FIND

researchers

DISCOVER

relevant articles

PROMOTE

your research

now for free

Itaru Urabe

Research Profile

Living Beings

Concepts & Ideas

Genes & Molecular Sequences

Chemicals & Drugs

Procedures

Directed Molecular Evolution

Physiology

Phenomena

Evolution, Molecular

Co-author Network

Publications

TOP 3
Kotaro Mori; Akiko Kashiwagi; Itaru Urabe; Tetsuya Yomo
Evolution of carrying capacity in evolution experiments focusing on a single locus on the Escherichia coli chromosome.
Koji Tsukada; Misato Okazaki; Hiroshi Kita; Yoshio Inokuchi; Itaru Urabe; Tetsuya Yomo
Quantitative analysis of the bacteriophage Qbeta infection cycle.
Hitoshi Toyota; Masato Hosokawa; Itaru Urabe; Tetsuya Yomo
Emergence of polyproline II-like structure at early stages of experimental evolution from random polypeptides.

Register for free to view:

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the research activity
of experts around the globe

Geonetwork of Itaru Urabe (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

All Publications

2009: Kotaro Mori; Akiko Kashiwagi; Itaru Urabe; Tetsuya Yomo
Evolution of carrying capacity in evolution experiments focusing on a single locus on the Escherichia coli chromosome.
Bio Systems 2009;95(2):114-9.
2009: Koji Tsukada; Misato Okazaki; Hiroshi Kita; Yoshio Inokuchi; Itaru Urabe; Tetsuya Yomo
Quantitative analysis of the bacteriophage Qbeta infection cycle.
Biochimica et biophysica acta 2009;1790(1):65-70.
2008: Hitoshi Toyota; Masato Hosokawa; Itaru Urabe; Tetsuya Yomo
Emergence of polyproline II-like structure at early stages of experimental evolution from random polypeptides.
Molecular biology and evolution 2008;25(6):1113-9.
2008: Akito Yamada; Shin-Ichi Matsuyama; Masahiko Todoriki; Akiko Kashiwagi; Itaru Urabe; Tetsuya Yomo
Phenotypic plasticity of Escherichia coli at initial stage of symbiosis with Dictyostelium discoideum.
Bio Systems 2008;92(1):1-9.
2008: Kazufumi Hosoda; Tomoaki Matsuura; Hiroshi Kita; Norikazu Ichihashi; Koji Tsukada; Itaru Urabe; Tetsuya Yomo
A novel sequence-specific RNA quantification method using nicking endonuclease, dual-labeled fluorescent DNA probe, and conformation-interchangeable oligo-DNA.
RNA (New York, N.Y.) 2008;14(3):584-92.
2007: Takuyo Aita; Yuuki Hayashi; Hitoshi Toyota; Yuzuru Husimi; Itaru Urabe; Tetsuya Yomo
Extracting characteristic properties of fitness landscape from in vitro molecular evolution: a case study on infectivity of fd phage to E.coli.
Journal of theoretical biology 2007;246(3):538-50.
2007: Toshihiro Nakashima; Hitoshi Toyota; Itaru Urabe; Tetsuya Yomo
Effective selection system for experimental evolution of random polypeptides towards DNA-binding protein.
Journal of bioscience and bioengineering 2007;103(2):155-60.
2007: Tomoaki Matsuura; Hayato Yanagida; Junya Ushioda; Itaru Urabe; Tetsuya Yomo
Nascent chain, mRNA, and ribosome complexes generated by a pure translation system.
Biochemical and biophysical research communications 2007;352(2):372-7.
2006: Takeshi Sunami; Kanetomo Sato; Tomoaki Matsuura; Koji Tsukada; Itaru Urabe; Tetsuya Yomo
Femtoliter compartment in liposomes for in vitro selection of proteins.
Analytical biochemistry 2006;357(1):128-36.
2006: Kanetomo Sato; Kei Obinata; Tadashi Sugawara; Itaru Urabe; Tetsuya Yomo
Quantification of structural properties of cell-sized individual liposomes by flow cytometry.
Journal of bioscience and bioengineering 2006;102(3):171-8.
2006: Hiroshi Kita; Junghwa Cho; Tomoaki Matsuura; Tomoyuki Nakaishi; Ichiro Taniguchi; Takehiko Ichikawa; Yasufumi Shima; Itaru Urabe; Tetsuya Yomo
Functional Qbeta replicase genetically fusing essential subunits EF-Ts and EF-Tu with beta-subunit.
Journal of bioscience and bioengineering 2006;101(5):421-6.
2006: Yuuki Hayashi; Takuyo Aita; Hitoshi Toyota; Yuzuru Husimi; Itaru Urabe; Tetsuya Yomo
Experimental rugged fitness landscape in protein sequence space.
PloS one 2006;1():e96.
2006: Akiko Kashiwagi; Itaru Urabe; Kunihiko Kaneko; Tetsuya Yomo
Adaptive response of a gene network to environmental changes by fitness-induced attractor selection.
PloS one 2006;1():e49.
2004: Takao Suzuki; Akiko Kashiwagi; Kotaro Mori; Itaru Urabe; Tetsuya Yomo
History dependent effects on phenotypic expression of a newly emerged gene.
Bio Systems 2004;77(1-3):137-41.
2004: Keitaro Ishikawa; Kanetomo Sato; Yasufumi Shima; Itaru Urabe; Tetsuya Yomo
Expression of a cascading genetic network within liposomes.
FEBS letters 2004;576(3):387-90.
2004: Shin-Ichi Matsuyama; Chikara Furusawa; Masahiko Todoriki; Itaru Urabe; Tetsuya Yomo
Global change in Escherichia coli gene expression in initial stage of symbiosis with Dictyostelium cells.
Bio Systems 2004;73(3):163-71.
2004: Yoichiro Ito; Toshihiro Kawama; Itaru Urabe; Tetsuya Yomo
Evolution of an arbitrary sequence in solubility.
Journal of molecular evolution 2004;58(2):196-202.
2004: Nobuhiko Tokuriki; Masataka Kinjo; Shigeru Negi; Masaru Hoshino; Yuji Goto; Itaru Urabe; Tetsuya Yomo
Protein folding by the effects of macromolecular crowding.
Protein science : a publication of the Protein Society 2004;13(1):125-33.
2003: Yuuki Hayashi; Hiroshi Sakata; Yoshihide Makino; Itaru Urabe; Tetsuya Yomo
Can an arbitrary sequence evolve towards acquiring a biological function?
Journal of molecular evolution 2003;56(2):162-8.
2002: Asao Yamauchi; Toshihiro Nakashima; Nobuhiko Tokuriki; Masato Hosokawa; Hideki Nogami; Shingo Arioka; Itaru Urabe; Tetsuya Yomo
Evolvability of random polypeptides through functional selection within a small library.
Protein engineering 2002;15(7):619-26.
2002: Tomoaki Matsuura; Muneyoshi Yamaguchi; Elizabeth P Ko-Mitamura; Yasufumi Shima; Itaru Urabe; Tetsuya Yomo
Importance of compartment formation for a self-encoding system.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(11):7514-7.
2002: Masahiko Todoriki; Shinya Oki; Shin-Ichi Matsuyama; Elizabeth P Ko-Mitamura; Itaru Urabe; Tetsuya Yomo
An observation of the initial stage towards a symbiotic relationship.
Bio Systems 2002;65(2-3):105-12.
2002: Tomoyuki Nakaishi; Kentaro Iio; Keizo Yamamoto; Itaru Urabe; Tetsuya Yomo
Kinetic properties of Qbeta replicase, an RNA dependent RNA polymerase.
Journal of bioscience and bioengineering 2002;93(3):322-7.
2002: Tomoaki Matsuura; Tetsuya Yomo; Itaru Urabe
Evolutionary molecular engineering by random elongation mutagenesis.
Methods in molecular biology (Clifton, N.J.) 2002;182():221-30.
2001: Akiko Kashiwagi; W Noumachi; M Katsuno; Taufiq Alam; Itaru Urabe; Tetsuya Yomo
Plasticity of fitness and diversification process during an experimental molecular evolution.
Journal of molecular evolution 2001;52(6):502-9.
2001: W Yu; Kanetomo Sato; M Wakabayashi; Tomoyuki Nakaishi; Elizabeth P Ko-Mitamura; Yasufumi Shima; Itaru Urabe; Tetsuya Yomo
Synthesis of functional protein in liposome.
Journal of bioscience and bioengineering 2001;92(6):590-3.
2001: Nobuhiko Tokuriki; K Sakamoto; D Waluyo; Y Makino; Kyoko Ogasahara; Katsuhide Yutani; Itaru Urabe; Tetsuya Yomo
Effects of amino acid substitution on the physicochemical properties of artificial proteins with random sequences.
Journal of bioscience and bioengineering 2001;92(2):167-72.
2000: Toshihiro Nakashima; N Ishiguro; M Yamaguchi; A Yamauchi; Yasufumi Shima; C Nozaki; Itaru Urabe; Tetsuya Yomo
Construction and characterization of phage libraries displaying artificial proteins with random sequences.
Journal of bioscience and bioengineering 2000;90(3):253-9.
1999: T Matsuura; Kiyoshi Miyai; S Trakulnaleamsai; Tetsuya Yomo; Y Shima; S Miki; K Yamamoto; Itaru Urabe
Evolutionary molecular engineering by random elongation mutagenesis.
Nature biotechnology 1999;17(1):58-61.
1998: Tetsuya Yomo; I D Prijambada; Kaoru Yamamoto; Y Shima; S Negoro; Itaru Urabe
Properties of artificial proteins with random sequences.
Annals of the New York Academy of Sciences 1998;864():131-5.
1998: Tomoaki Matsuura; Tetsuya Yomo; S Trakulnaleamsai; Y Ohashi; Koji Yamamoto; Itaru Urabe
Nonadditivity of mutational effects on the properties of catalase I and its application to efficient directed evolution.
Protein engineering 1998;11(9):789-95.
1998: A Yamauchi; Tetsuya Yomo; F Tanaka; I D Prijambada; S Ohhashi; Kazuaki Yamamoto; Yasufumi Shima; Kyoko Ogasahara; Katsuhide Yutani; M Kataoka; Itaru Urabe
Characterization of soluble artificial proteins with random sequences.
FEBS letters 1998;421(2):147-51.
1997: Tetsuya Yomo; T Yamano; K Yamamoto; Itaru Urabe
General equation of steady-state enzyme kinetics using net rate constants and its applicaiton to the kinetic analysis of catalase reaction.
Journal of theoretical biology 1997;188(3):301-12.
1997: C Kobayashi; Y Suga; Koji Yamamoto; Tetsuya Yomo; Kyoko Ogasahara; Katsuhide Yutani; Itaru Urabe
Thermal conversion from low- to high-activity forms of catalase I from Bacillus stearothermophilus.
The Journal of biological chemistry 1997;272(37):23011-6.
1996: T Arakawa; B Jongsareejit; Y Tatsumi; K Tanaka; K Ikeda; H Komatsubara; H Inoue; B Kawakami; M Oka; S Emi; Tetsuya Yomo; Y Shima; S Negoro; Itaru Urabe
Application of N-terminally truncated DNA polymerase from Thermus thermophilus (delta Tth polymerase) to DNA sequencing and polymerase chain reactions: comparative study of delta Tth and wild-type Tth polymerases.
DNA research : an international journal for rapid publication of reports on genes and genomes 1996;3(2):87-92.
1996: I D Prijambada; Tetsuya Yomo; F Tanaka; T Kawama; K Yamamoto; A Hasegawa; Y Shima; S Negoro; Itaru Urabe
Solubility of artificial proteins with random sequences.
FEBS letters 1996;382(1-2):21-5.
1995: K Kato; K Ohtsuki; Y Koda; T Maekawa; Tetsuya Yomo; S Negoro; Itaru Urabe
A plasmid encoding enzymes for nylon oligomer degradation: nucleotide sequence and analysis of pOAD2.
Microbiology (Reading, England) 1995;141 ( Pt 10)():2585-90.
1995: I D Prijambada; S Negoro; Tetsuya Yomo; Itaru Urabe
Emergence of nylon oligomer degradation enzymes in Pseudomonas aeruginosa PAO through experimental evolution.
Applied and environmental microbiology 1995;61(5):2020-2.
1994: Tetsuya Yomo; Itaru Urabe
A frame-specific symmetry of complementary strands of DNA suggests the existence of genes on the antisense strand.
Journal of molecular evolution 1994;38(2):113-20.
1994: K Kato; K Ohtsuki; H Mitsuda; Tetsuya Yomo; S Negoro; Itaru Urabe
Insertion sequence IS6100 on plasmid pOAD2, which degrades nylon oligomers.
Journal of bacteriology 1994;176(4):1197-200.
1993: S Kakudo; S Negoro; Itaru Urabe; H Okada
Nylon oligomer degradation gene, nylC, on plasmid pOAD2 from a Flavobacterium strain encodes endo-type 6-aminohexanoate oligomer hydrolase: purification and characterization of the nylC gene product.
Applied and environmental microbiology 1993;59(11):3978-80.
1993: K Kanagawa; M Oishi; S Negoro; Itaru Urabe; H Okada
Characterization of the 6-aminohexanoate-dimer hydrolase from Pseudomonas sp. NK87.
Journal of general microbiology 1993;139(4):787-95.
1993: A Arase; Tetsuya Yomo; Itaru Urabe; Y Hata; Y Katsube; H Okada
Stabilization of xylanase by random mutagenesis.
FEBS letters 1993;316(2):123-7.
1992: S Negoro; S Kakudo; Itaru Urabe; H Okada
A new nylon oligomer degradation gene (nylC) on plasmid pOAD2 from a Flavobacterium sp.
Journal of bacteriology 1992;174(24):7948-53.
1992: E P Ko; H Akatsuka; H Moriyama; A Shinmyo; Yoshio Hata; Y Katsube; Itaru Urabe; H Okada
Site-directed mutagenesis at aspartate and glutamate residues of xylanase from Bacillus pumilus.
The Biochemical journal 1992;288 ( Pt 1)():117-21.
1992: T Mitamura; Ryo Iwamoto; Toshiyuki Umata; Tetsuya Yomo; Itaru Urabe; Makoto Tsuneoka; Eisuke Mekada
The 27-kD diphtheria toxin receptor-associated protein (DRAP27) from vero cells is the monkey homologue of human CD9 antigen: expression of DRAP27 elevates the number of diphtheria toxin receptors on toxin-sensitive cells.
The Journal of cell biology 1992;118(6):1389-99.
1992: T Nagao; T Mitamura; X H Wang; S Negoro; Tetsuya Yomo; Itaru Urabe; H Okada
Cloning, nucleotide sequences, and enzymatic properties of glucose dehydrogenase isozymes from Bacillus megaterium IAM1030.
Journal of bacteriology 1992;174(15):5013-20.
1992: Tetsuya Yomo; Itaru Urabe; H Okada
No stop codons in the antisense strands of the genes for nylon oligomer degradation.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(9):3780-4.
1992: Tetsuya Yomo; Itaru Urabe; H Okada
Principles for designing enzyme-like catalysts based on the rate-acceleration mechanisms of semisynthetic oxidases.
European journal of biochemistry / FEBS 1992;203(3):543-50.
1992: Tetsuya Yomo; Itaru Urabe; H Okada
Preparation and kinetic properties of 5-ethylphenazine-lactate-dehydrogenase-NAD+ conjugate, a semisynthetic lactate oxidase showing a hide-and-seek effect.
European journal of biochemistry / FEBS 1992;203(3):533-42.
1991: W Z Xu; Y Shima; S Negoro; Itaru Urabe
Sequence and properties of beta-xylosidase from Bacillus pumilus IPO. Contradiction of the previous nucleotide sequence.
European journal of biochemistry / FEBS 1991;202(3):1197-203.
1991: Tetsuya Yomo; Itaru Urabe; H Okada
Preparation and kinetic properties of 5-ethylphenazine-glucose-dehydrogenase-NAD+ conjugate, a semisynthetic glucose oxidase.
European journal of biochemistry / FEBS 1991;200(3):759-66.
1991: K Kato; K Fujiyama; H S Hatanaka; I D Priyambada; S Negoro; Itaru Urabe; H Okada
Amino acid alterations essential for increasing the catalytic activity of the nylon-oligomer-degradation enzyme of Flavobacterium sp.
European journal of biochemistry / FEBS 1991;200(1):165-9.
1991: Tetsuya Yomo; Itaru Urabe; H Okada
Preparation and kinetic properties of 5-ethylphenazine-poly(ethylene-glycol)-glutamate-dehydrogenase conjugate. A semisynthetic NADH oxidase.
European journal of biochemistry / FEBS 1991;196(2):343-8.
1990: Tetsuya Yomo; Itaru Urabe; H Okada
Electrostatic and redox potential effects on the rat of electron-transfer reaction of nicotinamide adenine dinucleotides with 1-substituted 5-ethylphenazines.
Biochimica et biophysica acta 1990;1017(2):139-42.
1990: K Yamamoto; T Nagao; Y Makino; Itaru Urabe; H Okada
Characterization of mutant glucose dehydrogenases with increasing stability.
Annals of the New York Academy of Sciences 1990;613():362-5.
1989: T Mitamura; Itaru Urabe; H Okada
Enzymatic properties of isozymes and variants of glucose dehydrogenase from Bacillus megaterium.
European journal of biochemistry / FEBS 1989;186(1-2):389-93.
1989: T Nagao; Y Makino; K Yamamoto; Itaru Urabe; H Okada
Stability-increasing mutants of glucose dehydrogenase.
FEBS letters 1989;253(1-2):113-6.
1989: Tetsuya Yomo; Itaru Urabe; H Okada
Enzymatic method for measuring the absolute value of oxygen concentration.
Analytical biochemistry 1989;179(1):124-6.
1989: Y Makino; S Negoro; Itaru Urabe; H Okada
Stability-increasing mutants of glucose dehydrogenase from Bacillus megaterium IWG3.
The Journal of biological chemistry 1989;264(11):6381-5.
1989: Kazuo Kobayashi; S Doi; S Negoro; Itaru Urabe; H Okada
Structure and properties of malic enzyme from Bacillus stearothermophilus.
The Journal of biological chemistry 1989;264(6):3200-5.
1989: Tetsuya Yomo; H Sawai; Itaru Urabe; H Okada
Preparation and kinetic properties of 5-ethylphenazine-poly(ethylene glycol)-NAD+ conjugate, a unique catalyst having an intramolecular reaction step.
European journal of biochemistry / FEBS 1989;179(2):299-305.
1989: Tetsuya Yomo; H Sawai; Itaru Urabe; Yasuhiro Yamada; H Okada
Synthesis and characterization of 1-substituted 5-alkylphenazine derivatives carrying functional groups.
European journal of biochemistry / FEBS 1989;179(2):293-8.