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Jan Roelof van der Meer

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Fernando Cortés-Salazar; Siham Beggah; Jan Roelof van der Meer; Hubert H Girault
Electrochemical As(III) whole-cell based biochip sensor.
Vladimir Sentchilo; Kerrie Barry; Alexander Goessmann; Susannah Green Tringe; Lionel Guy; Stephanie Malfatti; Antonia P Mayer; Ryo Miyazaki; Marc Robinson-Rechavi; Jan Roelof van der Meer
Community-wide plasmid gene mobilization and selection.
Kamila Czechowska; Sylvain Rey; Vladimir Sentchilo; Markus Seyfried; Siham Beggah; Jan Roelof van der Meer
Examining chemical compound biodegradation at low concentrations through bacterial cell proliferation.

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2013: Fernando Cortés-Salazar; Siham Beggah; Jan Roelof van der Meer; Hubert H Girault
Electrochemical As(III) whole-cell based biochip sensor.
Biosensors & bioelectronics 2013;47():237-42.
2013: Vladimir Sentchilo; Kerrie Barry; Alexander Goessmann; Susannah Green Tringe; Lionel Guy; Stephanie Malfatti; Antonia P Mayer; Ryo Miyazaki; Marc Robinson-Rechavi; Jan Roelof van der Meer
Community-wide plasmid gene mobilization and selection.
The ISME journal 2013;7(6):1173-86.
2013: Kamila Czechowska; Sylvain Rey; Vladimir Sentchilo; Markus Seyfried; Siham Beggah; Jan Roelof van der Meer
Examining chemical compound biodegradation at low concentrations through bacterial cell proliferation.
Environmental science & technology 2013;47(4):1913-21.
2013: Friedrich Reinhard; Ryo Miyazaki; Nicolas Pradervand; Jan Roelof van der Meer
Cell differentiation to "mating bodies" induced by an integrating and conjugative element in free-living bacteria.
Current biology : CB 2013;23(3):255-9.
2012: Tekle Tafese Fida; Hermann J Heipieper; Johan Hofkens; David R Johnson; Rob Lavigne; Antonia P Mayer; Philip Breugelmans; Edith Coronado; Jan Roelof van der Meer; Dirk Springael
Exposure to solute stress affects genome-wide expression but not the polycyclic aromatic hydrocarbon-degrading activity of Sphingomonas sp. strain LH128 in biofilms.
Applied and environmental microbiology 2012;78(23):8311-20.
2012: Konrad Siegfried; Jan Roelof van der Meer; Anke Kuppardt; Jürgen Mattusch; Abul Fateh Md Khaled Bhuiyan; Antonis Chatzinotas; Carola Endes; Hauke Harms
Field testing of arsenic in groundwater samples of Bangladesh using a test kit based on lyophilized bioreporter bacteria.
Environmental science & technology 2012;46(6):3281-7.
2012: Kamila Czechowska; Jan Roelof van der Meer
Reversible and irreversible pollutant-induced bacterial cellular stress effects measured by ethidium bromide uptake and efflux.
Environmental science & technology 2012;46(2):1201-8.
2012: Edith Coronado; David R Johnson; Clémence Roggo; Jan Roelof van der Meer
Genome-Wide Analysis of Salicylate and Dibenzofuran Metabolism in Sphingomonas Wittichii RW1.
Frontiers in microbiology 2012;3():300.
2012: Ryo Miyazaki; Nicolas Pradervand; Friedrich Reinhard; Sandra Sulser; Marco Minoia; Jan Roelof van der Meer
Cellular variability of RpoS expression underlies subpopulation activation of an integrative and conjugative element.
PLoS genetics 2012;8(7):e1002818.
2011: Rekha Kumari; Rebecca Rutler; Robin Tecon; J Samuel Arey; Siham Beggah; Jan Roelof van der Meer
Development of bioreporter assays for the detection of bioavailability of long-chain alkanes based on the marine bacterium Alcanivorax borkumensis strain SK2.
Environmental microbiology 2011;13(10):2808-19.
2011: Nina Buffi; Davide Merulla; Philippe Renaud; Fanny Barbaud; Siham Beggah; Julien Beutier; Harald van Lintel; Jan Roelof van der Meer
Miniaturized bacterial biosensor system for arsenic detection holds great promise for making integrated measurement device.
Bioengineered bugs 2011;2(5):296-8.
2011: Kamila Czechowska; Jan Roelof van der Meer
A flow cytometry based oligotrophic pollutant exposure test to detect bacterial growth inhibition and cell injury.
Environmental science & technology 2011;45(13):5820-7.
2011: Ryo Miyazaki; Jan Roelof van der Meer
A dual functional origin of transfer in the ICEclc genomic island of Pseudomonas knackmussii B13.
Molecular microbiology 2011;79(3):743-58.
2011: Tekle Tafese Fida; Philip Breugelmans; Rob Lavigne; Edith Coronado; Dave Johnson; Jan Roelof van der Meer; Antonia Mayer; Johan Hofkens; Dirk Springael
Transcriptomic analysis of phenanthrene degrading Sphingomonas biofilms exposed to environmentally relevant solute and matric stresses.
Communications in agricultural and applied biological sciences 2011;76(1):69-72.
2011: Christelle Vogne; Hansi Bisht; Sagrario Arias; Sofia Fraile; Rup Lal; Jan Roelof van der Meer
Characterisation of the putative effector interaction site of the regulatory HbpR protein from Pseudomonas azelaica by site-directed mutagenesis.
PloS one 2011;6(2):e16539.
2010: Jan Roelof van der Meer; Shimshon Belkin
Where microbiology meets microengineering: design and applications of reporter bacteria.
Nature reviews. Microbiology 2010;8(7):511-22.
2010: Jan Roelof van der Meer
Let the sun shine.
Current opinion in biotechnology 2010;21(3):235-7.
2010: Tanja R Scheublin; Ian R Sanders; Christoph Keel; Jan Roelof van der Meer
Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi.
The ISME journal 2010;4(6):752-63.
2010: Robin Tecon; Siham Beggah; Kamila Czechowska; Vladimir Sentchilo; Panagiota-Myrsini Chronopoulou; Terry J McGenity; Jan Roelof van der Meer
Development of a multistrain bacterial bioreporter platform for the monitoring of hydrocarbon contaminants in marine environments.
Environmental science & technology 2010;44(3):1049-55.
2010: Muriel Gaillard; Nicolas Pradervand; Marco Minoia; Vladimir Sentchilo; David R Johnson; Jan Roelof van der Meer
Transcriptome analysis of the mobile genome ICEclc in Pseudomonas knackmussii B13.
BMC microbiology 2010;10():153.
2010: Robin Tecon; Jan Roelof van der Meer
Effect of two types of biosurfactants on phenanthrene availability to the bacterial bioreporter Burkholderia sartisoli strain RP037.
Applied microbiology and biotechnology 2010;85(4):1131-9.
2009: Robin Tecon; Olivier Binggeli; Jan Roelof van der Meer
Double-tagged fluorescent bacterial bioreporter for the study of polycyclic aromatic hydrocarbon diffusion and bioavailability.
Environmental microbiology 2009;11(9):2271-83.
2009: Halambage Upul Deepthike; Robin Tecon; Gerry Van Kooten; Jan Roelof van der Meer; Hauke Harms; Mona Wells; Jeffrey Short
Unlike PAHs from Exxon Valdez crude oil, PAHs from Gulf of Alaska coals are not readily bioavailable.
Environmental science & technology 2009;43(15):5864-70.
2009: David R Johnson; Kamila Czechowska; Nathalie Chèvre; Jan Roelof van der Meer
Toxicity of triclosan, penconazole and metalaxyl on Caulobacter crescentus and a freshwater microbial community as assessed by flow cytometry.
Environmental microbiology 2009;11(7):1682-91.
2009: Vladimir Sentchilo; Kamila Czechowska; Nicolas Pradervand; Marco Minoia; Ryo Miyazaki; Jan Roelof van der Meer
Intracellular excision and reintegration dynamics of the ICEclc genomic island of Pseudomonas knackmussii sp. strain B13.
Molecular microbiology 2009;72(5):1293-306.
2009: Elizabeth Diesel; Madeline Schreiber; Jan Roelof van der Meer
Development of bacteria-based bioassays for arsenic detection in natural waters.
Analytical and bioanalytical chemistry 2009;394(3):687-93.
2009: Pieter van Dillewijn; Hideaki Nojiri; Jan Roelof van der Meer; Thomas K Wood
Bioremediation, a broad perspective.
Microbial biotechnology 2009;2(2):125-7.
2009: Anke Kuppardt; Antonis Chatzinotas; Uta Breuer; Jan Roelof van der Meer; Hauke Harms
Optimization of preservation conditions of As (III) bioreporter bacteria.
Applied microbiology and biotechnology 2009;82(4):785-92.
2009: Mario Juhas; Jan Roelof van der Meer; Muriel Gaillard; Rosalind M Harding; Derek W Hood; Derrick W Crook
Genomic islands: tools of bacterial horizontal gene transfer and evolution.
FEMS microbiology reviews 2009;33(2):376-93.
2009: Ceri Lewis; Siham Beggah; Chris Pook; Carlos Guitart; Clare Redshaw; Jan Roelof van der Meer; James W Readman; Tamara S Galloway
Novel use of a whole cell E. coli bioreporter as a urinary exposure biomarker.
Environmental science & technology 2009;43(2):423-8.
2008: Marco Minoia; Muriel Gaillard; Friedrich Reinhard; Milos Stojanov; Vladimir Sentchilo; Jan Roelof van der Meer
Stochasticity and bistability in horizontal transfer control of a genomic island in Pseudomonas.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(52):20792-7.
2008: Stefanie Kohlmeier; Matthew Mancuso; Upul Deepthike; Robin Tecon; Jan Roelof van der Meer; Hauke Harms; Mona Wells
Comparison of naphthalene bioavailability determined by whole-cell biosensing and availability determined by extraction with Tenax.
Environmental pollution (Barking, Essex : 1987) 2008;156(3):803-8.
2008: Christoph Meier; Bernhard Wehrli; Jan Roelof van der Meer
Seasonal fluctuations of bacterial community diversity in agricultural soil and experimental validation by laboratory disturbance experiments.
Microbial ecology 2008;56(2):210-22.
2008: Kamila Czechowska; David Johnson; Jan Roelof van der Meer
Use of flow cytometric methods for single-cell analysis in environmental microbiology.
Current opinion in microbiology 2008;11(3):205-12.
2008: Muriel Gaillard; Nataskha Pernet; Christelle Vogne; Otto Hagenbüchle; Jan Roelof van der Meer
Host and invader impact of transfer of the clc genomic island into Pseudomonas aeruginosa PAO1.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(19):7058-63.
2008: Anke Wackwitz; Hauke Harms; Antonis Chatzinotas; Uta Breuer; Christelle Vogne; Jan Roelof van der Meer
Internal arsenite bioassay calibration using multiple bioreporter cell lines.
Microbial biotechnology 2008;1(2):149-57.
2008: Elke Vanlaere; Jan Roelof van der Meer; Enevold Falsen; Joana Falcao Salles; Evie De Brandt; Peter Vandamme
Burkholderia sartisoli sp. nov., isolated from a polycyclic aromatic hydrocarbon-contaminated soil.
International journal of systematic and evolutionary microbiology 2008;58(Pt 2):420-3.
2008: Vishakha Raina; Mrutyunjay Suar; Ajaib Singh; Om Prakash; Mandeep Dadhwal; Sanjay Kumar Gupta; Charu Dogra; Kirsten Lawlor; Sukanya Lal; Jan Roelof van der Meer; Christof Holliger; Rup Lal
Enhanced biodegradation of hexachlorocyclohexane (HCH) in contaminated soils via inoculation with Sphingobium indicum B90A.
Biodegradation 2008;19(1):27-40.
2008: Siham Beggah; Christelle Vogne; Elena Zenaro; Jan Roelof van der Meer
Mutant HbpR transcription activator isolation for 2-chlorobiphenyl via green fluorescent protein-based flow cytometry and cell sorting.
Microbial biotechnology 2008;1(1):68-78.
2007: Barbara Baumann; Jan Roelof van der Meer
Analysis of bioavailable arsenic in rice with whole cell living bioreporter bacteria.
Journal of agricultural and food chemistry 2007;55(6):2115-20.
2007: Stefanie Kohlmeier; Matthew Mancuso; Robin Tecon; Hauke Harms; Jan Roelof van der Meer; Mona Wells
Bioreporters: gfp versus lux revisited and single-cell response.
Biosensors & bioelectronics 2007;22(8):1578-85.
2006: Tina A Mueller; Thomas Fleischmann; Jan Roelof van der Meer; Hans-Peter E Kohler
Purification and characterization of two enantioselective alpha-ketoglutarate-dependent dioxygenases, RdpA and SdpA, from Sphingomonas herbicidovorans MH.
Applied and environmental microbiology 2006;72(7):4853-61.
2006: Debarati Paul; Gunjan Pandey; Christoph Meier; Jan Roelof van der Meer; Rakesh K Jain
Bacterial community structure of a pesticide-contaminated site and assessment of changes induced in community structure during bioremediation.
FEMS microbiology ecology 2006;57(1):116-27.
2006: Robin Tecon; Mona Wells; Jan Roelof van der Meer
A new green fluorescent protein-based bacterial biosensor for analysing phenanthrene fluxes.
Environmental microbiology 2006;8(4):697-708.
2006: Hauke Harms; Mona C Wells; Jan Roelof van der Meer
Whole-cell living biosensors--are they ready for environmental application?
Applied microbiology and biotechnology 2006;70(3):273-80.
2006: Muriel Gaillard; Tatiana Vallaeys; Frank-Jörg Vorhölter; Marco Minoia; Christoph Werlen; Vladimir Sentchilo; Alfred Pühler; Jan Roelof van der Meer
The clc element of Pseudomonas sp. strain B13, a genomic island with various catabolic properties.
Journal of bacteriology 2006;188(5):1999-2013.
2006: Jan Roelof van der Meer
Analytics with engineered bacterial bioreporter strains and systems.
Current opinion in biotechnology 2006;17(1):1-3.
2006: Robin Tecon; Jan Roelof van der Meer
Information from single-cell bacterial biosensors: what is it good for?
Current opinion in biotechnology 2006;17(1):4-10.
2005: Mrutyunjay Suar; Andrea Hauser; Thomas Poiger; Hans-Rudolf Buser; Markus D Müller; Charu Dogra; Vishakha Raina; Christof Holliger; Jan Roelof van der Meer; Rup Lal; Hans-Peter E Kohler
Enantioselective transformation of alpha-hexachlorocyclohexane by the dehydrochlorinases LinA1 and LinA2 from the soil bacterium Sphingomonas paucimobilis B90A.
Applied and environmental microbiology 2005;71(12):8514-8.
2005: Pham Thi Kim Trang; Michael Berg; Pham Hung Viet; Nguyen Van Mui; Jan Roelof van der Meer
Bacterial bioassay for rapid and accurate analysis of arsenic in highly variable groundwater samples.
Environmental science & technology 2005;39(19):7625-30.
2005: Mona Wells; Michael Gösch; Rudolf Rigler; Hauke Harms; Theo Lasser; Jan Roelof van der Meer
Ultrasensitive reporter protein detection in genetically engineered bacteria.
Analytical chemistry 2005;77(9):2683-9.
2005: David Tropel; Jan Roelof van der Meer
Characterization of HbpR binding by site-directed mutagenesis of its DNA-binding site and by deletion of the effector domain.
The FEBS journal 2005;272(7):1756-66.
2004: Mrutyunjay Suar; Jan Roelof van der Meer; Kirsten Lawlor; Christof Holliger; Rup Lal
Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers.
Applied and environmental microbiology 2004;70(11):6650-6.
2004: David Tropel; Alexandra Bähler; Kathrin Globig; Jan Roelof van der Meer
Design of new promoters and of a dual-bioreporter based on cross-activation by the two regulatory proteins XylR and HbpR.
Environmental microbiology 2004;6(11):1186-96.
2004: Tina A Mueller; Steven M Byrde; Christoph Werlen; Jan Roelof van der Meer; Hans-Peter E Kohler
Genetic analysis of phenoxyalkanoic acid degradation in Sphingomonas herbicidovorans MH.
Applied and environmental microbiology 2004;70(10):6066-75.
2004: Jan Roelof van der Meer; David Tropel; Marco C M Jaspers
Illuminating the detection chain of bacterial bioreporters.
Environmental microbiology 2004;6(10):1005-20.
2004: David Tropel; Jan Roelof van der Meer
Bacterial transcriptional regulators for degradation pathways of aromatic compounds.
Microbiology and molecular biology reviews : MMBR 2004;68(3):474-500, table of contents.
2004: Charu Dogra; Vishakha Raina; Rinku Pal; Mrutyunjay Suar; Sukanya Lal; Karl-Heinz Gartemann; Christof Holliger; Jan Roelof van der Meer; Rup Lal
Organization of lin genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: evidence for horizontal gene transfer.
Journal of bacteriology 2004;186(8):2225-35.
2004: Caroline M Laemmli; Christoph Werlen; Jan Roelof van der Meer
Mutation analysis of the different tfd genes for degradation of chloroaromatic compounds in Ralstonia eutropha JMP134.
Archives of microbiology 2004;181(2):112-21.
2004: Christoph Werlen; Marco C M Jaspers; Jan Roelof van der Meer
Measurement of biologically available naphthalene in gas and aqueous phases by use of a Pseudomonas putida biosensor.
Applied and environmental microbiology 2004;70(1):43-51.
2003: Judith Stocker; Denisa Balluch; Monika Gsell; Hauke Harms; Jessika Feliciano; Sylvia Daunert; Khurseed A Malik; Jan Roelof van der Meer
Development of a set of simple bacterial biosensors for quantitative and rapid measurements of arsenite and arsenate in potable water.
Environmental science & technology 2003;37(20):4743-50.
2003: Hans Peter Füchslin; Irene Rüegg; Jan Roelof van der Meer; Thomas Egli
Effect of integration of a GFP reporter gene on fitness of Ralstonia eutropha during growth with 2,4-dichlorophenoxyacetic acid.
Environmental microbiology 2003;5(10):878-87.
2003: Vladimir Sentchilo; Roald Ravatn; Christoph Werlen; Alexander J B Zehnder; Jan Roelof van der Meer
Unusual integrase gene expression on the clc genomic island in Pseudomonas sp. strain B13.
Journal of bacteriology 2003;185(15):4530-8.
2003: Vladimir Sentchilo; Alexander J B Zehnder; Jan Roelof van der Meer
Characterization of two alternative promoters for integrase expression in the clc genomic island of Pseudomonas sp. strain B13.
Molecular microbiology 2003;49(1):93-104.
2003: Jan Roelof van der Meer; Vladimir Sentchilo
Genomic islands and the evolution of catabolic pathways in bacteria.
Current opinion in biotechnology 2003;14(3):248-54.
2003: Konrad Egli; Christian Langer; Hansruedi Siegrist; Alexander J B Zehnder; Michael Wagner; Jan Roelof van der Meer
Community analysis of ammonia and nitrite oxidizers during start-up of nitritation reactors.
Applied and environmental microbiology 2003;69(6):3213-22.
2003: Konrad Egli; F Bosshard; Christoph Werlen; P Lais; Hansruedi Siegrist; Alexander J B Zehnder; Jan Roelof van der Meer
Microbial composition and structure of a rotating biological contactor biofilm treating ammonium-rich wastewater without organic carbon.
Microbial ecology 2003;45(4):419-32.
2003: Tina A Mueller; Christoph Werlen; Jim Spain; Jan Roelof van der Meer
Evolution of a chlorobenzene degradative pathway among bacteria in a contaminated groundwater mediated by a genomic island in Ralstonia.
Environmental microbiology 2003;5(3):163-73.
2002: Rekha Kumari; Sanjukta Subudhi; Mrutyunjay Suar; Gauri Dhingra; Vishakha Raina; Charu Dogra; Sukanya Lal; Jan Roelof van der Meer; Christof Holliger; Rup Lal
Cloning and characterization of lin genes responsible for the degradation of Hexachlorocyclohexane isomers by Sphingomonas paucimobilis strain B90.
Applied and environmental microbiology 2002;68(12):6021-8.
2002: Caroline M Laemmli; René Schönenberger; Marc Suter; Alexander J B Zehnder; Jan Roelof van der Meer
TfdD(II), one of the two chloromuconate cycloisomerases of Ralstonia eutropha JMP134 (pJP4), cannot efficiently convert 2-chloro- cis, cis-muconate to trans-dienelactone to allow growth on 3-chlorobenzoate.
Archives of microbiology 2002;178(1):13-25.
2002: David Tropel; Jan Roelof van der Meer
Identification and physical characterization of the HbpR binding sites of the hbpC and hbpD promoters.
Journal of bacteriology 2002;184(11):2914-24.
2002: Dirk Springael; Kurt Peys; Annemie Ryngaert; Sandra Van Roy; Liliane Hooyberghs; Roald Ravatn; Marc Heyndrickx; Jan Roelof van der Meer; Carlo Vandecasteele; Max Mergeay; Ludo Diels
Community shifts in a seeded 3-chlorobenzoate degrading membrane biofilm reactor: indications for involvement of in situ horizontal transfer of the clc-element from inoculum to contaminant bacteria.
Environmental microbiology 2002;4(2):70-80.
2001: Marco C M Jaspers; C Meier; Alexander J B Zehnder; Hauke Harms; Jan Roelof van der Meer
Measuring mass transfer processes of octane with the help of an alkSalkB::gfp-tagged Escherichia coli.
Environmental microbiology 2001;3(8):512-24.
2001: Marco C M Jaspers; Mark H.J. Sturme; Jan Roelof van der Meer
Unusual location of two nearby pairs of upstream activating sequences for HbpR, the main regulatory protein for the 2-hydroxybiphenyl degradation pathway of "Pseudomonas azelaica" HBP1.
Microbiology (Reading, England) 2001;147(Pt 8):2183-94.
2001: H Raschke; M Meier; J G Burken; Roland Hany; Markus D Müller; Jan Roelof van der Meer; Hans-Peter E Kohler
Biotransformation of various substituted aromatic compounds to chiral dihydrodihydroxy derivatives.
Applied and environmental microbiology 2001;67(8):3333-9.
2001: Konrad Egli; U Fanger; P J Alvarez; Hansruedi Siegrist; Jan Roelof van der Meer; Alexander J B Zehnder
Enrichment and characterization of an anammox bacterium from a rotating biological contactor treating ammonium-rich leachate.
Archives of microbiology 2001;175(3):198-207.
2001: Jan Roelof van der Meer; Roald Ravatn; Vladimir Sentchilo
The clc element of Pseudomonas sp. strain B13 and other mobile degradative elements employing phage-like integrases.
Archives of microbiology 2001;175(2):79-85.
2000: Caroline M Laemmli; JH Leveau; Alexander J B Zehnder; Jan Roelof van der Meer
Characterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4).
Journal of bacteriology 2000;182(15):4165-72.
2000: Vladimir Sentchilo; A N Perebituk; Alexander J B Zehnder; Jan Roelof van der Meer
Molecular diversity of plasmids bearing genes that encode toluene and xylene metabolism in Pseudomonas strains isolated from different contaminated sites in Belarus.
Applied and environmental microbiology 2000;66(7):2842-52.
2000: Marco C M Jaspers; WA Suske; Andreas Schmid; D A Goslings; Hans-Peter E Kohler; Jan Roelof van der Meer
HbpR, a new member of the XylR/DmpR subclass within the NtrC family of bacterial transcriptional activators, regulates expression of 2-hydroxybiphenyl metabolism in Pseudomonas azelaica HBP1.
Journal of bacteriology 2000;182(2):405-17.
1999: H Raschke; Thomas Fleischmann; Jan Roelof van der Meer; Hans-Peter E Kohler
cis-chlorobenzene dihydrodiol dehydrogenase (TcbB) from Pseudomonas sp. strain P51, expressed in Escherichia coli DH5alpha(pTCB149), catalyzes enantioselective dehydrogenase reactions.
Applied and environmental microbiology 1999;65(12):5242-6.
1999: R P Hesselmann; Christoph Werlen; D Hahn; Jan Roelof van der Meer; Alexander J B Zehnder
Enrichment, phylogenetic analysis and detection of a bacterium that performs enhanced biological phosphate removal in activated sludge.
Systematic and applied microbiology 1999;22(3):454-65.
1999: JH Leveau; F König; Hans Peter Füchslin; Christoph Werlen; Jan Roelof van der Meer
Dynamics of multigene expression during catabolic adaptation of Ralstonia eutropha JMP134 (pJP4) to the herbicide 2, 4-dichlorophenoxyacetate.
Molecular microbiology 1999;33(2):396-406.
1999: R Tchelet; R Meckenstock; P Steinle; Jan Roelof van der Meer
Population dynamics of an introduced bacterium degrading chlorinated benzenes in a soil column and in sewage sludge.
Biodegradation 1999;10(2):113-25.
1998: Roald Ravatn; S Studer; Alexander J B Zehnder; Jan Roelof van der Meer
Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. Strain B13.
Journal of bacteriology 1998;180(21):5505-14.
1998: R Meckenstock; P Steinle; Jan Roelof van der Meer; M Snozzi
Quantification of bacterial mRNA involved in degradation of 1,2,4-trichlorobenzene by Pseudomonas sp. strain P51 from liquid culture and from river sediment by reverse transcriptase PCR (RT/PCR).
FEMS microbiology letters 1998;167(2):123-9.
1998: Roald Ravatn; S Studer; Dirk Springael; Alexander J B Zehnder; Jan Roelof van der Meer
Chromosomal integration, tandem amplification, and deamplification in Pseudomonas putida F1 of a 105-kilobase genetic element containing the chlorocatechol degradative genes from Pseudomonas sp. Strain B13.
Journal of bacteriology 1998;180(17):4360-9.
1998: Roald Ravatn; Alexander J B Zehnder; Jan Roelof van der Meer
Low-frequency horizontal transfer of an element containing the chlorocatechol degradation genes from Pseudomonas sp. strain B13 to Pseudomonas putida F1 and to indigenous bacteria in laboratory-scale activated-sludge microcosms.
Applied and environmental microbiology 1998;64(6):2126-32.
1998: JH Leveau; Alexander J B Zehnder; Jan Roelof van der Meer
The tfdK gene product facilitates uptake of 2,4-dichlorophenoxyacetate by Ralstonia eutropha JMP134(pJP4).
Journal of bacteriology 1998;180(8):2237-43.
1997: JH Leveau; Jan Roelof van der Meer
Genetic characterization of insertion sequence ISJP4 on plasmid pJP4 from Ralstonia eutropha JMP134.
Gene 1997;202(1-2):103-14.
1997: B Baumann; Jan Roelof van der Meer; M Snozzi; Alexander J B Zehnder
Inhibition of denitrification activity but not of mRNA induction in Paracoccus denitrificans by nitrite at a suboptimal pH.
Antonie van Leeuwenhoek 1997;72(3):183-9.
1997: P Sticher; Marco C M Jaspers; K Stemmler; Hauke Harms; Alexander J B Zehnder; Jan Roelof van der Meer
Development and characterization of a whole-cell bioluminescent sensor for bioavailable middle-chain alkanes in contaminated groundwater samples.
Applied and environmental microbiology 1997;63(10):4053-60.
1997: Jan Roelof van der Meer
Evolution of novel metabolic pathways for the degradation of chloroaromatic compounds.
Antonie van Leeuwenhoek 1997;71(1-2):159-78.
1996: JH Leveau; Jan Roelof van der Meer
The tfdR gene product can successfully take over the role of the insertion element-inactivated TfdT protein as a transcriptional activator of the tfdCDEF gene cluster, which encodes chlorocatechol degradation in Ralstonia eutropha JMP134(pJP4)
Journal of bacteriology 1996;178(23):6824-32.
1996: H R Knobel; Thomas Egli; Jan Roelof van der Meer
Cloning and characterization of the genes encoding nitrilotriacetate monooxygenase of Chelatobacter heintzii ATCC 29600.
Journal of bacteriology 1996;178(21):6123-32.
1996: B Baumann; M Snozzi; Alexander J B Zehnder; Jan Roelof van der Meer
Dynamics of denitrification activity of Paracoccus denitrificans in continuous culture during aerobic-anaerobic changes.
Journal of bacteriology 1996;178(15):4367-74.
1996: Christoph Werlen; Hans-Peter E Kohler; Jan Roelof van der Meer
The broad substrate chlorobenzene dioxygenase and cis-chlorobenzene dihydrodiol dehydrogenase of Pseudomonas sp. strain P51 are linked evolutionarily to the enzymes for benzene and toluene degradation.
The Journal of biological chemistry 1996;271(8):4009-16.
1994: JH Leveau; WILLEM DE VOS; Jan Roelof van der Meer
Analysis of the binding site of the LysR-type transcriptional activator TcbR on the tcbR and tcbC divergent promoter sequences.
Journal of bacteriology 1994;176(7):1850-6.
1992: Jan Roelof van der Meer; WILLEM DE VOS; S Harayama; Alexander J B Zehnder
Molecular mechanisms of genetic adaptation to xenobiotic compounds.
Microbiological reviews 1992;56(4):677-94.
1991: Jan Roelof van der Meer; Alexander J B Zehnder; WILLEM DE VOS
Identification of a novel composite transposable element, Tn5280, carrying chlorobenzene dioxygenase genes of Pseudomonas sp. strain P51.
Journal of bacteriology 1991;173(22):7077-83.
1991: Jan Roelof van der Meer; A Frijters; JH Leveau; R I Eggen; Alexander J B Zehnder; WILLEM DE VOS
Characterization of the Pseudomonas sp. strain P51 gene tcbR, a LysR-type transcriptional activator of the tcbCDEF chlorocatechol oxidative operon, and analysis of the regulatory region.
Journal of bacteriology 1991;173(12):3700-8.
1991: Jan Roelof van der Meer; R I Eggen; Alexander J B Zehnder; WILLEM DE VOS
Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates.
Journal of bacteriology 1991;173(8):2425-34.
1991: Jan Roelof van der Meer; A R van Neerven; E J de Vries; WILLEM DE VOS; Alexander J B Zehnder
Cloning and characterization of plasmid-encoded genes for the degradation of 1,2-dichloro-, 1,4-dichloro-, and 1,2,4-trichlorobenzene of Pseudomonas sp. strain P51.
Journal of bacteriology 1991;173(1):6-15.