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Kenneth Timmis

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Panagiota-Myrsini Chronopoulou; Frédéric Coulon; Robert Duran; Anne Fahy; Marisol Goñi-Urriza; Tracy Lawson; Boyd A McKew; Sandrine Païssé; Louis Peperzak; Kenneth N Timmis; Graham J C Underwood; Laura Acuña Alvarez; Terry J McGenity
Impact of a simulated oil spill on benthic phototrophs and nitrogen-fixing bacteria in mudflat mesocosms.
Frédéric Coulon; Robert Duran; Anne Fahy; Marisol Goñi-Urriza; Boyd A McKew; Sandrine Païssé; Louis Peperzak; Kenneth N Timmis; Graham J C Underwood; Laura Acuña Alvarez; Corina P D Brussaard; Panagiota-Myrsini Chronopoulou; Terry J McGenity
Central role of dynamic tidal biofilms dominated by aerobic hydrocarbonoclastic bacteria and diatoms in the biodegradation of hydrocarbons in coastal mudflats.
M Bassas-Galia; Balbina Nogales; M Rohde; Kenneth N Timmis; S Arias; G Molinari
Plant original Massilia isolates producing polyhydroxybutyrate, including one exhibiting high yields from glycerol.

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All Publications

2013: Panagiota-Myrsini Chronopoulou; Frédéric Coulon; Robert Duran; Anne Fahy; Marisol Goñi-Urriza; Tracy Lawson; Boyd A McKew; Sandrine Païssé; Louis Peperzak; Kenneth N Timmis; Graham J C Underwood; Laura Acuña Alvarez; Terry J McGenity
Impact of a simulated oil spill on benthic phototrophs and nitrogen-fixing bacteria in mudflat mesocosms.
Environmental microbiology 2013;15(1):242-52.
2012: Frédéric Coulon; Robert Duran; Anne Fahy; Marisol Goñi-Urriza; Boyd A McKew; Sandrine Païssé; Louis Peperzak; Kenneth N Timmis; Graham J C Underwood; Laura Acuña Alvarez; Corina P D Brussaard; Panagiota-Myrsini Chronopoulou; Terry J McGenity
Central role of dynamic tidal biofilms dominated by aerobic hydrocarbonoclastic bacteria and diatoms in the biodegradation of hydrocarbons in coastal mudflats.
Applied and environmental microbiology 2012;78(10):3638-48.
2012: M Bassas-Galia; Balbina Nogales; M Rohde; Kenneth N Timmis; S Arias; G Molinari
Plant original Massilia isolates producing polyhydroxybutyrate, including one exhibiting high yields from glycerol.
Journal of applied microbiology 2012;112(3):443-54.
2011: Julia S Sabirova; Kenneth N Timmis; Anke Becker; Heinrich Lünsdorf; Jean-Marc Nicaud; Peter N Golyshin
Transcriptional profiling of the marine oil-degrading bacterium Alcanivorax borkumensis during growth on n-alkanes.
FEMS microbiology letters 2011;319(2):160-8.
2011: Thorben Dammeyer; Miriam Steinwand; Sarah-C Krüger; Stefan Dübel; Michael Hust; Kenneth N Timmis
Efficient production of soluble recombinant single chain Fv fragments by a Pseudomonas putida strain KT2440 cell factory.
Microbial cell factories 2011;10():11.
2010: Ana Beloqui; María-Eugenia Guazzaroni; Florencio Pazos; José M Vieites; Marta Godoy; Olga V Golyshina; Tatyana N Chernikova; Agnes Waliczek; Rafael Silva-Rocha; Yamal Al-Ramahi; Violetta La Cono; Carmen Mendez; José A Salas; Roberto Solano; Michail M Yakimov; Kenneth N Timmis; Peter N Golyshin; Manuel Ferrer
Retraction.
Science (New York, N.Y.) 2010;330(6006):912.
2010: Ana Beloqui; Julio Polaina; José María Vieites; Dolores Reyes-Duarte; Rodrigo Torres; Olga V Golyshina; Tatyana N Chernikova; Agnes Waliczek; Amir Aharoni; Michail M Yakimov; Kenneth N Timmis; Peter N Golyshin; Manuel Ferrer
Novel hybrid esterase-haloacid dehalogenase enzyme.
Chembiochem : a European journal of chemical biology 2010;11(14):1975-8.
2010: Andrew P A Oxley; Mariana P Lanfranconi; Dieco Würdemann; Stephan Ott; Stefan Schreiber; Terry J McGenity; Kenneth N Timmis; Balbina Nogales
Halophilic archaea in the human intestinal mucosa.
Environmental microbiology 2010;12(9):2398-410.
2010: Taras Y Nechitaylo; Michail M Yakimov; Miguel Godinho; Kenneth N Timmis; Elena Belogolova; Boris A Byzov; Alexander V Kurakov; David L Jones; Peter N Golyshin
Effect of the earthworms Lumbricus terrestris and Aporrectodea caliginosa on bacterial diversity in soil.
Microbial ecology 2010;59(3):574-87.
2009: Laura Acuña Alvarez; Daniel A Exton; Kenneth N Timmis; David J Suggett; Terry J McGenity
Characterization of marine isoprene-degrading communities.
Environmental microbiology 2009;11(12):3280-91.
2009: Olga V Golyshina; Michail M Yakimov; Heinrich Lünsdorf; Manuel Ferrer; Manfred Nimtz; Kenneth N Timmis; Victor Wray; Brian J Tindall; Peter N Golyshin
Acidiplasma aeolicum gen. nov., sp. nov., a euryarchaeon of the family Ferroplasmaceae isolated from a hydrothermal pool, and transfer of Ferroplasma cupricumulans to Acidiplasma cupricumulans comb. nov.
International journal of systematic and evolutionary microbiology 2009;59(Pt 11):2815-23.
2009: Ana Beloqui; María-Eugenia Guazzaroni; Florencio Pazos; José M Vieites; Marta Godoy; Olga V Golyshina; Tatyana N Chernikova; Agnes Waliczek; Rafael Silva-Rocha; Yamal Al-Ramahi; Violetta La Cono; Carmen Mendez; José A Salas; Roberto Solano; Michail M Yakimov; Kenneth N Timmis; Peter N Golyshin; Manuel Ferrer
Reactome array: forging a link between metabolome and genome.
Science (New York, N.Y.) 2009;326(5950):252-7.
2009: Christoph Gertler; Gunnar Gerdts; Kenneth N Timmis; Peter N Golyshin
Microbial consortia in mesocosm bioremediation trial using oil sorbents, slow-release fertilizer and bioaugmentation.
FEMS microbiology ecology 2009;69(2):288-300.
2009: C Gertler; G Gerdts; Kenneth N Timmis; Michail M Yakimov; Peter N Golyshin
Populations of heavy fuel oil-degrading marine microbial community in presence of oil sorbent materials.
Journal of applied microbiology 2009;107(2):590-605.
2009: Dieco Würdemann; Brian J Tindall; Rüdiger Pukall; Heinrich Lünsdorf; Carsten Strömpl; Theresa Namuth; Hannes Nahrstedt; Melissa Wos-Oxley; Stephan Ott; Stefan Schreiber; Kenneth N Timmis; Andrew P A Oxley
Gordonibacter pamelaeae gen. nov., sp. nov., a new member of the Coriobacteriaceae isolated from a patient with Crohn's disease, and reclassification of Eggerthella hongkongensis Lau et al. 2006 as Paraeggerthella hongkongensis gen. nov., comb. nov.
International journal of systematic and evolutionary microbiology 2009;59(Pt 6):1405-15.
2009: Taras Y Nechitaylo; Kenneth N Timmis; Peter N Golyshin
'Candidatus Lumbricincola', a novel lineage of uncultured Mollicutes from earthworms of family Lumbricidae.
Environmental microbiology 2009;11(4):1016-26.
2009: Roberto A Bobadilla Fazzini; Agata Bielecka; Ana K Poucas Quintas; Peter N Golyshin; Maria J Preto; Kenneth N Timmis; Vitor A P Martins dos Santos
Bacterial consortium proteomics under 4-chlorosalicylate carbon-limiting conditions.
Proteomics 2009;9(8):2273-85.
2009: A Aburto; A Fahy; Frédéric Coulon; G Lethbridge; Kenneth N Timmis; Andrew S Ball; Terry J McGenity
Mixed aerobic and anaerobic microbial communities in benzene-contaminated groundwater.
Journal of applied microbiology 2009;106(1):317-28.
2008: Jacek Puchałka; Matthew A Oberhardt; Miguel Godinho; Agata Bielecka; Daniela Regenhardt; Kenneth N Timmis; Jason A Papin; Vítor A P Martins Dos Santos
Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology.
PLoS computational biology 2008;4(10):e1000210.
2008: Anne Fahy; Andrew S Ball; Gordon Lethbridge; Terry J McGenity; Kenneth N Timmis
High benzene concentrations can favour Gram-positive bacteria in groundwaters from a contaminated aquifer.
FEMS microbiology ecology 2008;65(3):526-33.
2008: Julia S Sabirova; Tatyana N Chernikova; Kenneth N Timmis; Peter N Golyshin
Niche-specificity factors of a marine oil-degrading bacterium Alcanivorax borkumensis SK2.
FEMS microbiology letters 2008;285(1):89-96.
2008: Manuel Ferrer; Olga V Golyshina; Ana Beloqui; Lars H Böttger; José M Andreu; Julio Polaina; Antonio L De Lacey; Alfred X Trautwein; Kenneth N Timmis; Peter N Golyshin
A purple acidophilic di-ferric DNA ligase from Ferroplasma.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(26):8878-83.
2008: A Fahy; Andrew S Ball; G Lethbridge; Kenneth N Timmis; Terry J McGenity
Isolation of alkali-tolerant benzene-degrading bacteria from a contaminated aquifer.
Letters in applied microbiology 2008;47(1):60-6.
2008: Andrea M Sass; Boyd A McKew; Henrik Sass; Jörg Fichtel; Kenneth N Timmis; Terry J McGenity
Diversity of Bacillus-like organisms isolated from deep-sea hypersaline anoxic sediments.
Saline systems 2008;4():8.
2007: Michail M Yakimov; Violetta La Cono; Renata Denaro; Giuseppe D'Auria; Franco Decembrini; Kenneth N Timmis; Peter N Golyshin; Laura Giuliano
Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea.
The ISME journal 2007;1(8):743-55.
2007: Hyun-Soo Kim; Peter N Golyshin; Kenneth N Timmis
Characterization and role of a metalloprotease induced by chitin in Serratia sp. KCK.
Journal of industrial microbiology & biotechnology 2007;34(11):715-21.
2007: Alexandre J Macedo; Kenneth N Timmis; Wolf-Rainer Abraham
Widespread capacity to metabolize polychlorinated biphenyls by diverse microbial communities in soils with no significant exposure to PCB contamination.
Environmental microbiology 2007;9(8):1890-7.
2007: Hyun-Soo Kim; Kenneth N Timmis; Peter N Golyshin
Characterization of a chitinolytic enzyme from Serratia sp. KCK isolated from kimchi juice.
Applied microbiology and biotechnology 2007;75(6):1275-83.
2007: Hendrik Ballerstedt; Rita J M Volkers; Astrid E Mars; John E Hallsworth; Vitor A Martins dos Santos; Jaçek Puchalka; Joost van Duuren; Gerrit Eggink; Kenneth N Timmis; Jan A M de Bont; Jan Wery
Genomotyping of Pseudomonas putida strains using P. putida KT2440-based high-density DNA microarrays: implications for transcriptomics studies.
Applied microbiology and biotechnology 2007;75(5):1133-42.
2007: Boyd A McKew; Frédéric Coulon; Michail M Yakimov; Renata Denaro; Maria Genovese; Cindy J Smith; A Mark Osborn; Kenneth N Timmis; Terry J McGenity
Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria.
Environmental microbiology 2007;9(6):1562-71.
2007: Oleg R Kotsyurbenko; Michael W Friedrich; Maria V Simankova; Alla N Nozhevnikova; Peter N Golyshin; Kenneth N Timmis; Ralf Conrad
shift from acetoclastic to H2-dependent methanogenesis in a west Siberian peat bog at low pH values and isolation of an acidophilic Methanobacterium strain.
Applied and environmental microbiology 2007;73(7):2344-8.
2007: John E Hallsworth; Michail M Yakimov; Peter N Golyshin; Jenny L M Gillion; Giuseppe D'Auria; Flavia de Lima Alves; Violetta La Cono; Maria Genovese; Boyd A McKew; Sandra L Hayes; Gayle Harris; Laura Giuliano; Kenneth N Timmis; Terry J McGenity
Limits of life in MgCl2-containing environments: chaotropicity defines the window.
Environmental microbiology 2007;9(3):801-13.
2007: Manuel Ferrer; Ana Beloqui; Olga V Golyshina; Francisco J Plou; Alexander Neef; Tatyana N Chernikova; Lucia Fernández-Arrojo; Iraj Ghazi; Antonio Ballesteros; Kieran Elborough; Kenneth N Timmis; Peter N Golyshin
Biochemical and structural features of a novel cyclodextrinase from cow rumen metagenome.
Biotechnology journal 2007;2(2):207-13.
2007: Rainer Kalscheuer; Tim Stöveken; Ursula Malkus; Rudolf Reichelt; Peter N Golyshin; Julia S Sabirova; Manuel Ferrer; Kenneth N Timmis; Alexander Steinbüchel
Analysis of storage lipid accumulation in Alcanivorax borkumensis: Evidence for alternative triacylglycerol biosynthesis routes in bacteria.
Journal of bacteriology 2007;189(3):918-28.
2007: Amit N Khachane; Kenneth N Timmis; Vítor A P Martins Dos Santos
Dynamics of reductive genome evolution in mitochondria and obligate intracellular microbes.
Molecular biology and evolution 2007;24(2):449-56.
2007: Manuel Ferrer; Olga V Golyshina; Ana Beloqui; Peter N Golyshin; Kenneth N Timmis
The cellular machinery of Ferroplasma acidiphilum is iron-protein-dominated.
Nature 2007;445(7123):91-4.
2007: Frédéric Coulon; Boyd A McKew; A Mark Osborn; Terry J McGenity; Kenneth N Timmis
Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters.
Environmental microbiology 2007;9(1):177-86.
2007: Boyd A McKew; Frédéric Coulon; A Mark Osborn; Kenneth N Timmis; Terry J McGenity
Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK.
Environmental microbiology 2007;9(1):165-76.
2006: Julia S Sabirova; Manuel Ferrer; Heinrich Lünsdorf; Victor Wray; Rainer Kalscheuer; Alexander Steinbüchel; Kenneth N Timmis; Peter N Golyshin
Mutation in a "tesB-like" hydroxyacyl-coenzyme A-specific thioesterase gene causes hyperproduction of extracellular polyhydroxyalkanoates by Alcanivorax borkumensis SK2.
Journal of bacteriology 2006;188(24):8452-9.
2006: Anne Fahy; Terry J McGenity; Kenneth N Timmis; Andrew S Ball
Heterogeneous aerobic benzene-degrading communities in oxygen-depleted groundwaters.
FEMS microbiology ecology 2006;58(2):260-70.
2006: Ana Beloqui; Marcos Pita; Julio Polaina; Arturo Martínez-Arias; Olga V Golyshina; Miren Zumárraga; Michail M Yakimov; Humberto García-Arellano; Miguel Alcalde; Víctor M Fernández; Kieran Elborough; José M Andreu; Antonio Ballesteros; Francisco J Plou; Kenneth N Timmis; Manuel Ferrer; Peter N Golyshin
Novel polyphenol oxidase mined from a metagenome expression library of bovine rumen: biochemical properties, structural analysis, and phylogenetic relationships.
The Journal of biological chemistry 2006;281(32):22933-42.
2006: Susanne Schneiker; Vítor A P Martins Dos Santos; Daniela Bartels; Thomas Bekel; Martina Brecht; Jens Buhrmester; Tatyana N Chernikova; Renata Denaro; Manuel Ferrer; Christoph Gertler; Alexander Goesmann; Olga V Golyshina; Filip Kaminski; Amit N Khachane; Siegmund Lang; Burkhard Linke; Alice C McHardy; Folker Meyer; Taras Nechitaylo; Alfred Pühler; Daniela Regenhardt; Oliver Rupp; Julia S Sabirova; Werner Selbitschka; Michail M Yakimov; Kenneth N Timmis; Frank-Jörg Vorhölter; Stefan Weidner; Olaf Kaiser; Peter N Golyshin
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.
Nature biotechnology 2006;24(8):997-1004.
2006: Julia S Sabirova; Manuel Ferrer; Daniela Regenhardt; Kenneth N Timmis; Peter N Golyshin
Proteomic insights into metabolic adaptations in Alcanivorax borkumensis induced by alkane utilization.
Journal of bacteriology 2006;188(11):3763-73.
2006: Magally Romero-Tabarez; Rolf Jansen; Marita Sylla; Heinrich Lünsdorf; Susanne Häussler; Dwi A Santosa; Kenneth N Timmis; Gabriella Molinari
7-O-malonyl macrolactin A, a new macrolactin antibiotic from Bacillus subtilis active against methicillin-resistant Staphylococcus aureus, vancomycin-resistant enterococci, and a small-colony variant of Burkholderia cepacia.
Antimicrobial agents and chemotherapy 2006;50(5):1701-9.
2006: Olga V Golyshina; Peter N Golyshin; Kenneth N Timmis; Manuel Ferrer
The 'pH optimum anomaly' of intracellular enzymes of Ferroplasma acidiphilum.
Environmental microbiology 2006;8(3):416-25.
2006: Massimo Strocchi; Manuel Ferrer; Kenneth N Timmis; Peter N Golyshin
Low temperature-induced systems failure in Escherichia coli: insights from rescue by cold-adapted chaperones.
Proteomics 2006;6(1):193-206.
2005: Manuel Ferrer; Olga V Golyshina; Tatyana N Chernikova; Amit N Khachane; Dolores Reyes-Duarte; Vitor A P Martins Dos Santos; Carsten Strompl; Kieran Elborough; Graeme Jarvis; Alexander Neef; Michail M Yakimov; Kenneth N Timmis; Peter N Golyshin
Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora.
Environmental microbiology 2005;7(12):1996-2010.
2005: Kenneth N Timmis
Golden age of drug discovery or dark age of missed chances?
Environmental microbiology 2005;7(12):1861-3.
2005: Dolores Reyes-Duarte; Julio Polaina; Nieves López-Cortés; Miguel Alcalde; Francisco J Plou; Kieran Elborough; Antonio Ballesteros; Kenneth N Timmis; Peter N Golyshin; Manuel Ferrer
Conversion of a carboxylesterase into a triacylglycerol lipase by a random mutation.
Angewandte Chemie (International ed. in English) 2005;44(46):7553-7.
2005: Alexandre J Macedo; Ute Kuhlicke; Thomas Neu; Kenneth N Timmis; Wolf-Rainer Abraham
Three stages of a biofilm community developing at the liquid-liquid interface between polychlorinated biphenyls and water.
Applied and environmental microbiology 2005;71(11):7301-9.
2005: Manuel Ferrer; Olga V Golyshina; Francisco J Plou; Kenneth N Timmis; Peter N Golyshin
A novel alpha-glucosidase from the acidophilic archaeon Ferroplasma acidiphilum strain Y with high transglycosylation activity and an unusual catalytic nucleophile.
The Biochemical journal 2005;391(Pt 2):269-76.
2005: Michail M Yakimov; Renata Denaro; Maria Genovese; Simone Cappello; Giuseppe D'Auria; Tatyana N Chernikova; Kenneth N Timmis; Peter N Golyshin; Laura Giluliano
Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons.
Environmental microbiology 2005;7(9):1426-41.
2005: Olga V Golyshina; Kenneth N Timmis
Ferroplasma and relatives, recently discovered cell wall-lacking archaea making a living in extremely acid, heavy metal-rich environments.
Environmental microbiology 2005;7(9):1277-88.
2005: Manuel Ferrer; Olga V Golyshina; Tatyana N Chernikova; Amit N Khachane; Vítor A P Martins Dos Santos; Michail M Yakimov; Kenneth N Timmis; Peter N Golyshin
Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin.
Chemistry & biology 2005;12(8):895-904.
2005: Anne Fahy; Gordon Lethbridge; Richard Earle; Andrew S Ball; Kenneth N Timmis; Terry J McGenity
Effects of long-term benzene pollution on bacterial diversity and community structure in groundwater.
Environmental microbiology 2005;7(8):1192-9.
2005: Stefanie Tillmann; Carsten Strömpl; Kenneth N Timmis; Wolf-Rainer Abraham
Stable isotope probing reveals the dominant role of Burkholderia species in aerobic degradation of PCBs.
FEMS microbiology ecology 2005;52(2):207-17.
2005: Paul W J J van der Wielen; Henk Bolhuis; Sara Borin; Daniele Daffonchio; Cesare Corselli; Laura Giuliano; Giuseppe D'Auria; Gert J de Lange; Andreas Huebner; Sotirios P Varnavas; John Thomson; Christian Tamburini; Danielle Marty; Terry J McGenity; Kenneth N Timmis
The enigma of prokaryotic life in deep hypersaline anoxic basins.
Science (New York, N.Y.) 2005;307(5706):121-3.
2005: Amit N Khachane; Kenneth N Timmis; Vítor A P Martins dos Santos
Uracil content of 16S rRNA of thermophilic and psychrophilic prokaryotes correlates inversely with their optimal growth temperatures.
Nucleic acids research 2005;33(13):4016-22.
2004: V A P Martins Dos Santos; S Heim; Edward R B Moore; M Strätz; Kenneth N Timmis
Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440.
Environmental microbiology 2004;6(12):1264-86.
2004: Manuel Ferrer; Tatyana N Chernikova; Kenneth N Timmis; Peter N Golyshin
Expression of a temperature-sensitive esterase in a novel chaperone-based Escherichia coli strain.
Applied and environmental microbiology 2004;70(8):4499-504.
2004: Manuel Ferrer; Heinrich Lünsdorf; Tatyana N Chernikova; Michail M Yakimov; Kenneth N Timmis; Peter N Golyshin
Functional consequences of single:double ring transitions in chaperonins: life in the cold.
Molecular microbiology 2004;53(1):167-82.
2004: Kevin J Purdy; T D Cresswell-Maynard; David B Nedwell; Terry J McGenity; William D Grant; Kenneth N Timmis; T Martin Embley
Isolation of haloarchaea that grow at low salinities.
Environmental microbiology 2004;6(6):591-5.
2004: Michail M Yakimov; Laura Giuliano; Renata Denaro; Ermanno Crisafi; Tatyana N Chernikova; Wolf-Rainer Abraham; Heinrich Luensdorf; Kenneth N Timmis; Peter N Golyshin
Thalassolituus oleivorans gen. nov., sp. nov., a novel marine bacterium that obligately utilizes hydrocarbons.
International journal of systematic and evolutionary microbiology 2004;54(Pt 1):141-8.
2003: Peter N Golyshin; Vítor A P Martins Dos Santos; Olaf Kaiser; Manuel Ferrer; Yulia S Sabirova; Heinrich Lünsdorf; Tatyana N Chernikova; Olga V Golyshina; Michail M Yakimov; Alfred Pühler; Kenneth N Timmis
Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems.
Journal of biotechnology 2003;106(2-3):215-20.
2003: John E Hallsworth; Bernard A Prior; Yoshiyuki Nomura; Masayoshi Iwahara; Kenneth N Timmis
Compatible solutes protect against chaotrope (ethanol)-induced, nonosmotic water stress.
Applied and environmental microbiology 2003;69(12):7032-4.
2003: John E Hallsworth; Sabina Heim; Kenneth N Timmis
Chaotropic solutes cause water stress in Pseudomonas putida.
Environmental microbiology 2003;5(12):1270-80.
2003: S Heim; Manuel Ferrer; Holger Heuer; Daniela Regenhardt; Manfred Nimtz; Kenneth N Timmis
Proteome reference map of Pseudomonas putida strain KT2440 for genome expression profiling: distinct responses of KT2440 and Pseudomonas aeruginosa strain PAO1 to iron deprivation and a new form of superoxide dismutase.
Environmental microbiology 2003;5(12):1257-69.
2003: Carsten Strömpl; Georgina L Hold; Heinrich Lünsdorf; Jennifer Graham; Susan Gallacher; Wolf-Rainer Abraham; Edward R B Moore; Kenneth N Timmis
Oceanicaulis alexandrii gen. nov., sp. nov., a novel stalked bacterium isolated from a culture of the dinoflagellate Alexandrium tamarense (Lebour) Balech.
International journal of systematic and evolutionary microbiology 2003;53(Pt 6):1901-6.
2003: Manuel Ferrer; Tatyana N Chernikova; Michail M Yakimov; Peter N Golyshin; Kenneth N Timmis
Chaperonins govern growth of Escherichia coli at low temperatures.
Nature biotechnology 2003;21(11):1266-7.
2003: Dirk F Wenderoth; Björn Ferslev; Giampiero Macarri; Gabriella Molinari; Heinrich Lünsdorf; Kenneth N Timmis
Leitbakteria of microbial biofilm communities causing occlusion of biliary stents.
Environmental microbiology 2003;5(10):859-66.
2003: Michail M Yakimov; Laura Giuliano; Gabriella Gentile; Ermanno Crisafi; Tatyana N Chernikova; Wolf-Rainer Abraham; Heinrich Lünsdorf; Kenneth N Timmis; Peter N Golyshin
Oleispira antarctica gen. nov., sp. nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water.
International journal of systematic and evolutionary microbiology 2003;53(Pt 3):779-85.
2003: David B McKay; Matthias Prucha; Walter Reineke; Kenneth N Timmis; Dietmar H Pieper
Substrate specificity and expression of three 2,3-dihydroxybiphenyl 1,2-dioxygenases from Rhodococcus globerulus strain P6.
Journal of bacteriology 2003;185(9):2944-51.
2002: Daniela Regenhardt; Holger Heuer; S Heim; D U Fernandez; Carsten Strömpl; Edward R B Moore; Kenneth N Timmis
Pedigree and taxonomic credentials of Pseudomonas putida strain KT2440.
Environmental microbiology 2002;4(12):912-5.
2002: Balbina Nogales; Kenneth N Timmis; David B Nedwell; A Mark Osborn
Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA.
Applied and environmental microbiology 2002;68(10):5017-25.
2002: Wolf-Rainer Abraham; Balbina Nogales; Peter N Golyshin; Dietmar H Pieper; Kenneth N Timmis
Polychlorinated biphenyl-degrading microbial communities in soils and sediments.
Current opinion in microbiology 2002;5(3):246-53.
2002: Peter N Golyshin; Tatyana N Chernikova; Wolf-Rainer Abraham; Heinrich Lünsdorf; Kenneth N Timmis; Michail M Yakimov
Oleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp. nov., a novel marine bacterium that obligately utilizes hydrocarbons.
International journal of systematic and evolutionary microbiology 2002;52(Pt 3):901-11.
2002: Michail M Yakimov; Laura Giuliano; Ermanno Crisafi; Tatyana N Chernikova; Kenneth N Timmis; Peter N Golyshin
Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy).
Environmental microbiology 2002;4(5):249-56.
2001: Michail M Yakimov; Laura Giuliano; Tatyana N Chernikova; Gabriella Gentile; Wolf-Rainer Abraham; Heinrich Lünsdorf; Kenneth N Timmis; Peter N Golyshin
Alcalilimnicola halodurans gen. nov., sp. nov., an alkaliphilic, moderately halophilic and extremely halotolerant bacterium, isolated from sediments of soda-depositing Lake Natron, East Africa Rift Valley.
International journal of systematic and evolutionary microbiology 2001;51(Pt 6):2133-43.
2001: Michail M Yakimov; Laura Giuliano; Kenneth N Timmis; Peter N Golyshin
Upstream-independent ribosomal RNA amplification analysis (URA): a new approach to characterizing the diversity of natural microbial communities.
Environmental microbiology 2001;3(10):662-6.
2001: F Bartels; S Fernández; A Holtel; Kenneth N Timmis; V de Lorenzo
The essential HupB and HupN proteins of Pseudomonas putida provide redundant and nonspecific DNA-bending functions.
The Journal of biological chemistry 2001;276(20):16641-8.
2001: Balbina Nogales; Edward R B Moore; E Llobet-Brossa; R Rossello-Mora; R Amann; Kenneth N Timmis
Combined use of 16S ribosomal DNA and 16S rRNA to study the bacterial community of polychlorinated biphenyl-polluted soil.
Applied and environmental microbiology 2001;67(4):1874-84.
2001: Heinrich Lünsdorf; Carsten Strömpl; A M Osborn; Antonio Bennasar; Edward R B Moore; Wolf-Rainer Abraham; Kenneth N Timmis
Approach to analyze interactions of microorganisms, hydrophobic substrates, and soil colloids leading to formation of composite biofilms, and to study initial events in microbiogeological processes.
Methods in enzymology 2001;336():317-31.
2000: N Hugo; Christine Meyer; Jean Armengaud; Jacques Gaillard; Kenneth N Timmis; Yves Jouanneau
Characterization of three XylT-like [2Fe-2S] ferredoxins associated with catabolism of cresols or naphthalene: evidence for their involvement in catechol dioxygenase reactivation.
Journal of bacteriology 2000;182(19):5580-5.
2000: Olga V Golyshina; Tatyana A Pivovarova; Grigorii I Karavaiko; T F Kondratéva; Edward R B Moore; Wolf-Rainer Abraham; Heinrich Lünsdorf; Kenneth N Timmis; Michail M Yakimov; Peter N Golyshin
Ferroplasma acidiphilum gen. nov., sp. nov., an acidophilic, autotrophic, ferrous-iron-oxidizing, cell-wall-lacking, mesophilic member of the Ferroplasmaceae fam. nov., comprising a distinct lineage of the Archaea.
International journal of systematic and evolutionary microbiology 2000;50 Pt 3():997-1006.
2000: Heinrich Lünsdorf; R W Erb; Wolf-Rainer Abraham; Kenneth N Timmis
'Clay hutches': a novel interaction between bacteria and clay minerals.
Environmental microbiology 2000;2(2):161-8.
2000: Michail M Yakimov; Laura Giuliano; Kenneth N Timmis; Peter N Golyshin
Recombinant acylheptapeptide lichenysin: high level of production by Bacillus subtilis cells.
Journal of molecular microbiology and biotechnology 2000;2(2):217-24.
2000: Jean Armengaud; Jacques Gaillard; Kenneth N Timmis
A second [2Fe-2S] ferredoxin from Sphingomonas sp. Strain RW1 can function as an electron donor for the dioxin dioxygenase.
Journal of bacteriology 2000;182(8):2238-44.
2000: A M Osborn; Edward R B Moore; Kenneth N Timmis
An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics.
Environmental microbiology 2000;2(1):39-50.
1999: Michael Seeger; Marco Zielinski; Kenneth N Timmis; Bernd Hofer
Regiospecificity of dioxygenation of di- to pentachlorobiphenyls and their degradation to chlorobenzoates by the bph-encoded catabolic pathway of Burkholderia sp. strain LB400.
Applied and environmental microbiology 1999;65(8):3614-21.
1999: P M Golyshin; H L Fredrickson; Laura Giuliano; R Rothmel; Kenneth N Timmis; Michail M Yakimov
Effect of novel biosurfactants on biodegradation of polychlorinated biphenyls by pure and mixed bacterial cultures.
The new microbiologica 1999;22(3):257-67.
1999: Balbina Nogales; Edward R B Moore; Wolf-Rainer Abraham; Kenneth N Timmis
Identification of the metabolically active members of a bacterial community in a polychlorinated biphenyl-polluted moorland soil.
Environmental microbiology 1999;1(3):199-212.
1999: J Armengaud; Kenneth N Timmis; Regina-Michaela Wittich
A functional 4-hydroxysalicylate/hydroxyquinol degradative pathway gene cluster is linked to the initial dibenzo-p-dioxin pathway genes in Sphingomonas sp. strain RW1.
Journal of bacteriology 1999;181(11):3452-61.
1999: P Rapp; Kenneth N Timmis
Degradation of chlorobenzenes at nanomolar concentrations by Burkholderia sp. strain PS14 in liquid cultures and in soil.
Applied and environmental microbiology 1999;65(6):2547-52.
1999: Oliver Pelz; M Tesar; Regina-Michaela Wittich; Edward R B Moore; Kenneth N Timmis; Wolf-Rainer Abraham
Towards elucidation of microbial community metabolic pathways: unravelling the network of carbon sharing in a pollutant-degrading bacterial consortium by immunocapture and isotopic ratio mass spectrometry.
Environmental microbiology 1999;1(2):167-74.
1999: S Beil; Kenneth N Timmis; Dietmar H Pieper
Genetic and biochemical analyses of the tec operon suggest a route for evolution of chlorobenzene degradation genes.
Journal of bacteriology 1999;181(1):341-6.
1998: S Beil; J R Mason; Kenneth N Timmis; Dietmar H Pieper
Identification of chlorobenzene dioxygenase sequence elements involved in dechlorination of 1,2,4,5-tetrachlorobenzene.
Journal of bacteriology 1998;180(21):5520-8.
1998: Michail M Yakimov; A Kröger; T N Slepak; Laura Giuliano; Kenneth N Timmis; Peter N Golyshin
A putative lichenysin A synthetase operon in Bacillus licheniformis: initial characterization.
Biochimica et biophysica acta 1998;1399(2-3):141-53.
1998: J Werwath; H A Arfmann; Dietmar H Pieper; Kenneth N Timmis; Regina-Michaela Wittich
Biochemical and genetic characterization of a gentisate 1, 2-dioxygenase from Sphingomonas sp. strain RW5.
Journal of bacteriology 1998;180(16):4171-6.
1998: Jean Armengaud; B Happe; Kenneth N Timmis
Genetic analysis of dioxin dioxygenase of Sphingomonas sp. Strain RW1: catabolic genes dispersed on the genome.
Journal of bacteriology 1998;180(15):3954-66.
1998: N Hugo; Jean Armengaud; Jacques Gaillard; Kenneth N Timmis; Yves Jouanneau
A novel -2Fe-2S- ferredoxin from Pseudomonas putida mt2 promotes the reductive reactivation of catechol 2,3-dioxygenase.
The Journal of biological chemistry 1998;273(16):9622-9.
1998: J Armengaud; Kenneth N Timmis
The reductase RedA2 of the multi-component dioxin dioxygenase system of Sphingomonas sp. RW1 is related to class-I cytochrome P450-type reductases.
European journal of biochemistry / FEBS 1998;253(2):437-44.
1998: C Beckmann; B Haase; Kenneth N Timmis; M Tesar
Multifunctional g3p-peptide tag for current phage display systems.
Journal of immunological methods 1998;212(2):131-8.
1998: M Mau; Kenneth N Timmis
Use of subtractive hybridization to design habitat-based oligonucleotide probes for investigation of natural bacterial communities.
Applied and environmental microbiology 1998;64(1):185-91.
1997: A Suarez; A Güttler; M Strätz; Lothar H Staendner; Kenneth N Timmis; Carlos A Guzmán
Green fluorescent protein-based reporter systems for genetic analysis of bacteria including monocopy applications.
Gene 1997;196(1-2):69-74.
1997: Jean Armengaud; Kenneth N Timmis
Molecular characterization of Fdx1, a putidaredoxin-type [2Fe-2S] ferredoxin able to transfer electrons to the dioxin dioxygenase of Sphingomonas sp. RW1.
European journal of biochemistry / FEBS 1997;247(3):833-42.
1997: S Beil; B Happe; Kenneth N Timmis; Dietmar H Pieper
Genetic and biochemical characterization of the broad spectrum chlorobenzene dioxygenase from Burkholderia sp. strain PS12--dechlorination of 1,2,4,5-tetrachlorobenzene.
European journal of biochemistry / FEBS 1997;247(1):190-9.
1997: SR Klee; BD Tzschaschel; M Singh; I Fält; A A Lindberg; Kenneth N Timmis; Carlos A Guzmán
Construction and characterization of genetically-marked bivalent anti-Shigella dysenteriae 1 and anti-Shigella flexneri Y live vaccine candidates.
Microbial pathogenesis 1997;22(6):363-76.
1997: SR Klee; BD Tzschaschel; I Fält; A Kärnell; A A Lindberg; Kenneth N Timmis; Carlos A Guzmán
Construction and characterization of a live attenuated vaccine candidate against Shigella dysenteriae type 1.
Infection and immunity 1997;65(6):2112-8.
1997: Gursharan S Chhatwal; Mark J Walker; H Yan; Kenneth N Timmis; Carlos A Guzmán
Temperature dependent expression of an acid phosphatase by Bordetella bronchiseptica: role in intracellular survival.
Microbial pathogenesis 1997;22(5):257-64.
1997: SR Klee; BD Tzschaschel; Kenneth N Timmis; C A Guzman
Influence of different rol gene products on the chain length of Shigella dysenteriae type 1 lipopolysaccharide O antigen expressed by Shigella flexneri carrier strains.
Journal of bacteriology 1997;179(7):2421-5.
1997: D B McKay; Michael Seeger; Marco Zielinski; Bernd Hofer; Kenneth N Timmis
Heterologous expression of biphenyl dioxygenase-encoding genes from a gram-positive broad-spectrum polychlorinated biphenyl degrader and characterization of chlorobiphenyl oxidation by the gene products.
Journal of bacteriology 1997;179(6):1924-30.
1997: A Suarez; Lothar H Staendner; Manfred Rohde; G Piatti; Kenneth N Timmis; Carlos A Guzmán
Stable expression of pertussis toxin in Bordetella bronchiseptica under the control of a tightly regulated promoter.
Applied and environmental microbiology 1997;63(1):122-7.