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Timothy Veenstra
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81
Conrads, Thomas
53
Issaq, Haleem
29
Yu, Li-Rong
26
Blonder, Josip
24
Lucas, David
23
Chan, King
17
Zhou, Ming
14
Petricoin, Emanuel
14
Liotta, Lance
11
Hood, Brian
11
Xu, Xia
10
Prieto, DaRue
9
Xiao, Zhen
9
Janini, George
7
Morrison, Richard
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All Publications
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2009: Ye Xiaoying; Johann Donald J; Hakami Ramin M; Xiao Zhen; Meng Zhaojing; Ulrich Robert G; Issaq Haleem J; Veenstra Timothy D; Blonder Josip
Optimization of protein solubilization for the analysis of the CD14 human monocyte membrane proteome using LC-MS/MS.
Journal of proteomics 2009;73(1):112-22.
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2009: Fuhrman Barbara J; Pfeiffer Ruth; Xu Xia; Wu Anna H; Korde Larissa; Gail Mitchell H; Keefer Larry K; Veenstra Timothy D; Hoover Robert N; Ziegler Regina G
Soy intake is associated with increased 2-hydroxylation and decreased 16alpha-hydroxylation of estrogens in Asian-American women.
Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2009;18(10):2751-60.
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2009: Simkus Carrie; Bhattacharyya Anamika; Zhou Ming; Veenstra Timothy D; Jones Jessica M
Correlation between recombinase activating gene 1 ubiquitin ligase activity and V(D)J recombination.
Immunology 2009;128(2):206-17.
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2009: Zofall Martin; Fischer Tamás; Zhang Ke; Zhou Ming; Cui Bowen; Veenstra Timothy D; Grewal Shiv I S
Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs.
Nature 2009;461(7262):419-22.
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2009: Issaq Haleem J; Van Que N; Waybright Timothy J; Muschik Gary M; Veenstra Timothy D
Analytical and statistical approaches to metabolomics research.
Journal of separation science 2009;32(13):2183-99.
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2009: Rone Malena B; Liu Jun; Blonder Josip; Ye Xiaoying; Veenstra Timothy D; Young Jason C; Papadopoulos Vassilios
Targeting and insertion of the cholesterol-binding translocator protein into the outer mitochondrial membrane.
Biochemistry 2009;48(29):6909-20.
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2009: Millet Caroline; Yamashita Motozo; Heller Mary; Yu Li-Rong; Veenstra Timothy D; Zhang Ying E
A negative feedback control of transforming growth factor-beta signaling by glycogen synthase kinase 3-mediated Smad3 linker phosphorylation at Ser-204.
The Journal of biological chemistry 2009;284(30):19808-16.
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2009: Dougherty Michele K; Ritt Daniel A; Zhou Ming; Specht Suzanne I; Monson Daniel M; Veenstra Timothy D; Morrison Deborah K
KSR2 is a calcineurin substrate that promotes ERK cascade activation in response to calcium signals.
Molecular cell 2009;34(6):652-62.
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2009: Fischer Tamás; Cui Bowen; Dhakshnamoorthy Jothy; Zhou Ming; Rubin Chanan; Zofall Martin; Veenstra Timothy D; Grewal Shiv I S
Diverse roles of HP1 proteins in heterochromatin assembly and functions in fission yeast.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(22):8998-9003.
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2009: Waybright Timothy J; Veenstra Timothy D
Bringing protein biomarker discovery to the clinic.
Expert review of molecular diagnostics 2009;9(4):305-7.
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2009: Farlow Daniel W; Xu Xia; Veenstra Timothy D
Quantitative measurement of endogenous estrogen metabolites, risk-factors for development of breast cancer, in commercial milk products by LC-MS/MS.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 2009;877(13):1327-34.
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2009: Soung Nak-Kyun; Park Jung-Eun; Yu Li-Rong; Lee Kyung H; Lee Jung-Min; Bang Jeong K; Veenstra Timothy D; Rhee Kunsoo; Lee Kyung S
Plk1-dependent and -independent roles of an ODF2 splice variant, hCenexin1, at the centrosome of somatic cells.
Developmental cell 2009;16(4):539-50.
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2009: Xu Kexin; Shimelis Hermela; Linn Douglas E; Jiang Richeng; Yang Xi; Sun Feng; Guo Zhiyong; Chen Hege; Li Wei; Chen Hegang; Kong Xiangtian; Melamed Jonathan; Fang Shengyun; Xiao Zhen; Veenstra Timothy D; Qiu Yun
Regulation of androgen receptor transcriptional activity and specificity by RNF6-induced ubiquitination.
Cancer cell 2009;15(4):270-82.
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2009: Blonder Josip; Veenstra Timothy D
Clinical proteomic applications of formalin-fixed paraffin-embedded tissues.
Clinics in laboratory medicine 2009;29(1):101-13.
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2009: Uo Takuma; Veenstra Timothy D; Morrison Richard S
Histone deacetylase inhibitors prevent p53-dependent and p53-independent Bax-mediated neuronal apoptosis through two distinct mechanisms.
The Journal of neuroscience : the official journal of the Society for Neuroscience 2009;29(9):2824-32.
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2009: Issaq Haleem J; Chan King C; Blonder Josip; Ye Xiaoying; Veenstra Timothy D
Separation, detection and quantitation of peptides by liquid chromatography and capillary electrochromatography.
Journal of chromatography. A 2009;1216(10):1825-37.
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2009: Ye Xiaoying; Blonder Josip; Veenstra Timothy D
Targeted proteomics for validation of biomarkers in clinical samples.
Briefings in functional genomics & proteomics 2009;8(2):126-35.
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2009: Xiao Zhen; Blonder Josip; Zhou Ming; Veenstra Timothy D
Proteomic analysis of extracellular matrix and vesicles.
Journal of proteomics 2009;72(1):34-45.
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2009: Masood M Athar; Xu Xia; Acharya Jairaj K; Veenstra Timothy D; Blonder Josip
Enhanced detection of sphingoid bases via divalent ruthenium bipyridine complex derivatization and electrospray ionization tandem mass spectrometry.
Analytical chemistry 2009;81(1):495-502.
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2009: Veenstra Timothy D
Using a global proteomic approach to identify proteins affected by estrogen therapy.
Genome medicine 2009;1(6):58.
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2008: Mi Lixin; Xiao Zhen; Hood Brian L; Dakshanamurthy Sivanesan; Wang Xiantao; Govind Sudha; Conrads Thomas P; Veenstra Timothy D; Chung Fung-Lung
Covalent binding to tubulin by isothiocyanates. A mechanism of cell growth arrest and apoptosis.
The Journal of biological chemistry 2008;283(32):22136-46.
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2008: Xu Xia; Othman Essam El-Dine R; Issaq Haleem J; Hornung Daniela; Al-Hendy Ayman; Veenstra Timothy D
Multiplexed quantitation of endogenous estrogens and estrogen metabolites in human peritoneal fluid.
Electrophoresis 2008;29(12):2706-13.
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2008: Issaq Haleem J; Nativ Ofer; Waybright Timothy; Luke Brian; Veenstra Timothy D; Issaq Elias J; Kravstov Alexander; Mullerad Michael
Detection of bladder cancer in human urine by metabolomic profiling using high performance liquid chromatography/mass spectrometry.
The Journal of urology 2008;179(6):2422-6.
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2008: Issaq Haleem J; Abbott Eric; Veenstra Timothy D
Utility of separation science in metabolomic studies.
Journal of separation science 2008;31(11):1936-47.
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2008: Abbott Eric; Veenstra Timothy D; Issaq Haleem J
Clinical and pharmaceutical applications of packed-column supercritical fluid chromatography.
Journal of separation science 2008;31(8):1223-30.
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2008: Meng Ling-Hua; Meng Zhaojing; Miao Ze-Hong; Veenstra Timothy D; Pommier Yves
Cytokeratin-RNA cross-linking mediated by the antitumor aminoflavone, 5-amino-2,3-fluorophenyl-6,8-difluoro-7-methyl-4H-1-benzopyran-4-one.
The Journal of pharmacology and experimental therapeutics 2008;325(2):674-80.
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2008: Veenstra Timothy D; Marcus Katrin
Multidimensional advancement of neuroproteomics.
Expert review of proteomics 2008;5(2):149-51.
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2008: Prieto DaRue A; Ye Xiaoying; Veenstra Timothy D
Proteomic analysis of traumatic brain injury: the search for biomarkers.
Expert review of proteomics 2008;5(2):283-91.
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2008: Park Chong J; Park Jung-Eun; Karpova Tatiana S; Soung Nak-Kyun; Yu Li-Rong; Song Sukgil; Lee Kyung H; Xia Xue; Kang Eugene; Dabanoglu Ilknur; Oh Doo-Yi; Zhang James Y; Kang Young Hwi; Wincovitch Stephen; Huffaker Tim C; Veenstra Timothy D; McNally James G; Lee Kyung S
Requirement for the budding yeast polo kinase Cdc5 in proper microtubule growth and dynamics.
Eukaryotic cell 2008;7(3):444-53.
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2008: Patel Vyomesh; Hood Brian L; Molinolo Alfredo A; Lee Norman H; Conrads Thomas P; Braisted John C; Krizman David B; Veenstra Timothy D; Gutkind J Silvio
Proteomic analysis of laser-captured paraffin-embedded tissues: a molecular portrait of head and neck cancer progression.
Clinical cancer research : an official journal of the American Association for Cancer Research 2008;14(4):1002-14.
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2008: Lee Jong Heun; Horak Christine E; Khanna Chand; Meng Zhaojing; Yu Li Rong; Veenstra Timothy D; Steeg Patricia S
Alterations in Gemin5 expression contribute to alternative mRNA splicing patterns and tumor cell motility.
Cancer research 2008;68(3):639-44.
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2008: Fowler Carol B; Cunningham Robert E; Waybright Timothy J; Blonder Josip; Veenstra Timothy D; O'Leary Timothy J; Mason Jeffrey T
Elevated hydrostatic pressure promotes protein recovery from formalin-fixed, paraffin-embedded tissue surrogates.
Laboratory investigation; a journal of technical methods and pathology 2008;88(2):185-95.
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2008: Van Que N; Issaq Haleem J; Jiang Qiujie; Li Qiaoli; Muschik Gary M; Waybright Timothy J; Lou Hong; Dean Michael; Uitto Jouni; Veenstra Timothy D
Comparison of 1D and 2D NMR spectroscopy for metabolic profiling.
Journal of proteome research 2008;7(2):630-9.
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2008: Stewart Nicolas A; Veenstra Timothy D
Sample preparation for mass spectrometry analysis of formalin-fixed paraffin-embedded tissue: proteomic analysis of formalin-fixed tissue.
Methods in molecular biology (Clifton, N.J.) 2008;425():131-8.
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2007: Tsai Yien Che; Mendoza Arnulfo; Mariano Jennifer M; Zhou Ming; Kostova Zlatka; Chen Bo; Veenstra Timothy; Hewitt Stephen M; Helman Lee J; Khanna Chand; Weissman Allan M
The ubiquitin ligase gp78 promotes sarcoma metastasis by targeting KAI1 for degradation.
Nature medicine 2007;13(12):1504-9.
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2007: Yu Li-Rong; Zhu Zhongyu; Chan King C; Issaq Haleem J; Dimitrov Dimiter S; Veenstra Timothy D
Improved titanium dioxide enrichment of phosphopeptides from HeLa cells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra.
Journal of proteome research 2007;6(11):4150-62.
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2007: Zhou Ming; Meng Zhaojing; Jobson Andrew G; Pommier Yves; Veenstra Timothy D
Detection of in vitro kinase generated protein phosphorylation sites using gamma[18O4]-ATP and mass spectrometry.
Analytical chemistry 2007;79(20):7603-10.
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2007: Xu Xia; Roman John M; Issaq Haleem J; Keefer Larry K; Veenstra Timothy D; Ziegler Regina G
Quantitative measurement of endogenous estrogens and estrogen metabolites in human serum by liquid chromatography-tandem mass spectrometry.
Analytical chemistry 2007;79(20):7813-21.
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2007: Yu Li-Rong; Veenstra Timothy D
AACR-FDA-NCI cancer biomarkers collaborative.
Expert review of molecular diagnostics 2007;7(5):507-9.
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2007: Zhou Ming; Veenstra Timothy D
Proteomic analysis of protein complexes.
Proteomics 2007;7(16):2688-97.
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2007: Issaq Haleem J; Xiao Zhen; Veenstra Timothy D
Serum and plasma proteomics.
Chemical reviews 2007;107(8):3601-20.
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2007: Mi Lixin; Wang Xiantao; Govind Sudha; Hood Brian L; Veenstra Timothy D; Conrads Thomas P; Saha Daniel T; Goldman Radoslav; Chung Fung-Lung
The role of protein binding in induction of apoptosis by phenethyl isothiocyanate and sulforaphane in human non-small lung cancer cells.
Cancer research 2007;67(13):6409-16.
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2007: Lakhani Nehal J; Sparreboom Alex; Xu Xia; Veenstra Timothy D; Venitz Jürgen; Dahut William L; Figg William D
Characterization of in vitro and in vivo metabolic pathways of the investigational anticancer agent, 2-methoxyestradiol.
Journal of pharmaceutical sciences 2007;96(7):1821-31.
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2007: Blonder Josip; Veenstra Timothy D
Computational prediction of proteotypic peptides.
Expert review of proteomics 2007;4(3):351-4.
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2007: Issaq Haleem J; Veenstra Timothy D
The role of electrophoresis in disease biomarker discovery.
Electrophoresis 2007;28(12):1980-8.
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2007: Chan King C; Patri Anil K; Veenstra Timothy D; McNeil Scott E; Issaq Haleem J
Analysis of fullerene-based nanomaterial in serum matrix by CE.
Electrophoresis 2007;28(10):1518-24.
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2007: Yu Li-Rong; Chan King C; Tahara Hidetoshi; Lucas David A; Chatterjee Koushik; Issaq Haleem J; Veenstra Timothy D
Quantitative proteomic analysis of human breast epithelial cells with differential telomere length.
Biochemical and biophysical research communications 2007;356(4):942-7.
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2007: Granville Courtney A; Warfel Noel; Tsurutani Junji; Hollander M Christine; Robertson Matthew; Fox Stephen D; Veenstra Timothy D; Issaq Haleem J; Linnoila R Ilona; Dennis Phillip A
Identification of a highly effective rapamycin schedule that markedly reduces the size, multiplicity, and phenotypic progression of tobacco carcinogen-induced murine lung tumors.
Clinical cancer research : an official journal of the American Association for Cancer Research 2007;13(7):2281-9.
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2007: Xiao Zhen; Camalier Corinne E; Nagashima Kunio; Chan King C; Lucas David A; de la Cruz M Jason; Gignac Michelle; Lockett Stephen; Issaq Haleem J; Veenstra Timothy D; Conrads Thomas P; Beck George R
Analysis of the extracellular matrix vesicle proteome in mineralizing osteoblasts.
Journal of cellular physiology 2007;210(2):325-35.
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2007: Veenstra Timothy D
Global and targeted quantitative proteomics for biomarker discovery.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 2007;847(1):3-11.
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2007: Bowen Cai; Stuart August; Ju Jeong-Ho; Tuan Jenny; Blonder Josip; Conrads Thomas P; Veenstra Timothy D; Gelmann Edward P
NKX3.1 homeodomain protein binds to topoisomerase I and enhances its activity.
Cancer research 2007;67(2):455-64.
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2007: Ritt Daniel A; Zhou Ming; Conrads Thomas P; Veenstra Timothy D; Copeland Terry D; Morrison Deborah K
CK2 Is a component of the KSR1 scaffold complex that contributes to Raf kinase activation.
Current biology : CB 2007;17(2):179-84.
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2007: Xu Xia; Keefer Larry K; Ziegler Regina G; Veenstra Timothy D
A liquid chromatography-mass spectrometry method for the quantitative analysis of urinary endogenous estrogen metabolites.
Nature protocols 2007;2(6):1350-5.
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2006: Zhou Ming; Veenstra Timothy D
Multiplexed immunofluorescence microscopy for the interrogation of cellular protein complexes.
Expert review of proteomics 2006;3(6):581-3.
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2006: Conrads Thomas P; Tocci Gillian M; Hood Brian L; Zhang Chen-Ou; Guo Li; Koch Kristopher R; Michejda Christopher J; Veenstra Timothy D; Keay Susan K
CKAP4/p63 is a receptor for the frizzled-8 protein-related antiproliferative factor from interstitial cystitis patients.
The Journal of biological chemistry 2006;281(49):37836-43.
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2006: Kang Young H; Park Jung-Eun; Yu Li-Rong; Soung Nak-Kyun; Yun Sang-Moon; Bang Jeong K; Seong Yeon-Sun; Yu Hongtao; Garfield Susan; Veenstra Timothy D; Lee Kyung S
Self-regulated Plk1 recruitment to kinetochores by the Plk1-PBIP1 interaction is critical for proper chromosome segregation.
Molecular cell 2006;24(3):409-22.
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2006: Stockwin Luke H; Blonder Josip; Bumke Maja A; Lucas David A; Chan King C; Conrads Thomas P; Issaq Haleem J; Veenstra Timothy D; Newton Dianne L; Rybak Susanna M
Proteomic analysis of plasma membrane from hypoxia-adapted malignant melanoma.
Journal of proteome research 2006;5(11):2996-3007.
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2006: Blonder Josip; Xiao Zhen; Veenstra Timothy D
Proteomic profiling of differentiating osteoblasts.
Expert review of proteomics 2006;3(5):483-96.
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2006: Guo Zhiyong; Dai Bojie; Jiang Tianyun; Xu Kexin; Xie Yingqiu; Kim Oekyung; Nesheiwat Issa; Kong Xiangtian; Melamed Jonathan; Handratta Venkatesh D; Njar Vincent C O; Brodie Angela M H; Yu Li-Rong; Veenstra Timothy D; Chen Hegang; Qiu Yun
Regulation of androgen receptor activity by tyrosine phosphorylation.
Cancer cell 2006;10(4):309-19.
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2006: Habermann Jens K; Roblick Uwe J; Luke Brian T; Prieto Darue A; Finlay William J J; Podust Vladimir N; Roman John M; Oevermann Elisabeth; Schiedeck Thomas; Homann Nils; Duchrow Michael; Conrads Thomas P; Veenstra Timothy D; Burt Stanley K; Bruch Hans-Peter; Auer Gert; Ried Thomas
Increased serum levels of complement C3a anaphylatoxin indicate the presence of colorectal tumors.
Gastroenterology 2006;131(4):1020-9; quiz 1284.
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2006: Zhou Ming; Prieto DaRue A; Lucas David A; Chan King C; Issaq Haleem J; Veenstra Timothy D; Conrads Thomas P
Identification of the SELDI ProteinChip human serum retentate by microcapillary liquid chromatography-tandem mass spectrometry.
Journal of proteome research 2006;5(9):2207-16.
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2006: Chertova Elena; Chertov Oleg; Coren Lori V; Roser James D; Trubey Charles M; Bess Julian W; Sowder Raymond C; Barsov Eugene; Hood Brian L; Fisher Robert J; Nagashima Kunio; Conrads Thomas P; Veenstra Timothy D; Lifson Jeffrey D; Ott David E
Proteomic and biochemical analysis of purified human immunodeficiency virus type 1 produced from infected monocyte-derived macrophages.
Journal of virology 2006;80(18):9039-52.
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2006: Asano Satoshi; Park Jung-Eun; Yu Li-Rong; Zhou Ming; Sakchaisri Krisada; Park Chong J; Kang Young H; Thorner Jeremy; Veenstra Timothy D; Lee Kyung S
Direct phosphorylation and activation of a Nim1-related kinase Gin4 by Elm1 in budding yeast.
The Journal of biological chemistry 2006;281(37):27090-8.
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2006: Meng Zhaojing; Camalier Corinne E; Lucas David A; Veenstra Timothy D; Beck George R; Conrads Thomas P
Probing early growth response 1 interacting proteins at the active promoter in osteoblast cells using oligoprecipitation and mass spectrometry.
Journal of proteome research 2006;5(8):1931-9.
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2006: Murphy Siun; Larrivée Bruno; Pollet Ingrid; Craig Kyle S; Williams David E; Huang Xin-Hui; Abbott Megan; Wong Fred; Curtis Cameron; Conrads Thomas P; Veenstra Timothy; Puri Mira; Hsiang York; Roberge Michel; Andersen Raymond J; Karsan Aly
Identification of sokotrasterol sulfate as a novel proangiogenic steroid.
Circulation research 2006;99(3):257-65.
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2006: Yang Haiyan; Yu Li-Rong; Yi Ming; Lucas David A; Lukes Luanne; Lancaster Mindy; Chan King C; Issaq Haleem J; Stephens Robert M; Conrads Thomas P; Veenstra Timothy D; Hunter Kent W
Parallel analysis of transcript and translation profiles: identification of metastasis-related signal pathways differentially regulated by drug and genetic modifications.
Journal of proteome research 2006;5(7):1555-67.
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2006: Hood Brian L; Conrads Thomas P; Veenstra Timothy D
Mass spectrometric analysis of formalin-fixed paraffin-embedded tissue: unlocking the proteome within.
Proteomics 2006;6(14):4106-14.
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2006: Hood Brian L; Conrads Thomas P; Veenstra Timothy D
Unravelling the proteome of formalin-fixed paraffin-embedded tissue.
Briefings in functional genomics & proteomics 2006;5(2):169-75.
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2006: Ali Iqbal Unnisa; Xiao Zhen; Malone Winfred; Smith Mylinh; Conrads Thomas P; Veenstra Timothy D; Greenwald Peter; Luke Brian T; McLarty Jerry W
Plasma proteomic profiling: search for lung cancer diagnostic and early detection markers.
Oncology reports 2006;15(5):1367-72.
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2006: Xu Xia; Roman John M; Veenstra Timothy D; Van Anda Jennifer; Ziegler Regina G; Issaq Haleem J
Analysis of fifteen estrogen metabolites using packed column supercritical fluid chromatography-mass spectrometry.
Analytical chemistry 2006;78(5):1553-8.
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2006: Kong Li; Saavedra Joseph E; Buzard Gregory S; Xu Xia; Hood Brian L; Conrads Thomas P; Veenstra Timothy D; Keefer Larry K
Deamidation of peptides in aerobic nitric oxide solution by a nitrosative pathway.
Nitric oxide : biology and chemistry / official journal of the Nitric Oxide Society 2006;14(2):144-51.
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2006: Blonder Josip; Yu Li-Rong; Radeva Galina; Chan King C; Lucas David A; Waybright Timothy J; Issaq Haleem J; Sharom Frances J; Veenstra Timothy D
Combined chemical and enzymatic stable isotope labeling for quantitative profiling of detergent-insoluble membrane proteins isolated using Triton X-100 and Brij-96.
Journal of proteome research 2006;5(2):349-60.
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2006: Hara T; Abe M; Inoue H; Yu L-R; Veenstra T D; Kang Y H; Lee K S; Miki T
Cytokinesis regulator ECT2 changes its conformation through phosphorylation at Thr-341 in G2/M phase.
Oncogene 2006;25(4):566-78.
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2006: Blonder Josip; Chan King C; Issaq Haleem J; Veenstra Timothy D
Identification of membrane proteins from mammalian cell/tissue using methanol-facilitated solubilization and tryptic digestion coupled with 2D-LC-MS/MS.
Nature protocols 2006;1(6):2784-90.
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2005: Hood Brian L; Darfler Marlene M; Guiel Thomas G; Furusato Bungo; Lucas David A; Ringeisen Bradley R; Sesterhenn Isabell A; Conrads Thomas P; Veenstra Timothy D; Krizman David B
Proteomic analysis of formalin-fixed prostate cancer tissue.
Molecular & cellular proteomics : MCP 2005;4(11):1741-53.
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2005: Xu Xia; Veenstra Timothy D; Fox Stephen D; Roman John M; Issaq Haleem J; Falk Roni; Saavedra Joseph E; Keefer Larry K; Ziegler Regina G
Measuring fifteen endogenous estrogens simultaneously in human urine by high-performance liquid chromatography-mass spectrometry.
Analytical chemistry 2005;77(20):6646-54.
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2005: Conrads Thomas P; Hood Brian L; Petricoin Emmanuel F; Liotta Lance A; Veenstra Timothy D
Cancer proteomics: many technologies, one goal.
Expert review of proteomics 2005;2(5):693-703.
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2005: Lowenthal Mark S; Mehta Arpita I; Frogale Kristina; Bandle Russell W; Araujo Robyn P; Hood Brian L; Veenstra Timothy D; Conrads Thomas P; Goldsmith Paul; Fishman David; Petricoin Emanuel F; Liotta Lance A
Analysis of albumin-associated peptides and proteins from ovarian cancer patients.
Clinical chemistry 2005;51(10):1933-45.
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2005: Hood Brian L; Zhou Ming; Chan King C; Lucas David A; Kim Grace J; Issaq Haleem J; Veenstra Timothy D; Conrads Thomas P
Investigation of the mouse serum proteome.
Journal of proteome research 2005;4(5):1561-8.
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2005: Conrads Kelly A; Yi Ming; Simpson Kerri A; Lucas David A; Camalier Corinne E; Yu Li-Rong; Veenstra Timothy D; Stephens Robert M; Conrads Thomas P; Beck George R
A combined proteome and microarray investigation of inorganic phosphate-induced pre-osteoblast cells.
Molecular & cellular proteomics : MCP 2005;4(9):1284-96.
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2005: Hood Brian L; Lucas David A; Kim Grace; Chan King C; Blonder Josip; Issaq Haleem J; Veenstra Timothy D; Conrads Thomas P; Pollet Ingrid; Karsan Aly
Quantitative analysis of the low molecular weight serum proteome using 18O stable isotope labeling in a lung tumor xenograft mouse model.
Journal of the American Society for Mass Spectrometry 2005;16(8):1221-30.
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2005: Karsan Aly; Eigl Bernhard J; Flibotte Stephane; Gelmon Karen; Switzer Philip; Hassell Patricia; Harrison Dorothy; Law Jennifer; Hayes Malcolm; Stillwell Moira; Xiao Zhen; Conrads Thomas P; Veenstra Timothy
Analytical and preanalytical biases in serum proteomic pattern analysis for breast cancer diagnosis.
Clinical chemistry 2005;51(8):1525-8.
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2005: Prieto DaRue A; Hood Brian L; Darfler Marlene M; Guiel Thomas G; Lucas David A; Conrads Thomas P; Veenstra Timothy D; Krizman David B
Liquid Tissue: proteomic profiling of formalin-fixed tissues.
BioTechniques 2005;Suppl():32-5.
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2005: Brouwers F M; Petricoin E F; Ksinantova L; Breza J; Rajapakse V; Ross S; Johann D; Mannelli M; Shulkin B L; Kvetnansky R; Eisenhofer G; Walther M M; Hitt B A; Conrads T P; Veenstra T D; Mannion D P; Wall M R; Wolfe G M; Fusaro V A; Liotta L A; Pacak K
Low molecular weight proteomic information distinguishes metastatic from benign pheochromocytoma.
Endocrine-related cancer 2005;12(2):263-72.
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2005: Asano Satoshi; Park Jung-Eun; Sakchaisri Krisada; Yu Li-Rong; Song Sukgil; Supavilai Porntip; Veenstra Timothy D; Lee Kyung S
Concerted mechanism of Swe1/Wee1 regulation by multiple kinases in budding yeast.
The EMBO journal 2005;24(12):2194-204.
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2005: Zhou Ming; Conrads Thomas P; Veenstra Timothy D
Proteomics approaches to biomarker detection.
Briefings in functional genomics & proteomics 2005;4(1):69-75.
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2005: Veenstra Timothy D; Conrads Thomas P; Hood Brian L; Avellino Anthony M; Ellenbogen Richard G; Morrison Richard S
Biomarkers: mining the biofluid proteome.
Molecular & cellular proteomics : MCP 2005;4(4):409-18.
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2005: Blonder Josip; Hale Martha L; Chan King C; Yu Li-Rong; Lucas David A; Conrads Thomas P; Zhou Ming; Popoff Michel R; Issaq Haleem J; Stiles Bradley G; Veenstra Timothy D
Quantitative profiling of the detergent-resistant membrane proteome of iota-b toxin induced vero cells.
Journal of proteome research 2005;4(2):523-31.
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2005: Karsan Aly; Blonder Josip; Law Jennifer; Yaquian Elisa; Lucas David A; Conrads Thomas P; Veenstra Timothy
Proteomic analysis of lipid microdomains from lipopolysaccharide-activated human endothelial cells.
Journal of proteome research 2005;4(2):349-57.
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2005: Fox Stephen D; Roman John M; Cizza Giovanni; Veenstra Timothy D; Issaq Haleem J
Quantitative determination of antalarmin, a novel corticotropin-releasing hormone receptor-1 antagonist, in canine plasma by HPLC-MS.
Journal of separation science 2005;28(4):332-6.
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2005: Issaq Haleem J; Chan King C; Janini George M; Conrads Thomas P; Veenstra Timothy D
Multidimensional separation of peptides for effective proteomic analysis.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 2005;817(1):35-47.
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2005: Liotta Lance A; Lowenthal Mark; Mehta Arpita; Conrads Thomas P; Veenstra Timothy D; Fishman David A; Petricoin Emanuel F
Importance of communication between producers and consumers of publicly available experimental data.
Journal of the National Cancer Institute 2005;97(4):310-4.
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2005: Karsan Aly; Pollet Ingrid; Yu Li-Rong; Chan King C; Conrads Thomas P; Lucas David A; Andersen Raymond; Veenstra Timothy
Quantitative proteomic analysis of sokotrasterol sulfate-stimulated primary human endothelial cells.
Molecular & cellular proteomics : MCP 2005;4(2):191-204.
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2005: Chertov Oleg; Simpson John T; Biragyn Arya; Conrads Thomas P; Veenstra Timothy D; Fisher Robert J
Enrichment of low-molecular-weight proteins from biofluids for biomarker discovery.
Expert review of proteomics 2005;2(1):139-45.
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2005: Xiao Zhen; Prieto DaRue; Conrads Thomas P; Veenstra Timothy D; Issaq Haleem J
Proteomic patterns: their potential for disease diagnosis.
Molecular and cellular endocrinology 2005;230(1-2):95-106.
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2005: Dougherty Michele K; Müller Jürgen; Ritt Daniel A; Zhou Ming; Zhou Xiao Zhen; Copeland Terry D; Conrads Thomas P; Veenstra Timothy D; Lu Kun Ping; Morrison Deborah K
Regulation of Raf-1 by direct feedback phosphorylation.
Molecular cell 2005;17(2):215-24.
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2005: Johnson Mark D; Yu Li-Rong; Conrads Thomas P; Kinoshita Yoshito; Uo Takuma; McBee Joshua K; Veenstra Timothy D; Morrison Richard S
The proteomics of neurodegeneration.
American journal of pharmacogenomics : genomics-related research in drug development and clinical practice 2005;5(4):259-70.
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2004: Issaq Haleem J; Janini George M; Chan King C; Veenstra Timothy D
Sheathless electrospray ionization interfaces for capillary electrophoresis-mass spectrometric detection advantages and limitations.
Journal of chromatography. A 2004;1053(1-2):37-42.
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2004: Veenstra Timothy D; Prieto Darue A; Conrads Thomas P
Proteomic patterns for early cancer detection.
Drug discovery today 2004;9(20):889-97.
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2004: Xu Xia; Keefer Larry K; Waterhouse David J; Saavedra Joseph E; Veenstra Timothy D; Ziegler Regina G
Measuring seven endogenous ketolic estrogens simultaneously in human urine by high-performance liquid chromatography-mass spectrometry.
Analytical chemistry 2004;76(19):5829-36.
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2004: Blonder Josip; Terunuma Atsushi; Conrads Thomas P; Chan King C; Yee Carole; Lucas David A; Schaefer Carl F; Yu Li-Rong; Issaq Haleem J; Veenstra Timothy D; Vogel Jonathan C
A proteomic characterization of the plasma membrane of human epidermis by high-throughput mass spectrometry.
The Journal of investigative dermatology 2004;123(4):691-9.
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2004: Ornstein David K; Rayford Walter; Fusaro Vincent A; Conrads Thomas P; Ross Sally J; Hitt Ben A; Wiggins Wesley W; Veenstra Timothy D; Liotta Lance A; Petricoin Emanuel F
Serum proteomic profiling can discriminate prostate cancer from benign prostates in men with total prostate specific antigen levels between 2.5 and 15.0 ng/ml.
The Journal of urology 2004;172(4 Pt 1):1302-5.
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2004: Yu Li-Rong; Conrads Thomas P; Uo Takuma; Kinoshita Yoshito; Morrison Richard S; Lucas David A; Chan King C; Blonder Josip; Issaq Haleem J; Veenstra Timothy D
Global analysis of the cortical neuron proteome.
Molecular & cellular proteomics : MCP 2004;3(9):896-907.
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2004: Blonder Josip; Conrads Thomas P; Veenstra Timothy D
Characterization and quantitation of membrane proteomes using multidimensional MS-based proteomic technologies.
Expert review of proteomics 2004;1(2):153-63.
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2004: Keay Susan K; Szekely Zoltan; Conrads Thomas P; Veenstra Timothy D; Barchi Joseph J; Zhang Chen-Ou; Koch Kristopher R; Michejda Christopher J
An antiproliferative factor from interstitial cystitis patients is a frizzled 8 protein-related sialoglycopeptide.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(32):11803-8.
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2004: Petricoin Emanuel F; Fishman David A; Conrads Thomas P; Veenstra Timothy D; Liotta Lance A
Lessons from Kitty Hawk: from feasibility to routine clinical use for the field of proteomic pattern diagnostics.
Proteomics 2004;4(8):2357-60.
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2004: Blonder Josip; Rodriguez-Galan Maria C; Chan King C; Lucas David A; Yu Li-Rong; Conrads Thomas P; Issaq Haleem J; Young Howard A; Veenstra Timothy D
Analysis of murine natural killer cell microsomal proteins using two-dimensional liquid chromatography coupled to tandem electrospray ionization mass spectrometry.
Journal of proteome research 2004;3(4):862-70.
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2004: Janini George M; Chan King C; Conrads Thomas P; Issaq Haleem J; Veenstra Timothy D
Two-dimensional liquid chromatography-capillary zone electrophoresis-sheathless electrospray ionization-mass spectrometry: evaluation for peptide analysis and protein identification.
Electrophoresis 2004;25(13):1973-80.
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2004: Johann Donald J; McGuigan Michael D; Patel Amit R; Tomov Stanimire; Ross Sally; Conrads Thomas P; Veenstra Timothy D; Fishman David A; Whiteley Gordon R; Petricoin Emanuel F; Liotta Lance A
Clinical proteomics and biomarker discovery.
Annals of the New York Academy of Sciences 2004;1022():295-305.
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2004: Conrads T P; Fusaro V A; Ross S; Johann D; Rajapakse V; Hitt B A; Steinberg S M; Kohn E C; Fishman D A; Whitely G; Barrett J C; Liotta L A; Petricoin E F; Veenstra T D
High-resolution serum proteomic features for ovarian cancer detection.
Endocrine-related cancer 2004;11(2):163-78.
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2004: Johnson Mark D; Yu Li-Rong; Conrads Thomas P; Kinoshita Yoshito; Uo Takuma; Matthews Jesse D; Lee Sang-Won; Smith Richard D; Veenstra Timothy D; Morrison Richard S
Proteome analysis of DNA damage-induced neuronal death using high throughput mass spectrometry.
The Journal of biological chemistry 2004;279(25):26685-97.
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2004: Yu Li-Rong; Conrads Thomas P; Uo Takuma; Issaq Haleem J; Morrison Richard S; Veenstra Timothy D
Evaluation of the acid-cleavable isotope-coded affinity tag reagents: application to camptothecin-treated cortical neurons.
Journal of proteome research 2004;3(3):469-77.
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2004: Conrads Kelly A; Yu Li-Rong; Lucas David A; Zhou Ming; Chan King C; Simpson Kerri A; Schaefer Carl F; Issaq Haleem J; Veenstra Timothy D; Beck George R; Conrads Thomas P
Quantitative proteomic analysis of inorganic phosphate-induced murine MC3T3-E1 osteoblast cells.
Electrophoresis 2004;25(9):1342-52.
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2004: Blonder Josip; Hale Martha L; Lucas David A; Schaefer Carl F; Yu Li-Rong; Conrads Thomas P; Issaq Haleem J; Stiles Bradley G; Veenstra Timothy D
Proteomic analysis of detergent-resistant membrane rafts.
Electrophoresis 2004;25(9):1307-18.
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2004: Zhou Ming; Lucas David A; Chan King C; Issaq Haleem J; Petricoin Emanuel F; Liotta Lance A; Veenstra Timothy D; Conrads Thomas P
An investigation into the human serum "interactome".
Electrophoresis 2004;25(9):1289-98.
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2004: Veenstra Timothy D; Conrads Thomas P; Issaq Haleem J
What to do with "one-hit wonders"?
Electrophoresis 2004;25(9):1278-9.
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2004: Xiao Zhen; Luke Brian T; Izmirlian Grant; Umar Asad; Lynch Patrick M; Phillips Robin K S; Patterson Sherri; Conrads Thomas P; Veenstra Timothy D; Greenwald Peter; Hawk Ernest T; Ali Iqbal U
Serum proteomic profiles suggest celecoxib-modulated targets and response predictors.
Cancer research 2004;64(8):2904-9.
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2004: Blonder Josip; Rodriguez-Galan Maria Cecilia; Lucas David A; Young Howard A; Issaq Haleem J; Veenstra Timothy D; Conrads Thomas P
Proteomic investigation of natural killer cell microsomes using gas-phase fractionation by mass spectrometry.
Biochimica et biophysica acta 2004;1698(1):87-95.
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2004: Chertov Oleg; Biragyn Arya; Kwak Larry W; Simpson John T; Boronina Tatiana; Hoang Van M; Prieto DaRue A; Conrads Thomas P; Veenstra Timothy D; Fisher Robert J
Organic solvent extraction of proteins and peptides from serum as an effective sample preparation for detection and identification of biomarkers by mass spectrometry.
Proteomics 2004;4(4):1195-203.
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2004: Petricoin Emanuel F; Rajapaske Vinodh; Herman Eugene H; Arekani Ali M; Ross Sally; Johann Donald; Knapton Alan; Zhang J; Hitt Ben A; Conrads Thomas P; Veenstra Timothy D; Liotta Lance A; Sistare Frank D
Toxicoproteomics: serum proteomic pattern diagnostics for early detection of drug induced cardiac toxicities and cardioprotection.
Toxicologic pathology 2004;32 Suppl 1():122-30.
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2004: Sakchaisri Krisada; Asano Satoshi; Yu Li-Rong; Shulewitz Mark J; Park Chong J; Park Jung-Eun; Cho Young-Wook; Veenstra Timothy D; Thorner Jeremy; Lee Kyung S
Coupling morphogenesis to mitotic entry.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(12):4124-9.
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2004: Conrads Thomas P; Veenstra Timothy D
The utility of proteomic patterns for the diagnosis of cancer.
Current drug targets. Immune, endocrine and metabolic disorders 2004;4(1):41-50.
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2004: Berman David M; Shih Ie-Ming; Burke Lorri-Anne; Veenstra Timothy D; Zhao Yingming; Conrads Thomas P; Kwon Sung Won; Hoang Van; Yu Li-Rong; Zhou Ming; Kurman Robert J; Petricoin Emanuel F; Liotta Lance A
Profiling the activity of G proteins in patient-derived tissues by rapid affinity-capture of signal transduction proteins (GRASP).
Proteomics 2004;4(3):812-8.
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2004: Blonder Josip; Conrads Thomas P; Yu Li-Rong; Terunuma Atsushi; Janini George M; Issaq Haleem J; Vogel Jonathan C; Veenstra Timothy D
A detergent- and cyanogen bromide-free method for integral membrane proteomics: application to Halobacterium purple membranes and the human epidermal membrane proteome.
Proteomics 2004;4(1):31-45.
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2004: Xiao Zhen; Conrads Thomas P; Lucas David A; Janini George M; Schaefer Carl F; Buetow Kenneth H; Issaq Haleem J; Veenstra Timothy D
Direct ampholyte-free liquid-phase isoelectric peptide focusing: application to the human serum proteome.
Electrophoresis 2004;25(1):128-33.
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2004: Yang Haiyan; Rouse Jessica; Lukes Luanne; Lancaster Mindy; Veenstra Timothy; Zhou Ming; Shi Ying; Park Yeong-Gwan; Hunter Kent
Caffeine suppresses metastasis in a transgenic mouse model: a prototype molecule for prophylaxis of metastasis.
Clinical & experimental metastasis 2004;21(8):719-35.
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2004: Conrads Thomas P; Hood Brian L; Issaq Haleem J; Veenstra Timothy D
Proteomic patterns as a diagnostic tool for early-stage cancer: a review of its progress to a clinically relevant tool.
Molecular diagnosis : a journal devoted to the understanding of human disease through the clinical application of molecular biology 2004;8(2):77-85.
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2003: Veenstra Timothy D; Conrads Thomas P
Serum protein fingerprinting.
Current opinion in molecular therapeutics 2003;5(6):584-93.
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2003: Hingorani Sunil R; Petricoin Emanuel F; Maitra Anirban; Rajapakse Vinodh; King Catrina; Jacobetz Michael A; Ross Sally; Conrads Thomas P; Veenstra Timothy D; Hitt Ben A; Kawaguchi Yoshiya; Johann Don; Liotta Lance A; Crawford Howard C; Putt Mary E; Jacks Tyler; Wright Christopher V E; Hruban Ralph H; Lowy Andrew M; Tuveson David A
Preinvasive and invasive ductal pancreatic cancer and its early detection in the mouse.
Cancer cell 2003;4(6):437-50.
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2003: Fox S D; Lempicki R A; Hosack D A; Baseler M W; Kovacs J A; Lane H C; Veenstra T D; Issaq H J
A comparison of microLC/electrospray ionization-MS and GC/MS for the measurement of stable isotope enrichment from a [2H2]-glucose metabolic probe in T-cell genomic DNA.
Analytical chemistry 2003;75(23):6517-22.
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2003: Janini George M; Zhou Ming; Yu Li-Rong; Blonder Josip; Gignac Michelle; Conrads Thomas P; Issaq Haleem J; Veenstra Timothy D
On-column sample enrichment for capillary electrophoresis sheathless electrospray ionization mass spectrometry: evaluation for peptide analysis and protein identification.
Analytical chemistry 2003;75(21):5984-93.
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2003: Tirumalai Radhakrishna S; Chan King C; Prieto DaRue A; Issaq Haleem J; Conrads Thomas P; Veenstra Timothy D
Characterization of the low molecular weight human serum proteome.
Molecular & cellular proteomics : MCP 2003;2(10):1096-103.
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2003: Macpherson Gordon R; Ng Sylvia S W; Forbes Siiri L; Melillo Giovanni; Karpova Tatiana; McNally James; Conrads Thomas P; Veenstra Timothy D; Martinez Alfredo; Cuttitta Frank; Price Douglas K; Figg William D
Anti-angiogenic activity of human endostatin is HIF-1-independent in vitro and sensitive to timing of treatment in a human saphenous vein assay.
Molecular cancer therapeutics 2003;2(9):845-54.
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2003: Hoang Van M; Conrads Thomas P; Veenstra Timothy D; Blonder Josip; Terunuma Atsushi; Vogel Jonathan C; Fisher Robert J
Quantitative proteomics employing primary amine affinity tags.
Journal of biomolecular techniques : JBT 2003;14(3):216-23.
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2003: Conrads Thomas P; Zhou Ming; Petricoin Emmanuel F; Liotta Lance; Veenstra Timothy D
Cancer diagnosis using proteomic patterns.
Expert review of molecular diagnostics 2003;3(4):411-20.
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2003: Janini George M; Conrads Thomas P; Wilkens Kenneth L; Issaq Haleem J; Veenstra Timothy D
A sheathless nanoflow electrospray interface for on-line capillary electrophoresis mass spectrometry.
Analytical chemistry 2003;75(7):1615-9.
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2003: Issaq Haleem J; Conrads Thomas P; Prieto DaRue A; Tirumalai Radhakrishna; Veenstra Timothy D
SELDI-TOF MS for diagnostic proteomics.
Analytical chemistry 2003;75(7):148A-155A.
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2003: Janini George M; Conrads Thomas P; Veenstra Timothy D; Issaq Haleem J
Development of a two-dimensional protein-peptide separation protocol for comprehensive proteome measurements.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 2003;787(1):43-51.
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2003: Van Que N; Chmurny Gwendolyn N; Veenstra Timothy D
The depletion of protein signals in metabonomics analysis with the WET-CPMG pulse sequence.
Biochemical and biophysical research communications 2003;301(4):952-9.
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2003: Yu Li-Rong; Zhou Ming; Conrads Thomas P; Veenstra Timothy D
Diagnostic proteomics: serum proteomic patterns for the detection of early stage cancers.
Disease markers 2003;19(4-5):209-18.
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2003: Johann Donald J; McGuigan Michael D; Tomov Stanimire; Fusaro Vincent A; Ross Sally; Conrads Thomas P; Veenstra Timothy D; Fishman David A; Whiteley Gordon R; Petricoin Emanuel F; Liotta Lance A
Novel approaches to visualization and data mining reveals diagnostic information in the low amplitude region of serum mass spectra from ovarian cancer patients.
Disease markers 2003;19(4-5):197-207.
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2003: Van Que N; Klose John R; Lucas David A; Prieto DaRue A; Luke Brian; Collins Jack; Burt Stanley K; Chmurny Gwendolyn N; Issaq Haleem J; Conrads Thomas P; Veenstra Timothy D; Keay Susan K
The use of urine proteomic and metabonomic patterns for the diagnosis of interstitial cystitis and bacterial cystitis.
Disease markers 2003;19(4-5):169-83.
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2003: Veenstra Timothy D
Proteome analysis of posttranslational modifications.
Advances in protein chemistry 2003;65():161-94.
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2002: Issaq Haleem J; Conrads Thomas P; Janini George M; Veenstra Timothy D
Methods for fractionation, separation and profiling of proteins and peptides.
Electrophoresis 2002;23(17):3048-61.
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2002: Morrison Richard S; Kinoshita Yoshito; Johnson Mark D; Uo Takuma; Ho Joseph T; McBee Joshua K; Conrads Thomas P; Veenstra Timothy D
Proteomic analysis in the neurosciences.
Molecular & cellular proteomics : MCP 2002;1(8):553-60.
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2002: Issaq Haleem J; Veenstra Timothy D; Conrads Thomas P; Felschow Donna
The SELDI-TOF MS approach to proteomics: protein profiling and biomarker identification.
Biochemical and biophysical research communications 2002;292(3):587-92.
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2002: Conrads Thomas P; Issaq Haleem J; Veenstra Timothy D
New tools for quantitative phosphoproteome analysis.
Biochemical and biophysical research communications 2002;290(3):885-90.
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