Username

Password

Forgot Password?

Preview

Sign-in free and Explore the Exciting World of BiomedExperts:

Over 1.500.000 Profiles
More than 1.800 Organizations worldwide
State of the Art Network Visualizations

Manage your own Profile
Locate Experts in your Country/Region
Locate Experts in your 1. and 2. Level Network
Connect to Experts Worldwide

NetworkView

Douglas Turner

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Concepts & Ideas

Occupations

Thermodynamics

Chemicals & Drugs

Phenomena

Physiology

RNA Splicing

Procedures

Biomolecular Nuclear Magnetic Resonance

Sign-in to see full Profile

Network (preview)

Co-Publications
Name
40
Kierzek, Ryszard
16
Mathews, David
12
Krugh, Thomas
12
Disney, Matthew
10
Freier, Susan
10
Kennedy, Scott
9
Kierzek, Elzbieta
9
SantaLucia, John
9
Burkard, Mark
8
Schroeder, Susan
7
Chen, Gang
6
Znosko, Brent
6
Testa, SM
6
Childs, Jessica
5
Pasternak, Anna

Sign-in to see all Coauthors

Publications

TOP 3
Carlucci Marta; Kierzek Elzbieta; Olejnik Anna; Turner Douglas H; Kierzek Ryszard
Chemical synthesis of LNA-2-thiouridine and its influence on stability and selectivity of oligonucleotide binding to RNA.
Kierzek Elzbieta; Christensen Shawn M; Eickbush Thomas H; Kierzek Ryszard; Turner Douglas H; Moss Walter N
Secondary structures for 5' regions of R2 retrotransposon RNAs reveal a novel conserved pseudoknot and regions that evolve under different constraints.
Chen Gang; Kennedy Scott D; Turner Douglas H
A CA(+) pair adjacent to a sheared GA or AA pair stabilizes size-symmetric RNA internal loops.

Sign-in to see all Publications

Sign in free and see...

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the visualized research activity
of experts around the globe

Sign-in to see more

Geonetwork of Douglas Turner (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

Sign-in to see more

All Publications

2009: Carlucci Marta; Kierzek Elzbieta; Olejnik Anna; Turner Douglas H; Kierzek Ryszard
Chemical synthesis of LNA-2-thiouridine and its influence on stability and selectivity of oligonucleotide binding to RNA.
Biochemistry 2009;48(46):10882-93.
2009: Kierzek Elzbieta; Christensen Shawn M; Eickbush Thomas H; Kierzek Ryszard; Turner Douglas H; Moss Walter N
Secondary structures for 5' regions of R2 retrotransposon RNAs reveal a novel conserved pseudoknot and regions that evolve under different constraints.
Journal of molecular biology 2009;390(3):428-42.
2009: Chen Gang; Kennedy Scott D; Turner Douglas H
A CA(+) pair adjacent to a sheared GA or AA pair stabilizes size-symmetric RNA internal loops.
Biochemistry 2009;48(24):5738-52.
2009: Kierzek Elzbieta; Pasternak Anna; Pasternak Karol; Gdaniec Zofia; Yildirim Ilyas; Turner Douglas H; Kierzek Ryszard
Contributions of stacking, preorganization, and hydrogen bonding to the thermodynamic stability of duplexes between RNA and 2'-O-methyl RNA with locked nucleic acids.
Biochemistry 2009;48(20):4377-87.
2008: Hart James M; Kennedy Scott D; Mathews David H; Turner Douglas H
NMR-assisted prediction of RNA secondary structure: identification of a probable pseudoknot in the coding region of an R2 retrotransposon.
Journal of the American Chemical Society 2008;130(31):10233-9.
2008: Kierzek Elzbieta; Kierzek Ryszard; Moss Walter N; Christensen Shawn M; Eickbush Thomas H; Turner Douglas H
Isoenergetic penta- and hexanucleotide microarray probing and chemical mapping provide a secondary structure model for an RNA element orchestrating R2 retrotransposon protein function.
Nucleic acids research 2008;36(6):1770-82.
2008: Pasternak Anna; Kierzek Elzbieta; Pasternak Karol; Fratczak Agata; Turner Douglas H; Kierzek Ryszard
The thermodynamics of 3'-terminal pyrene and guanosine for the design of isoenergetic 2'-O-methyl-RNA-LNA chimeric oligonucleotide probes of RNA structure.
Biochemistry 2008;47(5):1249-58.
2007: Shankar Neelaabh; Xia Tianbing; Kennedy Scott D; Krugh Thomas R; Mathews David H; Turner Douglas H
NMR reveals the absence of hydrogen bonding in adjacent UU and AG mismatches in an isolated internal loop from ribosomal RNA.
Biochemistry 2007;46(44):12665-78.
2007: Li Huixiang; Liang Ruiting; Turner Douglas H; Rothberg Lewis J; Duan Shenghua
Selective quenching of fluorescence from unbound oligonucleotides by gold nanoparticles as a probe of RNA structure.
RNA (New York, N.Y.) 2007;13(11):2034-41.
2007: Chen Gang; Kierzek Ryszard; Yildirim Ilyas; Krugh Thomas R; Turner Douglas H; Kennedy Scott D
Stacking effects on local structure in RNA: changes in the structure of tandem GA pairs when flanking GC pairs are replaced by isoG-isoC pairs.
The journal of physical chemistry. B 2007;111(24):6718-27.
2007: Tolbert Blanton S; Kennedy Scott D; Schroeder Susan J; Krugh Thomas R; Turner Douglas H
NMR structures of (rGCUGAGGCU)2 and (rGCGGAUGCU)2: probing the structural features that shape the thermodynamic stability of GA pairs.
Biochemistry 2007;46(6):1511-22.
2007: Pasternak Anna; Kierzek Elzbieta; Pasternak Karol; Turner Douglas H; Kierzek Ryszard
A chemical synthesis of LNA-2,6-diaminopurine riboside, and the influence of 2'-O-methyl-2,6-diaminopurine and LNA-2,6-diaminopurine ribosides on the thermodynamic properties of 2'-O-methyl RNA/RNA heteroduplexes.
Nucleic acids research 2007;35(12):4055-63.
2006: Shankar Neelaabh; Kennedy Scott D; Chen Gang; Krugh Thomas R; Turner Douglas H
The NMR structure of an internal loop from 23S ribosomal RNA differs from its structure in crystals of 50s ribosomal subunits.
Biochemistry 2006;45(39):11776-89.
2006: Duan Shenghua; Mathews David H; Turner Douglas H
Interpreting oligonucleotide microarray data to determine RNA secondary structure: application to the 3' end of Bombyx mori R2 RNA.
Biochemistry 2006;45(32):9819-32.
2006: Chen Gang; Kennedy Scott D; Qiao Jing; Krugh Thomas R; Turner Douglas H
An alternating sheared AA pair and elements of stability for a single sheared purine-purine pair flanked by sheared GA pairs in RNA.
Biochemistry 2006;45(22):6889-903.
2006: Mathews David H; Turner Douglas H
Prediction of RNA secondary structure by free energy minimization.
Current opinion in structural biology 2006;16(3):270-8.
2006: Jang Se Bok; Hung Li-Wei; Jeong Mi Suk; Holbrook Elizabeth L; Chen Xiaoying; Turner Douglas H; Holbrook Stephen R
The crystal structure at 1.5 angstroms resolution of an RNA octamer duplex containing tandem G.U basepairs.
Biophysical journal 2006;90(12):4530-7.
2006: Chen Gang; Turner Douglas H
Consecutive GA pairs stabilize medium-size RNA internal loops.
Biochemistry 2006;45(12):4025-43.
2006: Kierzek Elzbieta; Kierzek Ryszard; Turner Douglas H; Catrina Irina E
Facilitating RNA structure prediction with microarrays.
Biochemistry 2006;45(2):581-93.
2006: Lu Zhi John; Turner Douglas H; Mathews David H
A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation.
Nucleic acids research 2006;34(17):4912-24.
2006: Kierzek Elzbieta; Mathews David H; Ciesielska Anna; Turner Douglas H; Kierzek Ryszard
Nearest neighbor parameters for Watson-Crick complementary heteroduplexes formed between 2'-O-methyl RNA and RNA oligonucleotides.
Nucleic acids research 2006;34(13):3609-14.
2005: Disney Matthew D; Stephenson Ruth; Wright Terry W; Haidaris Constantine G; Turner Douglas H; Gigliotti Francis
Activity of Hoechst 33258 against Pneumocystis carinii f. sp. muris, Candida albicans, and Candida dubliniensis.
Antimicrobial agents and chemotherapy 2005;49(4):1326-30.
2005: Chen Gang; Znosko Brent M; Kennedy Scott D; Krugh Thomas R; Turner Douglas H
Solution structure of an RNA internal loop with three consecutive sheared GA pairs.
Biochemistry 2005;44(8):2845-56.
2005: Kierzek Elzbieta; Ciesielska Anna; Pasternak Karol; Mathews David H; Turner Douglas H; Kierzek Ryszard
The influence of locked nucleic acid residues on the thermodynamic properties of 2'-O-methyl RNA/RNA heteroduplexes.
Nucleic acids research 2005;33(16):5082-93.
2004: Znosko Brent M; Kennedy Scott D; Wille Pamela C; Krugh Thomas R; Turner Douglas H
Structural features and thermodynamics of the J4/5 loop from the Candida albicans and Candida dubliniensis group I introns.
Biochemistry 2004;43(50):15822-37.
2004: Disney Matthew D; Childs Jessica L; Turner Douglas H
Hoechst 33258 selectively inhibits group I intron self-splicing by affecting RNA folding.
Chembiochem : a European journal of chemical biology 2004;5(12):1647-52.
2004: Chen Gang; Znosko Brent M; Jiao Xiaoqi; Turner Douglas H
Factors affecting thermodynamic stabilities of RNA 3 x 3 internal loops.
Biochemistry 2004;43(40):12865-76.
2004: Ruschak Amy M; Mathews David H; Bibillo Arkadiusz; Spinelli Sherry L; Childs Jessica L; Eickbush Thomas H; Turner Douglas H
Secondary structure models of the 3' untranslated regions of diverse R2 RNAs.
RNA (New York, N.Y.) 2004;10(6):978-87.
2004: Mathews David H; Disney Matthew D; Childs Jessica L; Schroeder Susan J; Zuker Michael; Turner Douglas H
Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(19):7287-92.
2004: Disney Matthew D; Childs Jessica L; Turner Douglas H
New approaches to targeting RNA with oligonucleotides: inhibition of group I intron self-splicing.
Biopolymers 2004;73(1):151-61.
2003: Schroeder Susan J; Fountain Matthew A; Kennedy Scott D; Lukavsky Peter J; Puglisi Joseph D; Krugh Thomas R; Turner Douglas H
Thermodynamic stability and structural features of the J4/5 loop in a Pneumocystis carinii group I intron.
Biochemistry 2003;42(48):14184-96.
2003: Childs Jessica L; Poole Alex W; Turner Douglas H
Inhibition of Escherichia coli RNase P by oligonucleotide directed misfolding of RNA.
RNA (New York, N.Y.) 2003;9(12):1437-45.
2003: Znosko Brent M; Barnes Thomas W; Krugh Thomas R; Turner Douglas H
NMR studies of DNA single strands and DNA:RNA hybrids with and without 1-propynylation at C5 of oligopyrimidines.
Journal of the American Chemical Society 2003;125(20):6090-7.
2003: Disney Matthew D; Haidaris Constantine G; Turner Douglas H
Uptake and antifungal activity of oligonucleotides in Candida albicans.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(4):1530-4.
2002: Znosko Brent M; Burkard Mark E; Krugh Thomas R; Turner Douglas H
Molecular recognition in purine-rich internal loops: thermodynamic, structural, and dynamic consequences of purine for adenine substitutions in 5'(rGGCAAGCCU)2.
Biochemistry 2002;41(50):14978-87.
2002: Znosko Brent M; Burkard Mark E; Schroeder Susan J; Krugh Thomas R; Turner Douglas H
Sheared Aanti.Aanti base pairs in a destabilizing 2 x 2 internal loop: the NMR structure of 5'(rGGCAAGCCU)2.
Biochemistry 2002;41(50):14969-77.
2002: Childs Jessica L; Disney Matthew D; Turner Douglas H
Oligonucleotide directed misfolding of RNA inhibits Candida albicans group I intron splicing.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(17):11091-6.
2002: Disney Matthew D; Turner Douglas H
Molecular recognition by the Candida albicans group I intron: tertiary interactions with an imino G.A pair facilitate binding of the 5' exon and lower the KM for guanosine.
Biochemistry 2002;41(25):8113-9.
2002: Mathews David H; Turner Douglas H
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences.
Journal of molecular biology 2002;317(2):191-203.
2002: Mathews David H; Turner Douglas H
Experimentally derived nearest-neighbor parameters for the stability of RNA three- and four-way multibranch loops.
Biochemistry 2002;41(3):869-80.
2001: Steiger M A; Kierzek R; Turner D H; Phizicky E M
Substrate recognition by a yeast 2'-phosphotransferase involved in tRNA splicing and by its Escherichia coli homolog.
Biochemistry 2001;40(46):14098-105.
2001: Barnes T W; Turner D H
C5-(1-propynyl)-2'-deoxy-pyrimidines enhance mismatch penalties of DNA:RNA duplex formation.
Biochemistry 2001;40(42):12738-45.
2001: Schroeder S J; Turner D H
Thermodynamic stabilities of internal loops with GU closing pairs in RNA.
Biochemistry 2001;40(38):11509-17.
2001: Barnes T W; Turner D H
Long-range cooperativity due to C5-propynylation of oligopyrimidines enhances specific recognition by uridine of ribo-adenosine over ribo-guanosine.
Journal of the American Chemical Society 2001;123(37):9186-7.
2001: Diamond J M; Turner D H; Mathews D H
Thermodynamics of three-way multibranch loops in RNA.
Biochemistry 2001;40(23):6971-81.
2001: Barnes T W; Turner D H
Long-range cooperativity in molecular recognition of RNA by oligodeoxynucleotides with multiple C5-(1-propynyl) pyrimidines.
Journal of the American Chemical Society 2001;123(18):4107-18.
2001: Disney M D; Matray T; Gryaznov S M; Turner D H
Binding enhancement by tertiary interactions and suicide inhibition of a Candida albicans group I intron by phosphoramidate and 2'-O-methyl hexanucleotides.
Biochemistry 2001;40(21):6520-6.
2001: Disney M D; Haidaris C G; Turner D H
Recognition elements for 5' exon substrate binding to the Candida albicans group I intron.
Biochemistry 2001;40(21):6507-19.
2001: Chen X; Kierzek R; Turner D H
Stability and structure of RNA duplexes containing isoguanosine and isocytidine.
Journal of the American Chemical Society 2001;123(7):1267-74.
2001: Burkard M E; Xia T; Turner D H
Thermodynamics of RNA internal loops with a guanosine-guanosine pair adjacent to another noncanonical pair.
Biochemistry 2001;40(8):2478-83.
2000: Disney M D; Gryaznov S M; Turner D H
Contributions of individual nucleotides to tertiary binding of substrate by a Pneumocystis carinii group I intron.
Biochemistry 2000;39(46):14269-78.
2000: Burkard M E; Turner D H
NMR structures of r(GCAGGCGUGC)2 and determinants of stability for single guanosine-guanosine base pairs.
Biochemistry 2000;39(38):11748-62.
2000: Schroeder S J; Turner D H
Factors affecting the thermodynamic stability of small asymmetric internal loops in RNA.
Biochemistry 2000;39(31):9257-74.
2000: Chen X; McDowell J A; Kierzek R; Krugh T R; Turner D H
Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
Biochemistry 2000;39(30):8970-82.
2000: Disney M D; Testa S M; Turner D H
Targeting a Pneumocystis carinii group I intron with methylphosphonate oligonucleotides: backbone charge is not required for binding or reactivity.
Biochemistry 2000;39(23):6991-7000.
2000: Kierzek R; Steiger M A; Spinelli S L; Turner D H; Phizicky E M
The chemical synthesis of oligoribonucleotides with selectively placed 2'-O-phosphates.
Nucleosides, nucleotides & nucleic acids 2000;19(5-6):917-33.
1999: Testa S M; Disney M D; Turner D H; Kierzek R
Thermodynamics of RNA-RNA duplexes with 2- or 4-thiouridines: implications for antisense design and targeting a group I intron.
Biochemistry 1999;38(50):16655-62.
1999: Mathews D H; Burkard M E; Freier S M; Wyatt J R; Turner D H
Predicting oligonucleotide affinity to nucleic acid targets.
RNA (New York, N.Y.) 1999;5(11):1458-69.
1999: Kierzek R; Burkard M E; Turner D H
Thermodynamics of single mismatches in RNA duplexes.
Biochemistry 1999;38(43):14214-23.
1999: Burkard M E; Kierzek R; Turner D H
Thermodynamics of unpaired terminal nucleotides on short RNA helixes correlates with stacking at helix termini in larger RNAs.
Journal of molecular biology 1999;290(5):967-82.
1999: Mathews D H; Sabina J; Zuker M; Turner D H
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure.
Journal of molecular biology 1999;288(5):911-40.
1999: Testa S M; Gryaznov S M; Turner D H
In vitro suicide inhibition of self-splicing of a group I intron from Pneumocystis carinii by an N3' --> P5' phosphoramidate hexanucleotide.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(6):2734-9.
1999: Spinelli S L; Kierzek R; Turner D H; Phizicky E M
Transient ADP-ribosylation of a 2'-phosphate implicated in its removal from ligated tRNA during splicing in yeast.
The Journal of biological chemistry 1999;274(5):2637-44.
1999: Schroeder S J; Burkard M E; Turner D H
The energetics of small internal loops in RNA.
Biopolymers 1999;52(4):157-67.
1998: Xia T; SantaLucia J; Burkard M E; Kierzek R; Schroeder S J; Jiao X; Cox C; Turner D H
Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs.
Biochemistry 1998;37(42):14719-35.
1998: Testa S M; Gryaznov S M; Turner D H
Antisense binding enhanced by tertiary interactions: binding of phosphorothioate and N3'-->P5' phosphoramidate hexanucleotides to the catalytic core of a group I ribozyme from the mammalian pathogen Pneumocystis carinii.
Biochemistry 1998;37(26):9379-85.
1997: Testa S M; Haidaris C G; Gigliotti F; Turner D H
A Pneumocystis carinii group I intron ribozyme that does not require 2' OH groups on its 5' exon mimic for binding to the catalytic core.
Biochemistry 1997;36(49):15303-14.
1997: Xia T; McDowell J A; Turner D H
Thermodynamics of nonsymmetric tandem mismatches adjacent to G.C base pairs in RNA.
Biochemistry 1997;36(41):12486-97.
1997: Profenno L A; Kierzek R; Testa S M; Turner D H
Guanosine binds to the Tetrahymena ribozyme in more than one step, and its 2'-OH and the nonbridging pro-Sp phosphoryl oxygen at the cleavage site are required for productive docking.
Biochemistry 1997;36(41):12477-85.
1997: Carter R J; Baeyens K J; SantaLucia J; Turner D H; Holbrook S R
The crystal structure of an RNA oligomer incorporating tandem adenosine-inosine mismatches.
Nucleic acids research 1997;25(20):4117-22.
1997: Li Y; Turner D H
Effects of Mg2+ and the 2' OH of guanosine on steps required for substrate binding and reactivity with the Tetrahymena ribozyme reveal several local folding transitions.
Biochemistry 1997;36(37):11131-9.
1997: McDowell J A; He L; Chen X; Turner D H
Investigation of the structural basis for thermodynamic stabilities of tandem GU wobble pairs: NMR structures of (rGGAGUUCC)2 and (rGGAUGUCC)2.
Biochemistry 1997;36(26):8030-8.
1997: Wu M; SantaLucia J; Turner D H
Solution structure of (rGGCAGGCC)2 by two-dimensional NMR and the iterative relaxation matrix approach.
Biochemistry 1997;36(15):4449-60.
1997: Mathews D H; Banerjee A R; Luan D D; Eickbush T H; Turner D H
Secondary structure model of the RNA recognized by the reverse transcriptase from the R2 retrotransposable element.
RNA (New York, N.Y.) 1997;3(1):1-16.
1997: SantaLucia J; Turner D H
Measuring the thermodynamics of RNA secondary structure formation.
Biopolymers 1997;44(3):309-19.
1996: Schroeder S; Kim J; Turner D H
G.A and U.U mismatches can stabilize RNA internal loops of three nucleotides.
Biochemistry 1996;35(50):16105-9.
1996: McDowell J A; Turner D H
Investigation of the structural basis for thermodynamic stabilities of tandem GU mismatches: solution structure of (rGAGGUCUC)2 by two-dimensional NMR and simulated annealing.
Biochemistry 1996;35(45):14077-89.
1996: Kim J; Walter A E; Turner D H
Thermodynamics of coaxially stacked helixes with GA and CC mismatches.
Biochemistry 1996;35(43):13753-61.
1996: Wu M; Turner D H
Solution structure of (rGCGGACGC)2 by two-dimensional NMR and the iterative relaxation matrix approach.
Biochemistry 1996;35(30):9677-89.
1996: Turner D H
Thermodynamics of base pairing.
Current opinion in structural biology 1996;6(3):299-304.
1996: Fountain M A; Serra M J; Krugh T R; Turner D H
Structural features of a six-nucleotide RNA hairpin loop found in ribosomal RNA.
Biochemistry 1996;35(21):6539-48.
1996: Bevilacqua P C; Sugimoto N; Turner D H
A mechanistic framework for the second step of splicing catalyzed by the Tetrahymena ribozyme.
Biochemistry 1996;35(2):648-58.
1995: Li Y; Bevilacqua P C; Mathews D; Turner D H
Thermodynamic and activation parameters for binding of a pyrene-labeled substrate by the Tetrahymena ribozyme: docking is not diffusion-controlled and is driven by a favorable entropy change.
Biochemistry 1995;34(44):14394-9.
1995: Banerjee A R; Turner D H
The time dependence of chemical modification reveals slow steps in the folding of a group I ribozyme.
Biochemistry 1995;34(19):6504-12.
1995: Wu M; McDowell J A; Turner D H
A periodic table of symmetric tandem mismatches in RNA.
Biochemistry 1995;34(10):3204-11.
1995: Serra M J; Turner D H
Predicting thermodynamic properties of RNA.
Methods in enzymology 1995;259():242-61.
1994: Serra M J; Axenson T J; Turner D H
A model for the stabilities of RNA hairpins based on a study of the sequence dependence of stability for hairpins of six nucleotides.
Biochemistry 1994;33(47):14289-96.
1994: Walter A E; Turner D H
Sequence dependence of stability for coaxial stacking of RNA helixes with Watson-Crick base paired interfaces.
Biochemistry 1994;33(42):12715-9.
1994: Bevilacqua P C; Li Y; Turner D H
Fluorescence-detected stopped flow with a pyrene labeled substrate reveals that guanosine facilitates docking of the 5' cleavage site into a high free energy binding mode in the Tetrahymena ribozyme.
Biochemistry 1994;33(37):11340-8.
1994: Walter A E; Wu M; Turner D H
The stability and structure of tandem GA mismatches in RNA depend on closing base pairs.
Biochemistry 1994;33(37):11349-54.
1994: Walter A E; Turner D H; Kim J; Lyttle M H; Müller P; Mathews D H; Zuker M
Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(20):9218-22.
1993: SantaLucia J; Turner D H
Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics.
Biochemistry 1993;32(47):12612-23.
1993: Bevilacqua P C; Johnson K A; Turner D H
Cooperative and anticooperative binding to a ribozyme.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(18):8357-61.
1993: Serra M J; Lyttle M H; Axenson T J; Schadt C A; Turner D H
RNA hairpin loop stability depends on closing base pair.
Nucleic acids research 1993;21(16):3845-9.
1993: Culver G M; McCraith S M; Zillmann M; Kierzek R; Michaud N; LaReau R D; Turner D H; Phizicky E M
An NAD derivative produced during transfer RNA splicing: ADP-ribose 1"-2" cyclic phosphate.
Science (New York, N.Y.) 1993;261(5118):206-8.
1993: Moran S; Kierzek R; Turner D H
Binding of guanosine and 3' splice site analogues to a group I ribozyme: interactions with functional groups of guanosine and with additional nucleotides.
Biochemistry 1993;32(19):5247-56.
1993: Yoon K; Hobbs C A; Walter A E; Turner D H
Effect of a 5'-phosphate on the stability of triple helix.
Nucleic acids research 1993;21(3):601-6.
1993: Banerjee A R; Jaeger J A; Turner D H
Thermal unfolding of a group I ribozyme: the low-temperature transition is primarily disruption of tertiary structure.
Biochemistry 1993;32(1):153-63.
1992: Bevilacqua P C; Kierzek R; Johnson K A; Turner D H
Dynamics of ribozyme binding of substrate revealed by fluorescence-detected stopped-flow methods.
Science (New York, N.Y.) 1992;258(5086):1355-8.
1992: Kierzek R; He L; Turner D H
Association of 2'-5' oligoribonucleotides.
Nucleic acids research 1992;20(7):1685-90.
1992: SantaLucia J; Kierzek R; Turner D H
Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin.
Science (New York, N.Y.) 1992;256(5054):217-9.
1991: Bevilacqua P C; Turner D H
Comparison of binding of mixed ribose-deoxyribose analogues of CUCU to a ribozyme and to GGAGAA by equilibrium dialysis: evidence for ribozyme specific interactions with 2' OH groups.
Biochemistry 1991;30(44):10632-40.
1991: He L; Kierzek R; SantaLucia J; Walter A E; Turner D H
Nearest-neighbor parameters for G.U mismatches: [formula; see text] is destabilizing in the contexts [formula; see text] and [formula; see text] but stabilizing in [formula; see text].
Biochemistry 1991;30(46):11124-32.
1991: SantaLucia J; Kierzek R; Turner D H
Stabilities of consecutive A.C, C.C, G.G, U.C, and U.U mismatches in RNA internal loops: Evidence for stable hydrogen-bonded U.U and C.C.+ pairs.
Biochemistry 1991;30(33):8242-51.
1991: Peritz A E; Kierzek R; Sugimoto N; Turner D H
Thermodynamic study of internal loops in oligoribonucleotides: symmetric loops are more stable than asymmetric loops.
Biochemistry 1991;30(26):6428-36.
1991: Zuker M; Jaeger J A; Turner D H
A comparison of optimal and suboptimal RNA secondary structures predicted by free energy minimization with structures determined by phylogenetic comparison.
Nucleic acids research 1991;19(10):2707-14.
1990: Jaeger J A; Zuker M; Turner D H
Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate.
Biochemistry 1990;29(44):10147-58.
1990: SantaLucia J; Kierzek R; Turner D H
Effects of GA mismatches on the structure and thermodynamics of RNA internal loops.
Biochemistry 1990;29(37):8813-9.
1990: Longfellow C E; Kierzek R; Turner D H
Thermodynamic and spectroscopic study of bulge loops in oligoribonucleotides.
Biochemistry 1990;29(1):278-85.
1990: Jaeger J A; Turner D H; Zuker M
Predicting optimal and suboptimal secondary structure for RNA.
Methods in enzymology 1990;183():281-306.
1989: Jaeger J A; Turner D H; Zuker M
Improved predictions of secondary structures for RNA.
Proceedings of the National Academy of Sciences of the United States of America 1989;86(20):7706-10.
1989: Williams A P; Longfellow C E; Freier S M; Kierzek R; Turner D H
Laser temperature-jump, spectroscopic, and thermodynamic study of salt effects on duplex formation by dGCATGC.
Biochemistry 1989;28(10):4283-91.
1989: Sugimoto N; Tomka M; Kierzek R; Bevilacqua P C; Turner D H
Effects of substrate structure on the kinetics of circle opening reactions of the self-splicing intervening sequence from Tetrahymena thermophila: evidence for substrate and Mg2+ binding interactions.
Nucleic acids research 1989;17(1):355-71.
1988: Sugimoto N; Kierzek R; Turner D H
Kinetics for reaction of a circularized intervening sequence with CU, UCU, CUCU, and CUCUCU: mechanistic implications from the dependence on temperature and on oligomer and Mg2+ concentrations.
Biochemistry 1988;27(17):6384-92.
1987: Sugimoto N; Kierzek R; Turner D H
Sequence dependence for the energetics of terminal mismatches in ribooligonucleotides.
Biochemistry 1987;26(14):4559-62.
1987: Sugimoto N; Kierzek R; Turner D H
Sequence dependence for the energetics of dangling ends and terminal base pairs in ribonucleic acid.
Biochemistry 1987;26(14):4554-8.
1987: Turner D H; Sugimoto N; Jaeger J A; Longfellow C E; Freier S M; Kierzek R
Improved parameters for prediction of RNA structure.
Cold Spring Harbor symposia on quantitative biology 1987;52():123-33.
1986: Kierzek R; Caruthers M H; Longfellow C E; Swinton D; Turner D H; Freier S M
Polymer-supported RNA synthesis and its application to test the nearest-neighbor model for duplex stability.
Biochemistry 1986;25(24):7840-6.
1986: Freier S M; Kierzek R; Jaeger J A; Sugimoto N; Caruthers M H; Neilson T; Turner D H
Improved free-energy parameters for predictions of RNA duplex stability.
Proceedings of the National Academy of Sciences of the United States of America 1986;83(24):9373-7.
1986: Freier S M; Sugimoto N; Sinclair A; Alkema D; Neilson T; Kierzek R; Caruthers M H; Turner D H
Stability of XGCGCp, GCGCYp, and XGCGCYp helixes: an empirical estimate of the energetics of hydrogen bonds in nucleic acids.
Biochemistry 1986;25(11):3214-9.
1986: Freier S M; Kierzek R; Caruthers M H; Neilson T; Turner D H
Free energy contributions of G.U and other terminal mismatches to helix stability.
Biochemistry 1986;25(11):3209-13.
1986: Lamos M L; Walker G T; Krugh T R; Turner D H
Fluorescence-detected circular dichroism of ethidium bound to poly(dG-dC) and poly(dG-m5dC) under B- and Z-form conditions.
Biochemistry 1986;25(3):687-91.
1985: Freier S M; Sinclair A; Neilson T; Turner D H
Improved free energies for G.C base-pairs.
Journal of molecular biology 1985;185(3):645-7.
1985: Freier S M; Alkema D; Sinclair A; Neilson T; Turner D H
Contributions of dangling end stacking and terminal base-pair formation to the stabilities of XGGCCp, XCCGGp, XGGCCYp, and XCCGGYp helixes.
Biochemistry 1985;24(17):4533-9.
1985: Hickey D R; Turner D H
Effects of terminal mismatches on RNA stability: thermodynamics of duplex formation for ACCGGGp, ACCGGAp, and ACCGGCp.
Biochemistry 1985;24(15):3987-91.
1985: Hickey D R; Turner D H
Solvent effects on the stability of A7U7p.
Biochemistry 1985;24(8):2086-94.
1984: Freier S M; Petersheim M; Hickey D R; Turner D H
Thermodynamic studies of RNA stability.
Journal of biomolecular structure & dynamics 1984;1(5):1229-42.
1983: Petersheim M; Turner D H
Proton magnetic resonance melting studies of CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp.
Biochemistry 1983;22(2):269-77.
1983: Petersheim M; Turner D H
Nuclear overhauser studies of CCGGAp, ACCGGp, and ACCGGUp.
Biochemistry 1983;22(2):264-8.
1983: Petersheim M; Turner D H
Base-stacking and base-pairing contributions to helix stability: thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp.
Biochemistry 1983;22(2):256-63.

Sign-in to see more