki; Shigeyuki Yokoyama; Peter Güntert
NMR assignment of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana.
Journal of biomolecular NMR 2004;29(2):207-8.
2004: Blanca López-Méndez; David Pantoja-Uceda; Tadashi Tomizawa; Seizo Koshiba; Takanori Kigawa; Mikako Shirouzu; Takaho Terada; Makoto Inoue; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Hiroshi Hirota; Mayumi Yoshida; Akiko Tanaka; Takashi Osanai; Motoaki Seki; Kazuo Shinozaki; Shigeyuki Yokoyama; Peter Güntert
NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana.
Journal of biomolecular NMR 2004;29(2):205-6.
2004: Kazuhiko Yamasaki; Takanori Kigawa; Makoto Inoue; Masaru Tateno; Tomoko Yamasaki; Takashi Yabuki; Masaaki Aoki; Eiko Seki; Takayoshi Matsuda; Emi Nunokawa; Yoshiko Ishizuka; Takaho Terada; Mikako Shirouzu; Takashi Osanai; Akiko Tanaka; Motoaki Seki; Kazuo Shinozaki; Shigeyuki Yokoyama
A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors.
Journal of molecular biology 2004;337(1):49-63.