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Matthew Thomas

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Stewart T Chang; Richard R Green; Robert E Palermo; Pavel Sova; Matthew J Thomas; Michael G Katze
Next-generation sequencing of small RNAs from HIV-infected cells identifies phased microrna expression patterns and candidate novel microRNAs differentially expressed upon infection.
Xinxia Peng; Sean C Proll; Gary P Schroth; Matthew J Thomas; Jennifer R Tisoncik; Terrence M Tumpey; Ralph S Baric; Martin T Ferris; Matthew Frieman; Lisa Gralinski; Mark Heise; Yoshihiro Kawaoka; Marcus J Korth; Chengjun Li; Shujun Luo; Michael G Katze
Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection.
Carole R Baskin; Helle Bielefeldt-Ohmann; Adolfo García-Sastre; Terrence M Tumpey; Neal Van Hoeven; Victoria S Carter; Matthew J Thomas; Sean C Proll; Alicia Solórzano; R Billharz; Jamie L Fornek; S Thomas; C-H Chen; E A Clark; Kaja Murali-Krishna; Michael G Katze
Functional genomic and serological analysis of the protective immune response resulting from vaccination of macaques with an NS1-truncated influenza virus.

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All Publications

2013: Stewart T Chang; Richard R Green; Robert E Palermo; Pavel Sova; Matthew J Thomas; Michael G Katze
Next-generation sequencing of small RNAs from HIV-infected cells identifies phased microrna expression patterns and candidate novel microRNAs differentially expressed upon infection.
mBio 2013;4(1):e00549-12.
2011: Xinxia Peng; Sean C Proll; Gary P Schroth; Matthew J Thomas; Jennifer R Tisoncik; Terrence M Tumpey; Ralph S Baric; Martin T Ferris; Matthew Frieman; Lisa Gralinski; Mark Heise; Yoshihiro Kawaoka; Marcus J Korth; Chengjun Li; Shujun Luo; Michael G Katze
Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection.
mBio 2011;2(6):.
2007: Carole R Baskin; Helle Bielefeldt-Ohmann; Adolfo García-Sastre; Terrence M Tumpey; Neal Van Hoeven; Victoria S Carter; Matthew J Thomas; Sean C Proll; Alicia Solórzano; R Billharz; Jamie L Fornek; S Thomas; C-H Chen; E A Clark; Kaja Murali-Krishna; Michael G Katze
Functional genomic and serological analysis of the protective immune response resulting from vaccination of macaques with an NS1-truncated influenza virus.
Journal of virology 2007;81(21):11817-27.
2007: Alan G Goodman; Jennifer A Smith; Siddharth Balachandran; Olivia Perwitasari; Sean C Proll; Matthew J Thomas; Marcus J Korth; Glen N Barber; Leslie A Schiff; Michael G Katze
The cellular protein P58IPK regulates influenza virus mRNA translation and replication through a PKR-mediated mechanism.
Journal of virology 2007;81(5):2221-30.
2007: James C Wallace; Marcus J Korth; Bryan Paeper; Sean C Proll; Matthew J Thomas; Charles L Magness; Shawn P Iadonato; Charles Nelson; Michael G Katze
High-density rhesus macaque oligonucleotide microarray design using early-stage rhesus genome sequence information and human genome annotations.
BMC genomics 2007;8():28.
2006: Tracey Baas; Carole R Baskin; Deborah L Diamond; Adolfo García-Sastre; Helle Bielefeldt-Ohmann; Terrence M Tumpey; Matthew J Thomas; Victoria S Carter; Thomas H Teal; Neal Van Hoeven; Sean C Proll; Jon M Jacobs; Z R Caldwell; Marina A Gritsenko; Renee R Hukkanen; David G Camp; Richard D Smith; Michael G Katze
Integrated molecular signature of disease: analysis of influenza virus-infected macaques through functional genomics and proteomics.
Journal of virology 2006;80(21):10813-28.
2006: John C Kash; Terrence M Tumpey; Sean C Proll; Victoria S Carter; Olivia Perwitasari; Matthew J Thomas; Christopher F Basler; Peter Palese; Jeffery Taubenberger; Adolfo García-Sastre; David E Swayne; Michael G Katze
Genomic analysis of increased host immune and cell death responses induced by 1918 influenza virus.
Nature 2006;443(7111):578-81.
2006: Jeffrey O Langland; John C Kash; Victoria S Carter; Matthew J Thomas; Michael G Katze; Bertram L Jacobs
Suppression of proinflammatory signal transduction and gene expression by the dual nucleic acid binding domains of the vaccinia virus E3L proteins.
Journal of virology 2006;80(20):10083-95.
2006: Kathie-Anne Walters; Maria W Smith; Sampa Pal; Jill C Thompson; Matthew J Thomas; Matthew M Yeh; David L Thomas; Matthew Fitzgibbon; Sean C Proll; Nelson Fausto; David R Gretch; Robert L Carithers; Margaret C Shuhart; Michael G Katze
Identification of a specific gene expression pattern associated with HCV-induced pathogenesis in HCV- and HCV/HIV-infected individuals.
Virology 2006;350(2):453-64.
2006: Matthew J Thomas; Leon R Flanary; Bruce A Brown; Michael G Katze; Carole R Baskin
Use of human nasal cannulas during bronchoscopy procedures as a simple method for maintaining adequate oxygen saturation in pigtailed macaques (Macaca nemestrina).
Journal of the American Association for Laboratory Animal Science : JAALAS 2006;45(4):44-8.
2006: Matthew J Thomas; Michael B Agy; Sean C Proll; Bryan Paeper; Yu Li; Kara L Jensen; Marcus J Korth; Michael G Katze
Functional gene analysis of individual response to challenge of SIVmac239 in M. mulatta PBMC culture.
Virology 2006;348(1):242-52.
2006: John C Kash; Elke Mühlberger; Victoria S Carter; Melanie Grosch; Olivia Perwitasari; Sean C Proll; Matthew J Thomas; Friedemann Weber; Hans-Dieter Klenk; Michael G Katze
Global suppression of the host antiviral response by Ebola- and Marburgviruses: increased antagonism of the type I interferon response is associated with enhanced virulence.
Journal of virology 2006;80(6):3009-20.
2005: Charles L Magness; P Campion Fellin; Matthew J Thomas; Marcus J Korth; Michael B Agy; Sean C Proll; Matthew Fitzgibbon; Christina A Scherer; Douglas G Miner; Michael G Katze; Shawn P Iadonato
Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human.
Genome biology 2005;6(7):R60.