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Akira Tsugita

Research Profile

Genes & Molecular Sequences

Amino Acid Sequences

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Chemicals & Drugs

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Publications

TOP 3
Hirotaka Minagawa; Taro Yamashita; Masao Honda; Yo Tabuse; Kenichi Kamijo; Akira Tsugita; Shuichi Kaneko
Comparative analysis of proteome and transcriptome in human hepatocellular carcinoma using 2D-DIGE and SAGE.
Christopher Taylor; Pierre-Alain Binz; Ruedi Aebersold; Michel Affolter; Robert Barkovich; Eric W Deutsch; David M Horn; Andreas Hühmer; Martin Kussmann; Kathryn Lilley; Marcus Macht; Matthias Mann; Dieter Müller; Thomas A Neubert; Janice Nickson; Scott D Patterson; Roberto Raso; Kathryn Resing; Sean L Seymour; Akira Tsugita; Ioannis Xenarios; Rong Zeng; Randall K Julian
Guidelines for reporting the use of mass spectrometry in proteomics.
Christopher Taylor; Norman W Paton; Kathryn S Lilley; Pierre-Alain Binz; Randall K Julian; Andrew R Jones; Weimin Zhu; Rolf Apweiler; Ruedi Aebersold; Eric Deutsch; Michael J Dunn; albert heck; Alexander Leitner; Marcus Macht; Matthias Mann; Lennart Martens; Thomas A Neubert; Scott D Patterson; Peipei Ping; Sean L Seymour; Puneet Souda; Akira Tsugita; Joel Vandekerckhove; Thomas M Vondriska; Julian P Whitelegge; Marc R Wilkins; Ioannnis Xenarios; John R Yates; Henning Hermjakob
The minimum information about a proteomics experiment (MIAPE).

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2008: Hirotaka Minagawa; Taro Yamashita; Masao Honda; Yo Tabuse; Kenichi Kamijo; Akira Tsugita; Shuichi Kaneko
Comparative analysis of proteome and transcriptome in human hepatocellular carcinoma using 2D-DIGE and SAGE.
The protein journal 2008;27(7-8):409-19.
2008: Christopher Taylor; Pierre-Alain Binz; Ruedi Aebersold; Michel Affolter; Robert Barkovich; Eric W Deutsch; David M Horn; Andreas Hühmer; Martin Kussmann; Kathryn Lilley; Marcus Macht; Matthias Mann; Dieter Müller; Thomas A Neubert; Janice Nickson; Scott D Patterson; Roberto Raso; Kathryn Resing; Sean L Seymour; Akira Tsugita; Ioannis Xenarios; Rong Zeng; Randall K Julian
Guidelines for reporting the use of mass spectrometry in proteomics.
Nature biotechnology 2008;26(8):860-1.
2007: Christopher Taylor; Norman W Paton; Kathryn S Lilley; Pierre-Alain Binz; Randall K Julian; Andrew R Jones; Weimin Zhu; Rolf Apweiler; Ruedi Aebersold; Eric Deutsch; Michael J Dunn; albert heck; Alexander Leitner; Marcus Macht; Matthias Mann; Lennart Martens; Thomas A Neubert; Scott D Patterson; Peipei Ping; Sean L Seymour; Puneet Souda; Akira Tsugita; Joel Vandekerckhove; Thomas M Vondriska; Julian P Whitelegge; Marc R Wilkins; Ioannnis Xenarios; John R Yates; Henning Hermjakob
The minimum information about a proteomics experiment (MIAPE).
Nature biotechnology 2007;25(8):887-93.
2007: Etsuko Maruyama; Kenji Ogawa; Shogo Endo; Masafumi Tsujimoto; Tsutomu Hashikawa; Takuji Nabetani; Akira Tsugita
Brain-derived neurotrophic factor induces cell surface expression of short-form tenascin R complex in hippocampal postsynapses.
The international journal of biochemistry & cell biology 2007;39(10):1930-42.
2006: Takuji Nabetani; Kenji Miyazaki; Yo Tabuse; Akira Tsugita
Analysis of acidic peptides with a matrix-assisted laser desorption/ionization mass spectrometry using positive and negative ion modes with additive monoammonium phosphate.
Proteomics 2006;6(16):4456-65.
2006: Yuzo Nozu; Akira Tsugita; Kenichi Kamijo
Proteomic analysis of rice leaf, stem and root tissues during growth course.
Proteomics 2006;6(12):3665-70.
2006: Kenji Miyazaki; Akira Tsugita
C-terminal sequencing method for proteins in polyacrylamide gel by the reaction of acetic anhydride.
Proteomics 2006;6(7):2026-33.
2005: Yo Tabuse; Takuji Nabetani; Akira Tsugita
Proteomic analysis of protein expression profiles during Caenorhabditis elegans development using two-dimensional difference gel electrophoresis.
Proteomics 2005;5(11):2876-91.
2005: Takuji Nabetani; Yo Tabuse; Akira Tsugita; Junichi Shoda
Proteomic analysis of livers of patients with primary hepatolithiasis.
Proteomics 2005;5(4):1043-61.
2005: Yutaka Yoshida; Kenji Miyazaki; Junichi Kamiie; Masao Sato; Seiji Okuizumi; Akihisa Kenmochi; Ken'ichi Kamijo; Takuji Nabetani; Akira Tsugita; Bo Xu; Ying Zhang; Eishin Yaoita; Tetsuo Osawa; Tadashi Yamamoto
Two-dimensional electrophoretic profiling of normal human kidney glomerulus proteome and construction of an extensible markup language (XML)-based database.
Proteomics 2005;5(4):1083-96.
2004: Kazuyuki Nakamura; Ruedi Aebersold; Amos Bairoch; Michael Dunn; Julio Celis; Samir Hanash; Denis Hochstrasser; Ian Humphrey-Smith; Peter James; Joachim Klose; Joshua LaBaer; Hanno Langen; Matthias Mann; Raj Parekh; Scott Patterson; Christopher Pearce; Peter Poepstorff; Richard J Simpson; Ian Tomlinson; Akira Tsugita; John Yates
[From genome to proteome--aim of human proteomics].
Seikagaku. The Journal of Japanese Biochemical Society 2004;76(10):1271-4.
2004: Kenji Miyazaki; Akira Tsugita
C-terminal sequencing method for peptides and proteins by the reaction with a vapor of perfluoric acid in acetic anhydride.
Proteomics 2004;4(1):11-9.
2003: Ken Yamane; Atsushi Minamoto; Hidetoshi Yamashita; Hiroshi Takamura; Yuka Miyamoto-Myoken; Katsutoshi Yoshizato; Takuji Nabetani; Akira Tsugita; Hiromu K Mishima
Proteome analysis of human vitreous proteins.
Molecular & cellular proteomics : MCP 2003;2(11):1177-87.
2002: Jialing Gao; Akira Tsugita; Mitsuo Takayama; Lin Xu
A programmable fragmentation analysis of proteins by in-source decay in MALDI-TOF mass spectrometry.
Analytical chemistry 2002;74(6):1449-57.
2002: Cathy H Wu; Hongzhan Huang; Leslie Arminski; Jorge Castro-Alvear; Yongxing Chen; Zhang-Zhi Hu; Robert S Ledley; Kali C Lewis; Hans-Werner Mewes; Bruce C Orcutt; Baris E Suzek; Akira Tsugita; CR Vinayaka; Lai-Su L Yeh; Jian Zhang; Winona C Barker
The Protein Information Resource: an integrated public resource of functional annotation of proteins.
Nucleic acids research 2002;30(1):35-7.
2001: Akira Tsugita; Kenji Miyazaki; Takuji Nabetani; T Nozawa; Masayuki Kamo; T Kawakami
Application of chemical selective cleavage methods to analyze post-translational modification in proteins.
Proteomics 2001;1(9):1082-91.
2001: Winona C Barker; JS Garavelli; Z Hou; Hongzhan Huang; Robert S Ledley; PB McGarvey; Hans-Werner Mewes; Bruce C Orcutt; F Pfeiffer; Akira Tsugita; CR Vinayaka; C Xiao; Lai-Su L Yeh; C Wu
Protein Information Resource: a community resource for expert annotation of protein data.
Nucleic acids research 2001;29(1):29-32.
2000: Norie Araki; T Morimasa; T Sakai; H Tokuoh; Shunji Yunoue; Masayuki Kamo; K Miyazaki; K Abe; Hideyuki Saya; Akira Tsugita
Comparative analysis of brain proteins from p53-deficient mice by two-dimensional electrophoresis.
Electrophoresis 2000;21(9):1880-9.
2000: Akira Tsugita; T Kawakami; T Uchida; T Sakai; Masayuki Kamo; T Matsui; Y Watanabe; T Morimasa; K Hosokawa; T Toda
Proteome analysis of mouse brain: two-dimensional electrophoresis profiles of tissue proteins during the course of aging.
Electrophoresis 2000;21(9):1853-71.
2000: I Ueno; T Sakai; M Yamaoka; R Yoshida; Akira Tsugita
Analysis of blood plasma proteins in patients with Alzheimer's disease by two-dimensional electrophoresis, sequence homology and immunodetection.
Electrophoresis 2000;21(9):1832-45.
2000: Winona C Barker; JS Garavelli; Hongzhan Huang; PB McGarvey; Bruce C Orcutt; GY Srinivasarao; C Xiao; Lai-Su L Yeh; Robert S Ledley; J F Janda; F Pfeiffer; Hans-Werner Mewes; Akira Tsugita; C Wu
The protein information resource (PIR).
Nucleic acids research 2000;28(1):41-4.
1999: Akira Tsugita; T Kawakami
[Proteome analysis: the state of the art of the methodology].
Nihon hōigaku zasshi = The Japanese journal of legal medicine 1999;53(2):191-8.
1999: Masayuki Kamo; Akira Tsugita
N-terminal amino acid sequencing of 2-DE spots.
Methods in molecular biology (Clifton, N.J.) 1999;112():461-6.
1999: Akira Tsugita; Masayuki Kamo
2-D electrophoresis of plant proteins.
Methods in molecular biology (Clifton, N.J.) 1999;112():95-7.
1999: Winona C Barker; JS Garavelli; PB McGarvey; CR Marzec; Bruce C Orcutt; GY Srinivasarao; Lai-Su L Yeh; Robert S Ledley; Hans-Werner Mewes; F Pfeiffer; Akira Tsugita; C Wu
The PIR-International Protein Sequence Database.
Nucleic acids research 1999;27(1):39-43.
1998: Akira Tsugita; Masayuki Kamo; T Kawakami; K Miyazaki; M Takayama; R Shen
Multiple-sites C-terminal sequencing methods of protein and identification of protein spots on one- and two-dimensional gel electrophoresis.
Journal of protein chemistry 1998;17(6):520-1.
1998: Masayuki Kamo; Keiji Takamoto; M J Horn; K Miyazaki; Akira Tsugita
A novel C-terminal stepwise sequencing method.
Journal of protein chemistry 1998;17(6):511-2.
1998: Masayuki Kamo; T Kawakami; Akira Tsugita
Novel detection methods for modification sites using chemical cleavages and mass spectrometry.
Journal of protein chemistry 1998;17(6):511.
1998: Masayuki Kamo; Akira Tsugita
Specific cleavage of amino side chains of serine and threonine in peptides and proteins with S-ethyltrifluorothioacetate vapor.
European journal of biochemistry / FEBS 1998;255(1):162-71.
1998: Akira Tsugita
[Recent development of C-terminal sequence analysis of proteins].
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1998;43(7):857-65.
1998: Akira Tsugita; Masayuki Kamo; K Miyazaki; M Takayama; T Kawakami; R Shen; T Nozawa
Additional possible tools for identification of proteins on one- or two-dimensional electrophoresis.
Electrophoresis 1998;19(6):928-38.
1998: Winona C Barker; JS Garavelli; Daniel H Haft; LT Hunt; CR Marzec; Bruce C Orcutt; GY Srinivasarao; Lai-Su L Yeh; Robert S Ledley; Hans-Werner Mewes; F Pfeiffer; Akira Tsugita
The PIR-International Protein Sequence Database.
Nucleic acids research 1998;26(1):27-32.
1997: T Kawakami; Masayuki Kamo; Keiji Takamoto; K Miyazaki; L P Chow; Y Ueno; Akira Tsugita
Bond-specific chemical cleavages of peptides and proteins with perfluoric acid vapors: novel peptide bond cleavages of glycyl-threonine, the amino side of serine residues and the carboxyl side of aspartic acid residues.
Journal of biochemistry 1997;121(1):68-76.
1997: D G George; Robert J Dodson; JS Garavelli; Daniel H Haft; LT Hunt; CR Marzec; Bruce C Orcutt; K E Sidman; GY Srinivasarao; Lai-Su L Yeh; Leslie Arminski; Robert S Ledley; Akira Tsugita; Winona C Barker
The Protein Information Resource (PIR) and the PIR-International Protein Sequence Database.
Nucleic acids research 1997;25(1):24-8.
1996: H Iwadate; Akira Tsugita; L P Chow; K Kizuki; A L Stritt-Etter; J Li; P Schúrmann
Amino acid sequence of the maize ferredoxin:thioredoxin reductase variable subunit.
European journal of biochemistry / FEBS 1996;241(1):121-5.
1996: Akira Tsugita; Masayuki Kamo; T Kawakami; Y Ohki
Two-dimensional electrophoresis of plant proteins and standardization of gel patterns.
Electrophoresis 1996;17(5):855-65.
1996: L P Chow; Masayuki Kamo; Yoshio Ueno; Akira Tsugita
Amino acid sequence of peptidyl-prolyl isomerase a of Fusarium sporotrichioides.
Natural toxins 1996;4(4):149-55.
1996: D G George; Winona C Barker; H W Mewes; F Pfeiffer; Akira Tsugita
The PIR-International Protein Sequence Database.
Nucleic acids research 1996;24(1):17-20.
1995: L P Chow; H Iwadate; Kazuyoshi Yano; Masayuki Kamo; Akira Tsugita; L Gardet-Salvi; A L Stritt-Etter; Peter Schürmann
Amino acid sequence of spinach ferredoxin:thioredoxin reductase catalytic subunit and identification of thiol groups constituting a redox-active disulfide and a [4Fe-4S] cluster.
European journal of biochemistry / FEBS 1995;231(1):149-56.
1995: Keiji Takamoto; Masayuki Kamo; K Kubota; K Satake; Akira Tsugita
Carboxy-terminal degradation of peptides using perfluoroacyl anhydrides. A C-terminal sequencing method.
European journal of biochemistry / FEBS 1995;228(2):362-72.
1995: Masayuki Kamo; T Kawakami; N Miyatake; Akira Tsugita
Separation and characterization of Arabidopsis thaliana proteins by two-dimensional gel electrophoresis.
Electrophoresis 1995;16(3):423-30.
1994: D G George; Winona C Barker; H W Mewes; F Pfeiffer; Akira Tsugita
The PIR-International Protein Sequence Database.
Nucleic acids research 1994;22(17):3569-73.
1994: H Iwadate; Kazuyoshi Yano; Masayuki Kamo; L Gardet-Salvi; Peter Schürmann; Akira Tsugita
Amino acid sequence of spinach ferredoxin:thioredoxin reductase variable subunit.
European journal of biochemistry / FEBS 1994;223(2):465-71.
1994: Akira Tsugita; T Kawakami; Y Uchiyama; Masayuki Kamo; N Miyatake; Y Nozu
Separation and characterization of rice proteins.
Electrophoresis 1994;15(5):708-20.
1994: N Miyatake; K Satake; Masayuki Kamo; Akira Tsugita
Specific chemical cleavage of asparaginyl and glycyl-glycine bonds in peptides and proteins by anhydrous hydrazine vapor.
Journal of biochemistry 1994;115(2):208-12.
1993: Winona C Barker; D G George; H W Mewes; F Pfeiffer; Akira Tsugita
The PIR-International databases.
Nucleic acids research 1993;21(13):3089-92.
1993: Fumio Fukai; T Iso; K Sekiguchi; N Miyatake; Akira Tsugita; T Katayama
An amino-terminal fibronectin fragment stimulates the differentiation of ST-13 preadipocytes.
Biochemistry 1993;32(22):5746-51.
1993: N Miyatake; Masayuki Kamo; K Satake; Y Uchiyama; Akira Tsugita
Removal of N-terminal formyl groups and deblocking of pyrrolidone carboxylic acid of proteins with anhydrous hydrazine vapor.
European journal of biochemistry / FEBS 1993;212(3):785-9.
1992: Akira Tsugita; Keiji Takamoto; Masayuki Kamo; H Iwadate
C-terminal sequencing of protein. A novel partial acid hydrolysis and analysis by mass spectrometry.
European journal of biochemistry / FEBS 1992;206(3):691-6.
1992: Winona C Barker; D G George; H W Mewes; Akira Tsugita
The PIR-International Protein Sequence Database.
Nucleic acids research 1992;20 Suppl():2023-6.
1992: K Nakazato; Isao Enami; Y Tanaka; Y Uchiyama; Akira Tsugita; K Satake
Preparation of amino-terminal half-molecule of ovotransferrin by tryptic digestion of intact molecule selectively saturated with Al(III) at the N-lobe.
Bioscience, biotechnology, and biochemistry 1992;56(4):687-8.
1992: N Ohnishi; M Ikekita; Y Atomi; K Kizuki; H Moriya; K Kondo; H Yamada; Akira Tsugita
Canine pancreatic kallikrein: enzyme isolation and characterization.
Protein sequences & data analysis 1992;5(1):1-5.
1992: K Nakazato; K Kondo; Akira Tsugita; Isao Enami; K Satake
The carboxyl-terminal half-molecule of ovotransferrin prepared by selective digestion of the amino-terminal lobe with thermolysin.
Bioscience, biotechnology, and biochemistry 1992;56(1):71-5.
1992: M Ikekita; C S Jone; Masayuki Kamo; Akira Tsugita; K Kizuki; H Moriya
Purification and characterization of the major cationic kallikrein inhibitor in bovine pituitary gland.
Protein sequences & data analysis 1992;5(1):7-11.
1991: C S Jone; Akira Tsugita; K Satake; F Okibayashi; K Imai; T Yagi; K Takahashi; Lai-Su L Yeh
Non-sequence databases for biological activity and physicochemical properties.
Protein sequences & data analysis 1991;4(6):367-74.
1991: A Ubasawa; F Okibayashi; C S Jone; M Ikehara; D G George; Akira Tsugita
A variant database.
Protein sequences & data analysis 1991;4(6):341-7.
1991: C S Jone; Norihiro Kotani; K Aso; L Yang; Isao Enami; K Kondo; Akira Tsugita
Amino acid sequence of the 8-kDa protein in photosystem I reaction center complex from a thermophilic cyanobacterium, Synechococcus elongatus.
Protein sequences & data analysis 1991;4(6):327-31.
1991: H Yamada; H Moriya; Akira Tsugita
Development of an acid hydrolysis method with high recoveries of tryptophan and cysteine for microquantities of protein.
Analytical biochemistry 1991;198(1):1-5.
1991: H Yano; K Satake; Yoshio Ueno; K Kondo; Akira Tsugita
Amino acid sequence of the hemerythrin alpha subunit from Lingula unguis.
Journal of biochemistry 1991;110(3):376-80.
1991: H Suzuki; A S Kolaskar; S L Samuel; J Otsuka; Akira Tsugita
A protein secondary structure database (PSS).
Protein sequences & data analysis 1991;4(2):97-104.
1991: Norihiro Kotani; Akira Tsugita; K Kondo; K Aso; Isao Enami
Amino acid sequence of 10-kDa protein in photosystem I reaction-center complex from a thermophilic cyanobacterium, Synechococcus elongatus Naegeli.
Protein sequences & data analysis 1991;4(2):93-6.
1991: H Yano; K Satake; Yoshio Ueno; Akira Tsugita
The amino acid sequence of the beta chain of hemerythrin from Lingula unguis.
Protein sequences & data analysis 1991;4(2):87-91.
1991: Norihiro Kotani; Isao Enami; K Aso; Akira Tsugita
Amino acid sequence of the 14-kDa protein in the photosystem I reaction center complex from Synechococcus elongatus Naegeli.
Protein sequences & data analysis 1991;4(2):81-6.
1991: Akira Tsugita; Kazuyoshi Yano; L Gardet-Salvi; Peter Schürmann
Characterization of spinach ferredoxin-thioredoxin reductase.
Protein sequences & data analysis 1991;4(1):9-13.
1991: Fumio Fukai; H Suzuki; K Suzuki; Akira Tsugita; T Katayama
Rat plasma fibronectin contains two distinct chemotactic domains for fibroblastic cells.
The Journal of biological chemistry 1991;266(14):8807-13.
1990: H Yano; K Aso; Akira Tsugita
Further study on gas phase acid hydrolysis of protein: improvement of recoveries for tryptophan, tyrosine, and methionine.
Journal of biochemistry 1990;108(4):579-82.
1990: Isao Enami; H Kaiho; H Izumi; S Katoh; Norihiro Kotani; C S Jone; Masayuki Kamo; Akira Tsugita
N-terminal amino acid sequence analysis of small subunits of photosystem I reaction center complex from a thermophilic cyanobacterium, Synechococcus elongatus Nägeli.
Protein sequences & data analysis 1990;3(3):257-62.
1990: T Uchida; H Yano; K Satake; I Kubota; Akira Tsugita
The amino acid sequence of hemerythrin from Siphonosoma cumanense.
Protein sequences & data analysis 1990;3(2):141-7.
1990: T Kunisawa; M Nakamura; H Watanabe; Jinya Otsuka; Akira Tsugita; Lai-Su L Yeh; D G George; W C Barker
Escherichia coli K12 genomic database.
Protein sequences & data analysis 1990;3(2):157-62.
1990: M Kamada; M Ikekita; T Kurahashi; Kiyoshi Aoki; K Kizuki; H Moriya; C C Sweeley; Masayuki Kamo; Akira Tsugita
Generation of a different type of beta-kallikrein from porcine pancreatic alpha-kallikrein by the action of chymotrypsin--observation of proteolytic processing occurring around "kallikrein autolysis loop" region.
Chemical & pharmaceutical bulletin 1990;38(4):1053-7.
1990: K Satake; M Yugi; Masayuki Kamo; H Kihara; Akira Tsugita
Hemerythrin from Lingula unguis consists of two different subunits, alpha and beta.
Protein sequences & data analysis 1990;3(1):1-5.
1989: H Yano; Masayuki Kamo; Akira Tsugita; K Aso; Y Nozu
The amino acid sequence of plastocyanin from rice (Oryza sativa, subspecies japonica).
Protein sequences & data analysis 1989;2(5):385-9.
1989: Akira Tsugita; Masayuki Kamo; C S Jone; N Shikama
Sensitization of Edman amino acid derivatives using the fluorescent reagent, 4-aminofluorescein.
Journal of biochemistry 1989;106(1):60-5.
1989: Masayuki Kamo; Norihiro Kotani; Akira Tsugita; Y K He; Y Nozu
Amino acid sequences of ferredoxins from rice cultivars, japonica and indica.
Protein sequences & data analysis 1989;2(4):289-93.
1989: Masayuki Kamo; Akira Tsugita; C Wiessner; N Wedel; D Bartling; Reinhold G Herrmann; F Aguilar; L Gardet-Salvi; Peter Schürmann
Primary structure of spinach-chloroplast thioredoxin f. Protein sequencing and analysis of complete cDNA clones for spinach-chloroplast thioredoxin f.
European journal of biochemistry / FEBS 1989;182(2):315-22.
1988: Akira Tsugita; I Arai; Masayuki Kamo; C S Jone
Sensitization of amino acid derivatives obtained from Edman degradation with radioactively-labeled iodohistamine.
Journal of biochemistry 1988;103(3):399-401.
1987: Masayuki Kamo; Akira Tsugita
Carboxypeptidase digestion in the presence of detergents.
Journal of biochemistry 1987;102(2):243-6.